Rh6CG464800

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0010645
Physical Location & Seq
Reverse (-)
63713221 .. 63717503
4283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG464800.1

Sequence Viewer

Length: 1938 bp
ATGCTTAACTATTTCAAAAAATTGTGCAGATTCAAACAATCAGATATTCCGGGCACTGTAATGAAATTGGCTCCAGATTTTTGTAATGTATATATCATATCGAAAGGAAAACCTCATTCCTCGAGAGCTGCCACGCGTCCAGCTCCAGCCATCTCACCTTTACGGAACCAAGTTCGTAACCAAATCAACACCACAAAATCAGAGCCATATGTCTACCCTCCTAATAATATGAAAGCACCGGAAAAGCCACCGGAAAAACTACACCATTCACATGATGAATCAGACTTATTCAGGTCACCATTCACTAGGAAAGGTCCAAATGGGAAGTCATATCCGGAGCTCCCTATGATGGATTCTGACATATCTTATGTTAGCTCTGGAAGGCCCAGCATTGACCGCATCTTCCCTACATTCTATGACACCTTTGATTCAGGAAAAGCCACCCCACCACGAATGTCAAACAGCACAGAAATAGACATGAACCACAGCTTTGAATCCATGAACTACTATGGAAGGAGGTCTGTGGATATCAGCAGCTCACCTCCTACATTCTCCTCAATCTCTCAGGAAAGTGATAGACTATCGTCTGCTTCACAGCCAATGATGGAAGATGTGGAGGCTGAAATGAGGAGGCTAAAGCTCGAGCTCAAGCAAACTATGGAAATGTATAGTACTGCCTGTAAAGAGGCACTCACGGCAAAGCAAAAGGCAGTAGAACTCCAGCGCTGGAAATTAGAAGAAGAAAGAAGATTGGAAGAGGCACGGTTAGCTGAGGAAGCTGCAATGGCTATTGTGGAAAAGGAAAGAGCCAAGTCCAAAGCAGCCATGGAGGCAGCTGAAGCAGCTAGGAGAATTGCACAACTGGAAGCGCAGAAGAGAATCAATGCAGAAATGAAAGCAATCAGAGAAGCAGACGAGAAGAAAAAGGCAATCAGTGCTTTACAACAGTCGGATGTCAGGTATAGGAGGTATTCAATAGAGGAAATTGAGGCTGCCACAGAGTTCTTTGCAGAATCTCGCAAGATTGGTGAAGGAGGCTATGGTCCTGTATATCGGTGTAATCTAGATCATACACCTGTGGCAATTAAAGTTCTACGCCCTGATGCAGCTCAAGGAAGATCACAGTTTAACCAAGAGGTTGAAGTACTTAGCTGTATAAGGCATCCTAATATGGTTCTGCTCCTTGGGGCCTGCCCTGAGTATGGATGTTTGGTTTACGAGTACATGGCAAATGGGAGCTTGGAAGACCGCCTCCTGCGAAGAGGAAACAGTCCACCTCTCTCTTGGCAGCTTAGGTTTAGAATTGCAGCTGAAATCGGCACAGGCTTGTTGTTCCTCCACCAAGCCAAACCAGAACCACTTGTGCACCGTGACTTGAAACCTGCCAACATCTTGCTTGACAGGAACTATGTTAGCAAGATCAGCGACGTTGGCTTGGCCAGGCTGGTGCCCCCATCAGTGGCTGACAATGTGACACAGTATCGAATGACATCAACAGCCGGAACATTCTGCTACATTGATCCTGAGTACCAGCAGACAGGCATGCTCGGCGTGAAGTCTGATGTGTACTCTCTTGGAATAATGTTTTTGCAAATGATCACAGCCAAGCCAGCAATGGGACTGACTCATCATGTCGAAAGGTCTATTGAGAAGGGGACTTTCGCTTCCATGCTGGATCCAGCCGTGCAAGATTGGCCTGTCGAAGAAACCATGAACTTTGCCAAGCTGGCTCTCCAATGTGCAGAGTTAAGGCGAAAAGACAGACCGGACCTTGGCAAGGTGATCCTGCCAGAACTCAACAGATTGAGAATGATTGCTGAAGAGACTATGCATCCCACACTGATGGGTGATGACGGTGGCTTTTCACCCCAGCACAGCCAAGTTTCACTGCAGCTAGATGGAATGAGCGGACCAGGCTCCAGATCTGTCGAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Usp

Protein Analysis

645

Amino Acids

72.61

Weight (kDa)

7.95

Isoelectric Point (pI)

56.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 337 - 590 4.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 339 - 594 1.2e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010645)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24370 AT4G31230 AT4G31230
fragaria_vesca FvH4_2g36560 FvH4_2g36560
malus_domestica MD15G1105300.v1.1
prunus_persica Prupe.1G457100_v2.0.a1
pyrus_communis pycom08g10450
rosa_chinensis RchiOBHm_Chr6g0305261
rosa_laevigata RLG00000010904
rosa_multiflora Rmu_ssc0000276.1_g000006
rosa_roxburghii Rroxscaffold_7G00162990 Rroxscaffold_7G00163000
rosa_rugosa Rorug06G0339100 Rorug06G0339200
rosa_samantha Rh6AG450700 Rh6BG450700 Rh6CG464800 Rh6DG451400
rosa_wichuraiana Rw6G039280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1390
AccB1I GGYRCC 1 cut(s) 1447
AccBSI CCGCTC 1 cut(s) 1908
AccI GTMKAC 1 cut(s) 213
AccII CGCG 1 cut(s) 136
AccIII TCCGGA 1 cut(s) 334
AciI CCGC 3 cut(s) 397, 1249, 1908
AclWI GGATC 4 cut(s) 1514, 1670, 1683, 1777
AcoI YGGCCR 1 cut(s) 1437
AcuI CTGAAG 2 cut(s) 858, 1839
AfaI GTAC 5 cut(s) 673, 1146, 1223, 1529, 1568
AfeI AGCGCT 1 cut(s) 725
AfiI CCNNNNNNNGG 6 cut(s) 349, 1202, 1459, 1616, 1772, 1777
AflIII ACRYGT 1 cut(s) 134
AgsI TTSAA 6 cut(s) 16, 34, 494, 975, 1142, 1378
AjnI CCWGG 2 cut(s) 1439, 1912
Alw21I GWGCWC 3 cut(s) 342, 648, 1368
Alw26I GTCTC 1 cut(s) 1817
Alw44I GTGCAC 1 cut(s) 1364
AlwI GGATC 4 cut(s) 1514, 1670, 1683, 1777
AlwNI CAGNNNCTG 1 cut(s) 1463
Ama87I CYCGRG 2 cut(s) 121, 641
Aor13HI TCCGGA 1 cut(s) 334
Aor51HI AGCGCT 1 cut(s) 725
AoxI GGCC 4 cut(s) 383, 1188, 1437, 1694
ApaLI GTGCAC 1 cut(s) 1364
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
AspLEI GCGC 2 cut(s) 726, 871
AspS9I GGNCC 6 cut(s) 314, 384, 1043, 1188, 1768, 1910
AsuC2I CCSGG 1 cut(s) 51
AsuHPI GGTGA 7 cut(s) 147, 288, 531, 1040, 1792, 1857, 1859
AvaI CYCGRG 2 cut(s) 121, 641
AvaII GGWCC 4 cut(s) 314, 1043, 1768, 1910
BaeGI GKGCMC 3 cut(s) 56, 1368, 1452
BalI TGGCCA 1 cut(s) 1439
BamHI GGATCC 1 cut(s) 1675
BanI GGYRCC 1 cut(s) 1447
BanII GRGCYC 2 cut(s) 342, 648
BbsI GAAGAC 1 cut(s) 1251
Bbv12I GWGCWC 3 cut(s) 342, 648, 1368
BbvCI CCTCAGC 1 cut(s) 771
BccI CCATC 6 cut(s) 158, 343, 598, 1462, 1837, 1892
BceAI ACGGC 2 cut(s) 711, 1667
BciT130I CCWGG 2 cut(s) 1441, 1914
BclI TGATCA 1 cut(s) 1596
BcnI CCSGG 1 cut(s) 51
BcoDI GTCTC 1 cut(s) 1817
BfaI CTAG 4 cut(s) 306, 846, 1064, 1895
BfmI CTRYAG 1 cut(s) 1889
BfoI RGCGCY 1 cut(s) 727
BfuAI ACCTGC 1 cut(s) 1390
BglI GCCNNNNNGGC 2 cut(s) 830, 1727
BglII AGATCT 1 cut(s) 1922
BmcAI AGTACT 2 cut(s) 673, 1146
Bme1390I CCNGG 3 cut(s) 51, 1441, 1914
Bme18I GGWCC 4 cut(s) 314, 1043, 1768, 1910
BmeT110I CYCGRG 2 cut(s) 121, 641
BmgT120I GGNCC 6 cut(s) 314, 384, 1043, 1188, 1768, 1910
BmiI GGNNCC 6 cut(s) 72, 167, 1189, 1449, 1677, 1918
BmrFI CCNGG 3 cut(s) 51, 1441, 1914
BmsI GCATC 4 cut(s) 408, 1093, 1171, 1840
BoxI GACNNNNGTC 1 cut(s) 583
BpiI GAAGAC 1 cut(s) 1251
BpmI CTGGAG 4 cut(s) 57, 129, 704, 1903
Bpu10I CCTNAGC 2 cut(s) 771, 1292
BpuEI CTTGAG 2 cut(s) 632, 1095
BpuMI CCSGG 1 cut(s) 51
BsaJI CCNNGG 3 cut(s) 825, 1183, 1771
BsaWI WCCGGW 4 cut(s) 238, 250, 334, 1765
Bsc4I CCNNNNNNNGG 6 cut(s) 349, 1202, 1459, 1616, 1772, 1777
Bse1I ACTGG 1 cut(s) 867
Bse3DI GCAATG 2 cut(s) 789, 1620
BseAI TCCGGA 1 cut(s) 334
BseBI CCWGG 2 cut(s) 1441, 1914
BseDI CCNNGG 3 cut(s) 825, 1183, 1771
BseGI GGATG 4 cut(s) 958, 1162, 1211, 1831
BseLI CCNNNNNNNGG 6 cut(s) 349, 1202, 1459, 1616, 1772, 1777
BseMI GCAATG 2 cut(s) 789, 1620
BseMII CTCAG 4 cut(s) 578, 762, 1188, 1515
BseNI ACTGG 1 cut(s) 867
BseRI GAGGAG 2 cut(s) 544, 643
BseSI GKGCMC 3 cut(s) 56, 1368, 1452
BseYI CCCAGC 2 cut(s) 386, 1869
BsgI GTGCAG 2 cut(s) 46, 1761
Bsh1236I CGCG 1 cut(s) 136
BshFI GGCC 4 cut(s) 385, 1190, 1439, 1696
BshNI GGYRCC 1 cut(s) 1447
BsiHKAI GWGCWC 3 cut(s) 342, 648, 1368
BsiHKCI CYCGRG 2 cut(s) 121, 641
BsiSI CCGG 6 cut(s) 50, 239, 251, 335, 1500, 1766
BslFI GGGAC 2 cut(s) 1632, 1669
BslI CCNNNNNNNGG 6 cut(s) 349, 1202, 1459, 1616, 1772, 1777
BsmAI GTCTC 1 cut(s) 1817
BsmFI GGGAC 2 cut(s) 1632, 1669
BsnI GGCC 4 cut(s) 385, 1190, 1439, 1696
BsoBI CYCGRG 2 cut(s) 121, 641
Bsp1286I GDGCHC 5 cut(s) 56, 342, 648, 1368, 1452
Bsp13I TCCGGA 1 cut(s) 334
Bsp143I GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
Bsp19I CCATGG 1 cut(s) 825
BspACI CCGC 3 cut(s) 397, 1249, 1908
BspANI GGCC 4 cut(s) 385, 1190, 1439, 1696
BspCNI CTCAG 4 cut(s) 577, 763, 1189, 1516
BspEI TCCGGA 1 cut(s) 334
BspFNI CGCG 1 cut(s) 136
BspLI GGNNCC 6 cut(s) 72, 167, 1189, 1449, 1677, 1918
BspMAI CTGCAG 1 cut(s) 1893
BspMI ACCTGC 1 cut(s) 1390
BspPI GGATC 4 cut(s) 1514, 1670, 1683, 1777
BspT107I GGYRCC 1 cut(s) 1447
BsrBI CCGCTC 1 cut(s) 1908
BsrDI GCAATG 2 cut(s) 789, 1620
BsrI ACTGG 1 cut(s) 867
BssECI CCNNGG 3 cut(s) 825, 1183, 1771
BssMI GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
BssT1I CCWWGG 3 cut(s) 825, 1183, 1771
Bst2UI CCWGG 2 cut(s) 1441, 1914
Bst4CI ACNGT 8 cut(s) 58, 765, 948, 1125, 1271, 1370, 1479, 1856
Bst6I CTCTTC 4 cut(s) 750, 869, 1255, 1815
BstAPI GCANNNNNTGC 1 cut(s) 935
BstC8I GCNNGC 4 cut(s) 1192, 1544, 1611, 1728
BstDEI CTNAG 6 cut(s) 564, 771, 1148, 1197, 1292, 1524
BstDSI CCRYGG 1 cut(s) 825
BstEII GGTNACC 1 cut(s) 294
BstENI CCTNNNNNAGG 1 cut(s) 1775
BstF5I GGATG 4 cut(s) 958, 1162, 1211, 1831
BstFNI CGCG 1 cut(s) 136
BstH2I RGCGCY 1 cut(s) 727
BstHHI GCGC 2 cut(s) 726, 871
BstKTI GATC 8 cut(s) 1069, 1121, 1422, 1522, 1599, 1678, 1785, 1925
BstMAI GTCTC 1 cut(s) 1817
BstMBI GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
BstNI CCWGG 2 cut(s) 1441, 1914
BstNSI RCATGY 1 cut(s) 1546
BstPAI GACNNNNGTC 1 cut(s) 583
BstPI GGTNACC 1 cut(s) 294
BstSCI CCNGG 3 cut(s) 49, 1439, 1912
BstSFI CTRYAG 1 cut(s) 1889
BstSLI GKGCMC 3 cut(s) 56, 1368, 1452
BstUI CGCG 1 cut(s) 136
BstV2I GAAGAC 1 cut(s) 1251
BstX2I RGATCY 2 cut(s) 1675, 1922
BstXI CCANNNNNNTGG 1 cut(s) 1843
BstYI RGATCY 2 cut(s) 1675, 1922
BsuRI GGCC 4 cut(s) 385, 1190, 1439, 1696
BtgI CCRYGG 1 cut(s) 825
BtsCI GGATG 4 cut(s) 958, 1162, 1211, 1831
BtsI GCAGTG 1 cut(s) 1886
BtsIMutI CAGTG 5 cut(s) 54, 940, 1464, 1838, 1886
BveI ACCTGC 1 cut(s) 1390
Cac8I GCNNGC 4 cut(s) 1192, 1544, 1611, 1728
CaiI CAGNNNCTG 1 cut(s) 1463
CfoI GCGC 2 cut(s) 726, 871
Cfr13I GGNCC 6 cut(s) 314, 384, 1043, 1188, 1768, 1910
CseI GACGC 1 cut(s) 125
Csp6I GTAC 5 cut(s) 672, 1145, 1222, 1528, 1567
CviAII CATG 9 cut(s) 272, 478, 499, 826, 1225, 1543, 1631, 1669, 1711
CviQI GTAC 5 cut(s) 672, 1145, 1222, 1528, 1567
DdeI CTNAG 6 cut(s) 564, 771, 1148, 1197, 1292, 1524
DpnI GATC 8 cut(s) 1068, 1120, 1421, 1521, 1598, 1677, 1784, 1924
DpnII GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
EaeI YGGCCR 1 cut(s) 1437
Eam1104I CTCTTC 4 cut(s) 750, 869, 1255, 1815
EarI CTCTTC 4 cut(s) 750, 869, 1255, 1815
Ecl136II GAGCTC 2 cut(s) 340, 646
Eco130I CCWWGG 3 cut(s) 825, 1183, 1771
Eco24I GRGCYC 2 cut(s) 342, 648
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 4 cut(s) 314, 1043, 1768, 1910
Eco47III AGCGCT 1 cut(s) 725
Eco53kI GAGCTC 2 cut(s) 340, 646
Eco57I CTGAAG 2 cut(s) 858, 1839
Eco88I CYCGRG 2 cut(s) 121, 641
Eco91I GGTNACC 1 cut(s) 294
EcoICRI GAGCTC 2 cut(s) 340, 646
EcoNI CCTNNNNNAGG 1 cut(s) 1775
EcoO109I RGGNCCY 1 cut(s) 1188
EcoO65I GGTNACC 1 cut(s) 294
EcoRII CCWGG 2 cut(s) 1439, 1912
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 3 cut(s) 825, 1183, 1771
EcoT22I ATGCAT 1 cut(s) 1833
EcoT38I GRGCYC 2 cut(s) 342, 648
ErhI CCWWGG 3 cut(s) 825, 1183, 1771
FaeI CATG 9 cut(s) 275, 481, 502, 829, 1228, 1546, 1634, 1672, 1714
FaqI GGGAC 2 cut(s) 1632, 1669
FatI CATG 9 cut(s) 271, 477, 498, 825, 1224, 1542, 1630, 1668, 1710
FauNDI CATATG 1 cut(s) 208
FbaI TGATCA 1 cut(s) 1596
FblI GTMKAC 1 cut(s) 213
FokI GGATG 4 cut(s) 965, 1149, 1218, 1818
FriOI GRGCYC 2 cut(s) 342, 648
FspBI CTAG 4 cut(s) 306, 846, 1064, 1895
GlaI GCGC 2 cut(s) 725, 870
GsaI CCCAGC 2 cut(s) 390, 1873
GsuI CTGGAG 4 cut(s) 57, 129, 704, 1903
HaeII RGCGCY 1 cut(s) 727
HaeIII GGCC 4 cut(s) 385, 1190, 1439, 1696
HapII CCGG 6 cut(s) 50, 239, 251, 335, 1500, 1766
HgaI GACGC 1 cut(s) 125
HhaI GCGC 2 cut(s) 726, 871
Hin1II CATG 9 cut(s) 275, 481, 502, 829, 1228, 1546, 1634, 1672, 1714
Hin6I GCGC 2 cut(s) 724, 869
HinP1I GCGC 2 cut(s) 724, 869
HinfI GANTC 8 cut(s) 30, 278, 353, 428, 494, 879, 1013, 1624
HpaII CCGG 6 cut(s) 50, 239, 251, 335, 1500, 1766
HphI GGTGA 7 cut(s) 147, 288, 531, 1040, 1792, 1857, 1859
Hpy166II GTNNAC 5 cut(s) 214, 1216, 1274, 1366, 1567
Hpy188I TCNGA 7 cut(s) 43, 202, 283, 358, 905, 952, 1561
Hpy188III TCNNGA 9 cut(s) 74, 123, 335, 378, 432, 566, 1064, 1523, 1920
Hpy8I GTNNAC 5 cut(s) 214, 1216, 1274, 1366, 1567
Hpy99I CGWCG 1 cut(s) 1430
HpyAV CCTTC 4 cut(s) 375, 507, 1025, 1645
HpyCH4III ACNGT 8 cut(s) 58, 765, 948, 1125, 1271, 1370, 1479, 1856
HpyCH4IV ACGT 1 cut(s) 1428
HpyF3I CTNAG 6 cut(s) 564, 771, 1148, 1197, 1292, 1524
HpySE526I ACGT 1 cut(s) 1428
Hsp92II CATG 9 cut(s) 275, 481, 502, 829, 1228, 1546, 1634, 1672, 1714
HspAI GCGC 2 cut(s) 724, 869
Kpn2I TCCGGA 1 cut(s) 334
Ksp22I TGATCA 1 cut(s) 1596
Kzo9I GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
LmnI GCTCC 7 cut(s) 76, 148, 337, 345, 1185, 1236, 1922
LweI GCATC 4 cut(s) 408, 1093, 1171, 1840
MaeI CTAG 4 cut(s) 306, 846, 1064, 1895
MaeII ACGT 1 cut(s) 1428
MaeIII GTNAC 4 cut(s) 176, 294, 1370, 1471
MalI GATC 8 cut(s) 1068, 1120, 1421, 1521, 1598, 1677, 1784, 1924
MbiI CCGCTC 1 cut(s) 1908
MboI GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
MflI RGATCY 2 cut(s) 1675, 1922
MhlI GDGCHC 5 cut(s) 56, 342, 648, 1368, 1452
MlsI TGGCCA 1 cut(s) 1439
MluCI AATT 7 cut(s) 20, 65, 731, 852, 984, 1083, 1302
MluI ACGCGT 1 cut(s) 134
MluNI TGGCCA 1 cut(s) 1439
MlyI GAGTC 1 cut(s) 1618
MmeI TCCRAC 1 cut(s) 930
Mox20I TGGCCA 1 cut(s) 1439
Mph1103I ATGCAT 1 cut(s) 1833
MroI TCCGGA 1 cut(s) 334
MscI TGGCCA 1 cut(s) 1439
MseI TTAA 4 cut(s) 6, 1086, 1128, 1748
MslI CAYNNNNRTG 3 cut(s) 59, 270, 1841
Msp20I TGGCCA 1 cut(s) 1439
MspA1I CMGCKG 2 cut(s) 836, 1310
MspI CCGG 6 cut(s) 50, 239, 251, 335, 1500, 1766
MspR9I CCNGG 3 cut(s) 51, 1441, 1914
MvaI CCWGG 2 cut(s) 1441, 1914
MvnI CGCG 1 cut(s) 136
NciI CCSGG 1 cut(s) 51
NcoI CCATGG 1 cut(s) 825
NdeI CATATG 1 cut(s) 208
NdeII GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
NlaIII CATG 9 cut(s) 275, 481, 502, 829, 1228, 1546, 1634, 1672, 1714
NlaIV GGNNCC 6 cut(s) 72, 167, 1189, 1449, 1677, 1918
NmeAIII GCCGAG 1 cut(s) 1527
NmuCI GTSAC 3 cut(s) 294, 1370, 1471
NsiI ATGCAT 1 cut(s) 1833
NspI RCATGY 1 cut(s) 1546
PaeI GCATGC 1 cut(s) 1546
PaeR7I CTCGAG 2 cut(s) 121, 641
PfeI GAWTC 7 cut(s) 30, 278, 353, 428, 494, 879, 1013
PleI GAGTC 1 cut(s) 1618
PpsI GAGTC 1 cut(s) 1618
PshAI GACNNNNGTC 1 cut(s) 583
Psp124BI GAGCTC 2 cut(s) 342, 648
Psp6I CCWGG 2 cut(s) 1439, 1912
PspEI GGTNACC 1 cut(s) 294
PspFI CCCAGC 2 cut(s) 386, 1869
PspGI CCWGG 2 cut(s) 1439, 1912
PspN4I GGNNCC 6 cut(s) 72, 167, 1189, 1449, 1677, 1918
PspPI GGNCC 6 cut(s) 314, 384, 1043, 1188, 1768, 1910
PspXI VCTCGAGB 1 cut(s) 641
PstI CTGCAG 1 cut(s) 1893
PstNI CAGNNNCTG 1 cut(s) 1463
PsuI RGATCY 2 cut(s) 1675, 1922
PvuII CAGCTG 2 cut(s) 836, 1310
RsaI GTAC 5 cut(s) 673, 1146, 1223, 1529, 1568
RsaNI GTAC 5 cut(s) 672, 1145, 1222, 1528, 1567
RseI CAYNNNNRTG 3 cut(s) 59, 270, 1841
SacI GAGCTC 2 cut(s) 342, 648
SaqAI TTAA 4 cut(s) 6, 1086, 1128, 1748
Sau3AI GATC 8 cut(s) 1066, 1118, 1419, 1519, 1596, 1675, 1782, 1922
Sau96I GGNCC 6 cut(s) 314, 384, 1043, 1188, 1768, 1910
ScaI AGTACT 2 cut(s) 673, 1146
SchI GAGTC 1 cut(s) 1618
ScrFI CCNGG 3 cut(s) 51, 1441, 1914
SduI GDGCHC 5 cut(s) 56, 342, 648, 1368, 1452
SfaNI GCATC 4 cut(s) 408, 1093, 1171, 1840
SfcI CTRYAG 1 cut(s) 1889
Sfr274I CTCGAG 2 cut(s) 121, 641
SinI GGWCC 4 cut(s) 314, 1043, 1768, 1910
SlaI CTCGAG 2 cut(s) 121, 641
SmiMI CAYNNNNRTG 3 cut(s) 59, 270, 1841
SmlI CTYRAG 4 cut(s) 121, 641, 647, 1110
SmoI CTYRAG 4 cut(s) 121, 641, 647, 1110
SphI GCATGC 1 cut(s) 1546
Sse9I AATT 7 cut(s) 20, 65, 731, 852, 984, 1083, 1302
SsiI CCGC 3 cut(s) 397, 1249, 1908
SspMI CTAG 4 cut(s) 306, 846, 1064, 1895
SstI GAGCTC 2 cut(s) 342, 648
StyD4I CCNGG 3 cut(s) 49, 1439, 1912
StyI CCWWGG 3 cut(s) 825, 1183, 1771
TaaI ACNGT 8 cut(s) 58, 765, 948, 1125, 1271, 1370, 1479, 1856
TaiI ACGT 1 cut(s) 1431
TaqI TCGA 7 cut(s) 101, 122, 642, 1483, 1635, 1701, 1929
TasI AATT 7 cut(s) 20, 65, 731, 852, 984, 1083, 1302
TatI WGTACW 4 cut(s) 671, 1144, 1221, 1566
TfiI GAWTC 7 cut(s) 30, 278, 353, 428, 494, 879, 1013
Tru1I TTAA 4 cut(s) 6, 1086, 1128, 1748
Tru9I TTAA 4 cut(s) 6, 1086, 1128, 1748
TscAI CASTG 5 cut(s) 61, 940, 1464, 1845, 1893
TseFI GTSAC 3 cut(s) 294, 1370, 1471
Tsp45I GTSAC 3 cut(s) 294, 1370, 1471
TspDTI ATGAA 7 cut(s) 77, 245, 291, 494, 515, 908, 1727
TspGWI ACGGA 1 cut(s) 178
TspRI CASTG 5 cut(s) 61, 940, 1464, 1845, 1893
VneI GTGCAC 1 cut(s) 1364
VpaK11BI GGWCC 4 cut(s) 314, 1043, 1768, 1910
XagI CCTNNNNNAGG 1 cut(s) 1775
XbaI TCTAGA 1 cut(s) 1063
XceI RCATGY 1 cut(s) 1546
XcmI CCANNNNNNNNNTGG 3 cut(s) 823, 1281, 1612
XhoI CTCGAG 2 cut(s) 121, 641
XmiI GTMKAC 1 cut(s) 213
XspI CTAG 4 cut(s) 306, 846, 1064, 1895
ZrmI AGTACT 2 cut(s) 673, 1146
Zsp2I ATGCAT 1 cut(s) 1833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.