Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0009319

Physical Location & Seq

Genomic Coordinates Reverse (-)

47691455 .. 47698475

Gene Structure 7021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00427100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGAAACCTGATACAGAGACATATAATTGGGTGATTCAAGCATATACCAGAGCTGAATCTTATGATAGAGTGCAAGATGTTGCTGAGTTACTTGGCCTGATGGTTGAAGACCACAAGCGTTTGCAGCCTAATGTGAAAACCTATGCGTTGCTGATTGAGTGCTTTACCAAGTATTGTGTAGTGCGAGAAGCAATACGGCATTTTCGTGCTCTCAAATTTTTTGAAGGAGGGACAAAAGTTTTACATAATGAAGGAAACTTTGGGGACCCCTTATCTTTGTATCTTCGAGCTTTATGTCGAGAAGGAAGAGTGGTTGAGTTGCTAGAAGCTTTAGAAGCCATGGCCCAAGACAACCAGCCAATTCCACCGCGAGCCATGATATTGAGCAGAAAGTATCGAACCCTGGTGAGCTCATGGATTGAACCTTTGCAAGAGGAAGCTGAACTTGGATATGAGATTGATTACATGGCCAGGTACATTGCAGAGGGAGGGCTTACTGGTGAACGCAAGCGATGGGTGCCTCGAAGAGGGAAAACTCCACTAGATCCTGACGCTGATGGTTTTATATATTCTAACCCTATGGAAACCTCATTCAAACAACGGTGTCTTGAGGATTTGAAGACACACCACAGAAAGCTCTTGAGAACTTTACAGAATGAAGGACTTGCAGCTTTAGGGGATGCATCTGAATCAGATTATATTAGAGTAGAGAATAGGTTAAGGAAGATCATAAAGGGTCCTGACCAGAGTGTTTTAAAGCCCAAAGCTGCTAGTAAGATGGTAGTATCTGAACTGAAGGAAGAACTAGAAGCTCAGGATCTGCCAACTGATGGAACTAGAAATGTGCTTTACCAGCGAGTCCAAAAAGCAAGGAGGATAAATCGCTCTCGTGGTCGACCCCTCTGGGTTCCTCCTGTGGAGGAGGAGGAAGAAGAGGTTGATGAAGAGCTGGATGAACTAATCTCAAGGATCAAGCTGGAAGAAGGGAATACAGAGTTCTGGAAACGCCGTTTCCTTGGAGAAGGCTTCAGCAGCGATCAGGAAAAGCAATTAGATAGTGGCAAACTTGAACCTCTAGATGTCACAGATAGTGTCAATGTTGTAGATGTGGCGAAAGAGGTTGAAGATGATGAGGCTGAGGAAGCTGAGGATGAGGATGAGGATGACAATAATGATAATGATGACGATGACGATGACGACGACGACGAAGAGGAGGAGGAGGAGGAAGTAGAGGTGGGGGTAGAAGTAGAACAAGCTGAGAGACAAGATGTAGAAAGGGTGAAGCAAAAGGAAAATGAAGCTAAGAAGCCTCTTCAAATGATTGGAGTACAGTTGTTAAAAGATTCTGACCAGACGAGTACATCATCTAAAAAGTTAAGGAGAAGAGCTTCTCGAAGAATATCAGCTGAGACTTTCAGTTTTAGTCACCCTGAGGATTCAAACAGTAATAGGCCACCAAGATTCTTTCTCAGTTCTGGTCCATTGGAAGACTATTGCCCCTTACATACCCTTGGTGATGGAATTGGGGGAACACCCACAATTGGGGATTGTGCCATGATTTTGCGTGCAGCCATAAAGGCTCCTCTCCCTTCAGCTTTCTTGAAGATCTTACAGACTACACATAGTCTTGGCTATGTATTTGGCAGTCCACTCTATGATGAAATTATCTCGCTATGCCTTGATCTTGGAGAGCTGGATGCAGCCGTTGCCATTGTTGCAGACTTGGAGACCACTGGGATCAAAGTCCCAGACGAGACCTTGGACAGGGTAATTTCTGCTAAACGGACAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SAP

Protein Analysis

597

Amino Acids

67.84

Weight (kDa)

4.68

Isoelectric Point (pI)

51.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAP	PF02037	258 - 291	2e-08	SAP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04260
fragaria_vesca	FvH4_6g01350 FvH4_6g01350 FvH4_6g01350 FvH4_6g01352
malus_domestica	MD04G1234900.v1.1
prunus_persica	Prupe.6G354700_v2.0.a1 Prupe.6G354700_v2.0.a1
pyrus_communis	pycom04g20830 pycom04g20860
rosa_chinensis	RchiOBHm_Chr3g0448921
rosa_laevigata	RLG00000025866
rosa_multiflora	Rmu_sc0003116.1_g000017
rosa_roxburghii	Rroxscaffold_6G00427100
rosa_rugosa	Rorug02G0617100
rosa_samantha	Rh3AG015500 Rh3BG015500 Rh3BG015600 Rh3CG014400 Rh3CG014600 Rh3DG015900
rosa_wichuraiana	Rw3G001150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	517
AccB7I	CCANNNNNTGG	1 cut(s)	830
AccI	GTMKAC	1 cut(s)	895
AccII	CGCG	1 cut(s)	370
AciI	CCGC	1 cut(s)	368
AclWI	GGATC	4 cut(s)	539, 825, 977, 1745
AcoI	YGGCCR	1 cut(s)	468
AcsI	RAATTY	1 cut(s)	215
AcuI	CTGAAG	3 cut(s)	815, 1012, 1575
AfaI	GTAC	3 cut(s)	476, 1329, 1360
AfiI	CCNNNNNNNGG	5 cut(s)	527, 830, 1541, 1542, 1764
AjnI	CCWGG	2 cut(s)	402, 470
AjuI	GAANNNNNNNTTGG	4 cut(s)	243, 275, 429, 461
Alw21I	GWGCWC	2 cut(s)	211, 413
Alw26I	GTCTC	5 cut(s)	11, 1255, 1403, 1721, 1748
AlwI	GGATC	4 cut(s)	539, 825, 977, 1745
AlwNI	CAGNNNCTG	1 cut(s)	820
AoxI	GGCC	4 cut(s)	94, 342, 468, 1451
ApeKI	GCWGC	6 cut(s)	124, 668, 767, 1032, 1568, 1700
ApoI	RAATTY	1 cut(s)	215
Asp700I	GAANNNNTTC	1 cut(s)	1387
AspS9I	GGNCC	4 cut(s)	265, 343, 737, 1478
AsuHPI	GGTGA	6 cut(s)	43, 418, 512, 1291, 1418, 1526
AvaII	GGWCC	3 cut(s)	265, 737, 1478
AxyI	CCTNAGG	1 cut(s)	1431
BalI	TGGCCA	1 cut(s)	470
BanI	GGYRCC	1 cut(s)	517
BanII	GRGCYC	1 cut(s)	413
BauI	CACGAG	1 cut(s)	888
BbsI	GAAGAC	3 cut(s)	114, 626, 1494
Bbv12I	GWGCWC	2 cut(s)	211, 413
BbvCI	CCTCAGC	2 cut(s)	1137, 1146
BbvI	GCAGC	6 cut(s)	136, 680, 754, 1044, 1580, 1712
BccI	CCATC	6 cut(s)	94, 507, 551, 772, 824, 1511
BceAI	ACGGC	3 cut(s)	212, 993, 1688
BciT130I	CCWGG	2 cut(s)	404, 472
BcoDI	GTCTC	5 cut(s)	11, 1255, 1403, 1721, 1748
BfaI	CTAG	6 cut(s)	323, 542, 771, 806, 837, 1076
BglI	GCCNNNNNGGC	1 cut(s)	1577
BglII	AGATCT	1 cut(s)	1605
BisI	GCNGC	6 cut(s)	125, 669, 768, 1033, 1569, 1701
BlsI	GCNGC	6 cut(s)	126, 670, 769, 1034, 1570, 1702
Bme1390I	CCNGG	2 cut(s)	404, 472
Bme18I	GGWCC	3 cut(s)	265, 737, 1478
BmgT120I	GGNCC	4 cut(s)	265, 343, 737, 1478
BmiI	GGNNCC	6 cut(s)	266, 267, 519, 738, 909, 1581
BmrFI	CCNGG	2 cut(s)	404, 472
BmrI	ACTGGG	1 cut(s)	1743
BmsI	GCATC	3 cut(s)	670, 692, 1687
BmuI	ACTGGG	1 cut(s)	1743
BpiI	GAAGAC	3 cut(s)	114, 626, 1494
Bpu10I	CCTNAGC	3 cut(s)	813, 1137, 1146
BpuEI	CTTGAG	3 cut(s)	629, 661, 949
BsaI	GGTCTC	2 cut(s)	1721, 1748
BsaJI	CCNNGG	5 cut(s)	339, 402, 1015, 1510, 1758
Bsc4I	CCNNNNNNNGG	5 cut(s)	527, 830, 1541, 1542, 1764
Bse1I	ACTGG	2 cut(s)	502, 1738
Bse21I	CCTNAGG	1 cut(s)	1431
Bse3DI	GCAATG	1 cut(s)	477
BseBI	CCWGG	2 cut(s)	404, 472
BseDI	CCNNGG	5 cut(s)	339, 402, 1015, 1510, 1758
BseGI	GGATG	6 cut(s)	685, 958, 1156, 1162, 1168, 1702
BseLI	CCNNNNNNNGG	5 cut(s)	527, 830, 1541, 1542, 1764
BseMI	GCAATG	1 cut(s)	477
BseMII	CTCAG	8 cut(s)	75, 827, 1128, 1137, 1248, 1398, 1422, 1483
BseNI	ACTGG	2 cut(s)	502, 1738
BseRI	GAGGAG	7 cut(s)	935, 938, 1226, 1229, 1232, 1235, 1572
BseXI	GCAGC	6 cut(s)	136, 680, 754, 1044, 1580, 1712
BsgI	GTGCAG	1 cut(s)	1587
Bsh1236I	CGCG	1 cut(s)	370
BshFI	GGCC	4 cut(s)	96, 344, 470, 1453
BshNI	GGYRCC	1 cut(s)	517
BsiHKAI	GWGCWC	2 cut(s)	211, 413
BslFI	GGGAC	3 cut(s)	244, 278, 1730
BslI	CCNNNNNNNGG	5 cut(s)	527, 830, 1541, 1542, 1764
BsmAI	GTCTC	5 cut(s)	11, 1255, 1403, 1721, 1748
BsmFI	GGGAC	3 cut(s)	244, 278, 1730
BsnI	GGCC	4 cut(s)	96, 344, 470, 1453
Bso31I	GGTCTC	2 cut(s)	1721, 1748
Bsp1286I	GDGCHC	2 cut(s)	211, 413
Bsp143I	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
Bsp19I	CCATGG	1 cut(s)	339
BspACI	CCGC	1 cut(s)	368
BspANI	GGCC	4 cut(s)	96, 344, 470, 1453
BspCNI	CTCAG	8 cut(s)	76, 826, 1129, 1138, 1249, 1399, 1423, 1482
BspFNI	CGCG	1 cut(s)	370
BspLI	GGNNCC	6 cut(s)	266, 267, 519, 738, 909, 1581
BspPI	GGATC	4 cut(s)	539, 825, 977, 1745
BspQI	GCTCTTC	2 cut(s)	939, 1378
BspT107I	GGYRCC	1 cut(s)	517
BspTNI	GGTCTC	2 cut(s)	1721, 1748
BsrDI	GCAATG	1 cut(s)	477
BsrI	ACTGG	2 cut(s)	502, 1738
BssECI	CCNNGG	5 cut(s)	339, 402, 1015, 1510, 1758
BssMI	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
BssSI	CACGAG	1 cut(s)	888
BssT1I	CCWWGG	4 cut(s)	339, 1015, 1510, 1758
Bst2BI	CACGAG	1 cut(s)	888
Bst2UI	CCWGG	2 cut(s)	404, 472
Bst4CI	ACNGT	3 cut(s)	603, 1332, 1445
Bst6I	CTCTTC	7 cut(s)	301, 520, 927, 939, 1203, 1317, 1378
BstAPI	GCANNNNNTGC	1 cut(s)	1706
BstC8I	GCNNGC	3 cut(s)	372, 509, 1566
BstDEI	CTNAG	9 cut(s)	84, 813, 1137, 1146, 1257, 1302, 1407, 1431, 1469
BstDSI	CCRYGG	1 cut(s)	339
BstENI	CCTNNNNNAGG	2 cut(s)	525, 1762
BstF5I	GGATG	6 cut(s)	685, 958, 1156, 1162, 1168, 1702
BstFNI	CGCG	1 cut(s)	370
BstKTI	GATC	8 cut(s)	547, 729, 820, 972, 1039, 1608, 1684, 1740
BstMAI	GTCTC	5 cut(s)	11, 1255, 1403, 1721, 1748
BstMBI	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
BstMWI	GCNNNNNNNGC	9 cut(s)	124, 335, 517, 853, 1032, 1142, 1577, 1706, 1715
BstNI	CCWGG	2 cut(s)	404, 472
BstSCI	CCNGG	2 cut(s)	402, 470
BstUI	CGCG	1 cut(s)	370
BstV1I	GCAGC	6 cut(s)	136, 680, 754, 1044, 1580, 1712
BstV2I	GAAGAC	3 cut(s)	114, 626, 1494
BstX2I	RGATCY	3 cut(s)	544, 817, 1605
BstYI	RGATCY	3 cut(s)	544, 817, 1605
Bsu36I	CCTNAGG	1 cut(s)	1431
BsuRI	GGCC	4 cut(s)	96, 344, 470, 1453
BtgI	CCRYGG	1 cut(s)	339
BtgZI	GCGATG	1 cut(s)	526
BtsCI	GGATG	6 cut(s)	685, 958, 1156, 1162, 1168, 1702
BtsIMutI	CAGTG	1 cut(s)	1731
Cac8I	GCNNGC	3 cut(s)	372, 509, 1566
CaiI	CAGNNNCTG	1 cut(s)	820
Cfr13I	GGNCC	4 cut(s)	265, 343, 737, 1478
CseI	GACGC	1 cut(s)	560
Csp6I	GTAC	3 cut(s)	475, 1328, 1359
CviAII	CATG	5 cut(s)	340, 376, 414, 466, 1555
CviQI	GTAC	3 cut(s)	475, 1328, 1359
DdeI	CTNAG	9 cut(s)	84, 813, 1137, 1146, 1257, 1302, 1407, 1431, 1469
DpnI	GATC	8 cut(s)	546, 728, 819, 971, 1038, 1607, 1683, 1739
DpnII	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
DraI	TTTAAA	1 cut(s)	756
EaeI	YGGCCR	1 cut(s)	468
Eam1104I	CTCTTC	7 cut(s)	301, 520, 927, 939, 1203, 1317, 1378
EarI	CTCTTC	7 cut(s)	301, 520, 927, 939, 1203, 1317, 1378
Ecl136II	GAGCTC	1 cut(s)	411
Eco130I	CCWWGG	4 cut(s)	339, 1015, 1510, 1758
Eco24I	GRGCYC	1 cut(s)	413
Eco31I	GGTCTC	2 cut(s)	1721, 1748
Eco47I	GGWCC	3 cut(s)	265, 737, 1478
Eco53kI	GAGCTC	1 cut(s)	411
Eco57I	CTGAAG	3 cut(s)	815, 1012, 1575
Eco81I	CCTNAGG	1 cut(s)	1431
EcoICRI	GAGCTC	1 cut(s)	411
EcoNI	CCTNNNNNAGG	2 cut(s)	525, 1762
EcoO109I	RGGNCCY	2 cut(s)	265, 737
EcoRII	CCWGG	2 cut(s)	402, 470
EcoT14I	CCWWGG	4 cut(s)	339, 1015, 1510, 1758
EcoT22I	ATGCAT	1 cut(s)	685
EcoT38I	GRGCYC	1 cut(s)	413
ErhI	CCWWGG	4 cut(s)	339, 1015, 1510, 1758
FaeI	CATG	5 cut(s)	343, 379, 417, 469, 1558
FalI	AAGNNNNNCTT	2 cut(s)	429, 461
FaqI	GGGAC	3 cut(s)	244, 278, 1730
FatI	CATG	5 cut(s)	339, 375, 413, 465, 1554
FblI	GTMKAC	1 cut(s)	895
Fnu4HI	GCNGC	6 cut(s)	125, 669, 768, 1033, 1569, 1701
FokI	GGATG	6 cut(s)	692, 965, 1163, 1169, 1175, 1709
FriOI	GRGCYC	1 cut(s)	413
Fsp4HI	GCNGC	6 cut(s)	125, 669, 768, 1033, 1569, 1701
FspBI	CTAG	6 cut(s)	323, 542, 771, 806, 837, 1076
GluI	GCNGC	6 cut(s)	125, 669, 768, 1033, 1569, 1701
HaeIII	GGCC	4 cut(s)	96, 344, 470, 1453
HgaI	GACGC	1 cut(s)	560
Hin1II	CATG	5 cut(s)	343, 379, 417, 469, 1558
HincII	GTYRAC	1 cut(s)	896
HindII	GTYRAC	1 cut(s)	896
HindIII	AAGCTT	1 cut(s)	327
HinfI	GANTC	7 cut(s)	34, 56, 689, 858, 1343, 1436, 1461
HphI	GGTGA	6 cut(s)	43, 418, 512, 1291, 1418, 1526
Hpy166II	GTNNAC	3 cut(s)	503, 896, 1649
Hpy188I	TCNGA	4 cut(s)	688, 694, 790, 1348
Hpy8I	GTNNAC	3 cut(s)	503, 896, 1649
Hpy99I	CGWCG	3 cut(s)	1202, 1205, 1208
HpyAV	CCTTC	8 cut(s)	218, 245, 296, 653, 790, 977, 1016, 1599
HpyCH4III	ACNGT	3 cut(s)	603, 1332, 1445
HpyCH4IV	ACGT	1 cut(s)	1790
HpyCH4V	TGCA	9 cut(s)	73, 124, 430, 482, 668, 683, 1568, 1700, 1718
HpyF10VI	GCNNNNNNNGC	9 cut(s)	124, 335, 517, 853, 1032, 1142, 1577, 1706, 1715
HpyF3I	CTNAG	9 cut(s)	84, 813, 1137, 1146, 1257, 1302, 1407, 1431, 1469
HpySE526I	ACGT	1 cut(s)	1790
Hsp92II	CATG	5 cut(s)	343, 379, 417, 469, 1558
KflI	GGGWCCC	1 cut(s)	265
Kzo9I	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
LguI	GCTCTTC	2 cut(s)	939, 1378
LmnI	GCTCC	1 cut(s)	1585
Lsp1109I	GCAGC	6 cut(s)	136, 680, 754, 1044, 1580, 1712
LweI	GCATC	3 cut(s)	670, 692, 1687
MaeI	CTAG	6 cut(s)	323, 542, 771, 806, 837, 1076
MaeII	ACGT	1 cut(s)	1790
MaeIII	GTNAC	3 cut(s)	87, 1081, 1424
MalI	GATC	8 cut(s)	546, 728, 819, 971, 1038, 1607, 1683, 1739
MboI	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	3 cut(s)	544, 817, 1605
MhlI	GDGCHC	2 cut(s)	211, 413
MlsI	TGGCCA	1 cut(s)	470
MluCI	AATT	8 cut(s)	25, 215, 360, 1049, 1521, 1539, 1662, 1770
MluNI	TGGCCA	1 cut(s)	470
MlyI	GAGTC	1 cut(s)	867
Mox20I	TGGCCA	1 cut(s)	470
Mph1103I	ATGCAT	1 cut(s)	685
MroXI	GAANNNNTTC	1 cut(s)	1387
MscI	TGGCCA	1 cut(s)	470
MseI	TTAA	4 cut(s)	719, 755, 1337, 1376
MslI	CAYNNNNRTG	1 cut(s)	204
Msp20I	TGGCCA	1 cut(s)	470
MspA1I	CMGCKG	1 cut(s)	1406
MspR9I	CCNGG	2 cut(s)	404, 472
MunI	CAATTG	1 cut(s)	1539
MvaI	CCWGG	2 cut(s)	404, 472
MvnI	CGCG	1 cut(s)	370
MwoI	GCNNNNNNNGC	9 cut(s)	124, 335, 517, 853, 1032, 1142, 1577, 1706, 1715
NcoI	CCATGG	1 cut(s)	339
NdeII	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
NlaIII	CATG	5 cut(s)	343, 379, 417, 469, 1558
NlaIV	GGNNCC	6 cut(s)	266, 267, 519, 738, 909, 1581
NmuCI	GTSAC	2 cut(s)	1081, 1424
NsiI	ATGCAT	1 cut(s)	685
PciSI	GCTCTTC	2 cut(s)	939, 1378
PcsI	WCGNNNNNNNCGW	3 cut(s)	202, 1197, 1203
PdmI	GAANNNNTTC	1 cut(s)	1387
PfeI	GAWTC	6 cut(s)	34, 56, 689, 1343, 1436, 1461
PflMI	CCANNNNNTGG	1 cut(s)	830
PkrI	GCNGC	6 cut(s)	126, 670, 769, 1034, 1570, 1702
PleI	GAGTC	1 cut(s)	866
PpsI	GAGTC	1 cut(s)	866
PpuMI	RGGWCCY	2 cut(s)	265, 737
Psp124BI	GAGCTC	1 cut(s)	413
Psp5II	RGGWCCY	2 cut(s)	265, 737
Psp6I	CCWGG	2 cut(s)	402, 470
PspGI	CCWGG	2 cut(s)	402, 470
PspN4I	GGNNCC	6 cut(s)	266, 267, 519, 738, 909, 1581
PspPI	GGNCC	4 cut(s)	265, 343, 737, 1478
PspPPI	RGGWCCY	2 cut(s)	265, 737
PstNI	CAGNNNCTG	1 cut(s)	820
PsuI	RGATCY	3 cut(s)	544, 817, 1605
PvuII	CAGCTG	1 cut(s)	1406
RsaI	GTAC	3 cut(s)	476, 1329, 1360
RsaNI	GTAC	3 cut(s)	475, 1328, 1359
RseI	CAYNNNNRTG	1 cut(s)	204
SacI	GAGCTC	1 cut(s)	413
SalI	GTCGAC	1 cut(s)	894
SapI	GCTCTTC	2 cut(s)	939, 1378
SaqAI	TTAA	4 cut(s)	719, 755, 1337, 1376
SatI	GCNGC	6 cut(s)	125, 669, 768, 1033, 1569, 1701
Sau3AI	GATC	8 cut(s)	544, 726, 817, 969, 1036, 1605, 1681, 1737
Sau96I	GGNCC	4 cut(s)	265, 343, 737, 1478
SchI	GAGTC	1 cut(s)	867
ScrFI	CCNGG	2 cut(s)	404, 472
SduI	GDGCHC	2 cut(s)	211, 413
SfaNI	GCATC	3 cut(s)	670, 692, 1687
SinI	GGWCC	3 cut(s)	265, 737, 1478
SmiMI	CAYNNNNRTG	1 cut(s)	204
SmlI	CTYRAG	3 cut(s)	608, 640, 964
SmoI	CTYRAG	3 cut(s)	608, 640, 964
Sse9I	AATT	8 cut(s)	25, 215, 360, 1049, 1521, 1539, 1662, 1770
SsiI	CCGC	1 cut(s)	368
SspMI	CTAG	6 cut(s)	323, 542, 771, 806, 837, 1076
SstI	GAGCTC	1 cut(s)	413
StyD4I	CCNGG	2 cut(s)	402, 470
StyI	CCWWGG	4 cut(s)	339, 1015, 1510, 1758
TaaI	ACNGT	3 cut(s)	603, 1332, 1445
TaiI	ACGT	1 cut(s)	1793
TaqI	TCGA	6 cut(s)	286, 298, 397, 523, 895, 1393
TasI	AATT	8 cut(s)	25, 215, 360, 1049, 1521, 1539, 1662, 1770
TatI	WGTACW	2 cut(s)	1327, 1358
TfiI	GAWTC	6 cut(s)	34, 56, 689, 1343, 1436, 1461
Tru1I	TTAA	4 cut(s)	719, 755, 1337, 1376
Tru9I	TTAA	4 cut(s)	719, 755, 1337, 1376
TscAI	CASTG	1 cut(s)	1738
TseFI	GTSAC	2 cut(s)	1081, 1424
TseI	GCWGC	6 cut(s)	124, 668, 767, 1032, 1568, 1700
Tsp45I	GTSAC	2 cut(s)	1081, 1424
TspDTI	ATGAA	7 cut(s)	17, 264, 672, 957, 969, 1311, 1674
TspRI	CASTG	1 cut(s)	1738
Van91I	CCANNNNNTGG	1 cut(s)	830
VpaK11BI	GGWCC	3 cut(s)	265, 737, 1478
XagI	CCTNNNNNAGG	2 cut(s)	525, 1762
XapI	RAATTY	1 cut(s)	215
XbaI	TCTAGA	1 cut(s)	1075
XmiI	GTMKAC	1 cut(s)	895
XmnI	GAANNNNTTC	1 cut(s)	1387
XspI	CTAG	6 cut(s)	323, 542, 771, 806, 837, 1076
Zsp2I	ATGCAT	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.