Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009319

Physical Location & Seq

Genomic Coordinates Reverse (-)

933464 .. 940095

Gene Structure 6632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G001150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGTCCACTCTCTTCCTCTCCCTCCCTACTTTCCCCTCCAAATTCCACCACCCAAACGACGCCGTTTCCGCTTCCGTAACTCTCCGCGCCTCCGCCGCCGTCTCCGCCCCCGAGAAGCGCACCCGACGCAAGAAGCGGCAGCCGAAGCGCGGCGACGATGACTCCTCCCCGTCCTCCTCGCCCTTATCCTCCTCCTCCGCCGCCGAGAAGAGCCTCCGCTTCACCTTCATGGAGGAGCTCATGTCCCGGGCCCGCAACCGCGACGCCGTCGGCGTCTCCGACGTCATCTACGACATGGTCGCCGCCGGCCTCACCCCCGGCCCTCGCTCCTTCCACGGATTGGTCGTCGCTCACGCCATGAACGGCGACGCCGAGTCCGCGATGCAAACGTTGAGAAGGGAGCTCAGTTCGGGGCTTCGTCCTCTCCACGAAACGTTTATCGCCTTGATTAGGTTGTTTGGCTCAAAAGGTCGAGCTACGAGGGGACTGGAAATCCTTGCAGCCATGGAGAAATTAAATTACGACATTCGCCAAGCTTGGATGCTTCTCGTTGAGGAGCTTGTTCGGACACGCTATTTGGAAGATGCCAACAGGGTGTTCTTGAAGGGTGCCAAAGGTGGGCTGAGAGCTACGGATGAGGTGTATGATCTTCTTATAGTGGAGGACTGTAAAGTCGGGGATCATTCTAATGCATTGGAAATTTCTTATGAGATGGAGGCAGCTGGGCGGATGGCAACAACTTTTCATTTCAATTGCCTTCTTAGTGTGCAGGCTACTTGTGGAATTCCTGAAATAGCTTTTGCTACGTTTGAGAACATGCAGTATGGAGAAGAATACATGAAACCTGATACAGAGACATATAATTGGGTGATTCAAGCATATACCAGAGCTGAATCTTATGATAGAGTGCAAGATGTTGCTGAGTTACTTGGCCTGATGGTTGAAGACCACAAGCGTTTGCAGCCTAATGTGAAAACCTATGCGTTGCTGATTGAGTGCTTTACCAAGTATTGTGTGGTGCGAGAAGCAATACGGCATTTTCGTGCTCTCAAATTTTTTGAAGGAGGGACAAAAGTTTTACATAATGAAGGAAACTTTGGGGACCCCTTATCTTTGTATCTTCGAGCTTTATGTCGAGAAGGAAGAGTGGTTGAGTTGCTAGAAGCTTTAGAAGCCATGGCCCAAGACAACCAGCCAATTCCACCGCGAGCCATGATATTGAGCAGAAAGTATCGAACCCTGGTGAGCTCATGGATTGAACCTTTGCAAGAGGAAGCTGAACTTGGATATGAGATTGATTACATGGCCAGGTACATTGCAGAGGGAGGGCTTACTGGTGAACGCAAGCGATGGGTGCCTCGAAGAGGGAAAACTCCACTAGATCCTGACGCTGATGGTTTTATATATTCTAACCCTATGGAAACCTCATTCAAACAACGGTGTCTTGAGGATTGGAAGACACACAACAGAAAGCTCTTGAGAACTTTACAGAATGAAGGACTTGCAGCTTTAGGGGATGCATCTGAATCAGATTATATTAGAGTAGAGAATAGGTTAAGGAAGATCATAAAGGGTCCTGACCAGAGTGTTTTAAAGCCCAAAGCTGCTAGTAAGATGGTAGTATCTGAACTGAAGGAAGAACTAGAAGCTCAGGATCTGCCAACTGATGGAACTAGAAATGTGCTTTACCAGCGAGTCCAAAAAGCAAGGAGAATAAATCGCTCTCGTGGTCGACCCCTCTGGGTTCCTCCTGTGGAGGAGGAGGAAGAAGAGGTTGATGAAGAGCTGGATGAACTAATCTCAAGGATCAAGCTGGAAGAAGGGAATACAGAGTTCTGGAAACGCCGTTTCCTTGGAGAAGGCTTCAGCAGCGATCAGGAAAAGCAATTAGATAGTCTTGGAGAAGGCTTCAGCAGCGATCAGGAAAAGCAATTAGATAGTGGCAAATTTGAACCTCTAGATGTCACAGATAGTGTCAATGTTGTAGATGTGGCGAAAGAGGTTGACGATGATGAGGCTGAGGAAGCTGACGATGAGGATGAGGATGACAATAATGATAATGATGACGATGACGACGATGAAGAGGAGGAGGAGGAAGTAGAGGTGGGGGTAGAAGTAGAACAAGCTGAGAGACAAGATGTAGAAAGGGTGAAGCAAAAGGAAAATGAAGCTAAGAAGCCTCTTCAAATGATTGGAGTACAATTGTTAAAAGATTCTGACCAGACGAGTACATCTAAAAAGTCAAGGAGAAGAGCTTCTCGAAGAATATCAGCTGAGGATGATGCTGATGATGACTGGTTTCCTGAGGATATCTTTGAGGCATTTAAGGAGCTGAGGAAAAGGAGTATCTTTGATGAATCTGACATGTATACAATCGCTGATGCTTGGGGTTGGACATGGGAGAGAGAATACAAGAATAGACCTCCAAGAAGATGGTCACAAGAATGGGAAGTTGAGTTGGCAATTAAAGTTATGCTCAAGGTTATGGAATTGGGGGGAACACCCACAATTGGGGATTGTGCCATGATTTTGCGTGCAGCCATAAAGGCTCCTCTCCCTTCAGCTTTCTTGAAGATCTTACAGACTACACATAGTCTTGGCTATGTATTTGGCAGTCCACTCTATGATGAAATTATCTCGCTATGCCTTGATCTTGGAGAGCTGGATGCAGCCGTTGCCATTGTTGCAGACTTGGAGACCACTGGGATCAAAGTCCCAGACGAGACCTTGGACAGGGTAATTTCTGCTAAACAGACATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SAP

Protein Analysis

920

Amino Acids

104.44

Weight (kDa)

4.85

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAP	PF02037	537 - 570	3.4e-08	SAP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04260
fragaria_vesca	FvH4_6g01350 FvH4_6g01350 FvH4_6g01350 FvH4_6g01352
malus_domestica	MD04G1234900.v1.1
prunus_persica	Prupe.6G354700_v2.0.a1 Prupe.6G354700_v2.0.a1
pyrus_communis	pycom04g20830 pycom04g20860
rosa_chinensis	RchiOBHm_Chr3g0448921
rosa_laevigata	RLG00000025866
rosa_multiflora	Rmu_sc0003116.1_g000017
rosa_roxburghii	Rroxscaffold_6G00427100
rosa_rugosa	Rorug02G0617100
rosa_samantha	Rh3AG015500 Rh3BG015500 Rh3BG015600 Rh3CG014400 Rh3CG014600 Rh3DG015900
rosa_wichuraiana	Rw3G001150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
AatII	GACGTC	1 cut(s)	285
AccB1I	GGYRCC	2 cut(s)	608, 1354
AccB7I	CCANNNNNTGG	2 cut(s)	340, 1667
AccI	GTMKAC	2 cut(s)	1732, 2369
AccII	CGCG	5 cut(s)	87, 150, 261, 380, 1207
AclI	AACGTT	2 cut(s)	389, 434
AclWI	GGATC	5 cut(s)	687, 1376, 1662, 1814, 2714
AcoI	YGGCCR	1 cut(s)	1305
AcsI	RAATTY	5 cut(s)	41, 699, 783, 1052, 1946
AcuI	CTGAAG	4 cut(s)	1652, 1849, 1894, 2544
AcyI	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
AfaI	GTAC	3 cut(s)	1313, 2199, 2230
AfiI	CCNNNNNNNGG	9 cut(s)	149, 340, 450, 618, 1364, 1667, 2510, 2511, 2733
AflIII	ACRYGT	1 cut(s)	2364
AhdI	GACNNNNNGTC	1 cut(s)	373
AjnI	CCWGG	2 cut(s)	1239, 1307
AjuI	GAANNNNNNNTTGG	6 cut(s)	581, 613, 1080, 1112, 1266, 1298
Alw21I	GWGCWC	4 cut(s)	240, 405, 1048, 1250
Alw26I	GTCTC	6 cut(s)	106, 280, 848, 2125, 2690, 2717
AlwI	GGATC	5 cut(s)	687, 1376, 1662, 1814, 2714
AlwNI	CAGNNNCTG	1 cut(s)	1657
Ama87I	CYCGRG	2 cut(s)	110, 246
AoxI	GGCC	6 cut(s)	249, 307, 319, 931, 1179, 1305
ApaI	GGGCCC	1 cut(s)	253
ApoI	RAATTY	5 cut(s)	41, 699, 783, 1052, 1946
ArsI	GACNNNNNNTTYG	2 cut(s)	559, 591
Asp700I	GAANNNNTTC	1 cut(s)	2254
AspLEI	GCGC	3 cut(s)	89, 120, 150
AspS9I	GGNCC	6 cut(s)	249, 250, 320, 1102, 1180, 1574
AsuC2I	CCSGG	3 cut(s)	247, 248, 318
AsuHPI	GGTGA	6 cut(s)	214, 304, 880, 1255, 1349, 2161
AvaI	CYCGRG	2 cut(s)	110, 246
AvaII	GGWCC	2 cut(s)	1102, 1574
AxyI	CCTNAGG	1 cut(s)	2304
BaeGI	GKGCMC	1 cut(s)	253
BalI	TGGCCA	1 cut(s)	1307
BanI	GGYRCC	2 cut(s)	608, 1354
BanII	GRGCYC	4 cut(s)	240, 253, 405, 1250
BauI	CACGAG	1 cut(s)	1725
BbsI	GAAGAC	2 cut(s)	951, 1463
Bbv12I	GWGCWC	4 cut(s)	240, 405, 1048, 1250
BbvCI	CCTCAGC	3 cut(s)	2019, 2274, 2333
BccI	CCATC	8 cut(s)	706, 724, 931, 1344, 1388, 1609, 1661, 2427
BceAI	ACGGC	7 cut(s)	47, 83, 251, 379, 1049, 1830, 2657
BciT130I	CCWGG	2 cut(s)	1241, 1309
BcnI	CCSGG	3 cut(s)	247, 248, 318
BcoDI	GTCTC	6 cut(s)	106, 280, 848, 2125, 2690, 2717
BfaI	CTAG	6 cut(s)	1160, 1379, 1608, 1643, 1674, 1958
BglI	GCCNNNNNGGC	1 cut(s)	2546
BglII	AGATCT	1 cut(s)	2574
Bme1390I	CCNGG	5 cut(s)	247, 248, 318, 1241, 1309
Bme18I	GGWCC	2 cut(s)	1102, 1574
BmeRI	GACNNNNNGTC	1 cut(s)	373
BmeT110I	CYCGRG	2 cut(s)	110, 246
BmgT120I	GGNCC	6 cut(s)	249, 250, 320, 1102, 1180, 1574
BmiI	GGNNCC	8 cut(s)	251, 610, 1103, 1104, 1356, 1575, 1746, 2550
BmrFI	CCNGG	5 cut(s)	247, 248, 318, 1241, 1309
BmrI	ACTGGG	1 cut(s)	2712
BmsI	GCATC	8 cut(s)	372, 531, 574, 1507, 1529, 2272, 2371, 2656
BmuI	ACTGGG	1 cut(s)	2712
BpiI	GAAGAC	2 cut(s)	951, 1463
Bpu10I	CCTNAGC	4 cut(s)	1650, 2019, 2274, 2333
BpuEI	CTTGAG	4 cut(s)	1466, 1498, 1786, 2462
BpuMI	CCSGG	3 cut(s)	247, 248, 318
BsaHI	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
BsaI	GGTCTC	2 cut(s)	2690, 2717
BsaJI	CCNNGG	8 cut(s)	246, 316, 334, 504, 1176, 1239, 1852, 2727
BsaXI	ACNNNNNCTCC	4 cut(s)	146, 176, 227, 257
Bsc4I	CCNNNNNNNGG	9 cut(s)	149, 340, 450, 618, 1364, 1667, 2510, 2511, 2733
Bse118I	RCCGGY	1 cut(s)	305
Bse1I	ACTGG	4 cut(s)	492, 1339, 2300, 2707
Bse21I	CCTNAGG	1 cut(s)	2304
Bse3DI	GCAATG	1 cut(s)	1314
BseBI	CCWGG	2 cut(s)	1241, 1309
BseDI	CCNNGG	8 cut(s)	246, 316, 334, 504, 1176, 1239, 1852, 2727
BseGI	GGATG	9 cut(s)	546, 640, 735, 1522, 1795, 2044, 2050, 2284, 2671
BseLI	CCNNNNNNNGG	9 cut(s)	149, 340, 450, 618, 1364, 1667, 2510, 2511, 2733
BseMI	GCAATG	1 cut(s)	1314
BseMII	CTCAG	9 cut(s)	418, 614, 912, 1664, 2010, 2118, 2265, 2295, 2324
BseNI	ACTGG	4 cut(s)	492, 1339, 2300, 2707
BseSI	GKGCMC	1 cut(s)	253
BseYI	CCCAGC	1 cut(s)	722
BsgI	GTGCAG	2 cut(s)	788, 2556
Bsh1236I	CGCG	5 cut(s)	87, 150, 261, 380, 1207
BshFI	GGCC	6 cut(s)	251, 309, 321, 933, 1181, 1307
BshNI	GGYRCC	2 cut(s)	608, 1354
BsiHKAI	GWGCWC	4 cut(s)	240, 405, 1048, 1250
BsiHKCI	CYCGRG	2 cut(s)	110, 246
BsiSI	CCGG	3 cut(s)	247, 306, 318
BslFI	GGGAC	5 cut(s)	229, 498, 1081, 1115, 2699
BslI	CCNNNNNNNGG	9 cut(s)	149, 340, 450, 618, 1364, 1667, 2510, 2511, 2733
BsmAI	GTCTC	6 cut(s)	106, 280, 848, 2125, 2690, 2717
BsmBI	CGTCTC	2 cut(s)	106, 280
BsmFI	GGGAC	5 cut(s)	229, 498, 1081, 1115, 2699
BsnI	GGCC	6 cut(s)	251, 309, 321, 933, 1181, 1307
Bso31I	GGTCTC	2 cut(s)	2690, 2717
BsoBI	CYCGRG	2 cut(s)	110, 246
Bsp120I	GGGCCC	1 cut(s)	249
Bsp1286I	GDGCHC	5 cut(s)	240, 253, 405, 1048, 1250
Bsp19I	CCATGG	2 cut(s)	504, 1176
BspANI	GGCC	6 cut(s)	251, 309, 321, 933, 1181, 1307
BspCNI	CTCAG	9 cut(s)	417, 615, 913, 1663, 2011, 2119, 2266, 2296, 2325
BspFNI	CGCG	5 cut(s)	87, 150, 261, 380, 1207
BspLI	GGNNCC	8 cut(s)	251, 610, 1103, 1104, 1356, 1575, 1746, 2550
BspPI	GGATC	5 cut(s)	687, 1376, 1662, 1814, 2714
BspQI	GCTCTTC	3 cut(s)	203, 1776, 2245
BspT107I	GGYRCC	2 cut(s)	608, 1354
BspTNI	GGTCTC	2 cut(s)	2690, 2717
BsrDI	GCAATG	1 cut(s)	1314
BsrFI	RCCGGY	1 cut(s)	305
BsrI	ACTGG	4 cut(s)	492, 1339, 2300, 2707
BssAI	RCCGGY	1 cut(s)	305
BssECI	CCNNGG	8 cut(s)	246, 316, 334, 504, 1176, 1239, 1852, 2727
BssNAI	GTATAC	1 cut(s)	2370
BssNI	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
BssSI	CACGAG	1 cut(s)	1725
BssT1I	CCWWGG	4 cut(s)	504, 1176, 1852, 2727
Bst1107I	GTATAC	1 cut(s)	2370
Bst2BI	CACGAG	1 cut(s)	1725
Bst2UI	CCWGG	2 cut(s)	1241, 1309
Bst4CI	ACNGT	2 cut(s)	668, 1440
Bst6I	CTCTTC	9 cut(s)	17, 203, 1138, 1357, 1764, 1776, 2076, 2187, 2245
BstACI	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
BstAPI	GCANNNNNTGC	1 cut(s)	2675
BstC8I	GCNNGC	6 cut(s)	253, 307, 771, 1209, 1346, 2535
BstDSI	CCRYGG	3 cut(s)	334, 504, 1176
BstENI	CCTNNNNNAGG	3 cut(s)	448, 1362, 2731
BstF5I	GGATG	9 cut(s)	546, 640, 735, 1522, 1795, 2044, 2050, 2284, 2671
BstFNI	CGCG	5 cut(s)	87, 150, 261, 380, 1207
BstHHI	GCGC	3 cut(s)	89, 120, 150
BstMAI	GTCTC	6 cut(s)	106, 280, 848, 2125, 2690, 2717
BstNI	CCWGG	2 cut(s)	1241, 1309
BstNSI	RCATGY	2 cut(s)	820, 2368
BstSCI	CCNGG	5 cut(s)	245, 246, 316, 1239, 1307
BstSLI	GKGCMC	1 cut(s)	253
BstUI	CGCG	5 cut(s)	87, 150, 261, 380, 1207
BstV2I	GAAGAC	2 cut(s)	951, 1463
BstX2I	RGATCY	3 cut(s)	1381, 1654, 2574
BstXI	CCANNNNNNTGG	1 cut(s)	2433
BstYI	RGATCY	3 cut(s)	1381, 1654, 2574
BstZ17I	GTATAC	1 cut(s)	2370
Bsu36I	CCTNAGG	1 cut(s)	2304
BsuRI	GGCC	6 cut(s)	251, 309, 321, 933, 1181, 1307
BtgI	CCRYGG	3 cut(s)	334, 504, 1176
BtgZI	GCGATG	2 cut(s)	395, 1363
BtsCI	GGATG	9 cut(s)	546, 640, 735, 1522, 1795, 2044, 2050, 2284, 2671
BtsIMutI	CAGTG	1 cut(s)	2700
Cac8I	GCNNGC	6 cut(s)	253, 307, 771, 1209, 1346, 2535
CaiI	CAGNNNCTG	1 cut(s)	1657
CfoI	GCGC	3 cut(s)	89, 120, 150
Cfr10I	RCCGGY	1 cut(s)	305
Cfr13I	GGNCC	6 cut(s)	249, 250, 320, 1102, 1180, 1574
Cfr9I	CCCGGG	1 cut(s)	246
CseI	GACGC	6 cut(s)	68, 135, 262, 272, 377, 1397
Csp6I	GTAC	3 cut(s)	1312, 2198, 2229
CviQI	GTAC	3 cut(s)	1312, 2198, 2229
DraI	TTTAAA	1 cut(s)	1593
DrdI	GACNNNNNNGTC	1 cut(s)	671
DriI	GACNNNNNGTC	1 cut(s)	373
DseDI	GACNNNNNNGTC	1 cut(s)	671
EaeI	YGGCCR	1 cut(s)	1305
Eam1104I	CTCTTC	9 cut(s)	17, 203, 1138, 1357, 1764, 1776, 2076, 2187, 2245
Eam1105I	GACNNNNNGTC	1 cut(s)	373
EarI	CTCTTC	9 cut(s)	17, 203, 1138, 1357, 1764, 1776, 2076, 2187, 2245
EciI	GGCGGA	4 cut(s)	82, 94, 187, 742
Ecl136II	GAGCTC	3 cut(s)	238, 403, 1248
Eco130I	CCWWGG	4 cut(s)	504, 1176, 1852, 2727
Eco24I	GRGCYC	4 cut(s)	240, 253, 405, 1250
Eco31I	GGTCTC	2 cut(s)	2690, 2717
Eco32I	GATATC	1 cut(s)	2311
Eco47I	GGWCC	2 cut(s)	1102, 1574
Eco53kI	GAGCTC	3 cut(s)	238, 403, 1248
Eco57I	CTGAAG	4 cut(s)	1652, 1849, 1894, 2544
Eco81I	CCTNAGG	1 cut(s)	2304
Eco88I	CYCGRG	2 cut(s)	110, 246
EcoICRI	GAGCTC	3 cut(s)	238, 403, 1248
EcoNI	CCTNNNNNAGG	3 cut(s)	448, 1362, 2731
EcoO109I	RGGNCCY	2 cut(s)	1102, 1574
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	2 cut(s)	1239, 1307
EcoRV	GATATC	1 cut(s)	2311
EcoT14I	CCWWGG	4 cut(s)	504, 1176, 1852, 2727
EcoT22I	ATGCAT	2 cut(s)	694, 1522
EcoT38I	GRGCYC	4 cut(s)	240, 253, 405, 1250
ErhI	CCWWGG	4 cut(s)	504, 1176, 1852, 2727
Esp3I	CGTCTC	2 cut(s)	106, 280
FalI	AAGNNNNNCTT	2 cut(s)	1266, 1298
FaqI	GGGAC	5 cut(s)	229, 498, 1081, 1115, 2699
FauI	CCCGC	1 cut(s)	260
FblI	GTMKAC	2 cut(s)	1732, 2369
FokI	GGATG	9 cut(s)	553, 647, 742, 1529, 1802, 2051, 2057, 2291, 2678
FriOI	GRGCYC	4 cut(s)	240, 253, 405, 1250
FspBI	CTAG	6 cut(s)	1160, 1379, 1608, 1643, 1674, 1958
GlaI	GCGC	3 cut(s)	88, 119, 149
GsaI	CCCAGC	1 cut(s)	726
HaeIII	GGCC	6 cut(s)	251, 309, 321, 933, 1181, 1307
HapII	CCGG	3 cut(s)	247, 306, 318
HgaI	GACGC	6 cut(s)	68, 135, 262, 272, 377, 1397
HhaI	GCGC	3 cut(s)	89, 120, 150
Hin1I	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
Hin6I	GCGC	3 cut(s)	87, 118, 148
HinP1I	GCGC	3 cut(s)	87, 118, 148
HincII	GTYRAC	2 cut(s)	1733, 2005
HindII	GTYRAC	2 cut(s)	1733, 2005
HindIII	AAGCTT	2 cut(s)	534, 1164
HinfI	GANTC	8 cut(s)	161, 374, 871, 893, 1526, 1695, 2213, 2357
HpaII	CCGG	3 cut(s)	247, 306, 318
HphI	GGTGA	6 cut(s)	214, 304, 880, 1255, 1349, 2161
Hpy166II	GTNNAC	6 cut(s)	6, 1340, 1733, 2005, 2370, 2618
Hpy188I	TCNGA	7 cut(s)	280, 567, 1525, 1531, 1627, 2218, 2362
Hpy8I	GTNNAC	6 cut(s)	6, 1340, 1733, 2005, 2370, 2618
Hpy99I	CGWCG	9 cut(s)	62, 129, 158, 266, 272, 284, 350, 371, 2078
HpyCH4III	ACNGT	2 cut(s)	668, 1440
HpyCH4IV	ACGT	4 cut(s)	282, 389, 434, 806
HpySE526I	ACGT	4 cut(s)	282, 389, 434, 806
Hsp92I	GRCGYC	5 cut(s)	60, 264, 273, 282, 369
HspAI	GCGC	3 cut(s)	87, 118, 148
KflI	GGGWCCC	1 cut(s)	1102
KroI	GCCGGC	1 cut(s)	305
KroNI	GCCGGC	1 cut(s)	307
LguI	GCTCTTC	3 cut(s)	203, 1776, 2245
LmnI	GCTCC	6 cut(s)	235, 332, 400, 556, 2329, 2554
LweI	GCATC	8 cut(s)	372, 531, 574, 1507, 1529, 2272, 2371, 2656
MaeI	CTAG	6 cut(s)	1160, 1379, 1608, 1643, 1674, 1958
MaeII	ACGT	4 cut(s)	282, 389, 434, 806
MaeIII	GTNAC	4 cut(s)	76, 924, 1963, 2436
MfeI	CAATTG	3 cut(s)	751, 2201, 2508
MflI	RGATCY	3 cut(s)	1381, 1654, 2574
MhlI	GDGCHC	5 cut(s)	240, 253, 405, 1048, 1250
MlsI	TGGCCA	1 cut(s)	1307
MluNI	TGGCCA	1 cut(s)	1307
MlyI	GAGTC	3 cut(s)	155, 383, 1704
MmeI	TCCRAC	2 cut(s)	303, 2372
Mox20I	TGGCCA	1 cut(s)	1307
Mph1103I	ATGCAT	2 cut(s)	694, 1522
MroNI	GCCGGC	1 cut(s)	305
MroXI	GAANNNNTTC	1 cut(s)	2254
MscI	TGGCCA	1 cut(s)	1307
MseI	TTAA	6 cut(s)	515, 1556, 1592, 2207, 2325, 2466
MslI	CAYNNNNRTG	4 cut(s)	227, 687, 1041, 2443
Msp20I	TGGCCA	1 cut(s)	1307
MspA1I	CMGCKG	2 cut(s)	722, 2273
MspI	CCGG	3 cut(s)	247, 306, 318
MspR9I	CCNGG	5 cut(s)	247, 248, 318, 1241, 1309
MunI	CAATTG	3 cut(s)	751, 2201, 2508
MvaI	CCWGG	2 cut(s)	1241, 1309
MvnI	CGCG	5 cut(s)	87, 150, 261, 380, 1207
NaeI	GCCGGC	1 cut(s)	307
NciI	CCSGG	3 cut(s)	247, 248, 318
NcoI	CCATGG	2 cut(s)	504, 1176
NgoMIV	GCCGGC	1 cut(s)	305
NlaIV	GGNNCC	8 cut(s)	251, 610, 1103, 1104, 1356, 1575, 1746, 2550
NmeAIII	GCCGAG	2 cut(s)	229, 397
NmuCI	GTSAC	2 cut(s)	1963, 2436
NsiI	ATGCAT	2 cut(s)	694, 1522
NspI	RCATGY	2 cut(s)	820, 2368
PciI	ACATGT	1 cut(s)	2364
PciSI	GCTCTTC	3 cut(s)	203, 1776, 2245
PcsI	WCGNNNNNNNCGW	7 cut(s)	270, 276, 288, 342, 369, 1039, 2073
PdiI	GCCGGC	1 cut(s)	307
PdmI	GAANNNNTTC	1 cut(s)	2254
PfeI	GAWTC	5 cut(s)	871, 893, 1526, 2213, 2357
PflFI	GACNNNGTC	2 cut(s)	266, 296
PflMI	CCANNNNNTGG	2 cut(s)	340, 1667
PleI	GAGTC	3 cut(s)	155, 382, 1703
PpsI	GAGTC	3 cut(s)	155, 382, 1703
PpuMI	RGGWCCY	2 cut(s)	1102, 1574
PscI	ACATGT	1 cut(s)	2364
Psp124BI	GAGCTC	3 cut(s)	240, 405, 1250
Psp1406I	AACGTT	2 cut(s)	389, 434
Psp5II	RGGWCCY	2 cut(s)	1102, 1574
Psp6I	CCWGG	2 cut(s)	1239, 1307
PspFI	CCCAGC	1 cut(s)	722
PspGI	CCWGG	2 cut(s)	1239, 1307
PspN4I	GGNNCC	8 cut(s)	251, 610, 1103, 1104, 1356, 1575, 1746, 2550
PspOMI	GGGCCC	1 cut(s)	249
PspPI	GGNCC	6 cut(s)	249, 250, 320, 1102, 1180, 1574
PspPPI	RGGWCCY	2 cut(s)	1102, 1574
PstNI	CAGNNNCTG	1 cut(s)	1657
PsuI	RGATCY	3 cut(s)	1381, 1654, 2574
PsyI	GACNNNGTC	2 cut(s)	266, 296
PvuII	CAGCTG	2 cut(s)	722, 2273
RsaI	GTAC	3 cut(s)	1313, 2199, 2230
RsaNI	GTAC	3 cut(s)	1312, 2198, 2229
RseI	CAYNNNNRTG	4 cut(s)	227, 687, 1041, 2443
SacI	GAGCTC	3 cut(s)	240, 405, 1250
SalI	GTCGAC	1 cut(s)	1731
SapI	GCTCTTC	3 cut(s)	203, 1776, 2245
SaqAI	TTAA	6 cut(s)	515, 1556, 1592, 2207, 2325, 2466
Sau96I	GGNCC	6 cut(s)	249, 250, 320, 1102, 1180, 1574
SchI	GAGTC	3 cut(s)	155, 383, 1704
ScrFI	CCNGG	5 cut(s)	247, 248, 318, 1241, 1309
SduI	GDGCHC	5 cut(s)	240, 253, 405, 1048, 1250
SfaNI	GCATC	8 cut(s)	372, 531, 574, 1507, 1529, 2272, 2371, 2656
SinI	GGWCC	2 cut(s)	1102, 1574
SmaI	CCCGGG	1 cut(s)	248
SmiMI	CAYNNNNRTG	4 cut(s)	227, 687, 1041, 2443
SmlI	CTYRAG	4 cut(s)	1445, 1477, 1801, 2477
SmoI	CTYRAG	4 cut(s)	1445, 1477, 1801, 2477
SspMI	CTAG	6 cut(s)	1160, 1379, 1608, 1643, 1674, 1958
SstI	GAGCTC	3 cut(s)	240, 405, 1250
StyD4I	CCNGG	5 cut(s)	245, 246, 316, 1239, 1307
StyI	CCWWGG	4 cut(s)	504, 1176, 1852, 2727
TaaI	ACNGT	2 cut(s)	668, 1440
TaiI	ACGT	4 cut(s)	285, 392, 437, 809
TaqI	TCGA	7 cut(s)	472, 1123, 1135, 1234, 1360, 1732, 2260
TatI	WGTACW	2 cut(s)	2197, 2228
TauI	GCSGC	5 cut(s)	98, 139, 153, 203, 305
TfiI	GAWTC	5 cut(s)	871, 893, 1526, 2213, 2357
Tru1I	TTAA	6 cut(s)	515, 1556, 1592, 2207, 2325, 2466
Tru9I	TTAA	6 cut(s)	515, 1556, 1592, 2207, 2325, 2466
TscAI	CASTG	1 cut(s)	2707
TseFI	GTSAC	2 cut(s)	1963, 2436
Tsp45I	GTSAC	2 cut(s)	1963, 2436
TspGWI	ACGGA	3 cut(s)	64, 351, 647
TspMI	CCCGGG	1 cut(s)	246
TspRI	CASTG	1 cut(s)	2707
Tth111I	GACNNNGTC	2 cut(s)	266, 296
Van91I	CCANNNNNTGG	2 cut(s)	340, 1667
VpaK11BI	GGWCC	2 cut(s)	1102, 1574
XagI	CCTNNNNNAGG	3 cut(s)	448, 1362, 2731
XapI	RAATTY	5 cut(s)	41, 699, 783, 1052, 1946
XbaI	TCTAGA	1 cut(s)	1957
XceI	RCATGY	2 cut(s)	820, 2368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1012
XmaI	CCCGGG	1 cut(s)	246
XmiI	GTMKAC	2 cut(s)	1732, 2369
XmnI	GAANNNNTTC	1 cut(s)	2254
XspI	CTAG	6 cut(s)	1160, 1379, 1608, 1643, 1674, 1958
ZraI	GACGTC	1 cut(s)	283
Zsp2I	ATGCAT	2 cut(s)	694, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.