Rh6DG451400

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0010645
Physical Location & Seq
Reverse (-)
62372258 .. 62376367
4110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG451400.1

Sequence Viewer

Length: 1878 bp
ATGAAATTGGCTCCAGATTTTTGTAATGTATATATCATATCGAAAGGAAAACCTCATTCCTCGAGAGCTGCCACGCGTCCAGCTCCAGCCATCTCACCTTTACGGAACCAAGTTCGTAACCAAATCAACACCACAAAATCAGAGCCATATGTCTACCCTCCTAATAATATGAAAGCACCGGAAAAGCCACCGGAAAAACTACACCATTCACATGATGAATCAGACTTATTCAGGTCACCATTCACTAGGAAAGGTCCAAATGGGAAGTCATATCCGGAGCTCCCTATGATGGATTCTGACATATCTTATGTTAGCTCTGGAAGGCCCAGCATTGACCGCATCTTCCCTACATTCTATGACACCTTTGATTCAGGAAAAGCCACCCCGCCACGAATGTCAAACAGCACAGAAATAGACATGAACCACAGCTTTGAATCCATGAACTACTATGGAAGGAGGTCTGTGGATATCAGCAGCTCACCTCCTACATTCTCCTCAATCTCTCAGGAAAGTGATAGACTATCGTCTGCTTCACAGCCAATGATGGAAGATGTGGAGGCTGAAATGAGGAGGCTAAAGCTCGAGCTCAAGCAAACTATGGAAATGTATAGTACTGCCTGTAAAGAGGCACTCACGGCAAAGCAAAAGGCAGTAGAACTCCAGCGCTGGAAATTAGAAGAAGAAAGAAGATTGGAAGAGGCACGGTTAGCTGAGGAAGCTGCAATGGCTATTGTGGAAAAGGAAAGAGCCAAGTCCAAAGCAGCCATGGAGGCAGCTGAAGCAGCTAGGAGAATTGCACAACTGGAAGCGCAGAAGAGAATCAATGCAGAAATGAAAGCAATCAGAGAAGCAGACGAGAAGAAAAAGGCAATCAGTGCTTTACAACAGTCGGATGTCAGGTATAGGAGGTATTCAATCGAGGAAATTGAGGCTGCCACAGAGTTCTTTGCAGAATCTCGCAAGATTGGTGAAGGAGGCTATGGTCCTGTATATCGGTGTAATCTAGATCATACACCTGTGGCAATTAAAGTTCTACGCCCTGATGCAGCTCAAGGAAGATCACAGTTTAACCAAGAGGTTGAAGTACTTAGCTGTATAAGGCATCCTAATATGGTTCTGCTCCTTGGGGCCTGCCCTGAGTATGGATGTTTGGTTTACGAGTACATGGCAAATGGGAGCTTGGAAGACCGCCTCCTGCGAAGAGGAAACAGTCCACCTCTCTCTTGGCAGCTTAGGTTTAGAATTGCAGCTGAAATCGGCACAGGCTTGTTGTTCCTCCACCAAGCCAAACCAGAACCACTTGTGCACCGTGACTTGAAACCTGCCAACATCTTGCTTGACAGGAACTATGTTAGCAAGATCAGCGACGTTGGCTTGGCCAGGCTGGTGCCCCCATCAGTGGCTGACAATGTGACACAGTATCGAATGACATCAACAGCCGGAACATTCTGCTACATTGATCCTGAGTACCAGCAGACAGGCATGCTCGGCGTGAAGTCTGATGTGTACTCTCTTGGAATAATGTTTTTGCAAATGATCACAGCCAAGCCAGCAATGGGACTGACTCATCATGTCGAAAGGTCTATTGAGAAGGGGACTTTCGCTTCAATGCTGGATCCAGCCGTGCAAGATTGGCCTGTCGAAGAAACCATGAACTTTGCCAAGCTGGCTCTCCAATGTGCAGAGTTAAGGCGAAAAGACAGACCGGACCTTGGCAAGGTGATCCTGCCAGAACTCAACAGATTGAGAATGATTGCTGAAGAGACTATGCATCCCACACTGATGGGTGATGACGGTGGCTTTTCACCCCAGCACAGCCAAGTTTCACTGCAGCTAGATGGAATGAGTGGACCAGGCTCGAGATCTGTCGAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Usp

Protein Analysis

625

Amino Acids

70.24

Weight (kDa)

6.92

Isoelectric Point (pI)

57.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 317 - 570 3.9e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 319 - 574 1.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010645)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24370 AT4G31230 AT4G31230
fragaria_vesca FvH4_2g36560 FvH4_2g36560
malus_domestica MD15G1105300.v1.1
prunus_persica Prupe.1G457100_v2.0.a1
pyrus_communis pycom08g10450
rosa_chinensis RchiOBHm_Chr6g0305261
rosa_laevigata RLG00000010904
rosa_multiflora Rmu_ssc0000276.1_g000006
rosa_roxburghii Rroxscaffold_7G00162990 Rroxscaffold_7G00163000
rosa_rugosa Rorug06G0339100 Rorug06G0339200
rosa_samantha Rh6AG450700 Rh6BG450700 Rh6CG464800 Rh6DG451400
rosa_wichuraiana Rw6G039280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1330
AccB1I GGYRCC 1 cut(s) 1387
AccI GTMKAC 1 cut(s) 153
AccII CGCG 1 cut(s) 76
AccIII TCCGGA 1 cut(s) 274
AciI CCGC 3 cut(s) 337, 386, 1189
AclWI GGATC 4 cut(s) 1454, 1610, 1623, 1717
AcoI YGGCCR 1 cut(s) 1377
AcuI CTGAAG 2 cut(s) 798, 1779
AfaI GTAC 5 cut(s) 613, 1086, 1163, 1469, 1508
AfeI AGCGCT 1 cut(s) 665
AfiI CCNNNNNNNGG 6 cut(s) 289, 1142, 1399, 1556, 1712, 1717
AflIII ACRYGT 1 cut(s) 74
AgsI TTSAA 5 cut(s) 434, 915, 1082, 1318, 1608
AjnI CCWGG 2 cut(s) 1379, 1852
Alw21I GWGCWC 3 cut(s) 282, 588, 1308
Alw26I GTCTC 1 cut(s) 1757
Alw44I GTGCAC 1 cut(s) 1304
AlwI GGATC 4 cut(s) 1454, 1610, 1623, 1717
AlwNI CAGNNNCTG 1 cut(s) 1403
Ama87I CYCGRG 3 cut(s) 61, 581, 1858
Aor13HI TCCGGA 1 cut(s) 274
Aor51HI AGCGCT 1 cut(s) 665
AoxI GGCC 4 cut(s) 323, 1128, 1377, 1634
ApaLI GTGCAC 1 cut(s) 1304
ArsI GACNNNNNNTTYG 2 cut(s) 251, 283
AspLEI GCGC 2 cut(s) 666, 811
AspS9I GGNCC 6 cut(s) 254, 324, 983, 1128, 1708, 1850
AsuHPI GGTGA 7 cut(s) 87, 228, 471, 980, 1732, 1797, 1799
AvaI CYCGRG 3 cut(s) 61, 581, 1858
AvaII GGWCC 4 cut(s) 254, 983, 1708, 1850
BaeGI GKGCMC 2 cut(s) 1308, 1392
BalI TGGCCA 1 cut(s) 1379
BamHI GGATCC 1 cut(s) 1615
BanI GGYRCC 1 cut(s) 1387
BanII GRGCYC 2 cut(s) 282, 588
BbsI GAAGAC 1 cut(s) 1191
Bbv12I GWGCWC 3 cut(s) 282, 588, 1308
BbvCI CCTCAGC 1 cut(s) 711
BccI CCATC 6 cut(s) 98, 283, 538, 1402, 1777, 1832
BceAI ACGGC 2 cut(s) 651, 1607
BciT130I CCWGG 2 cut(s) 1381, 1854
BclI TGATCA 1 cut(s) 1536
BcoDI GTCTC 1 cut(s) 1757
BfaI CTAG 4 cut(s) 246, 786, 1004, 1835
BfmI CTRYAG 1 cut(s) 1829
BfoI RGCGCY 1 cut(s) 667
BfuAI ACCTGC 1 cut(s) 1330
BglI GCCNNNNNGGC 2 cut(s) 770, 1667
BglII AGATCT 1 cut(s) 1862
BmcAI AGTACT 2 cut(s) 613, 1086
Bme1390I CCNGG 2 cut(s) 1381, 1854
Bme18I GGWCC 4 cut(s) 254, 983, 1708, 1850
BmeT110I CYCGRG 3 cut(s) 61, 581, 1858
BmgT120I GGNCC 6 cut(s) 254, 324, 983, 1128, 1708, 1850
BmiI GGNNCC 5 cut(s) 12, 107, 1129, 1389, 1617
BmrFI CCNGG 2 cut(s) 1381, 1854
BmsI GCATC 4 cut(s) 348, 1033, 1111, 1780
BoxI GACNNNNGTC 1 cut(s) 523
BpiI GAAGAC 1 cut(s) 1191
BpmI CTGGAG 2 cut(s) 69, 644
Bpu10I CCTNAGC 2 cut(s) 711, 1232
BpuEI CTTGAG 2 cut(s) 572, 1035
BsaJI CCNNGG 3 cut(s) 765, 1123, 1711
BsaWI WCCGGW 4 cut(s) 178, 190, 274, 1705
Bsc4I CCNNNNNNNGG 6 cut(s) 289, 1142, 1399, 1556, 1712, 1717
Bse1I ACTGG 1 cut(s) 807
Bse3DI GCAATG 2 cut(s) 729, 1560
BseAI TCCGGA 1 cut(s) 274
BseBI CCWGG 2 cut(s) 1381, 1854
BseDI CCNNGG 3 cut(s) 765, 1123, 1711
BseGI GGATG 4 cut(s) 898, 1102, 1151, 1771
BseLI CCNNNNNNNGG 6 cut(s) 289, 1142, 1399, 1556, 1712, 1717
BseMI GCAATG 2 cut(s) 729, 1560
BseMII CTCAG 4 cut(s) 518, 702, 1128, 1455
BseNI ACTGG 1 cut(s) 807
BseRI GAGGAG 2 cut(s) 484, 583
BseSI GKGCMC 2 cut(s) 1308, 1392
BseYI CCCAGC 2 cut(s) 326, 1809
BsgI GTGCAG 1 cut(s) 1701
Bsh1236I CGCG 1 cut(s) 76
BshFI GGCC 4 cut(s) 325, 1130, 1379, 1636
BshNI GGYRCC 1 cut(s) 1387
BsiHKAI GWGCWC 3 cut(s) 282, 588, 1308
BsiHKCI CYCGRG 3 cut(s) 61, 581, 1858
BsiSI CCGG 5 cut(s) 179, 191, 275, 1440, 1706
BslFI GGGAC 2 cut(s) 1572, 1609
BslI CCNNNNNNNGG 6 cut(s) 289, 1142, 1399, 1556, 1712, 1717
BsmAI GTCTC 1 cut(s) 1757
BsmFI GGGAC 2 cut(s) 1572, 1609
BsnI GGCC 4 cut(s) 325, 1130, 1379, 1636
BsoBI CYCGRG 3 cut(s) 61, 581, 1858
Bsp1286I GDGCHC 4 cut(s) 282, 588, 1308, 1392
Bsp13I TCCGGA 1 cut(s) 274
Bsp143I GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
Bsp19I CCATGG 1 cut(s) 765
BspACI CCGC 3 cut(s) 337, 386, 1189
BspANI GGCC 4 cut(s) 325, 1130, 1379, 1636
BspCNI CTCAG 4 cut(s) 517, 703, 1129, 1456
BspEI TCCGGA 1 cut(s) 274
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 5 cut(s) 12, 107, 1129, 1389, 1617
BspMAI CTGCAG 1 cut(s) 1833
BspMI ACCTGC 1 cut(s) 1330
BspPI GGATC 4 cut(s) 1454, 1610, 1623, 1717
BspT107I GGYRCC 1 cut(s) 1387
BsrDI GCAATG 2 cut(s) 729, 1560
BsrI ACTGG 1 cut(s) 807
BssECI CCNNGG 3 cut(s) 765, 1123, 1711
BssMI GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
BssT1I CCWWGG 3 cut(s) 765, 1123, 1711
Bst2UI CCWGG 2 cut(s) 1381, 1854
Bst4CI ACNGT 7 cut(s) 705, 888, 1065, 1211, 1310, 1419, 1796
Bst6I CTCTTC 4 cut(s) 690, 809, 1195, 1755
BstAPI GCANNNNNTGC 1 cut(s) 875
BstC8I GCNNGC 4 cut(s) 1132, 1484, 1551, 1668
BstDEI CTNAG 6 cut(s) 504, 711, 1088, 1137, 1232, 1464
BstDSI CCRYGG 1 cut(s) 765
BstEII GGTNACC 1 cut(s) 234
BstENI CCTNNNNNAGG 1 cut(s) 1715
BstF5I GGATG 4 cut(s) 898, 1102, 1151, 1771
BstFNI CGCG 1 cut(s) 76
BstH2I RGCGCY 1 cut(s) 667
BstHHI GCGC 2 cut(s) 666, 811
BstKTI GATC 8 cut(s) 1009, 1061, 1362, 1462, 1539, 1618, 1725, 1865
BstMAI GTCTC 1 cut(s) 1757
BstMBI GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
BstNI CCWGG 2 cut(s) 1381, 1854
BstNSI RCATGY 1 cut(s) 1486
BstPAI GACNNNNGTC 1 cut(s) 523
BstPI GGTNACC 1 cut(s) 234
BstSCI CCNGG 2 cut(s) 1379, 1852
BstSFI CTRYAG 1 cut(s) 1829
BstSLI GKGCMC 2 cut(s) 1308, 1392
BstUI CGCG 1 cut(s) 76
BstV2I GAAGAC 1 cut(s) 1191
BstX2I RGATCY 2 cut(s) 1615, 1862
BstXI CCANNNNNNTGG 1 cut(s) 1783
BstYI RGATCY 2 cut(s) 1615, 1862
BsuRI GGCC 4 cut(s) 325, 1130, 1379, 1636
BtgI CCRYGG 1 cut(s) 765
BtsCI GGATG 4 cut(s) 898, 1102, 1151, 1771
BtsI GCAGTG 1 cut(s) 1826
BtsIMutI CAGTG 4 cut(s) 880, 1404, 1778, 1826
BveI ACCTGC 1 cut(s) 1330
Cac8I GCNNGC 4 cut(s) 1132, 1484, 1551, 1668
CaiI CAGNNNCTG 1 cut(s) 1403
CfoI GCGC 2 cut(s) 666, 811
Cfr13I GGNCC 6 cut(s) 254, 324, 983, 1128, 1708, 1850
CseI GACGC 1 cut(s) 65
Csp6I GTAC 5 cut(s) 612, 1085, 1162, 1468, 1507
CviAII CATG 8 cut(s) 212, 418, 439, 766, 1165, 1483, 1571, 1651
CviQI GTAC 5 cut(s) 612, 1085, 1162, 1468, 1507
DdeI CTNAG 6 cut(s) 504, 711, 1088, 1137, 1232, 1464
DpnI GATC 8 cut(s) 1008, 1060, 1361, 1461, 1538, 1617, 1724, 1864
DpnII GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
EaeI YGGCCR 1 cut(s) 1377
Eam1104I CTCTTC 4 cut(s) 690, 809, 1195, 1755
EarI CTCTTC 4 cut(s) 690, 809, 1195, 1755
Ecl136II GAGCTC 2 cut(s) 280, 586
Eco130I CCWWGG 3 cut(s) 765, 1123, 1711
Eco24I GRGCYC 2 cut(s) 282, 588
Eco32I GATATC 1 cut(s) 469
Eco47I GGWCC 4 cut(s) 254, 983, 1708, 1850
Eco47III AGCGCT 1 cut(s) 665
Eco53kI GAGCTC 2 cut(s) 280, 586
Eco57I CTGAAG 2 cut(s) 798, 1779
Eco88I CYCGRG 3 cut(s) 61, 581, 1858
Eco91I GGTNACC 1 cut(s) 234
EcoICRI GAGCTC 2 cut(s) 280, 586
EcoNI CCTNNNNNAGG 1 cut(s) 1715
EcoO109I RGGNCCY 1 cut(s) 1128
EcoO65I GGTNACC 1 cut(s) 234
EcoRII CCWGG 2 cut(s) 1379, 1852
EcoRV GATATC 1 cut(s) 469
EcoT14I CCWWGG 3 cut(s) 765, 1123, 1711
EcoT22I ATGCAT 1 cut(s) 1773
EcoT38I GRGCYC 2 cut(s) 282, 588
ErhI CCWWGG 3 cut(s) 765, 1123, 1711
FaeI CATG 8 cut(s) 215, 421, 442, 769, 1168, 1486, 1574, 1654
FaqI GGGAC 2 cut(s) 1572, 1609
FatI CATG 8 cut(s) 211, 417, 438, 765, 1164, 1482, 1570, 1650
FauI CCCGC 1 cut(s) 393
FauNDI CATATG 1 cut(s) 148
FbaI TGATCA 1 cut(s) 1536
FblI GTMKAC 1 cut(s) 153
FokI GGATG 4 cut(s) 905, 1089, 1158, 1758
FriOI GRGCYC 2 cut(s) 282, 588
FspBI CTAG 4 cut(s) 246, 786, 1004, 1835
GlaI GCGC 2 cut(s) 665, 810
GsaI CCCAGC 2 cut(s) 330, 1813
GsuI CTGGAG 2 cut(s) 69, 644
HaeII RGCGCY 1 cut(s) 667
HaeIII GGCC 4 cut(s) 325, 1130, 1379, 1636
HapII CCGG 5 cut(s) 179, 191, 275, 1440, 1706
HgaI GACGC 1 cut(s) 65
HhaI GCGC 2 cut(s) 666, 811
Hin1II CATG 8 cut(s) 215, 421, 442, 769, 1168, 1486, 1574, 1654
Hin6I GCGC 2 cut(s) 664, 809
HinP1I GCGC 2 cut(s) 664, 809
HinfI GANTC 7 cut(s) 218, 293, 368, 434, 819, 953, 1564
HpaII CCGG 5 cut(s) 179, 191, 275, 1440, 1706
HphI GGTGA 7 cut(s) 87, 228, 471, 980, 1732, 1797, 1799
Hpy166II GTNNAC 6 cut(s) 154, 1156, 1214, 1306, 1507, 1850
Hpy188I TCNGA 6 cut(s) 142, 223, 298, 845, 892, 1501
Hpy188III TCNNGA 9 cut(s) 14, 63, 275, 318, 372, 506, 1004, 1463, 1860
Hpy8I GTNNAC 6 cut(s) 154, 1156, 1214, 1306, 1507, 1850
Hpy99I CGWCG 1 cut(s) 1370
HpyAV CCTTC 4 cut(s) 315, 447, 965, 1585
HpyCH4III ACNGT 7 cut(s) 705, 888, 1065, 1211, 1310, 1419, 1796
HpyCH4IV ACGT 1 cut(s) 1368
HpyF3I CTNAG 6 cut(s) 504, 711, 1088, 1137, 1232, 1464
HpySE526I ACGT 1 cut(s) 1368
Hsp92II CATG 8 cut(s) 215, 421, 442, 769, 1168, 1486, 1574, 1654
HspAI GCGC 2 cut(s) 664, 809
Kpn2I TCCGGA 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 1536
Kzo9I GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
LmnI GCTCC 6 cut(s) 16, 88, 277, 285, 1125, 1176
LweI GCATC 4 cut(s) 348, 1033, 1111, 1780
MaeI CTAG 4 cut(s) 246, 786, 1004, 1835
MaeII ACGT 1 cut(s) 1368
MaeIII GTNAC 4 cut(s) 116, 234, 1310, 1411
MalI GATC 8 cut(s) 1008, 1060, 1361, 1461, 1538, 1617, 1724, 1864
MboI GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
MflI RGATCY 2 cut(s) 1615, 1862
MhlI GDGCHC 4 cut(s) 282, 588, 1308, 1392
MlsI TGGCCA 1 cut(s) 1379
MluCI AATT 6 cut(s) 5, 671, 792, 924, 1023, 1242
MluI ACGCGT 1 cut(s) 74
MluNI TGGCCA 1 cut(s) 1379
MlyI GAGTC 1 cut(s) 1558
MmeI TCCRAC 1 cut(s) 870
Mox20I TGGCCA 1 cut(s) 1379
Mph1103I ATGCAT 1 cut(s) 1773
MroI TCCGGA 1 cut(s) 274
MscI TGGCCA 1 cut(s) 1379
MseI TTAA 3 cut(s) 1026, 1068, 1688
MslI CAYNNNNRTG 2 cut(s) 210, 1781
Msp20I TGGCCA 1 cut(s) 1379
MspA1I CMGCKG 2 cut(s) 776, 1250
MspI CCGG 5 cut(s) 179, 191, 275, 1440, 1706
MspR9I CCNGG 2 cut(s) 1381, 1854
MvaI CCWGG 2 cut(s) 1381, 1854
MvnI CGCG 1 cut(s) 76
NcoI CCATGG 1 cut(s) 765
NdeI CATATG 1 cut(s) 148
NdeII GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
NlaIII CATG 8 cut(s) 215, 421, 442, 769, 1168, 1486, 1574, 1654
NlaIV GGNNCC 5 cut(s) 12, 107, 1129, 1389, 1617
NmeAIII GCCGAG 1 cut(s) 1467
NmuCI GTSAC 3 cut(s) 234, 1310, 1411
NsiI ATGCAT 1 cut(s) 1773
NspI RCATGY 1 cut(s) 1486
PaeI GCATGC 1 cut(s) 1486
PaeR7I CTCGAG 3 cut(s) 61, 581, 1858
PfeI GAWTC 6 cut(s) 218, 293, 368, 434, 819, 953
PleI GAGTC 1 cut(s) 1558
PpsI GAGTC 1 cut(s) 1558
PshAI GACNNNNGTC 1 cut(s) 523
Psp124BI GAGCTC 2 cut(s) 282, 588
Psp6I CCWGG 2 cut(s) 1379, 1852
PspEI GGTNACC 1 cut(s) 234
PspFI CCCAGC 2 cut(s) 326, 1809
PspGI CCWGG 2 cut(s) 1379, 1852
PspN4I GGNNCC 5 cut(s) 12, 107, 1129, 1389, 1617
PspPI GGNCC 6 cut(s) 254, 324, 983, 1128, 1708, 1850
PspXI VCTCGAGB 1 cut(s) 581
PstI CTGCAG 1 cut(s) 1833
PstNI CAGNNNCTG 1 cut(s) 1403
PsuI RGATCY 2 cut(s) 1615, 1862
PvuII CAGCTG 2 cut(s) 776, 1250
RsaI GTAC 5 cut(s) 613, 1086, 1163, 1469, 1508
RsaNI GTAC 5 cut(s) 612, 1085, 1162, 1468, 1507
RseI CAYNNNNRTG 2 cut(s) 210, 1781
SacI GAGCTC 2 cut(s) 282, 588
SaqAI TTAA 3 cut(s) 1026, 1068, 1688
Sau3AI GATC 8 cut(s) 1006, 1058, 1359, 1459, 1536, 1615, 1722, 1862
Sau96I GGNCC 6 cut(s) 254, 324, 983, 1128, 1708, 1850
ScaI AGTACT 2 cut(s) 613, 1086
SchI GAGTC 1 cut(s) 1558
ScrFI CCNGG 2 cut(s) 1381, 1854
SduI GDGCHC 4 cut(s) 282, 588, 1308, 1392
SfaNI GCATC 4 cut(s) 348, 1033, 1111, 1780
SfcI CTRYAG 1 cut(s) 1829
Sfr274I CTCGAG 3 cut(s) 61, 581, 1858
SinI GGWCC 4 cut(s) 254, 983, 1708, 1850
SlaI CTCGAG 3 cut(s) 61, 581, 1858
SmiMI CAYNNNNRTG 2 cut(s) 210, 1781
SmlI CTYRAG 5 cut(s) 61, 581, 587, 1050, 1858
SmoI CTYRAG 5 cut(s) 61, 581, 587, 1050, 1858
SphI GCATGC 1 cut(s) 1486
Sse9I AATT 6 cut(s) 5, 671, 792, 924, 1023, 1242
SsiI CCGC 3 cut(s) 337, 386, 1189
SspMI CTAG 4 cut(s) 246, 786, 1004, 1835
SstI GAGCTC 2 cut(s) 282, 588
StyD4I CCNGG 2 cut(s) 1379, 1852
StyI CCWWGG 3 cut(s) 765, 1123, 1711
TaaI ACNGT 7 cut(s) 705, 888, 1065, 1211, 1310, 1419, 1796
TaiI ACGT 1 cut(s) 1371
TaqI TCGA 9 cut(s) 41, 62, 582, 918, 1423, 1575, 1641, 1859, 1869
TasI AATT 6 cut(s) 5, 671, 792, 924, 1023, 1242
TatI WGTACW 4 cut(s) 611, 1084, 1161, 1506
TfiI GAWTC 6 cut(s) 218, 293, 368, 434, 819, 953
Tru1I TTAA 3 cut(s) 1026, 1068, 1688
Tru9I TTAA 3 cut(s) 1026, 1068, 1688
TscAI CASTG 4 cut(s) 880, 1404, 1785, 1833
TseFI GTSAC 3 cut(s) 234, 1310, 1411
Tsp45I GTSAC 3 cut(s) 234, 1310, 1411
TspDTI ATGAA 7 cut(s) 17, 185, 231, 434, 455, 848, 1667
TspGWI ACGGA 1 cut(s) 118
TspRI CASTG 4 cut(s) 880, 1404, 1785, 1833
VneI GTGCAC 1 cut(s) 1304
VpaK11BI GGWCC 4 cut(s) 254, 983, 1708, 1850
XagI CCTNNNNNAGG 1 cut(s) 1715
XbaI TCTAGA 1 cut(s) 1003
XceI RCATGY 1 cut(s) 1486
XcmI CCANNNNNNNNNTGG 3 cut(s) 763, 1221, 1552
XhoI CTCGAG 3 cut(s) 61, 581, 1858
XmiI GTMKAC 1 cut(s) 153
XspI CTAG 4 cut(s) 246, 786, 1004, 1835
ZrmI AGTACT 2 cut(s) 613, 1086
Zsp2I ATGCAT 1 cut(s) 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.