Rorug03G0306300

Zinc finger, ZZ type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0008857
Physical Location & Seq
Forward (+)
32491952 .. 32497585
5634 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0306300.1

Sequence Viewer

Length: 1506 bp
ATGGTGCTCTCCAAAACCGCATCGCAATCAGATGTCTCTGTCCACTCCACCTTCGCTTCGCGATACGTTCGAACTTCTCTTCCAAGGTTCAAAATGGGGGAGAACTCGATCCCGAAGGACGCAGCTTATCAGATCATAAACGACGAGCTGATGCTGGACGGAAATCCACGGCTGAACCTGGCATCGTTCGTGACGACGTGGATGGAGCCGGAATGCGATAAGCTCATTATGTCCTCCATCAACAAGAACTACGTCGATATGGATGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGCGTGAACATGATAGCTCATCTATTCAATGCACCACTCGGAGAATCAGAGGCGGCCGTTGGAGTCGGCACAGTAGGATCTTCCGAGGCCATCATGTTGGCCGGATTGGCATTCAAGAGGAGGTGGCAGAACAAGAGGAGAGCTGAGGGAAAACCGGTCGACAAGCCCAACATTGTCACCGGAGCCAATGTTCAGGTGTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGTTGAGGGATGATTACTACGTAATGGACCCCGAGAAAGCTGTGGAGATGGTTGATGAGAACACCATCTGCGTTGCTGCTATCCTCGGTTCCACTCTCAATGGCGAGTTCGAAGACGTCAAGCGCTTGAATGATCTCCTGGTTGAGAAAAACCAGGAAACTGGATGGGATACTCCGATCCATGTAGACGCCGCGAGTGGTGGGTTCATTGCTCCGTTTTTATACCCAGAACTCGAGTGGGATTTCCGTTTGCCGCTGGTGAAGAGCATCAACGTGAGCGGGCACAAGTACGGACTTGTGTATGCCGGAATTGGGTGGGTCATTTGGAGGAACAAAGAGGACTTGCCTGAGGAGCTCATCTTCCATATCAACTACCTTGGAGCAGATCAACCTACCTTCACCCTCAATTTCTCTAAAGGATCCAGCCAAATTATTGCTCAGTATTACCAACTAATTCGCTTGGGTTATGAGGGATACAGGAACATCATGGAAAATTGTCATGACAATATGATTGTACTAAGAGAAGGACTCGAGAAGACAGGTCGCTTCAAGATCGTCTCCAAGGACGAGGGAGTACCTCTGGTGGCTTTTTCTCTCAAAGATAACCAATGCCACGATGAGTTTGAGATCGCTGATTTGTTGCGTCGCTACGGGTGGATTGTGCCAGCATACACTATGCCGGCAGATGCTCAGCATGTCACCGTGCTGCGTGTGGTCATCAGAGAAGACTTTTCTCACACTCTTGCTGAGCGCCTGGTCAATGACATCCAGAAAGTTCTGCATGAGCTCGACCACCTTCCATCAAAGCTCAGCTCCAACAGTTCCATTGAAAGCCAATCGGTTGAGAATAATGAGAAGTCCACCGTTACCATGAAGAAGAGTGCTATGGAGACACAGAGGGAAATCACTACCATTTGGAGGAAGTTTGTTATGGAGAAGAAGAAGATAACCGGTGTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ZZ zf-C3HC4_3 zf-C3HC4_4 zf-RING_UBOX

Protein Analysis

501

Amino Acids

56.99

Weight (kDa)

5.47

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyridoxal_deC PF00282 37 - 381 1.6e-105 Pyridoxal-dependent decarboxylase conserved domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 663
AccBSI CCGCTC 1 cut(s) 822
AccI GTMKAC 2 cut(s) 456, 729
AccII CGCG 2 cut(s) 61, 737
AciI CCGC 5 cut(s) 18, 350, 735, 797, 822
AclWI GGATC 5 cut(s) 103, 382, 715, 957, 970
AcoI YGGCCR 2 cut(s) 351, 396
AcsI RAATTY 1 cut(s) 506
AcyI GRCGYC 2 cut(s) 660, 732
AfaI GTAC 5 cut(s) 269, 518, 833, 1059, 1119
AfeI AGCGCT 1 cut(s) 668
AfiI CCNNNNNNNGG 2 cut(s) 855, 1461
AgeI ACCGGT 2 cut(s) 451, 1493
AgsI TTSAA 7 cut(s) 91, 325, 412, 535, 673, 1093, 1373
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 4 cut(s) 177, 681, 696, 1296
AloI GAACNNNNNNTCC 4 cut(s) 64, 96, 471, 503
Alw21I GWGCWC 4 cut(s) 9, 288, 900, 1332
Alw26I GTCTC 3 cut(s) 40, 1105, 1427
AlwI GGATC 5 cut(s) 103, 382, 715, 957, 970
Ama87I CYCGRG 3 cut(s) 575, 776, 1073
Aor51HI AGCGCT 1 cut(s) 668
AoxI GGCC 3 cut(s) 351, 384, 396
ApeKI GCWGC 3 cut(s) 122, 620, 1249
ApoI RAATTY 1 cut(s) 506
AsiGI ACCGGT 2 cut(s) 451, 1493
AspLEI GCGC 2 cut(s) 669, 1296
AspS9I GGNCC 1 cut(s) 571
AsuHPI GGTGA 6 cut(s) 268, 466, 553, 814, 934, 1234
AsuII TTCGAA 2 cut(s) 70, 654
AvaI CYCGRG 3 cut(s) 575, 776, 1073
AvaII GGWCC 1 cut(s) 571
AxyI CCTNAGG 1 cut(s) 891
BaeGI GKGCMC 1 cut(s) 828
BamHI GGATCC 1 cut(s) 962
BanII GRGCYC 3 cut(s) 288, 900, 1332
BbsI GAAGAC 3 cut(s) 663, 1085, 1275
Bbv12I GWGCWC 4 cut(s) 9, 288, 900, 1332
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 3 cut(s) 134, 607, 1236
BccI CCATC 7 cut(s) 196, 245, 395, 586, 617, 702, 1351
BceAI ACGGC 2 cut(s) 185, 338
BciT130I CCWGG 4 cut(s) 179, 683, 698, 1298
BciVI GTATCC 2 cut(s) 706, 1010
BcoDI GTCTC 3 cut(s) 40, 1105, 1427
BfoI RGCGCY 2 cut(s) 670, 1297
BfuI GTATCC 2 cut(s) 706, 1010
BglI GCCNNNNNGGC 1 cut(s) 404
BisI GCNGC 6 cut(s) 123, 351, 621, 735, 797, 1250
BlpI GCTNAGC 3 cut(s) 1233, 1290, 1352
BlsI GCNGC 6 cut(s) 124, 352, 622, 736, 798, 1251
Bme1390I CCNGG 4 cut(s) 179, 683, 698, 1298
Bme18I GGWCC 1 cut(s) 571
BmeT110I CYCGRG 3 cut(s) 575, 776, 1073
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 1 cut(s) 571
BmiI GGNNCC 5 cut(s) 207, 481, 573, 634, 964
BmrFI CCNGG 4 cut(s) 179, 683, 698, 1298
BmsI GCATC 5 cut(s) 29, 141, 191, 819, 1219
BpiI GAAGAC 3 cut(s) 663, 1085, 1275
BplI GAGNNNNNCTC 2 cut(s) 1056, 1088
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 441
Bpu1102I GCTNAGC 3 cut(s) 1233, 1290, 1352
Bpu14I TTCGAA 2 cut(s) 70, 654
BsaAI YACGTR 1 cut(s) 565
BsaHI GRCGYC 2 cut(s) 660, 732
BsaJI CCNNGG 6 cut(s) 83, 167, 381, 628, 919, 1104
BsaWI WCCGGW 3 cut(s) 451, 476, 1493
BsaXI ACNNNNNCTCC 4 cut(s) 471, 501, 530, 560
Bsc4I CCNNNNNNNGG 2 cut(s) 855, 1461
Bse118I RCCGGY 3 cut(s) 451, 1222, 1493
Bse1I ACTGG 1 cut(s) 709
Bse21I CCTNAGG 1 cut(s) 891
Bse3DI GCAATG 1 cut(s) 750
BseBI CCWGG 4 cut(s) 179, 683, 698, 1298
BseDI CCNNGG 6 cut(s) 83, 167, 381, 628, 919, 1104
BseGI GGATG 5 cut(s) 207, 268, 559, 713, 1308
BseLI CCNNNNNNNGG 2 cut(s) 855, 1461
BseMI GCAATG 1 cut(s) 750
BseMII CTCAG 7 cut(s) 273, 432, 882, 995, 1247, 1281, 1366
BseNI ACTGG 1 cut(s) 709
BseRI GAGGAG 3 cut(s) 430, 448, 908
BseSI GKGCMC 1 cut(s) 828
BseX3I CGGCCG 1 cut(s) 351
BseXI GCAGC 3 cut(s) 134, 607, 1236
BseYI CCCAGC 1 cut(s) 498
Bsh1236I CGCG 2 cut(s) 61, 737
Bsh1285I CGRYCG 2 cut(s) 354, 456
BshFI GGCC 3 cut(s) 353, 386, 398
BshTI ACCGGT 2 cut(s) 451, 1493
BsiEI CGRYCG 2 cut(s) 354, 456
BsiHKAI GWGCWC 4 cut(s) 9, 288, 900, 1332
BsiHKCI CYCGRG 3 cut(s) 575, 776, 1073
BsiSI CCGG 7 cut(s) 209, 399, 452, 477, 849, 1223, 1494
BslI CCNNNNNNNGG 2 cut(s) 855, 1461
BsmAI GTCTC 3 cut(s) 40, 1105, 1427
BsmBI CGTCTC 1 cut(s) 1105
BsmI GAATGC 2 cut(s) 218, 407
BsnI GGCC 3 cut(s) 353, 386, 398
BsoBI CYCGRG 3 cut(s) 575, 776, 1073
Bsp119I TTCGAA 2 cut(s) 70, 654
Bsp1286I GDGCHC 5 cut(s) 9, 288, 828, 900, 1332
Bsp143I GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
Bsp1720I GCTNAGC 3 cut(s) 1233, 1290, 1352
Bsp68I TCGCGA 1 cut(s) 61
BspACI CCGC 5 cut(s) 18, 350, 735, 797, 822
BspANI GGCC 3 cut(s) 353, 386, 398
BspCNI CTCAG 7 cut(s) 274, 433, 883, 994, 1246, 1282, 1365
BspFNI CGCG 2 cut(s) 61, 737
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 5 cut(s) 207, 481, 573, 634, 964
BspPI GGATC 5 cut(s) 103, 382, 715, 957, 970
BspQI GCTCTTC 1 cut(s) 800
BspT104I TTCGAA 2 cut(s) 70, 654
BsrBI CCGCTC 1 cut(s) 822
BsrDI GCAATG 1 cut(s) 750
BsrFI RCCGGY 3 cut(s) 451, 1222, 1493
BsrI ACTGG 1 cut(s) 709
BssAI RCCGGY 3 cut(s) 451, 1222, 1493
BssECI CCNNGG 6 cut(s) 83, 167, 381, 628, 919, 1104
BssMI GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
BssNI GRCGYC 2 cut(s) 660, 732
BssT1I CCWWGG 3 cut(s) 83, 919, 1104
Bst2UI CCWGG 4 cut(s) 179, 683, 698, 1298
Bst4CI ACNGT 4 cut(s) 370, 1246, 1364, 1408
Bst6I CTCTTC 3 cut(s) 84, 800, 1415
BstACI GRCGYC 2 cut(s) 660, 732
BstBAI YACGTR 1 cut(s) 565
BstBI TTCGAA 2 cut(s) 70, 654
BstC8I GCNNGC 3 cut(s) 824, 1209, 1224
BstDEI CTNAG 8 cut(s) 282, 441, 891, 981, 1061, 1233, 1290, 1352
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 5 cut(s) 207, 268, 559, 713, 1308
BstFNI CGCG 2 cut(s) 61, 737
BstH2I RGCGCY 2 cut(s) 670, 1297
BstHHI GCGC 2 cut(s) 669, 1296
BstKTI GATC 9 cut(s) 111, 135, 377, 679, 723, 931, 965, 1098, 1173
BstMAI GTCTC 3 cut(s) 40, 1105, 1427
BstMBI GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
BstMCI CGRYCG 2 cut(s) 354, 456
BstMWI GCNNNNNNNGC 2 cut(s) 404, 895
BstNI CCWGG 4 cut(s) 179, 683, 698, 1298
BstNSI RCATGY 1 cut(s) 1241
BstSCI CCNGG 4 cut(s) 177, 681, 696, 1296
BstSLI GKGCMC 1 cut(s) 828
BstSNI TACGTA 1 cut(s) 565
BstUI CGCG 2 cut(s) 61, 737
BstV1I GCAGC 3 cut(s) 134, 607, 1236
BstV2I GAAGAC 3 cut(s) 663, 1085, 1275
BstX2I RGATCY 2 cut(s) 374, 962
BstXI CCANNNNNNTGG 2 cut(s) 394, 704
BstYI RGATCY 2 cut(s) 374, 962
BstZI CGGCCG 1 cut(s) 351
Bsu36I CCTNAGG 1 cut(s) 891
BsuI GTATCC 2 cut(s) 706, 1010
BsuRI GGCC 3 cut(s) 353, 386, 398
BtgI CCRYGG 1 cut(s) 167
BtgZI GCGATG 1 cut(s) 6
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 5 cut(s) 207, 268, 559, 713, 1308
BtsIMutI CAGTG 1 cut(s) 279
BtuMI TCGCGA 1 cut(s) 61
Cac8I GCNNGC 3 cut(s) 824, 1209, 1224
CciI TCATGA 1 cut(s) 1042
CfoI GCGC 2 cut(s) 669, 1296
Cfr10I RCCGGY 3 cut(s) 451, 1222, 1493
Cfr13I GGNCC 1 cut(s) 571
CseI GACGC 3 cut(s) 128, 740, 1175
Csp6I GTAC 5 cut(s) 268, 517, 832, 1058, 1118
CspAI ACCGGT 2 cut(s) 451, 1493
CviAII CATG 8 cut(s) 307, 391, 725, 1030, 1043, 1238, 1325, 1414
CviQI GTAC 5 cut(s) 268, 517, 832, 1058, 1118
DdeI CTNAG 8 cut(s) 282, 441, 891, 981, 1061, 1233, 1290, 1352
DpnI GATC 9 cut(s) 110, 134, 376, 678, 722, 930, 964, 1097, 1172
DpnII GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
EaeI YGGCCR 2 cut(s) 351, 396
EagI CGGCCG 1 cut(s) 351
Eam1104I CTCTTC 3 cut(s) 84, 800, 1415
EarI CTCTTC 3 cut(s) 84, 800, 1415
Ecl136II GAGCTC 3 cut(s) 286, 898, 1330
EclXI CGGCCG 1 cut(s) 351
Eco105I TACGTA 1 cut(s) 565
Eco130I CCWWGG 3 cut(s) 83, 919, 1104
Eco24I GRGCYC 3 cut(s) 288, 900, 1332
Eco47I GGWCC 1 cut(s) 571
Eco47III AGCGCT 1 cut(s) 668
Eco52I CGGCCG 1 cut(s) 351
Eco53kI GAGCTC 3 cut(s) 286, 898, 1330
Eco81I CCTNAGG 1 cut(s) 891
Eco88I CYCGRG 3 cut(s) 575, 776, 1073
EcoICRI GAGCTC 3 cut(s) 286, 898, 1330
EcoRII CCWGG 4 cut(s) 177, 681, 696, 1296
EcoT14I CCWWGG 3 cut(s) 83, 919, 1104
EcoT38I GRGCYC 3 cut(s) 288, 900, 1332
ErhI CCWWGG 3 cut(s) 83, 919, 1104
Esp3I CGTCTC 1 cut(s) 1105
FaeI CATG 8 cut(s) 310, 394, 728, 1033, 1046, 1241, 1328, 1417
FatI CATG 8 cut(s) 306, 390, 724, 1029, 1042, 1237, 1324, 1413
FauI CCCGC 1 cut(s) 815
FblI GTMKAC 2 cut(s) 456, 729
Fnu4HI GCNGC 6 cut(s) 123, 351, 621, 735, 797, 1250
FokI GGATG 5 cut(s) 214, 275, 566, 720, 1295
FriOI GRGCYC 3 cut(s) 288, 900, 1332
Fsp4HI GCNGC 6 cut(s) 123, 351, 621, 735, 797, 1250
GlaI GCGC 2 cut(s) 668, 1295
GluI GCNGC 6 cut(s) 123, 351, 621, 735, 797, 1250
GsaI CCCAGC 1 cut(s) 502
GsuI CTGGAG 1 cut(s) 272
HaeII RGCGCY 2 cut(s) 670, 1297
HaeIII GGCC 3 cut(s) 353, 386, 398
HapII CCGG 7 cut(s) 209, 399, 452, 477, 849, 1223, 1494
HgaI GACGC 3 cut(s) 128, 740, 1175
HhaI GCGC 2 cut(s) 669, 1296
Hin1I GRCGYC 2 cut(s) 660, 732
Hin1II CATG 8 cut(s) 310, 394, 728, 1033, 1046, 1241, 1328, 1417
Hin6I GCGC 2 cut(s) 667, 1294
HinP1I GCGC 2 cut(s) 667, 1294
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HinfI GANTC 4 cut(s) 292, 341, 360, 1071
HpaII CCGG 7 cut(s) 209, 399, 452, 477, 849, 1223, 1494
HphI GGTGA 6 cut(s) 268, 466, 553, 814, 934, 1234
Hpy166II GTNNAC 5 cut(s) 43, 304, 457, 730, 1404
Hpy188I TCNGA 7 cut(s) 31, 132, 338, 346, 382, 720, 1265
Hpy188III TCNNGA 9 cut(s) 60, 112, 190, 289, 412, 1043, 1075, 1093, 1312
Hpy8I GTNNAC 5 cut(s) 43, 304, 457, 730, 1404
Hpy99I CGWCG 4 cut(s) 146, 199, 257, 1191
HpyAV CCTTC 6 cut(s) 61, 109, 529, 949, 1061, 1349
HpyCH4III ACNGT 4 cut(s) 370, 1246, 1364, 1408
HpyCH4IV ACGT 6 cut(s) 66, 197, 252, 564, 660, 816
HpyCH4V TGCA 3 cut(s) 329, 512, 1324
HpyF10VI GCNNNNNNNGC 2 cut(s) 404, 895
HpyF3I CTNAG 8 cut(s) 282, 441, 891, 981, 1061, 1233, 1290, 1352
HpySE526I ACGT 6 cut(s) 66, 197, 252, 564, 660, 816
Hsp92I GRCGYC 2 cut(s) 660, 732
Hsp92II CATG 8 cut(s) 310, 394, 728, 1033, 1046, 1241, 1328, 1417
HspAI GCGC 2 cut(s) 667, 1294
KroI GCCGGC 1 cut(s) 1222
KroNI GCCGGC 1 cut(s) 1224
Kzo9I GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
LguI GCTCTTC 1 cut(s) 800
LmnI GCTCC 7 cut(s) 205, 291, 479, 760, 895, 923, 1361
Lsp1109I GCAGC 3 cut(s) 134, 607, 1236
LweI GCATC 5 cut(s) 29, 141, 191, 819, 1219
MaeII ACGT 6 cut(s) 66, 197, 252, 564, 660, 816
MaeIII GTNAC 5 cut(s) 190, 274, 472, 1240, 1408
MalI GATC 9 cut(s) 110, 134, 376, 678, 722, 930, 964, 1097, 1172
MbiI CCGCTC 1 cut(s) 822
MboI GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
MflI RGATCY 2 cut(s) 374, 962
MhlI GDGCHC 5 cut(s) 9, 288, 828, 900, 1332
MluCI AATT 6 cut(s) 506, 852, 949, 972, 996, 1036
MlyI GAGTC 2 cut(s) 369, 1065
MmeI TCCRAC 2 cut(s) 337, 1383
MroNI GCCGGC 1 cut(s) 1222
MslI CAYNNNNRTG 1 cut(s) 815
MspA1I CMGCKG 1 cut(s) 799
MspI CCGG 7 cut(s) 209, 399, 452, 477, 849, 1223, 1494
MspR9I CCNGG 4 cut(s) 179, 683, 698, 1298
Mva1269I GAATGC 2 cut(s) 218, 407
MvaI CCWGG 4 cut(s) 179, 683, 698, 1298
MvnI CGCG 2 cut(s) 61, 737
MwoI GCNNNNNNNGC 2 cut(s) 404, 895
NaeI GCCGGC 1 cut(s) 1224
NdeII GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
NgoMIV GCCGGC 1 cut(s) 1222
NlaIII CATG 8 cut(s) 310, 394, 728, 1033, 1046, 1241, 1328, 1417
NlaIV GGNNCC 5 cut(s) 207, 481, 573, 634, 964
NmuCI GTSAC 4 cut(s) 190, 274, 472, 1240
NruI TCGCGA 1 cut(s) 61
NspI RCATGY 1 cut(s) 1241
NspV TTCGAA 2 cut(s) 70, 654
PaeR7I CTCGAG 2 cut(s) 776, 1073
PagI TCATGA 1 cut(s) 1042
PciSI GCTCTTC 1 cut(s) 800
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 2 cut(s) 218, 407
PdiI GCCGGC 1 cut(s) 1224
PfeI GAWTC 2 cut(s) 292, 341
PinAI ACCGGT 2 cut(s) 451, 1493
PkrI GCNGC 6 cut(s) 124, 352, 622, 736, 798, 1251
PleI GAGTC 2 cut(s) 368, 1065
PpsI GAGTC 2 cut(s) 368, 1065
Ppu21I YACGTR 1 cut(s) 565
Psp124BI GAGCTC 3 cut(s) 288, 900, 1332
Psp6I CCWGG 4 cut(s) 177, 681, 696, 1296
PspFI CCCAGC 1 cut(s) 498
PspGI CCWGG 4 cut(s) 177, 681, 696, 1296
PspN4I GGNNCC 5 cut(s) 207, 481, 573, 634, 964
PspPI GGNCC 1 cut(s) 571
PspXI VCTCGAGB 1 cut(s) 776
PsuI RGATCY 2 cut(s) 374, 962
RruI TCGCGA 1 cut(s) 61
RsaI GTAC 5 cut(s) 269, 518, 833, 1059, 1119
RsaNI GTAC 5 cut(s) 268, 517, 832, 1058, 1118
RseI CAYNNNNRTG 1 cut(s) 815
SacI GAGCTC 3 cut(s) 288, 900, 1332
SalI GTCGAC 1 cut(s) 455
SapI GCTCTTC 1 cut(s) 800
SatI GCNGC 6 cut(s) 123, 351, 621, 735, 797, 1250
Sau3AI GATC 9 cut(s) 108, 132, 374, 676, 720, 928, 962, 1095, 1170
Sau96I GGNCC 1 cut(s) 571
SchI GAGTC 2 cut(s) 369, 1065
ScrFI CCNGG 4 cut(s) 179, 683, 698, 1298
SduI GDGCHC 5 cut(s) 9, 288, 828, 900, 1332
SfaNI GCATC 5 cut(s) 29, 141, 191, 819, 1219
Sfr274I CTCGAG 2 cut(s) 776, 1073
SfuI TTCGAA 2 cut(s) 70, 654
SinI GGWCC 1 cut(s) 571
SlaI CTCGAG 2 cut(s) 776, 1073
SmiMI CAYNNNNRTG 1 cut(s) 815
SmlI CTYRAG 2 cut(s) 776, 1073
SmoI CTYRAG 2 cut(s) 776, 1073
SnaBI TACGTA 1 cut(s) 565
Sse9I AATT 6 cut(s) 506, 852, 949, 972, 996, 1036
SsiI CCGC 5 cut(s) 18, 350, 735, 797, 822
SstI GAGCTC 3 cut(s) 288, 900, 1332
StyD4I CCNGG 4 cut(s) 177, 681, 696, 1296
StyI CCWWGG 3 cut(s) 83, 919, 1104
TaaI ACNGT 4 cut(s) 370, 1246, 1364, 1408
TaiI ACGT 6 cut(s) 69, 200, 255, 567, 663, 819
TaqI TCGA 8 cut(s) 70, 107, 255, 456, 654, 777, 1074, 1332
TasI AATT 6 cut(s) 506, 852, 949, 972, 996, 1036
TatI WGTACW 1 cut(s) 1057
TauI GCSGC 3 cut(s) 353, 737, 799
TfiI GAWTC 2 cut(s) 292, 341
TscAI CASTG 1 cut(s) 286
TseFI GTSAC 4 cut(s) 190, 274, 472, 1240
TseI GCWGC 3 cut(s) 122, 620, 1249
Tsp45I GTSAC 4 cut(s) 190, 274, 472, 1240
TspDTI ATGAA 2 cut(s) 739, 1430
TspGWI ACGGA 4 cut(s) 174, 747, 779, 849
TspRI CASTG 1 cut(s) 286
VpaK11BI GGWCC 1 cut(s) 571
XapI RAATTY 1 cut(s) 506
XceI RCATGY 1 cut(s) 1241
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XhoI CTCGAG 2 cut(s) 776, 1073
XmiI GTMKAC 2 cut(s) 456, 729
ZraI GACGTC 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.