Rroxscaffold_7G00163000

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0010645
Physical Location & Seq
Forward (+)
5342178 .. 5352730
10553 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00163000.1

Sequence Viewer

Length: 1752 bp
ATGGAAAGCAGGTCACCATTCACTAGGAAAGGTCCAAATGGGAAGTCATATCCGGAGCTCCCTATGATGGATTCTGACATATCTTATGTTAGCTCTGGAAGGCCCAGCATTGACCGCATCTTCCCTACATTCTATGACACCTTTGATTCAGGAAAAGCCACCCCACCACGAATGTCAAACAGCACAGAAATAGACATGAACCACAGCTTTGAATCCATGAACTACTATGGAAGGAGGTCTGTGGATATCAGCAGCTCACCTCCTACATTCTCCTCAATCTCTCAGGAAAGTGATAGACTATCGTCTGCTTCGCAGCCAATGATGGAAGATGTGGAGGCTGAAATGAGGAGGCTAAAGCTCGAGCTCAAGCAAACTATGGAAATGTATAGTACTGCCTGTAAAGAGGCACTCACGGCAAAGCAAAAGGTACAAGAAGCCTTACACTCTTCATCATTTCAAGCAAGAAGTTCTTATTATAACAAGAGATATAAATATGTACAGGCAGTAGAACTCCAGCGCTGGAAATTAGAAGAAGAAAGAAGATTGGAAGAGGCACGGTTAGCTGAGGAAGCTGCAATGGCTATTGTGGAAAAGGAAAGAGCCAAGTCCAAAGCAGCCATGGAGGCAGCTGAAGCAGCTAGGAGAATCGCAGAACTGGAAGCACAGAAGAGAATCAATGCAGAAATGAAAGCAATCAGAGAAGCAGACGAGAAGAAAAAGGCAATCAGTGCTTTACAACAGTCGGATGTCAGGTATAGGAGGTATTCCATCGAGGAAATTGAGGCTGCCACAGAGTTCTTTGCAGAATCTCGCAAGATTGGTGAAGGAGGCTATGGTCCTGTATATCGGTGTAATCTAGATCATACACCTGTGGCAATTAAAGTTCTACGCCCTGATGCAGCTCAAGGAAGATCACAGTTTAACCAAGAGGTTGAAGTACTTAGCTGTATAAGGCATCCTAATATGGTTCTGCTCCTTGGGGCCTGCCCTGAGTATGGATGTTTGGTTTACGAGTATATGGCAAATGGGAGCTTGGAAGACCGCCTCCTGCGAAGAGGAAACAGTCCACCTCTCTCTTGGCAGCTTAGGTTTAGAATTGCAGCTGAAATCGGCACAGGCTTGTTGTTCCTCCACCAAGCCAAACCAGAACCACTTGTCCACCGTGACTTGAAACCTGCCAACATCTTGCTTGACAGGAACTATGTTAGCAAGATCAGCGACGTTGGCTTGGCCAGGCTGGTGCCCCCATCAGTGGCTGACAATGTGACACAGTATCGAATGACATCAACAGCCGGAACATTCTGCTACATTGATCCTGAGTACCAGCAGACAGGCATGCTCGGCGTGAAGTCTGATGTATACTCTCTTGGAATAATGTTTTTGCAAATGATCACAGCCAAGCCAGCAATGGGACTGACTCATCATGTCGAAAGGTCTATTGAGAAGGGGACTTTCGCTTCAATGCTGGATCCAGCCGTGCAAGATTGGCCTGTCGAAGAAACCATGAACTTCGCCAAGCTGGCTCTCCAATGTGCAGAGTTAAGGCGAAAAGACAGACCGGACCTTGGCAAGGTGATCCTGCCAGAACTCAACAGATTGAGAATGATTGCTGAAGAGACTATGCATCCCACACTAATGGGCGATGACGGTGGCTTTTCACCCCAGCACAGCCAAGTTTCACTGCAGCTAGAGGTATTTATAGGAATACATTTGAGATGTGAGATGCTTAAAGAACAAATACAACTTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Usp

Protein Analysis

583

Amino Acids

66.04

Weight (kDa)

6.33

Isoelectric Point (pI)

58.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 268 - 521 3.4e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 270 - 525 9.5e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010645)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24370 AT4G31230 AT4G31230
fragaria_vesca FvH4_2g36560 FvH4_2g36560
malus_domestica MD15G1105300.v1.1
prunus_persica Prupe.1G457100_v2.0.a1
pyrus_communis pycom08g10450
rosa_chinensis RchiOBHm_Chr6g0305261
rosa_laevigata RLG00000010904
rosa_multiflora Rmu_ssc0000276.1_g000006
rosa_roxburghii Rroxscaffold_7G00162990 Rroxscaffold_7G00163000
rosa_rugosa Rorug06G0339100 Rorug06G0339200
rosa_samantha Rh6AG450700 Rh6BG450700 Rh6CG464800 Rh6DG451400
rosa_wichuraiana Rw6G039280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
Acc36I ACCTGC 1 cut(s) 1183
AccB1I GGYRCC 1 cut(s) 1240
AccI GTMKAC 1 cut(s) 1359
AccIII TCCGGA 1 cut(s) 52
AciI CCGC 2 cut(s) 115, 1042
AclWI GGATC 4 cut(s) 1307, 1463, 1476, 1570
AcoI YGGCCR 1 cut(s) 1230
AcuI CTGAAG 2 cut(s) 651, 1632
AfaI GTAC 5 cut(s) 391, 429, 498, 939, 1322
AfeI AGCGCT 1 cut(s) 518
AfiI CCNNNNNNNGG 6 cut(s) 67, 995, 1252, 1409, 1565, 1570
AgsI TTSAA 5 cut(s) 212, 458, 935, 1171, 1461
AjnI CCWGG 1 cut(s) 1232
AloI GAACNNNNNNTCC 2 cut(s) 1140, 1172
Alw21I GWGCWC 2 cut(s) 60, 366
Alw26I GTCTC 1 cut(s) 1610
AlwI GGATC 4 cut(s) 1307, 1463, 1476, 1570
AlwNI CAGNNNCTG 1 cut(s) 1256
Ama87I CYCGRG 1 cut(s) 359
Aor13HI TCCGGA 1 cut(s) 52
Aor51HI AGCGCT 1 cut(s) 518
AoxI GGCC 4 cut(s) 101, 981, 1230, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 29, 61
AspLEI GCGC 1 cut(s) 519
AspS9I GGNCC 5 cut(s) 32, 102, 836, 981, 1561
AsuHPI GGTGA 5 cut(s) 6, 249, 833, 1585, 1650
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 3 cut(s) 32, 836, 1561
BaeGI GKGCMC 1 cut(s) 1245
BalI TGGCCA 1 cut(s) 1232
BamHI GGATCC 1 cut(s) 1468
BanI GGYRCC 1 cut(s) 1240
BanII GRGCYC 2 cut(s) 60, 366
BbsI GAAGAC 1 cut(s) 1044
Bbv12I GWGCWC 2 cut(s) 60, 366
BbvCI CCTCAGC 1 cut(s) 564
BccI CCATC 4 cut(s) 61, 316, 776, 1255
BceAI ACGGC 2 cut(s) 429, 1460
BciT130I CCWGG 1 cut(s) 1234
BclI TGATCA 1 cut(s) 1389
BcoDI GTCTC 1 cut(s) 1610
BfaI CTAG 4 cut(s) 24, 639, 857, 1688
BfmI CTRYAG 1 cut(s) 1682
BfoI RGCGCY 1 cut(s) 520
BfuAI ACCTGC 1 cut(s) 1183
BglI GCCNNNNNGGC 2 cut(s) 623, 1520
BmcAI AGTACT 2 cut(s) 391, 939
Bme1390I CCNGG 1 cut(s) 1234
Bme18I GGWCC 3 cut(s) 32, 836, 1561
BmeT110I CYCGRG 1 cut(s) 359
BmgT120I GGNCC 5 cut(s) 32, 102, 836, 981, 1561
BmiI GGNNCC 3 cut(s) 982, 1242, 1470
BmrFI CCNGG 1 cut(s) 1234
BmsI GCATC 5 cut(s) 126, 886, 964, 1633, 1713
BoxI GACNNNNGTC 1 cut(s) 301
BpiI GAAGAC 1 cut(s) 1044
BpmI CTGGAG 1 cut(s) 497
Bpu10I CCTNAGC 2 cut(s) 564, 1085
BpuEI CTTGAG 2 cut(s) 350, 888
BsaJI CCNNGG 3 cut(s) 618, 976, 1564
BsaWI WCCGGW 2 cut(s) 52, 1558
Bsc4I CCNNNNNNNGG 6 cut(s) 67, 995, 1252, 1409, 1565, 1570
Bse1I ACTGG 1 cut(s) 660
Bse3DI GCAATG 2 cut(s) 582, 1413
BseAI TCCGGA 1 cut(s) 52
BseBI CCWGG 1 cut(s) 1234
BseDI CCNNGG 3 cut(s) 618, 976, 1564
BseGI GGATG 4 cut(s) 751, 955, 1004, 1624
BseLI CCNNNNNNNGG 6 cut(s) 67, 995, 1252, 1409, 1565, 1570
BseMI GCAATG 2 cut(s) 582, 1413
BseMII CTCAG 4 cut(s) 296, 555, 981, 1308
BseNI ACTGG 1 cut(s) 660
BseRI GAGGAG 2 cut(s) 262, 361
BseSI GKGCMC 1 cut(s) 1245
BseYI CCCAGC 2 cut(s) 104, 1662
BsgI GTGCAG 1 cut(s) 1554
BshFI GGCC 4 cut(s) 103, 983, 1232, 1489
BshNI GGYRCC 1 cut(s) 1240
BsiHKAI GWGCWC 2 cut(s) 60, 366
BsiHKCI CYCGRG 1 cut(s) 359
BsiSI CCGG 3 cut(s) 53, 1293, 1559
BslFI GGGAC 2 cut(s) 1425, 1462
BslI CCNNNNNNNGG 6 cut(s) 67, 995, 1252, 1409, 1565, 1570
BsmAI GTCTC 1 cut(s) 1610
BsmFI GGGAC 2 cut(s) 1425, 1462
BsnI GGCC 4 cut(s) 103, 983, 1232, 1489
BsoBI CYCGRG 1 cut(s) 359
Bsp1286I GDGCHC 3 cut(s) 60, 366, 1245
Bsp13I TCCGGA 1 cut(s) 52
Bsp1407I TGTACA 1 cut(s) 496
Bsp143I GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
Bsp19I CCATGG 1 cut(s) 618
BspACI CCGC 2 cut(s) 115, 1042
BspANI GGCC 4 cut(s) 103, 983, 1232, 1489
BspCNI CTCAG 4 cut(s) 295, 556, 982, 1309
BspEI TCCGGA 1 cut(s) 52
BspLI GGNNCC 3 cut(s) 982, 1242, 1470
BspMAI CTGCAG 1 cut(s) 1686
BspMI ACCTGC 1 cut(s) 1183
BspPI GGATC 4 cut(s) 1307, 1463, 1476, 1570
BspT107I GGYRCC 1 cut(s) 1240
BsrDI GCAATG 2 cut(s) 582, 1413
BsrGI TGTACA 1 cut(s) 496
BsrI ACTGG 1 cut(s) 660
BssECI CCNNGG 3 cut(s) 618, 976, 1564
BssMI GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
BssNAI GTATAC 1 cut(s) 1360
BssT1I CCWWGG 3 cut(s) 618, 976, 1564
Bst1107I GTATAC 1 cut(s) 1360
Bst2UI CCWGG 1 cut(s) 1234
Bst4CI ACNGT 7 cut(s) 558, 741, 918, 1064, 1163, 1272, 1649
Bst6I CTCTTC 5 cut(s) 451, 543, 662, 1048, 1608
BstAPI GCANNNNNTGC 1 cut(s) 728
BstAUI TGTACA 1 cut(s) 496
BstC8I GCNNGC 4 cut(s) 985, 1337, 1404, 1521
BstDEI CTNAG 6 cut(s) 282, 564, 941, 990, 1085, 1317
BstDSI CCRYGG 1 cut(s) 618
BstEII GGTNACC 1 cut(s) 12
BstENI CCTNNNNNAGG 1 cut(s) 1568
BstF5I GGATG 4 cut(s) 751, 955, 1004, 1624
BstH2I RGCGCY 1 cut(s) 520
BstHHI GCGC 1 cut(s) 519
BstKTI GATC 7 cut(s) 862, 914, 1215, 1315, 1392, 1471, 1578
BstMAI GTCTC 1 cut(s) 1610
BstMBI GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
BstNI CCWGG 1 cut(s) 1234
BstNSI RCATGY 1 cut(s) 1339
BstPAI GACNNNNGTC 1 cut(s) 301
BstPI GGTNACC 1 cut(s) 12
BstSCI CCNGG 1 cut(s) 1232
BstSFI CTRYAG 1 cut(s) 1682
BstSLI GKGCMC 1 cut(s) 1245
BstV2I GAAGAC 1 cut(s) 1044
BstX2I RGATCY 1 cut(s) 1468
BstXI CCANNNNNNTGG 1 cut(s) 1636
BstYI RGATCY 1 cut(s) 1468
BstZ17I GTATAC 1 cut(s) 1360
BsuRI GGCC 4 cut(s) 103, 983, 1232, 1489
BtgI CCRYGG 1 cut(s) 618
BtgZI GCGATG 1 cut(s) 1656
BtsCI GGATG 4 cut(s) 751, 955, 1004, 1624
BtsI GCAGTG 1 cut(s) 1679
BtsIMutI CAGTG 3 cut(s) 733, 1257, 1679
BveI ACCTGC 1 cut(s) 1183
Cac8I GCNNGC 4 cut(s) 985, 1337, 1404, 1521
CaiI CAGNNNCTG 1 cut(s) 1256
CfoI GCGC 1 cut(s) 519
Cfr13I GGNCC 5 cut(s) 32, 102, 836, 981, 1561
Csp6I GTAC 5 cut(s) 390, 428, 497, 938, 1321
CviAII CATG 6 cut(s) 196, 217, 619, 1336, 1424, 1504
CviQI GTAC 5 cut(s) 390, 428, 497, 938, 1321
DdeI CTNAG 6 cut(s) 282, 564, 941, 990, 1085, 1317
DpnI GATC 7 cut(s) 861, 913, 1214, 1314, 1391, 1470, 1577
DpnII GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
EaeI YGGCCR 1 cut(s) 1230
Eam1104I CTCTTC 5 cut(s) 451, 543, 662, 1048, 1608
EarI CTCTTC 5 cut(s) 451, 543, 662, 1048, 1608
Ecl136II GAGCTC 2 cut(s) 58, 364
Eco130I CCWWGG 3 cut(s) 618, 976, 1564
Eco24I GRGCYC 2 cut(s) 60, 366
Eco32I GATATC 1 cut(s) 247
Eco47I GGWCC 3 cut(s) 32, 836, 1561
Eco47III AGCGCT 1 cut(s) 518
Eco53kI GAGCTC 2 cut(s) 58, 364
Eco57I CTGAAG 2 cut(s) 651, 1632
Eco88I CYCGRG 1 cut(s) 359
Eco91I GGTNACC 1 cut(s) 12
EcoICRI GAGCTC 2 cut(s) 58, 364
EcoNI CCTNNNNNAGG 1 cut(s) 1568
EcoO109I RGGNCCY 1 cut(s) 981
EcoO65I GGTNACC 1 cut(s) 12
EcoRII CCWGG 1 cut(s) 1232
EcoRV GATATC 1 cut(s) 247
EcoT14I CCWWGG 3 cut(s) 618, 976, 1564
EcoT22I ATGCAT 1 cut(s) 1626
EcoT38I GRGCYC 2 cut(s) 60, 366
ErhI CCWWGG 3 cut(s) 618, 976, 1564
FaeI CATG 6 cut(s) 199, 220, 622, 1339, 1427, 1507
FalI AAGNNNNNCTT 2 cut(s) 454, 486
FaqI GGGAC 2 cut(s) 1425, 1462
FatI CATG 6 cut(s) 195, 216, 618, 1335, 1423, 1503
FbaI TGATCA 1 cut(s) 1389
FblI GTMKAC 1 cut(s) 1359
FokI GGATG 4 cut(s) 758, 942, 1011, 1611
FriOI GRGCYC 2 cut(s) 60, 366
FspBI CTAG 4 cut(s) 24, 639, 857, 1688
GlaI GCGC 1 cut(s) 518
GsaI CCCAGC 2 cut(s) 108, 1666
GsuI CTGGAG 1 cut(s) 497
HaeII RGCGCY 1 cut(s) 520
HaeIII GGCC 4 cut(s) 103, 983, 1232, 1489
HapII CCGG 3 cut(s) 53, 1293, 1559
HhaI GCGC 1 cut(s) 519
Hin1II CATG 6 cut(s) 199, 220, 622, 1339, 1427, 1507
Hin6I GCGC 1 cut(s) 517
HinP1I GCGC 1 cut(s) 517
HinfI GANTC 7 cut(s) 71, 146, 212, 645, 672, 806, 1417
HpaII CCGG 3 cut(s) 53, 1293, 1559
HphI GGTGA 5 cut(s) 6, 249, 833, 1585, 1650
Hpy166II GTNNAC 4 cut(s) 1009, 1067, 1159, 1360
Hpy188I TCNGA 4 cut(s) 76, 698, 745, 1354
Hpy188III TCNNGA 6 cut(s) 53, 96, 150, 284, 857, 1316
Hpy8I GTNNAC 4 cut(s) 1009, 1067, 1159, 1360
Hpy99I CGWCG 1 cut(s) 1223
HpyAV CCTTC 4 cut(s) 93, 225, 818, 1438
HpyCH4III ACNGT 7 cut(s) 558, 741, 918, 1064, 1163, 1272, 1649
HpyCH4IV ACGT 1 cut(s) 1221
HpyF3I CTNAG 6 cut(s) 282, 564, 941, 990, 1085, 1317
HpySE526I ACGT 1 cut(s) 1221
Hsp92II CATG 6 cut(s) 199, 220, 622, 1339, 1427, 1507
HspAI GCGC 1 cut(s) 517
Kpn2I TCCGGA 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 1389
Kzo9I GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
LmnI GCTCC 4 cut(s) 55, 63, 978, 1029
LweI GCATC 5 cut(s) 126, 886, 964, 1633, 1713
MaeI CTAG 4 cut(s) 24, 639, 857, 1688
MaeII ACGT 1 cut(s) 1221
MaeIII GTNAC 3 cut(s) 12, 1163, 1264
MalI GATC 7 cut(s) 861, 913, 1214, 1314, 1391, 1470, 1577
MboI GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 3 cut(s) 60, 366, 1245
MlsI TGGCCA 1 cut(s) 1232
MluCI AATT 4 cut(s) 524, 777, 876, 1095
MluNI TGGCCA 1 cut(s) 1232
MlyI GAGTC 1 cut(s) 1411
MmeI TCCRAC 1 cut(s) 723
Mox20I TGGCCA 1 cut(s) 1232
Mph1103I ATGCAT 1 cut(s) 1626
MroI TCCGGA 1 cut(s) 52
MscI TGGCCA 1 cut(s) 1232
MseI TTAA 4 cut(s) 879, 921, 1541, 1728
MslI CAYNNNNRTG 1 cut(s) 1634
Msp20I TGGCCA 1 cut(s) 1232
MspA1I CMGCKG 2 cut(s) 629, 1103
MspI CCGG 3 cut(s) 53, 1293, 1559
MspR9I CCNGG 1 cut(s) 1234
MvaI CCWGG 1 cut(s) 1234
NcoI CCATGG 1 cut(s) 618
NdeII GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
NlaIII CATG 6 cut(s) 199, 220, 622, 1339, 1427, 1507
NlaIV GGNNCC 3 cut(s) 982, 1242, 1470
NmeAIII GCCGAG 1 cut(s) 1320
NmuCI GTSAC 3 cut(s) 12, 1163, 1264
NsiI ATGCAT 1 cut(s) 1626
NspI RCATGY 1 cut(s) 1339
PaeI GCATGC 1 cut(s) 1339
PaeR7I CTCGAG 1 cut(s) 359
PfeI GAWTC 6 cut(s) 71, 146, 212, 645, 672, 806
PleI GAGTC 1 cut(s) 1411
PpsI GAGTC 1 cut(s) 1411
PshAI GACNNNNGTC 1 cut(s) 301
PsiI TTATAA 1 cut(s) 477
Psp124BI GAGCTC 2 cut(s) 60, 366
Psp6I CCWGG 1 cut(s) 1232
PspEI GGTNACC 1 cut(s) 12
PspFI CCCAGC 2 cut(s) 104, 1662
PspGI CCWGG 1 cut(s) 1232
PspN4I GGNNCC 3 cut(s) 982, 1242, 1470
PspPI GGNCC 5 cut(s) 32, 102, 836, 981, 1561
PspXI VCTCGAGB 1 cut(s) 359
PstI CTGCAG 1 cut(s) 1686
PstNI CAGNNNCTG 1 cut(s) 1256
PsuI RGATCY 1 cut(s) 1468
PvuII CAGCTG 2 cut(s) 629, 1103
RsaI GTAC 5 cut(s) 391, 429, 498, 939, 1322
RsaNI GTAC 5 cut(s) 390, 428, 497, 938, 1321
RseI CAYNNNNRTG 1 cut(s) 1634
SacI GAGCTC 2 cut(s) 60, 366
SaqAI TTAA 4 cut(s) 879, 921, 1541, 1728
Sau3AI GATC 7 cut(s) 859, 911, 1212, 1312, 1389, 1468, 1575
Sau96I GGNCC 5 cut(s) 32, 102, 836, 981, 1561
ScaI AGTACT 2 cut(s) 391, 939
SchI GAGTC 1 cut(s) 1411
ScrFI CCNGG 1 cut(s) 1234
SduI GDGCHC 3 cut(s) 60, 366, 1245
SfaNI GCATC 5 cut(s) 126, 886, 964, 1633, 1713
SfcI CTRYAG 1 cut(s) 1682
Sfr274I CTCGAG 1 cut(s) 359
SinI GGWCC 3 cut(s) 32, 836, 1561
SlaI CTCGAG 1 cut(s) 359
SmiMI CAYNNNNRTG 1 cut(s) 1634
SmlI CTYRAG 3 cut(s) 359, 365, 903
SmoI CTYRAG 3 cut(s) 359, 365, 903
SphI GCATGC 1 cut(s) 1339
Sse9I AATT 4 cut(s) 524, 777, 876, 1095
SsiI CCGC 2 cut(s) 115, 1042
SspMI CTAG 4 cut(s) 24, 639, 857, 1688
SstI GAGCTC 2 cut(s) 60, 366
StyD4I CCNGG 1 cut(s) 1232
StyI CCWWGG 3 cut(s) 618, 976, 1564
TaaI ACNGT 7 cut(s) 558, 741, 918, 1064, 1163, 1272, 1649
TaiI ACGT 1 cut(s) 1224
TaqI TCGA 5 cut(s) 360, 771, 1276, 1428, 1494
TasI AATT 4 cut(s) 524, 777, 876, 1095
TatI WGTACW 3 cut(s) 389, 496, 937
TfiI GAWTC 6 cut(s) 71, 146, 212, 645, 672, 806
Tru1I TTAA 4 cut(s) 879, 921, 1541, 1728
Tru9I TTAA 4 cut(s) 879, 921, 1541, 1728
TscAI CASTG 3 cut(s) 733, 1257, 1686
TseFI GTSAC 3 cut(s) 12, 1163, 1264
Tsp45I GTSAC 3 cut(s) 12, 1163, 1264
TspDTI ATGAA 5 cut(s) 212, 233, 438, 701, 1520
TspRI CASTG 3 cut(s) 733, 1257, 1686
VpaK11BI GGWCC 3 cut(s) 32, 836, 1561
XagI CCTNNNNNAGG 1 cut(s) 1568
XbaI TCTAGA 1 cut(s) 856
XceI RCATGY 1 cut(s) 1339
XcmI CCANNNNNNNNNTGG 3 cut(s) 616, 1074, 1405
XhoI CTCGAG 1 cut(s) 359
XmiI GTMKAC 1 cut(s) 1359
XspI CTAG 4 cut(s) 24, 639, 857, 1688
ZrmI AGTACT 2 cut(s) 391, 939
Zsp2I ATGCAT 1 cut(s) 1626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.