Wall-associated receptor kinase C-terminal
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 37 - 104 | 4e-16 | Wall-associated receptor kinase galacturonan-binding |
| WAK_assoc | PF14380 | 184 - 252 | 6.9e-15 | Wall-associated receptor kinase C-terminal |
| PK_Tyr_Ser-Thr | PF07714 | 332 - 603 | 4.5e-41 | Protein tyrosine and serine/threonine kinase |
| Pkinase | PF00069 | 333 - 602 | 5.8e-44 | Protein kinase domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1480 |
| Acc36I | ACCTGC | 1 cut(s) | 1792 |
| AccI | GTMKAC | 1 cut(s) | 778 |
| AciI | CCGC | 7 cut(s) | 132, 186, 274, 685, 836, 1646, 1663 |
| AclWI | GGATC | 2 cut(s) | 482, 1231 |
| AcoI | YGGCCR | 2 cut(s) | 133, 1054 |
| AcsI | RAATTY | 3 cut(s) | 1208, 1356, 1525 |
| AcuI | CTGAAG | 4 cut(s) | 495, 839, 1530, 1635 |
| AfaI | GTAC | 4 cut(s) | 266, 470, 816, 1489 |
| AfeI | AGCGCT | 1 cut(s) | 495 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 691, 882, 927, 1672 |
| AflIII | ACRYGT | 1 cut(s) | 1144 |
| AgsI | TTSAA | 9 cut(s) | 203, 327, 599, 947, 997, 1081, 1188, 1470, 1622 |
| AhlI | ACTAGT | 1 cut(s) | 1628 |
| AjnI | CCWGG | 1 cut(s) | 526 |
| AleI | CACNNNNGTG | 1 cut(s) | 111 |
| Alw21I | GWGCWC | 1 cut(s) | 1198 |
| Alw26I | GTCTC | 3 cut(s) | 313, 719, 1543 |
| AlwI | GGATC | 2 cut(s) | 482, 1231 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 687 |
| Ama87I | CYCGRG | 2 cut(s) | 194, 1317 |
| Aor51HI | AGCGCT | 1 cut(s) | 495 |
| AoxI | GGCC | 6 cut(s) | 133, 758, 918, 938, 1054, 1429 |
| ApeKI | GCWGC | 7 cut(s) | 317, 435, 523, 681, 687, 854, 1124 |
| ApoI | RAATTY | 3 cut(s) | 1208, 1356, 1525 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 734 |
| AspA2I | CCTAGG | 1 cut(s) | 163 |
| AspLEI | GCGC | 3 cut(s) | 496, 523, 1481 |
| AspS9I | GGNCC | 1 cut(s) | 938 |
| AsuC2I | CCSGG | 2 cut(s) | 195, 196 |
| AsuHPI | GGTGA | 1 cut(s) | 1106 |
| AvaI | CYCGRG | 2 cut(s) | 194, 1317 |
| AvrII | CCTAGG | 1 cut(s) | 163 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BanII | GRGCYC | 1 cut(s) | 1198 |
| BbsI | GAAGAC | 2 cut(s) | 1110, 1851 |
| Bbv12I | GWGCWC | 1 cut(s) | 1198 |
| BbvI | GCAGC | 7 cut(s) | 304, 447, 510, 674, 693, 841, 1136 |
| BccI | CCATC | 5 cut(s) | 224, 1046, 1091, 1275, 1579 |
| BceAI | ACGGC | 1 cut(s) | 1041 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1747, 1781 |
| BciT130I | CCWGG | 1 cut(s) | 528 |
| BciVI | GTATCC | 1 cut(s) | 227 |
| BclI | TGATCA | 2 cut(s) | 382, 498 |
| BcnI | CCSGG | 2 cut(s) | 195, 196 |
| BcoDI | GTCTC | 3 cut(s) | 313, 719, 1543 |
| BcuI | ACTAGT | 1 cut(s) | 1628 |
| BfaI | CTAG | 5 cut(s) | 164, 752, 1629, 1667, 1876 |
| BfmI | CTRYAG | 7 cut(s) | 109, 211, 433, 679, 775, 855, 1519 |
| BfoI | RGCGCY | 2 cut(s) | 497, 524 |
| BfuAI | ACCTGC | 1 cut(s) | 1792 |
| BfuI | GTATCC | 1 cut(s) | 227 |
| BglII | AGATCT | 1 cut(s) | 1074 |
| BlnI | CCTAGG | 1 cut(s) | 163 |
| BmcAI | AGTACT | 1 cut(s) | 266 |
| Bme1390I | CCNGG | 3 cut(s) | 195, 196, 528 |
| BmeT110I | CYCGRG | 2 cut(s) | 194, 1317 |
| BmgT120I | GGNCC | 1 cut(s) | 938 |
| BmrFI | CCNGG | 3 cut(s) | 195, 196, 528 |
| BmsI | GCATC | 4 cut(s) | 1237, 1334, 1563, 1707 |
| BpiI | GAAGAC | 2 cut(s) | 1110, 1851 |
| BpmI | CTGGAG | 2 cut(s) | 935, 1346 |
| BpuEI | CTTGAG | 1 cut(s) | 1250 |
| BpuMI | CCSGG | 2 cut(s) | 195, 196 |
| BsaI | GGTCTC | 1 cut(s) | 1543 |
| BsaJI | CCNNGG | 3 cut(s) | 163, 194, 527 |
| BsaWI | WCCGGW | 1 cut(s) | 592 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 691, 882, 927, 1672 |
| Bse1I | ACTGG | 1 cut(s) | 1329 |
| Bse3DI | GCAATG | 1 cut(s) | 1311 |
| BseBI | CCWGG | 1 cut(s) | 528 |
| BseDI | CCNNGG | 3 cut(s) | 163, 194, 527 |
| BseGI | GGATG | 6 cut(s) | 159, 976, 1286, 1349, 1681, 1717 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 691, 882, 927, 1672 |
| BseMI | GCAATG | 1 cut(s) | 1311 |
| BseMII | CTCAG | 1 cut(s) | 282 |
| BseNI | ACTGG | 1 cut(s) | 1329 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| BseXI | GCAGC | 7 cut(s) | 304, 447, 510, 674, 693, 841, 1136 |
| BshFI | GGCC | 6 cut(s) | 135, 760, 920, 940, 1056, 1431 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1198 |
| BsiHKCI | CYCGRG | 2 cut(s) | 194, 1317 |
| BsiSI | CCGG | 2 cut(s) | 195, 593 |
| BslFI | GGGAC | 1 cut(s) | 1393 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 691, 882, 927, 1672 |
| BsmAI | GTCTC | 3 cut(s) | 313, 719, 1543 |
| BsmBI | CGTCTC | 2 cut(s) | 313, 719 |
| BsmFI | GGGAC | 1 cut(s) | 1393 |
| BsnI | GGCC | 6 cut(s) | 135, 760, 920, 940, 1056, 1431 |
| Bso31I | GGTCTC | 1 cut(s) | 1543 |
| BsoBI | CYCGRG | 2 cut(s) | 194, 1317 |
| Bsp1286I | GDGCHC | 2 cut(s) | 120, 1198 |
| Bsp143I | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| BspACI | CCGC | 7 cut(s) | 132, 186, 274, 685, 836, 1646, 1663 |
| BspANI | GGCC | 6 cut(s) | 135, 760, 920, 940, 1056, 1431 |
| BspCNI | CTCAG | 1 cut(s) | 281 |
| BspHI | TCATGA | 2 cut(s) | 1110, 1701 |
| BspMAI | CTGCAG | 5 cut(s) | 113, 215, 437, 683, 859 |
| BspMI | ACCTGC | 1 cut(s) | 1792 |
| BspPI | GGATC | 2 cut(s) | 482, 1231 |
| BspQI | GCTCTTC | 1 cut(s) | 26 |
| BspTNI | GGTCTC | 1 cut(s) | 1543 |
| BsrDI | GCAATG | 1 cut(s) | 1311 |
| BsrI | ACTGG | 1 cut(s) | 1329 |
| BssECI | CCNNGG | 3 cut(s) | 163, 194, 527 |
| BssMI | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| BssT1I | CCWWGG | 1 cut(s) | 163 |
| Bst2UI | CCWGG | 1 cut(s) | 528 |
| Bst4CI | ACNGT | 2 cut(s) | 546, 698 |
| Bst6I | CTCTTC | 4 cut(s) | 26, 306, 568, 627 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 687 |
| BstC8I | GCNNGC | 1 cut(s) | 673 |
| BstDEI | CTNAG | 3 cut(s) | 268, 355, 926 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 925 |
| BstF5I | GGATG | 6 cut(s) | 159, 976, 1286, 1349, 1681, 1717 |
| BstH2I | RGCGCY | 2 cut(s) | 497, 524 |
| BstHHI | GCGC | 3 cut(s) | 496, 523, 1481 |
| BstKTI | GATC | 8 cut(s) | 385, 490, 501, 825, 1077, 1088, 1226, 1270 |
| BstMAI | GTCTC | 3 cut(s) | 313, 719, 1543 |
| BstMBI | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 681, 687, 747, 1755 |
| BstNI | CCWGG | 1 cut(s) | 528 |
| BstNSI | RCATGY | 1 cut(s) | 1148 |
| BstSCI | CCNGG | 3 cut(s) | 193, 194, 526 |
| BstSFI | CTRYAG | 7 cut(s) | 109, 211, 433, 679, 775, 855, 1519 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstV1I | GCAGC | 7 cut(s) | 304, 447, 510, 674, 693, 841, 1136 |
| BstV2I | GAAGAC | 2 cut(s) | 1110, 1851 |
| BstX2I | RGATCY | 2 cut(s) | 1074, 1223 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 254 |
| BstYI | RGATCY | 2 cut(s) | 1074, 1223 |
| BsuI | GTATCC | 1 cut(s) | 227 |
| BsuRI | GGCC | 6 cut(s) | 135, 760, 920, 940, 1056, 1431 |
| BtgZI | GCGATG | 1 cut(s) | 1802 |
| BtsCI | GGATG | 6 cut(s) | 159, 976, 1286, 1349, 1681, 1717 |
| BtsI | GCAGTG | 4 cut(s) | 106, 118, 864, 1074 |
| BtsIMutI | CAGTG | 5 cut(s) | 106, 118, 703, 864, 1074 |
| BveI | ACCTGC | 1 cut(s) | 1792 |
| Cac8I | GCNNGC | 1 cut(s) | 673 |
| CaiI | CAGNNNCTG | 1 cut(s) | 687 |
| CciI | TCATGA | 2 cut(s) | 1110, 1701 |
| CfoI | GCGC | 3 cut(s) | 496, 523, 1481 |
| Cfr13I | GGNCC | 1 cut(s) | 938 |
| Cfr9I | CCCGGG | 1 cut(s) | 194 |
| Csp6I | GTAC | 4 cut(s) | 265, 469, 815, 1488 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 109, 144 |
| CviAII | CATG | 6 cut(s) | 260, 764, 1111, 1145, 1213, 1702 |
| CviQI | GTAC | 4 cut(s) | 265, 469, 815, 1488 |
| DdeI | CTNAG | 3 cut(s) | 268, 355, 926 |
| DpnI | GATC | 8 cut(s) | 384, 489, 500, 824, 1076, 1087, 1225, 1269 |
| DpnII | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| EaeI | YGGCCR | 2 cut(s) | 133, 1054 |
| Eam1104I | CTCTTC | 4 cut(s) | 26, 306, 568, 627 |
| EarI | CTCTTC | 4 cut(s) | 26, 306, 568, 627 |
| Ecl136II | GAGCTC | 1 cut(s) | 1196 |
| Eco130I | CCWWGG | 1 cut(s) | 163 |
| Eco147I | AGGCCT | 2 cut(s) | 760, 920 |
| Eco24I | GRGCYC | 1 cut(s) | 1198 |
| Eco31I | GGTCTC | 1 cut(s) | 1543 |
| Eco47III | AGCGCT | 1 cut(s) | 495 |
| Eco53kI | GAGCTC | 1 cut(s) | 1196 |
| Eco57I | CTGAAG | 4 cut(s) | 495, 839, 1530, 1635 |
| Eco88I | CYCGRG | 2 cut(s) | 194, 1317 |
| EcoICRI | GAGCTC | 1 cut(s) | 1196 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 925 |
| EcoRI | GAATTC | 1 cut(s) | 1208 |
| EcoRII | CCWGG | 1 cut(s) | 526 |
| EcoT14I | CCWWGG | 1 cut(s) | 163 |
| EcoT38I | GRGCYC | 1 cut(s) | 1198 |
| ErhI | CCWWGG | 1 cut(s) | 163 |
| Esp3I | CGTCTC | 2 cut(s) | 313, 719 |
| FaeI | CATG | 6 cut(s) | 263, 767, 1114, 1148, 1216, 1705 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 131, 163, 1838, 1870 |
| FaqI | GGGAC | 1 cut(s) | 1393 |
| FatI | CATG | 6 cut(s) | 259, 763, 1110, 1144, 1212, 1701 |
| FbaI | TGATCA | 2 cut(s) | 382, 498 |
| FblI | GTMKAC | 1 cut(s) | 778 |
| FokI | GGATG | 6 cut(s) | 146, 983, 1293, 1356, 1688, 1724 |
| FriOI | GRGCYC | 1 cut(s) | 1198 |
| FspBI | CTAG | 5 cut(s) | 164, 752, 1629, 1667, 1876 |
| FspI | TGCGCA | 1 cut(s) | 1480 |
| GlaI | GCGC | 3 cut(s) | 495, 522, 1480 |
| GsuI | CTGGAG | 2 cut(s) | 935, 1346 |
| HaeII | RGCGCY | 2 cut(s) | 497, 524 |
| HaeIII | GGCC | 6 cut(s) | 135, 760, 920, 940, 1056, 1431 |
| HapII | CCGG | 2 cut(s) | 195, 593 |
| HhaI | GCGC | 3 cut(s) | 496, 523, 1481 |
| Hin1II | CATG | 6 cut(s) | 263, 767, 1114, 1148, 1216, 1705 |
| Hin6I | GCGC | 3 cut(s) | 494, 521, 1479 |
| HinP1I | GCGC | 3 cut(s) | 494, 521, 1479 |
| HincII | GTYRAC | 1 cut(s) | 1150 |
| HindII | GTYRAC | 1 cut(s) | 1150 |
| HindIII | AAGCTT | 1 cut(s) | 145 |
| HinfI | GANTC | 7 cut(s) | 4, 92, 455, 714, 730, 901, 957 |
| HpaII | CCGG | 2 cut(s) | 195, 593 |
| HphI | GGTGA | 1 cut(s) | 1106 |
| Hpy166II | GTNNAC | 4 cut(s) | 91, 779, 1033, 1150 |
| Hpy188I | TCNGA | 9 cut(s) | 73, 402, 466, 562, 724, 970, 1423, 1552, 1582 |
| Hpy188III | TCNNGA | 6 cut(s) | 1078, 1111, 1229, 1394, 1508, 1702 |
| Hpy8I | GTNNAC | 4 cut(s) | 91, 779, 1033, 1150 |
| HpyAV | CCTTC | 3 cut(s) | 886, 1593, 1808 |
| HpyCH4III | ACNGT | 2 cut(s) | 546, 698 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 681, 687, 747, 1755 |
| HpyF3I | CTNAG | 3 cut(s) | 268, 355, 926 |
| Hsp92II | CATG | 6 cut(s) | 263, 767, 1114, 1148, 1216, 1705 |
| HspAI | GCGC | 3 cut(s) | 494, 521, 1479 |
| Ksp22I | TGATCA | 2 cut(s) | 382, 498 |
| Kzo9I | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| LguI | GCTCTTC | 1 cut(s) | 26 |
| LmnI | GCTCC | 1 cut(s) | 1510 |
| Lsp1109I | GCAGC | 7 cut(s) | 304, 447, 510, 674, 693, 841, 1136 |
| LweI | GCATC | 4 cut(s) | 1237, 1334, 1563, 1707 |
| MaeI | CTAG | 5 cut(s) | 164, 752, 1629, 1667, 1876 |
| MaeIII | GTNAC | 2 cut(s) | 284, 586 |
| MalI | GATC | 8 cut(s) | 384, 489, 500, 824, 1076, 1087, 1225, 1269 |
| MboI | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| MfeI | CAATTG | 2 cut(s) | 32, 248 |
| MflI | RGATCY | 2 cut(s) | 1074, 1223 |
| MhlI | GDGCHC | 2 cut(s) | 120, 1198 |
| MluCI | AATT | 8 cut(s) | 32, 248, 809, 1208, 1299, 1356, 1525, 1670 |
| MlyI | GAGTC | 3 cut(s) | 86, 464, 910 |
| MroXI | GAANNNNTTC | 1 cut(s) | 734 |
| MseI | TTAA | 5 cut(s) | 368, 951, 1046, 1374, 1775 |
| MslI | CAYNNNNRTG | 2 cut(s) | 111, 1805 |
| MspA1I | CMGCKG | 3 cut(s) | 687, 741, 774 |
| MspI | CCGG | 2 cut(s) | 195, 593 |
| MspR9I | CCNGG | 3 cut(s) | 195, 196, 528 |
| MunI | CAATTG | 2 cut(s) | 32, 248 |
| MvaI | CCWGG | 1 cut(s) | 528 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 681, 687, 747, 1755 |
| NciI | CCSGG | 2 cut(s) | 195, 196 |
| NdeII | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| NlaIII | CATG | 6 cut(s) | 263, 767, 1114, 1148, 1216, 1705 |
| NsbI | TGCGCA | 1 cut(s) | 1480 |
| NspI | RCATGY | 1 cut(s) | 1148 |
| OliI | CACNNNNGTG | 1 cut(s) | 111 |
| PaeR7I | CTCGAG | 1 cut(s) | 1317 |
| PagI | TCATGA | 2 cut(s) | 1110, 1701 |
| PceI | AGGCCT | 2 cut(s) | 760, 920 |
| PciI | ACATGT | 1 cut(s) | 1144 |
| PciSI | GCTCTTC | 1 cut(s) | 26 |
| PdmI | GAANNNNTTC | 1 cut(s) | 734 |
| PfeI | GAWTC | 4 cut(s) | 4, 714, 730, 957 |
| PleI | GAGTC | 3 cut(s) | 86, 463, 909 |
| PpsI | GAGTC | 3 cut(s) | 86, 463, 909 |
| PscI | ACATGT | 1 cut(s) | 1144 |
| Psp124BI | GAGCTC | 1 cut(s) | 1198 |
| Psp6I | CCWGG | 1 cut(s) | 526 |
| PspGI | CCWGG | 1 cut(s) | 526 |
| PspPI | GGNCC | 1 cut(s) | 938 |
| PspXI | VCTCGAGB | 1 cut(s) | 1317 |
| PstI | CTGCAG | 5 cut(s) | 113, 215, 437, 683, 859 |
| PstNI | CAGNNNCTG | 1 cut(s) | 687 |
| PsuI | RGATCY | 2 cut(s) | 1074, 1223 |
| PvuII | CAGCTG | 2 cut(s) | 741, 774 |
| RsaI | GTAC | 4 cut(s) | 266, 470, 816, 1489 |
| RsaNI | GTAC | 4 cut(s) | 265, 469, 815, 1488 |
| RseI | CAYNNNNRTG | 2 cut(s) | 111, 1805 |
| SacI | GAGCTC | 1 cut(s) | 1198 |
| SapI | GCTCTTC | 1 cut(s) | 26 |
| SaqAI | TTAA | 5 cut(s) | 368, 951, 1046, 1374, 1775 |
| Sau3AI | GATC | 8 cut(s) | 382, 487, 498, 822, 1074, 1085, 1223, 1267 |
| Sau96I | GGNCC | 1 cut(s) | 938 |
| ScaI | AGTACT | 1 cut(s) | 266 |
| SchI | GAGTC | 3 cut(s) | 86, 464, 910 |
| ScrFI | CCNGG | 3 cut(s) | 195, 196, 528 |
| SduI | GDGCHC | 2 cut(s) | 120, 1198 |
| SfaNI | GCATC | 4 cut(s) | 1237, 1334, 1563, 1707 |
| SfcI | CTRYAG | 7 cut(s) | 109, 211, 433, 679, 775, 855, 1519 |
| Sfr274I | CTCGAG | 1 cut(s) | 1317 |
| SlaI | CTCGAG | 1 cut(s) | 1317 |
| SmaI | CCCGGG | 1 cut(s) | 196 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 111, 1805 |
| SmlI | CTYRAG | 2 cut(s) | 1229, 1317 |
| SmoI | CTYRAG | 2 cut(s) | 1229, 1317 |
| SpeI | ACTAGT | 1 cut(s) | 1628 |
| Sse9I | AATT | 8 cut(s) | 32, 248, 809, 1208, 1299, 1356, 1525, 1670 |
| SseBI | AGGCCT | 2 cut(s) | 760, 920 |
| SsiI | CCGC | 7 cut(s) | 132, 186, 274, 685, 836, 1646, 1663 |
| SspI | AATATT | 3 cut(s) | 280, 616, 1387 |
| SspMI | CTAG | 5 cut(s) | 164, 752, 1629, 1667, 1876 |
| SstI | GAGCTC | 1 cut(s) | 1198 |
| StuI | AGGCCT | 2 cut(s) | 760, 920 |
| StyD4I | CCNGG | 3 cut(s) | 193, 194, 526 |
| StyI | CCWWGG | 1 cut(s) | 163 |
| TaaI | ACNGT | 2 cut(s) | 546, 698 |
| TaqI | TCGA | 3 cut(s) | 1179, 1318, 1767 |
| TasI | AATT | 8 cut(s) | 32, 248, 809, 1208, 1299, 1356, 1525, 1670 |
| TatI | WGTACW | 2 cut(s) | 264, 468 |
| TauI | GCSGC | 3 cut(s) | 135, 189, 687 |
| TfiI | GAWTC | 4 cut(s) | 4, 714, 730, 957 |
| Tru1I | TTAA | 5 cut(s) | 368, 951, 1046, 1374, 1775 |
| Tru9I | TTAA | 5 cut(s) | 368, 951, 1046, 1374, 1775 |
| TscAI | CASTG | 5 cut(s) | 113, 118, 703, 864, 1074 |
| TseI | GCWGC | 7 cut(s) | 317, 435, 523, 681, 687, 854, 1124 |
| TspGWI | ACGGA | 1 cut(s) | 141 |
| TspMI | CCCGGG | 1 cut(s) | 194 |
| TspRI | CASTG | 5 cut(s) | 113, 118, 703, 864, 1074 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 925 |
| XapI | RAATTY | 3 cut(s) | 1208, 1356, 1525 |
| XceI | RCATGY | 1 cut(s) | 1148 |
| XhoI | CTCGAG | 1 cut(s) | 1317 |
| XmaI | CCCGGG | 1 cut(s) | 194 |
| XmaJI | CCTAGG | 1 cut(s) | 163 |
| XmiI | GTMKAC | 1 cut(s) | 778 |
| XmnI | GAANNNNTTC | 1 cut(s) | 734 |
| XspI | CTAG | 5 cut(s) | 164, 752, 1629, 1667, 1876 |
| ZrmI | AGTACT | 1 cut(s) | 266 |