Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003452

Physical Location & Seq

Genomic Coordinates Reverse (-)

27205174 .. 27211337

Gene Structure 6164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00404710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGCACTTTCCCCACTTACTAGGCTTCACTTCCACACCTGCCATGCACCTTTCTCAGTTTCCCAGTCACCACAGCCAGTTATCTGGCCATGTTCAGAGTCCCCACTTGGGTAAAACCAGACCCAGAAGTCAACAACCACCGATTTCCATTTTAGGATGTTACAATGTTAAAGACTACTTGCAGACTCAAACACCCAGAAGGGAATTGAATCAAGGGAGTGGATTGAGATATTGGAATTCGAAAAATTGGAGCTTTGCAGTGAGGTCCAGTTCAACATTGAGCGTAGATAAAGTGTTGGAGAGTGATGGAAAGGCAGGTGGGAAGAGTAAATATGATGCTATTGTTATAGGGTCAGGGATTGGAGGGTTGGTTGCAGCTACACAGTTGGCTGTGAAGGGTGCCAAGGTTTTGGTTTTGGAGAAGTATGTGATTCCTGGTGGGAGTTCTGGGTACTATGAGAGGGATGGTTATACTTTCGATGTTGGGTCTTCTGTCATGTTCGGTTTCAGCGATAAGGGCAATCTAAACTTGATAACACAAGCATTGGCAGCAGTGGGTTGTGAGATGCAGGTGATACCTGATCCAACTACTGTCCATTACCATCTACCGGATAATCTTTCAGTTCGAGTACACAGAGAATACAGTGAATTTATTTCAGAACTTACTGCTAAATTTCCCCATGAAAAGAATGGGATCCTAAAATTCTTCGGTGAATGTTGGAAGGTTTTCAATGCCTTGAACTCTTTGGAACTGAAGTCACTCGAGGAGCCTATCTATCTTTTTGGACAGTTCTTTCAGAAGCCTCTTGAATGCTTGACACTAGGAACTTTATCCATTGCAGCCTATTATTTGCCTCAAAATGCTGGGGACATAGCTCGTAGGTACATTCAGGATCCCCAACTGTTGTCTTTCATTGATGCGGAGTGTTTTATTGTGAGCACAGTCAAGGCTTTGCAGACACCGATGATCAATGCGAGCATGGTGATGTGTGACAGGCATTATGGTGGAATTAACTACCCTGTTGGTGGCGTTGGGGGAATTGCAAAGTCCTTGGCAAAAGGTCTGGTGGAGCAGGGCAGTGAGATACTTTACAAGGCCAATGTTACTGGCATCATACTTGATCAGGGCAGAGCTATTGGAGTAAGGCTTTCAGACAAGAGGGAATTTTTTGCCAAAACCATAATATCAAATGCCACAAGATGGGATACCTTTGGAATCTTATTACCTGCAACTATATTTTCAGGAAAGCTGTTAAAAGAAGAAGACCTTCCAAAAGAAGAGGAAAACTTTCAGAAACTTTATGTTAAGGCACCATCTTTTCTTTCCATACACATGGGGGTAAAATCTGATGTTCTGCCACCAGATACAGATTGCCACCATTTTGTGCTTGAGGATGATTGGGCAAGGTTAGAGGAGCCATACGGAAGTATATTTTTAAGCATTCCAACTATTCTTGATCCATCGTTATGCCCAGAAGGGCGGCATATTCTTCACATATTTACAACCTCTTCCATTGAGGACTGGGAGGGACTCTCTCGAAAGGACTATGAAGCAAAGAAGGAGCGTGTGGCAGATGAAATCATTAGCAGATTAGAGAAAAAACTATTTCCAGGGCTCAAGTCATCCATCGTTTTTAAGGAGGTAATGCAGTACCCTAGCACTACTAAGAAAATCAAAGCCGTTCAGATACATGACAATAGGGTGGGAACGCCAAAGACACACAGGCGGTACCTGGCTCGTGAACAGGGTACTTATGGACCGTTACCACGCAGAACTCCTAAGGGCTTATTGGGAATGCCATTCAATACAACAGCCATAGATGGTCTTTACTGTGTTGGTGATAGCTGCTTTCCGGGACAAGGTGTTATAGCTGTATCCTTCTCAGGAGTAATGTGTGCTCATCGTGTAGCTGCTGATATAGGTATTCTCAAGGCTAATGAATCTATTTTACCCCTGATTTTTCTTCTCTCCCTCCCTCTCCCTGCCACCACCCCTCCCCATCTCTTCCCTTCCGTTAAAGCATGGAAAAGAGGCGCCATGGATGCTTCCAGTCTGCTCTTTCTGAACTATAAAGAGGCATCATGGGCTCCTCTCTTGTCAGAGACTGCTGCATTAGATCAGGGTCTTGAGAAGAAGTCTCCAGTACTGGATGCTGCCCTTCTTGGACTACTTGGGTGGTTTAGGACATTAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008152 GO:0016491 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

731

Amino Acids

80.7

Weight (kDa)

8.42

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	112 - 393	3.4e-07	FAD dependent oxidoreductase
NAD_binding_8	PF13450	115 - 176	2.3e-13	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	120 - 532	5.3e-16	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003452)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06820 AT1G06820 AT1G06820 AT1G06820
fragaria_vesca	FvH4_6g21000 FvH4_6g21000 FvH4_6g21000
malus_domestica	MD12G1045500.v1.1 MD12G1045600.v1.1 MD14G1044400.v1.1
prunus_persica	Prupe.7G089400_v2.0.a1 Prupe.7G089400_v2.0.a1 Prupe.7G089400_v2.0.a1
pyrus_communis	pycom14g03760
rosa_chinensis	RchiOBHm_Chr3g0477381 RchiOBHm_Chr7g0212011
rosa_laevigata	RLG00000002945 RLG00000023727
rosa_multiflora	Rmu_sc0014812.1_g000005 Rmu_ssc0000341.1_g000031
rosa_roxburghii	Rroxscaffold_3G00247190 Rroxscaffold_6G00404240 Rroxscaffold_6G00404710
rosa_rugosa	Rorug03G0159700 Rorug03G0159700 Rorug03G0159800
rosa_samantha	Rh3AG210300 Rh3AG210500 Rh3BG243700 Rh3DG237200 Rh3DG237300 Rh7AG263000 Rh7CG279600
rosa_wichuraiana	Rw0G000310 Rw0G000320 Rw7G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	46, 305, 559
AasI	GACNNNNNNGTC	1 cut(s)	126
Acc36I	ACCTGC	4 cut(s)	46, 305, 559, 1234
Acc65I	GGTACC	1 cut(s)	1728
AccB1I	GGYRCC	4 cut(s)	398, 1309, 1728, 2033
AccB7I	CCANNNNNTGG	1 cut(s)	1200
AciI	CCGC	3 cut(s)	920, 1480, 1726
AclWI	GGATC	6 cut(s)	575, 688, 701, 887, 900, 1451
AcoI	YGGCCR	1 cut(s)	85
AcsI	RAATTY	5 cut(s)	235, 647, 671, 701, 1163
AcuI	CTGAAG	1 cut(s)	773
AcyI	GRCGYC	1 cut(s)	2034
AfaI	GTAC	7 cut(s)	452, 630, 884, 1652, 1730, 1750, 2145
AfiI	CCNNNNNNNGG	5 cut(s)	107, 607, 1025, 1200, 1859
AgsI	TTSAA	6 cut(s)	208, 273, 730, 739, 809, 1804
AjnI	CCWGG	3 cut(s)	433, 1609, 1731
AluBI	AGCT	8 cut(s)	252, 377, 875, 1133, 1249, 1845, 1871, 1910
AluI	AGCT	8 cut(s)	252, 377, 875, 1133, 1249, 1845, 1871, 1910
Alw21I	GWGCWC	2 cut(s)	941, 1900
Alw26I	GTCTC	2 cut(s)	2096, 2142
AlwI	GGATC	6 cut(s)	575, 688, 701, 887, 900, 1451
AlwNI	CAGNNNCTG	1 cut(s)	2105
Ama87I	CYCGRG	1 cut(s)	761
AoxI	GGCC	2 cut(s)	85, 1095
ApeKI	GCWGC	7 cut(s)	374, 548, 839, 1845, 1910, 2108, 2153
ApoI	RAATTY	5 cut(s)	235, 647, 671, 701, 1163
Asp700I	GAANNNNTTC	3 cut(s)	725, 1266, 1287
Asp718I	GGTACC	1 cut(s)	1728
AspLEI	GCGC	1 cut(s)	2036
AspS9I	GGNCC	2 cut(s)	264, 1757
AsuC2I	CCSGG	1 cut(s)	1854
AsuHPI	GGTGA	5 cut(s)	59, 583, 722, 994, 1850
AsuII	TTCGAA	1 cut(s)	239
AvaI	CYCGRG	1 cut(s)	761
AvaII	GGWCC	2 cut(s)	264, 1757
AxyI	CCTNAGG	1 cut(s)	1779
BalI	TGGCCA	1 cut(s)	87
BamHI	GGATCC	2 cut(s)	693, 892
BanI	GGYRCC	4 cut(s)	398, 1309, 1728, 2033
BanII	GRGCYC	2 cut(s)	1617, 2089
BauI	CACGAG	1 cut(s)	1737
BbsI	GAAGAC	2 cut(s)	480, 1269
Bbv12I	GWGCWC	2 cut(s)	941, 1900
BbvI	GCAGC	7 cut(s)	386, 560, 851, 1832, 1897, 2095, 2140
BccI	CCATC	9 cut(s)	299, 458, 609, 1194, 1321, 1468, 1634, 1814, 2007
BceAI	ACGGC	1 cut(s)	1664
BciT130I	CCWGG	3 cut(s)	435, 1611, 1733
BciVI	GTATCC	2 cut(s)	1198, 1885
BclI	TGATCA	2 cut(s)	966, 1120
BcnI	CCSGG	1 cut(s)	1854
BcoDI	GTCTC	2 cut(s)	2096, 2142
BfaI	CTAG	3 cut(s)	20, 821, 1656
BfoI	RGCGCY	1 cut(s)	2037
BfuAI	ACCTGC	4 cut(s)	46, 305, 559, 1234
BfuI	GTATCC	2 cut(s)	1198, 1885
BisI	GCNGC	8 cut(s)	375, 549, 840, 1481, 1846, 1911, 2109, 2154
BlsI	GCNGC	8 cut(s)	376, 550, 841, 1482, 1847, 1912, 2110, 2155
BmcAI	AGTACT	1 cut(s)	2145
Bme1390I	CCNGG	4 cut(s)	435, 1611, 1733, 1854
Bme18I	GGWCC	2 cut(s)	264, 1757
BmeT110I	CYCGRG	1 cut(s)	761
BmgT120I	GGNCC	2 cut(s)	264, 1757
BmiI	GGNNCC	9 cut(s)	400, 695, 768, 894, 1311, 1416, 1730, 2035, 2088
BmrFI	CCNGG	4 cut(s)	435, 1611, 1733, 1854
BmrI	ACTGGG	2 cut(s)	57, 1531
BmsI	GCATC	7 cut(s)	325, 555, 907, 1119, 2032, 2087, 2140
BmuI	ACTGGG	2 cut(s)	57, 1531
BpiI	GAAGAC	2 cut(s)	480, 1269
BplI	GAGNNNNNCTC	2 cut(s)	1517, 1549
BpmI	CTGGAG	1 cut(s)	2124
Bpu14I	TTCGAA	1 cut(s)	239
BpuEI	CTTGAG	4 cut(s)	1409, 1601, 1913, 2147
BpuMI	CCSGG	1 cut(s)	1854
BsaHI	GRCGYC	1 cut(s)	2034
BsaJI	CCNNGG	4 cut(s)	402, 1050, 1610, 2037
BsaWI	WCCGGW	1 cut(s)	607
BsaXI	ACNNNNNCTCC	4 cut(s)	354, 384, 1978, 2008
Bsc4I	CCNNNNNNNGG	5 cut(s)	107, 607, 1025, 1200, 1859
Bse1I	ACTGG	8 cut(s)	63, 76, 267, 1111, 1526, 2049, 2141, 2151
Bse21I	CCTNAGG	1 cut(s)	1779
Bse3DI	GCAATG	1 cut(s)	834
BseBI	CCWGG	3 cut(s)	435, 1611, 1733
BseDI	CCNNGG	4 cut(s)	402, 1050, 1610, 2037
BseGI	GGATG	6 cut(s)	161, 469, 1399, 1622, 2047, 2155
BseLI	CCNNNNNNNGG	5 cut(s)	107, 607, 1025, 1200, 1859
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	2 cut(s)	68, 1896
BseNI	ACTGG	8 cut(s)	63, 76, 267, 1111, 1526, 2049, 2141, 2151
BseRI	GAGGAG	3 cut(s)	779, 1427, 2079
BseXI	GCAGC	7 cut(s)	386, 560, 851, 1832, 1897, 2095, 2140
BseYI	CCCAGC	1 cut(s)	863
BshFI	GGCC	2 cut(s)	87, 1097
BshNI	GGYRCC	4 cut(s)	398, 1309, 1728, 2033
BsiHKAI	GWGCWC	2 cut(s)	941, 1900
BsiHKCI	CYCGRG	1 cut(s)	761
BsiSI	CCGG	2 cut(s)	608, 1853
BslFI	GGGAC	4 cut(s)	84, 881, 1542, 1869
BslI	CCNNNNNNNGG	5 cut(s)	107, 607, 1025, 1200, 1859
BsmAI	GTCTC	2 cut(s)	2096, 2142
BsmFI	GGGAC	4 cut(s)	84, 881, 1542, 1869
BsmI	GAATGC	3 cut(s)	815, 1440, 1800
BsnI	GGCC	2 cut(s)	87, 1097
BsoBI	CYCGRG	1 cut(s)	761
Bsp119I	TTCGAA	1 cut(s)	239
Bsp1286I	GDGCHC	4 cut(s)	941, 1617, 1900, 2089
Bsp143I	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
Bsp19I	CCATGG	1 cut(s)	2037
BspACI	CCGC	3 cut(s)	920, 1480, 1726
BspANI	GGCC	2 cut(s)	87, 1097
BspCNI	CTCAG	2 cut(s)	67, 1895
BspLI	GGNNCC	9 cut(s)	400, 695, 768, 894, 1311, 1416, 1730, 2035, 2088
BspMI	ACCTGC	4 cut(s)	46, 305, 559, 1234
BspPI	GGATC	6 cut(s)	575, 688, 701, 887, 900, 1451
BspT104I	TTCGAA	1 cut(s)	239
BspT107I	GGYRCC	4 cut(s)	398, 1309, 1728, 2033
BsrDI	GCAATG	1 cut(s)	834
BsrI	ACTGG	8 cut(s)	63, 76, 267, 1111, 1526, 2049, 2141, 2151
BssECI	CCNNGG	4 cut(s)	402, 1050, 1610, 2037
BssMI	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
BssNI	GRCGYC	1 cut(s)	2034
BssSI	CACGAG	1 cut(s)	1737
BssT1I	CCWWGG	3 cut(s)	402, 1050, 2037
Bst2BI	CACGAG	1 cut(s)	1737
Bst2UI	CCWGG	3 cut(s)	435, 1611, 1733
Bst4CI	ACNGT	8 cut(s)	384, 592, 644, 789, 903, 943, 1761, 1832
Bst6I	CTCTTC	4 cut(s)	317, 1272, 1513, 2009
BstACI	GRCGYC	1 cut(s)	2034
BstBI	TTCGAA	1 cut(s)	239
BstC8I	GCNNGC	1 cut(s)	976
BstDEI	CTNAG	4 cut(s)	54, 1665, 1779, 1882
BstDSI	CCRYGG	1 cut(s)	2037
BstF5I	GGATG	6 cut(s)	161, 469, 1399, 1622, 2047, 2155
BstH2I	RGCGCY	1 cut(s)	2037
BstHHI	GCGC	1 cut(s)	2036
BstKTI	GATC	7 cut(s)	583, 696, 895, 969, 1123, 1459, 2119
BstMAI	GTCTC	2 cut(s)	2096, 2142
BstMBI	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
BstMWI	GCNNNNNNNGC	4 cut(s)	516, 548, 2042, 2084
BstNI	CCWGG	3 cut(s)	435, 1611, 1733
BstSCI	CCNGG	4 cut(s)	433, 1609, 1731, 1852
BstV1I	GCAGC	7 cut(s)	386, 560, 851, 1832, 1897, 2095, 2140
BstV2I	GAAGAC	2 cut(s)	480, 1269
BstX2I	RGATCY	2 cut(s)	693, 892
BstXI	CCANNNNNNTGG	3 cut(s)	83, 409, 1333
BstYI	RGATCY	2 cut(s)	693, 892
Bsu36I	CCTNAGG	1 cut(s)	1779
BsuI	GTATCC	2 cut(s)	1198, 1885
BsuRI	GGCC	2 cut(s)	87, 1097
BtgI	CCRYGG	1 cut(s)	2037
BtsCI	GGATG	6 cut(s)	161, 469, 1399, 1622, 2047, 2155
BtsI	GCAGTG	3 cut(s)	264, 558, 1084
BtsIMutI	CAGTG	4 cut(s)	264, 558, 649, 1084
BveI	ACCTGC	4 cut(s)	46, 305, 559, 1234
Cac8I	GCNNGC	1 cut(s)	976
CaiI	CAGNNNCTG	1 cut(s)	2105
CfoI	GCGC	1 cut(s)	2036
Cfr13I	GGNCC	2 cut(s)	264, 1757
Csp6I	GTAC	7 cut(s)	451, 629, 883, 1651, 1729, 1749, 2144
CviQI	GTAC	7 cut(s)	451, 629, 883, 1651, 1729, 1749, 2144
DdeI	CTNAG	4 cut(s)	54, 1665, 1779, 1882
DinI	GGCGCC	1 cut(s)	2035
DpnI	GATC	7 cut(s)	582, 695, 894, 968, 1122, 1458, 2118
DpnII	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
DrdI	GACNNNNNNGTC	1 cut(s)	126
DseDI	GACNNNNNNGTC	1 cut(s)	126
EaeI	YGGCCR	1 cut(s)	85
Eam1104I	CTCTTC	4 cut(s)	317, 1272, 1513, 2009
EarI	CTCTTC	4 cut(s)	317, 1272, 1513, 2009
Eco130I	CCWWGG	3 cut(s)	402, 1050, 2037
Eco24I	GRGCYC	2 cut(s)	1617, 2089
Eco47I	GGWCC	2 cut(s)	264, 1757
Eco57I	CTGAAG	1 cut(s)	773
Eco81I	CCTNAGG	1 cut(s)	1779
Eco88I	CYCGRG	1 cut(s)	761
EcoRI	GAATTC	1 cut(s)	235
EcoRII	CCWGG	3 cut(s)	433, 1609, 1731
EcoT14I	CCWWGG	3 cut(s)	402, 1050, 2037
EcoT38I	GRGCYC	2 cut(s)	1617, 2089
EgeI	GGCGCC	1 cut(s)	2035
EheI	GGCGCC	1 cut(s)	2035
ErhI	CCWWGG	3 cut(s)	402, 1050, 2037
FalI	AAGNNNNNCTT	2 cut(s)	1251, 1283
FaqI	GGGAC	4 cut(s)	84, 881, 1542, 1869
FbaI	TGATCA	2 cut(s)	966, 1120
Fnu4HI	GCNGC	8 cut(s)	375, 549, 840, 1481, 1846, 1911, 2109, 2154
FokI	GGATG	6 cut(s)	168, 476, 1406, 1609, 2054, 2162
FriOI	GRGCYC	2 cut(s)	1617, 2089
Fsp4HI	GCNGC	8 cut(s)	375, 549, 840, 1481, 1846, 1911, 2109, 2154
FspBI	CTAG	3 cut(s)	20, 821, 1656
GlaI	GCGC	1 cut(s)	2035
GluI	GCNGC	8 cut(s)	375, 549, 840, 1481, 1846, 1911, 2109, 2154
GsaI	CCCAGC	1 cut(s)	867
GsuI	CTGGAG	1 cut(s)	2124
HaeII	RGCGCY	1 cut(s)	2037
HaeIII	GGCC	2 cut(s)	87, 1097
HapII	CCGG	2 cut(s)	608, 1853
HhaI	GCGC	1 cut(s)	2036
Hin1I	GRCGYC	1 cut(s)	2034
Hin6I	GCGC	1 cut(s)	2034
HinP1I	GCGC	1 cut(s)	2034
HincII	GTYRAC	1 cut(s)	131
HindII	GTYRAC	1 cut(s)	131
HinfI	GANTC	7 cut(s)	97, 184, 208, 430, 1215, 1530, 1940
HpaII	CCGG	2 cut(s)	608, 1853
HphI	GGTGA	5 cut(s)	59, 583, 722, 994, 1850
Hpy166II	GTNNAC	3 cut(s)	131, 631, 1742
Hpy188I	TCNGA	9 cut(s)	96, 658, 798, 1153, 1293, 1348, 1686, 2064, 2101
Hpy188III	TCNNGA	8 cut(s)	806, 890, 1242, 1454, 1536, 1739, 1884, 2126
Hpy8I	GTNNAC	3 cut(s)	131, 631, 1742
HpyAV	CCTTC	9 cut(s)	192, 388, 715, 1277, 1469, 1552, 1888, 2019, 2168
HpyCH4III	ACNGT	8 cut(s)	384, 592, 644, 789, 903, 943, 1761, 1832
HpyF10VI	GCNNNNNNNGC	4 cut(s)	516, 548, 2042, 2084
HpyF3I	CTNAG	4 cut(s)	54, 1665, 1779, 1882
Hsp92I	GRCGYC	1 cut(s)	2034
HspAI	GCGC	1 cut(s)	2034
KasI	GGCGCC	1 cut(s)	2033
KpnI	GGTACC	1 cut(s)	1732
Ksp22I	TGATCA	2 cut(s)	966, 1120
Kzo9I	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
LmnI	GCTCC	6 cut(s)	249, 766, 1069, 1414, 1561, 2092
Lsp1109I	GCAGC	7 cut(s)	386, 560, 851, 1832, 1897, 2095, 2140
LweI	GCATC	7 cut(s)	325, 555, 907, 1119, 2032, 2087, 2140
MaeI	CTAG	3 cut(s)	20, 821, 1656
MaeIII	GTNAC	6 cut(s)	65, 158, 756, 989, 1102, 1761
MalI	GATC	7 cut(s)	582, 695, 894, 968, 1122, 1458, 2118
MboI	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
MflI	RGATCY	2 cut(s)	693, 892
MhlI	GDGCHC	4 cut(s)	941, 1617, 1900, 2089
MlsI	TGGCCA	1 cut(s)	87
MluCI	AATT	9 cut(s)	203, 235, 244, 647, 671, 701, 1008, 1038, 1163
MluNI	TGGCCA	1 cut(s)	87
Mly113I	GGCGCC	1 cut(s)	2034
MlyI	GAGTC	3 cut(s)	106, 178, 1524
MmeI	TCCRAC	4 cut(s)	276, 608, 698, 1469
Mox20I	TGGCCA	1 cut(s)	87
MroXI	GAANNNNTTC	3 cut(s)	725, 1266, 1287
MscI	TGGCCA	1 cut(s)	87
MseI	TTAA	7 cut(s)	168, 1011, 1253, 1305, 1436, 1635, 2016
MslI	CAYNNNNRTG	5 cut(s)	983, 1002, 1331, 1465, 2191
Msp20I	TGGCCA	1 cut(s)	87
MspI	CCGG	2 cut(s)	608, 1853
MspR9I	CCNGG	4 cut(s)	435, 1611, 1733, 1854
Mva1269I	GAATGC	3 cut(s)	815, 1440, 1800
MvaI	CCWGG	3 cut(s)	435, 1611, 1733
MwoI	GCNNNNNNNGC	4 cut(s)	516, 548, 2042, 2084
NarI	GGCGCC	1 cut(s)	2034
NciI	CCSGG	1 cut(s)	1854
NcoI	CCATGG	1 cut(s)	2037
NdeII	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
NlaIV	GGNNCC	9 cut(s)	400, 695, 768, 894, 1311, 1416, 1730, 2035, 2088
NmuCI	GTSAC	3 cut(s)	65, 756, 989
NspV	TTCGAA	1 cut(s)	239
PaeR7I	CTCGAG	1 cut(s)	761
PaqCI	CACCTGC	3 cut(s)	46, 305, 559
PcsI	WCGNNNNNNNCGW	1 cut(s)	507
PctI	GAATGC	3 cut(s)	815, 1440, 1800
PdmI	GAANNNNTTC	3 cut(s)	725, 1266, 1287
PfeI	GAWTC	4 cut(s)	208, 430, 1215, 1940
PflMI	CCANNNNNTGG	1 cut(s)	1200
PfoI	TCCNGGA	1 cut(s)	1852
PkrI	GCNGC	8 cut(s)	376, 550, 841, 1482, 1847, 1912, 2110, 2155
PleI	GAGTC	3 cut(s)	105, 178, 1524
PluTI	GGCGCC	1 cut(s)	2037
PpsI	GAGTC	3 cut(s)	105, 178, 1524
Psp6I	CCWGG	3 cut(s)	433, 1609, 1731
PspFI	CCCAGC	1 cut(s)	863
PspGI	CCWGG	3 cut(s)	433, 1609, 1731
PspN4I	GGNNCC	9 cut(s)	400, 695, 768, 894, 1311, 1416, 1730, 2035, 2088
PspPI	GGNCC	2 cut(s)	264, 1757
PspXI	VCTCGAGB	1 cut(s)	761
PstNI	CAGNNNCTG	1 cut(s)	2105
PsuI	RGATCY	2 cut(s)	693, 892
RsaI	GTAC	7 cut(s)	452, 630, 884, 1652, 1730, 1750, 2145
RsaNI	GTAC	7 cut(s)	451, 629, 883, 1651, 1729, 1749, 2144
RseI	CAYNNNNRTG	5 cut(s)	983, 1002, 1331, 1465, 2191
SaqAI	TTAA	7 cut(s)	168, 1011, 1253, 1305, 1436, 1635, 2016
SatI	GCNGC	8 cut(s)	375, 549, 840, 1481, 1846, 1911, 2109, 2154
Sau3AI	GATC	7 cut(s)	580, 693, 892, 966, 1120, 1456, 2116
Sau96I	GGNCC	2 cut(s)	264, 1757
ScaI	AGTACT	1 cut(s)	2145
SchI	GAGTC	3 cut(s)	106, 178, 1524
ScrFI	CCNGG	4 cut(s)	435, 1611, 1733, 1854
SduI	GDGCHC	4 cut(s)	941, 1617, 1900, 2089
SfaNI	GCATC	7 cut(s)	325, 555, 907, 1119, 2032, 2087, 2140
SfoI	GGCGCC	1 cut(s)	2035
Sfr274I	CTCGAG	1 cut(s)	761
SfuI	TTCGAA	1 cut(s)	239
SinI	GGWCC	2 cut(s)	264, 1757
SlaI	CTCGAG	1 cut(s)	761
SmiMI	CAYNNNNRTG	5 cut(s)	983, 1002, 1331, 1465, 2191
SmlI	CTYRAG	5 cut(s)	761, 1388, 1616, 1928, 2126
SmoI	CTYRAG	5 cut(s)	761, 1388, 1616, 1928, 2126
Sse9I	AATT	9 cut(s)	203, 235, 244, 647, 671, 701, 1008, 1038, 1163
SsiI	CCGC	3 cut(s)	920, 1480, 1726
SspDI	GGCGCC	1 cut(s)	2033
SspMI	CTAG	3 cut(s)	20, 821, 1656
StyD4I	CCNGG	4 cut(s)	433, 1609, 1731, 1852
StyI	CCWWGG	3 cut(s)	402, 1050, 2037
TaaI	ACNGT	8 cut(s)	384, 592, 644, 789, 903, 943, 1761, 1832
TaqI	TCGA	5 cut(s)	239, 477, 625, 762, 1537
TasI	AATT	9 cut(s)	203, 235, 244, 647, 671, 701, 1008, 1038, 1163
TatI	WGTACW	2 cut(s)	628, 2143
TauI	GCSGC	1 cut(s)	1483
TfiI	GAWTC	4 cut(s)	208, 430, 1215, 1940
Tru1I	TTAA	7 cut(s)	168, 1011, 1253, 1305, 1436, 1635, 2016
Tru9I	TTAA	7 cut(s)	168, 1011, 1253, 1305, 1436, 1635, 2016
TscAI	CASTG	4 cut(s)	264, 558, 649, 1084
TseFI	GTSAC	3 cut(s)	65, 756, 989
TseI	GCWGC	7 cut(s)	374, 548, 839, 1845, 1910, 2108, 2153
Tsp45I	GTSAC	3 cut(s)	65, 756, 989
TspDTI	ATGAA	5 cut(s)	696, 901, 1563, 1590, 1953
TspGWI	ACGGA	2 cut(s)	1437, 2002
TspRI	CASTG	4 cut(s)	264, 558, 649, 1084
Van91I	CCANNNNNTGG	1 cut(s)	1200
VpaK11BI	GGWCC	2 cut(s)	264, 1757
XapI	RAATTY	5 cut(s)	235, 647, 671, 701, 1163
XcmI	CCANNNNNNNNNTGG	1 cut(s)	686
XhoI	CTCGAG	1 cut(s)	761
XmnI	GAANNNNTTC	3 cut(s)	725, 1266, 1287
XspI	CTAG	3 cut(s)	20, 821, 1656
ZrmI	AGTACT	1 cut(s)	2145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.