Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004183

Physical Location & Seq

Genomic Coordinates Forward (+)

28810646 .. 28814246

Gene Structure 3601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00189070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGTCGCTGACGAACGAAATCGCCACCGTAATGGAAAGCCTGGATCAGCTGCCGGCGGCCCTACTCGCCACAATCCTGACGAAGCTCGACGTGTCCTCCATCTGCTCCGTCGCTTCCACCTGCACCGTCTTCAAGGCCTGCGCTCAACACATCCTCGCCTTCATCCCCTCCTTCCTTCTCCTCGAAACTGCGCCTTCTATGGAATTGTTGAGGCCTCTGTTGCCGCCAAACCCTTGGCTGAAGACGATGAAGGTGAACTGCGGCCGGCTCGACGATTCGGCCATCCAGATTCTGCTGCAGCCTTCCCTGCACGAGCTTTGCATGCTCAATTGCGCGGATTTTAGCGGCAAATTGCTCTCGGAGATCGGAGGCCGGTGCAAGGATCTGAGGTCTCTCTGCTTGGGGTCAGTCGCTGAAAAAAGAGGGCGAGCTATTCATATTTCTGATTTGGAGGAGTTACTCAGTGGTTGCACTCATTTAGAAGCATTGATCCTGATGTTTGATGTCTCGTTTTCGCTGCGTCATGACTTTGCTCGAGTTTGGGCTTTGGCCTCTGAGAAACTCACTTCTCTTGAGATTGGCTACGTTTCATCTGTAATGGTGACTGAACTACTTAGCCCAAATTTCGAATTACCACAGTCAGCAAATCATATTCAGCCTTCCATATTGCCTAATATTCATAAATTGTCCCTTTCTGTCGACTACATAACTGATGCCATGGTTGGTACTATATCTAAAGGTCTCACCTCCTTGACCCATTTGGATCTTCGAGATGCACCCCTCATTGAACCAAGAGTTACATTTGACCTTACCAACTCTGGCCTTCAATTGATAAATCAGCATGGAAAGTTGAAGCATTTATCATTGGTTCGGAGCCAGGAGTTTCTCTTCACATATTTCAAACGACAACTTCCCTTTTCTTTAACACACGTTAGCTTGAGACGGTGTACACTTTTAACCAACCATGCAGTCACTAATTTGGCTTCTAACAAGGATCTAAAAGTTCTTGATTTGAGAGATTGCAGAAACCTTGGGAATGAAGCCCTCCGAGCCATAGGCAATCTTCATAATTTGAAGACTTTGTTATTGGATGGCTCCGATATCAGTGATCTGGGATTATCATACTTAAGACCAAGGGTTATAAGTTCACTAATTACATTGTCTGTTAGAGGCTGCAAGAAACTGACTGATAAATGCATCTCTGCTCTATTTGATGGCTCTTCTAAATTGGCGTTGCAAGAATTGGACCTATCAAATCTTCCGAATCTTTCTGACAATGGAGTTTTATTACTTGCAAGAAGTAGGATTCCGTTATTGGAACTACGAATGCGACAATGCCCACTCATAGGTGACACATCTGTAGTGGCATTAGCTTCAATGCTGGTAGACGAGGAGAGGTGGCATGGTAATTGCTTGCGGTTGTTGGATCTGTTTAACTGTGGTGGCATTACCACGGTTGCATTTCGGTGGCTGAAGAAACCATATTTTCCGAGGCTAAGGTGGTTGGGGGTTACAGGTTGTGTAAATAGAGATACAGTAGATGCTTTAGCTCGTAGTAGACCGTTCTTGCATGTGTCATGCCATGGTGAGGAGCTGGGGGCAGAGCAGTGGGATACCGGGGACGACTTTCATATGCATGACTATGATGAGATGGATGAGCTTGAACAGTGGCTTCAAGAAGGTGACTATGAGAGTGGCGATGAAGAGATGGTGGAGGCAGAAAATGTTGCAGAAGCAATGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box LRR_6

Protein Analysis

581

Amino Acids

64.64

Weight (kDa)

5.49

Isoelectric Point (pI)

49.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7885	PF25372	63 - 302	7.8e-42	Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885	PF25372	307 - 534	1.4e-42	Leucine Rich Repeat Domain of unknown function (DUF7885)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17020 AT2G17020 AT2G17020
fragaria_vesca	FvH4_2g15790 FvH4_2g15790 FvH4_2g15790 FvH4_2g15790 FvH4_2g15790
malus_domestica	MD05G1089200.v1.1 MD05G1127000.v1.1 MD10G1130200.v1.1 MD10G1130400.v1.1
prunus_persica	Prupe.8G170700_v2.0.a1 Prupe.8G170700_v2.0.a1 Prupe.8G170700_v2.0.a1 Prupe.8G170700_v2.0.a1
pyrus_communis	pycom05g12280 pycom10g11150 pycom10g11170
rosa_chinensis	RchiOBHm_Chr6g0279151
rosa_laevigata	RLG00000013161
rosa_multiflora	Rmu_co8081166.1_g000001 Rmu_sc0014203.1_g000013 Rmu_sc0014536.1_g000008
rosa_roxburghii	Rroxscaffold_7G00189070
rosa_rugosa	Rorug06G0123000 Rorug06G0123100 Rorug06G0123200
rosa_samantha	Rh6AG231600 Rh6BG236500 Rh6CG238500 Rh6DG230100
rosa_wichuraiana	Rw6G020270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
AarI	CACCTGC	1 cut(s)	128
Acc36I	ACCTGC	1 cut(s)	128
AccI	GTMKAC	3 cut(s)	699, 1386, 1558
AccII	CGCG	1 cut(s)	335
AciI	CCGC	6 cut(s)	56, 224, 261, 335, 345, 1417
AclWI	GGATC	6 cut(s)	51, 390, 484, 771, 1002, 1434
AcoI	YGGCCR	2 cut(s)	262, 279
AcsI	RAATTY	1 cut(s)	622
AcuI	CTGAAG	2 cut(s)	260, 1493
AfaI	GTAC	2 cut(s)	727, 949
AfiI	CCNNNNNNNGG	3 cut(s)	379, 1346, 1588
AflII	CTTAAG	1 cut(s)	1126
AflIII	ACRYGT	2 cut(s)	90, 928
AgsI	TTSAA	9 cut(s)	133, 788, 827, 853, 901, 1075, 1377, 1664, 1676
AjiI	CACGTC	1 cut(s)	91
AjnI	CCWGG	2 cut(s)	39, 876
AluBI	AGCT	9 cut(s)	49, 85, 316, 431, 936, 1373, 1550, 1594, 1660
AluI	AGCT	9 cut(s)	49, 85, 316, 431, 936, 1373, 1550, 1594, 1660
Alw26I	GTCTC	4 cut(s)	396, 511, 746, 934
AlwI	GGATC	6 cut(s)	51, 390, 484, 771, 1002, 1434
AlwNI	CAGNNNCTG	2 cut(s)	292, 413
Ama87I	CYCGRG	1 cut(s)	534
AoxI	GGCC	8 cut(s)	57, 135, 212, 262, 279, 370, 549, 820
ApeKI	GCWGC	5 cut(s)	49, 295, 298, 517, 1173
ApoI	RAATTY	1 cut(s)	622
AspLEI	GCGC	3 cut(s)	143, 193, 335
AspS9I	GGNCC	2 cut(s)	58, 1246
AsuC2I	CCSGG	1 cut(s)	1618
AsuHPI	GGTGA	6 cut(s)	265, 613, 736, 1361, 1598, 1694
AsuII	TTCGAA	1 cut(s)	627
AvaI	CYCGRG	1 cut(s)	534
AvaII	GGWCC	1 cut(s)	1246
BauI	CACGAG	1 cut(s)	311
BbsI	GAAGAC	3 cut(s)	121, 248, 1082
BbvI	GCAGC	5 cut(s)	36, 282, 310, 504, 1160
BccI	CCATC	6 cut(s)	107, 290, 1085, 1208, 1645, 1702
BciT130I	CCWGG	2 cut(s)	41, 878
BciVI	GTATCC	1 cut(s)	1606
BcnI	CCSGG	1 cut(s)	1618
BcoDI	GTCTC	4 cut(s)	396, 511, 746, 934
BfmI	CTRYAG	2 cut(s)	296, 1359
BfrI	CTTAAG	1 cut(s)	1126
BfuAI	ACCTGC	1 cut(s)	128
BfuI	GTATCC	1 cut(s)	1606
BisI	GCNGC	9 cut(s)	50, 57, 224, 262, 296, 299, 346, 518, 1174
BlsI	GCNGC	9 cut(s)	51, 58, 225, 263, 297, 300, 347, 519, 1175
Bme1390I	CCNGG	3 cut(s)	41, 878, 1618
Bme18I	GGWCC	1 cut(s)	1246
BmeT110I	CYCGRG	1 cut(s)	534
BmgBI	CACGTC	1 cut(s)	91
BmgT120I	GGNCC	2 cut(s)	58, 1246
BmiI	GGNNCC	2 cut(s)	875, 1096
BmrFI	CCNGG	3 cut(s)	41, 878, 1618
BmsI	GCATC	4 cut(s)	703, 763, 1206, 1531
BpiI	GAAGAC	3 cut(s)	121, 248, 1082
Bpu10I	CCTNAGC	1 cut(s)	1496
Bpu14I	TTCGAA	1 cut(s)	627
BpuEI	CTTGAG	2 cut(s)	593, 958
BpuMI	CCSGG	1 cut(s)	1618
BsaI	GGTCTC	2 cut(s)	396, 746
BsaJI	CCNNGG	8 cut(s)	233, 717, 1030, 1133, 1452, 1490, 1582, 1617
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	3 cut(s)	379, 1346, 1588
Bse118I	RCCGGY	3 cut(s)	52, 264, 372
Bse3DI	GCAATG	1 cut(s)	1743
BseBI	CCWGG	2 cut(s)	41, 878
BseDI	CCNNGG	8 cut(s)	233, 717, 1030, 1133, 1452, 1490, 1582, 1617
BseGI	GGATG	5 cut(s)	150, 162, 282, 1096, 1660
BseLI	CCNNNNNNNGG	3 cut(s)	379, 1346, 1588
BseMI	GCAATG	1 cut(s)	1743
BseMII	CTCAG	3 cut(s)	377, 475, 546
BseRI	GAGGAG	4 cut(s)	170, 467, 1406, 1604
BseX3I	CGGCCG	1 cut(s)	262
BseXI	GCAGC	5 cut(s)	36, 282, 310, 504, 1160
BseYI	CCCAGC	1 cut(s)	1594
BsgI	GTGCAG	2 cut(s)	106, 293
Bsh1236I	CGCG	1 cut(s)	335
Bsh1285I	CGRYCG	1 cut(s)	265
BshFI	GGCC	8 cut(s)	59, 137, 214, 264, 281, 372, 551, 822
BsiEI	CGRYCG	1 cut(s)	265
BsiHKCI	CYCGRG	1 cut(s)	534
BsiSI	CCGG	4 cut(s)	53, 265, 373, 1617
BslFI	GGGAC	2 cut(s)	673, 1634
BslI	CCNNNNNNNGG	3 cut(s)	379, 1346, 1588
BsmAI	GTCTC	4 cut(s)	396, 511, 746, 934
BsmBI	CGTCTC	1 cut(s)	934
BsmFI	GGGAC	2 cut(s)	673, 1634
BsmI	GAATGC	1 cut(s)	1332
BsnI	GGCC	8 cut(s)	59, 137, 214, 264, 281, 372, 551, 822
Bso31I	GGTCTC	2 cut(s)	396, 746
BsoBI	CYCGRG	1 cut(s)	534
Bsp119I	TTCGAA	1 cut(s)	627
Bsp1407I	TGTACA	1 cut(s)	947
Bsp143I	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
Bsp19I	CCATGG	2 cut(s)	717, 1582
BspACI	CCGC	6 cut(s)	56, 224, 261, 335, 345, 1417
BspANI	GGCC	8 cut(s)	59, 137, 214, 264, 281, 372, 551, 822
BspCNI	CTCAG	3 cut(s)	378, 474, 547
BspFNI	CGCG	1 cut(s)	335
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	2 cut(s)	875, 1096
BspMAI	CTGCAG	1 cut(s)	300
BspMI	ACCTGC	1 cut(s)	128
BspPI	GGATC	6 cut(s)	51, 390, 484, 771, 1002, 1434
BspQI	GCTCTTC	1 cut(s)	1225
BspT104I	TTCGAA	1 cut(s)	627
BspTI	CTTAAG	1 cut(s)	1126
BspTNI	GGTCTC	2 cut(s)	396, 746
BsrDI	GCAATG	1 cut(s)	1743
BsrFI	RCCGGY	3 cut(s)	52, 264, 372
BsrGI	TGTACA	1 cut(s)	947
BssAI	RCCGGY	3 cut(s)	52, 264, 372
BssECI	CCNNGG	8 cut(s)	233, 717, 1030, 1133, 1452, 1490, 1582, 1617
BssMI	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
BssSI	CACGAG	1 cut(s)	311
BssT1I	CCWWGG	5 cut(s)	233, 717, 1030, 1133, 1582
Bst2BI	CACGAG	1 cut(s)	311
Bst2UI	CCWGG	2 cut(s)	41, 878
Bst4CI	ACNGT	9 cut(s)	28, 127, 639, 945, 1439, 1456, 1537, 1563, 1668
Bst6I	CTCTTC	3 cut(s)	893, 1225, 1698
BstAFI	CTTAAG	1 cut(s)	1126
BstAUI	TGTACA	1 cut(s)	947
BstBI	TTCGAA	1 cut(s)	627
BstC8I	GCNNGC	6 cut(s)	54, 139, 266, 323, 429, 1415
BstDEI	CTNAG	5 cut(s)	386, 461, 555, 614, 1496
BstDSI	CCRYGG	3 cut(s)	717, 1452, 1582
BstF5I	GGATG	5 cut(s)	150, 162, 282, 1096, 1660
BstFNI	CGCG	1 cut(s)	335
BstHHI	GCGC	3 cut(s)	143, 193, 335
BstKTI	GATC	8 cut(s)	46, 366, 385, 492, 766, 997, 1111, 1429
BstMAI	GTCTC	4 cut(s)	396, 511, 746, 934
BstMBI	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
BstMCI	CGRYCG	1 cut(s)	265
BstMWI	GCNNNNNNNGC	5 cut(s)	65, 220, 307, 322, 1049
BstNI	CCWGG	2 cut(s)	41, 878
BstNSI	RCATGY	2 cut(s)	325, 1574
BstSCI	CCNGG	3 cut(s)	39, 876, 1616
BstSFI	CTRYAG	2 cut(s)	296, 1359
BstUI	CGCG	1 cut(s)	335
BstV1I	GCAGC	5 cut(s)	36, 282, 310, 504, 1160
BstV2I	GAAGAC	3 cut(s)	121, 248, 1082
BstX2I	RGATCY	4 cut(s)	382, 763, 994, 1426
BstXI	CCANNNNNNTGG	2 cut(s)	31, 234
BstYI	RGATCY	4 cut(s)	382, 763, 994, 1426
BstZI	CGGCCG	1 cut(s)	262
BsuI	GTATCC	1 cut(s)	1606
BsuRI	GGCC	8 cut(s)	59, 137, 214, 264, 281, 372, 551, 822
BtgI	CCRYGG	3 cut(s)	717, 1452, 1582
BtgZI	GCGATG	1 cut(s)	1713
BtrI	CACGTC	1 cut(s)	91
BtsCI	GGATG	5 cut(s)	150, 162, 282, 1096, 1660
BtsI	GCAGTG	1 cut(s)	1613
BtsIMutI	CAGTG	4 cut(s)	469, 1111, 1613, 1673
BveI	ACCTGC	1 cut(s)	128
Cac8I	GCNNGC	6 cut(s)	54, 139, 266, 323, 429, 1415
CaiI	CAGNNNCTG	2 cut(s)	292, 413
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	3 cut(s)	143, 193, 335
Cfr10I	RCCGGY	3 cut(s)	52, 264, 372
Cfr13I	GGNCC	2 cut(s)	58, 1246
CseI	GACGC	1 cut(s)	509
Csp6I	GTAC	2 cut(s)	726, 948
CviQI	GTAC	2 cut(s)	726, 948
DdeI	CTNAG	5 cut(s)	386, 461, 555, 614, 1496
DpnI	GATC	8 cut(s)	45, 365, 384, 491, 765, 996, 1110, 1428
DpnII	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
EaeI	YGGCCR	2 cut(s)	262, 279
EagI	CGGCCG	1 cut(s)	262
Eam1104I	CTCTTC	3 cut(s)	893, 1225, 1698
EarI	CTCTTC	3 cut(s)	893, 1225, 1698
EclXI	CGGCCG	1 cut(s)	262
Eco130I	CCWWGG	5 cut(s)	233, 717, 1030, 1133, 1582
Eco147I	AGGCCT	2 cut(s)	137, 214
Eco31I	GGTCTC	2 cut(s)	396, 746
Eco32I	GATATC	1 cut(s)	1102
Eco47I	GGWCC	1 cut(s)	1246
Eco52I	CGGCCG	1 cut(s)	262
Eco57I	CTGAAG	2 cut(s)	260, 1493
Eco88I	CYCGRG	1 cut(s)	534
EcoRII	CCWGG	2 cut(s)	39, 876
EcoRV	GATATC	1 cut(s)	1102
EcoT14I	CCWWGG	5 cut(s)	233, 717, 1030, 1133, 1582
EcoT22I	ATGCAT	2 cut(s)	1199, 1638
ErhI	CCWWGG	5 cut(s)	233, 717, 1030, 1133, 1582
Esp3I	CGTCTC	1 cut(s)	934
FaqI	GGGAC	2 cut(s)	673, 1634
FauNDI	CATATG	1 cut(s)	1632
FblI	GTMKAC	3 cut(s)	699, 1386, 1558
Fnu4HI	GCNGC	9 cut(s)	50, 57, 224, 262, 296, 299, 346, 518, 1174
FokI	GGATG	5 cut(s)	137, 149, 269, 1103, 1667
Fsp4HI	GCNGC	9 cut(s)	50, 57, 224, 262, 296, 299, 346, 518, 1174
GlaI	GCGC	3 cut(s)	142, 192, 334
GluI	GCNGC	9 cut(s)	50, 57, 224, 262, 296, 299, 346, 518, 1174
GsaI	CCCAGC	1 cut(s)	1598
HaeIII	GGCC	8 cut(s)	59, 137, 214, 264, 281, 372, 551, 822
HapII	CCGG	4 cut(s)	53, 265, 373, 1617
HgaI	GACGC	1 cut(s)	509
HhaI	GCGC	3 cut(s)	143, 193, 335
Hin6I	GCGC	3 cut(s)	141, 191, 333
HinP1I	GCGC	3 cut(s)	141, 191, 333
HincII	GTYRAC	1 cut(s)	700
HindII	GTYRAC	1 cut(s)	700
HinfI	GANTC	4 cut(s)	275, 289, 1264, 1306
HpaII	CCGG	4 cut(s)	53, 265, 373, 1617
HphI	GGTGA	6 cut(s)	265, 613, 736, 1361, 1598, 1694
Hpy166II	GTNNAC	7 cut(s)	256, 700, 948, 950, 1148, 1387, 1559
Hpy188III	TCNNGA	8 cut(s)	76, 286, 493, 524, 572, 770, 1007, 1676
Hpy8I	GTNNAC	7 cut(s)	256, 700, 948, 950, 1148, 1387, 1559
Hpy99I	CGWCG	3 cut(s)	92, 113, 275
HpyAV	CCTTC	9 cut(s)	169, 181, 185, 204, 244, 312, 669, 833, 1673
HpyCH4III	ACNGT	9 cut(s)	28, 127, 639, 945, 1439, 1456, 1537, 1563, 1668
HpyCH4IV	ACGT	3 cut(s)	90, 585, 930
HpyF10VI	GCNNNNNNNGC	5 cut(s)	65, 220, 307, 322, 1049
HpyF3I	CTNAG	5 cut(s)	386, 461, 555, 614, 1496
HpySE526I	ACGT	3 cut(s)	90, 585, 930
HspAI	GCGC	3 cut(s)	141, 191, 333
KroI	GCCGGC	2 cut(s)	52, 264
KroNI	GCCGGC	2 cut(s)	54, 266
Kzo9I	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
LguI	GCTCTTC	1 cut(s)	1225
LmnI	GCTCC	4 cut(s)	110, 873, 1100, 1591
Lsp1109I	GCAGC	5 cut(s)	36, 282, 310, 504, 1160
LweI	GCATC	4 cut(s)	703, 763, 1206, 1531
MaeII	ACGT	3 cut(s)	90, 585, 930
MaeIII	GTNAC	7 cut(s)	456, 601, 796, 970, 1349, 1510, 1682
MalI	GATC	8 cut(s)	45, 365, 384, 491, 765, 996, 1110, 1428
MboI	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
MfeI	CAATTG	2 cut(s)	328, 827
MflI	RGATCY	4 cut(s)	382, 763, 994, 1426
MmeI	TCCRAC	1 cut(s)	1404
Mph1103I	ATGCAT	2 cut(s)	1199, 1638
MroNI	GCCGGC	2 cut(s)	52, 264
MseI	TTAA	4 cut(s)	923, 956, 1127, 1434
MslI	CAYNNNNRTG	4 cut(s)	29, 1465, 1635, 1641
MspA1I	CMGCKG	1 cut(s)	49
MspCI	CTTAAG	1 cut(s)	1126
MspI	CCGG	4 cut(s)	53, 265, 373, 1617
MspR9I	CCNGG	3 cut(s)	41, 878, 1618
MunI	CAATTG	2 cut(s)	328, 827
Mva1269I	GAATGC	1 cut(s)	1332
MvaI	CCWGG	2 cut(s)	41, 878
MvnI	CGCG	1 cut(s)	335
MwoI	GCNNNNNNNGC	5 cut(s)	65, 220, 307, 322, 1049
NaeI	GCCGGC	2 cut(s)	54, 266
NciI	CCSGG	1 cut(s)	1618
NcoI	CCATGG	2 cut(s)	717, 1582
NdeI	CATATG	1 cut(s)	1632
NdeII	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
NgoMIV	GCCGGC	2 cut(s)	52, 264
NlaIV	GGNNCC	2 cut(s)	875, 1096
NmuCI	GTSAC	4 cut(s)	601, 970, 1349, 1682
NsiI	ATGCAT	2 cut(s)	1199, 1638
NspI	RCATGY	2 cut(s)	325, 1574
NspV	TTCGAA	1 cut(s)	627
PaeI	GCATGC	1 cut(s)	325
PaeR7I	CTCGAG	1 cut(s)	534
PagI	TCATGA	1 cut(s)	523
PaqCI	CACCTGC	1 cut(s)	128
PceI	AGGCCT	2 cut(s)	137, 214
PciSI	GCTCTTC	1 cut(s)	1225
PctI	GAATGC	1 cut(s)	1332
PdiI	GCCGGC	2 cut(s)	54, 266
PfeI	GAWTC	4 cut(s)	275, 289, 1264, 1306
PkrI	GCNGC	9 cut(s)	51, 58, 225, 263, 297, 300, 347, 519, 1175
PsiI	TTATAA	1 cut(s)	1142
Psp6I	CCWGG	2 cut(s)	39, 876
PspFI	CCCAGC	1 cut(s)	1594
PspGI	CCWGG	2 cut(s)	39, 876
PspN4I	GGNNCC	2 cut(s)	875, 1096
PspPI	GGNCC	2 cut(s)	58, 1246
PspXI	VCTCGAGB	1 cut(s)	534
PstI	CTGCAG	1 cut(s)	300
PstNI	CAGNNNCTG	2 cut(s)	292, 413
PsuI	RGATCY	4 cut(s)	382, 763, 994, 1426
PvuII	CAGCTG	1 cut(s)	49
RsaI	GTAC	2 cut(s)	727, 949
RsaNI	GTAC	2 cut(s)	726, 948
RseI	CAYNNNNRTG	4 cut(s)	29, 1465, 1635, 1641
SalI	GTCGAC	1 cut(s)	698
SapI	GCTCTTC	1 cut(s)	1225
SaqAI	TTAA	4 cut(s)	923, 956, 1127, 1434
SatI	GCNGC	9 cut(s)	50, 57, 224, 262, 296, 299, 346, 518, 1174
Sau3AI	GATC	8 cut(s)	43, 363, 382, 489, 763, 994, 1108, 1426
Sau96I	GGNCC	2 cut(s)	58, 1246
ScrFI	CCNGG	3 cut(s)	41, 878, 1618
SfaNI	GCATC	4 cut(s)	703, 763, 1206, 1531
SfcI	CTRYAG	2 cut(s)	296, 1359
Sfr274I	CTCGAG	1 cut(s)	534
SfuI	TTCGAA	1 cut(s)	627
SinI	GGWCC	1 cut(s)	1246
SlaI	CTCGAG	1 cut(s)	534
SmiMI	CAYNNNNRTG	4 cut(s)	29, 1465, 1635, 1641
SmlI	CTYRAG	4 cut(s)	534, 572, 937, 1126
SmoI	CTYRAG	4 cut(s)	534, 572, 937, 1126
SphI	GCATGC	1 cut(s)	325
SseBI	AGGCCT	2 cut(s)	137, 214
SsiI	CCGC	6 cut(s)	56, 224, 261, 335, 345, 1417
SspI	AATATT	1 cut(s)	676
StuI	AGGCCT	2 cut(s)	137, 214
StyD4I	CCNGG	3 cut(s)	39, 876, 1616
StyI	CCWWGG	5 cut(s)	233, 717, 1030, 1133, 1582
TaaI	ACNGT	9 cut(s)	28, 127, 639, 945, 1439, 1456, 1537, 1563, 1668
TaiI	ACGT	3 cut(s)	93, 588, 933
TaqI	TCGA	7 cut(s)	87, 183, 270, 535, 627, 699, 769
TatI	WGTACW	1 cut(s)	947
TauI	GCSGC	4 cut(s)	59, 226, 264, 348
TfiI	GAWTC	4 cut(s)	275, 289, 1264, 1306
Tru1I	TTAA	4 cut(s)	923, 956, 1127, 1434
Tru9I	TTAA	4 cut(s)	923, 956, 1127, 1434
TscAI	CASTG	4 cut(s)	469, 1111, 1613, 1673
TseFI	GTSAC	4 cut(s)	601, 970, 1349, 1682
TseI	GCWGC	5 cut(s)	49, 295, 298, 517, 1173
Tsp45I	GTSAC	4 cut(s)	601, 970, 1349, 1682
TspDTI	ATGAA	9 cut(s)	151, 263, 425, 579, 668, 1053, 1055, 1619, 1716
TspGWI	ACGGA	2 cut(s)	97, 1299
TspRI	CASTG	4 cut(s)	469, 1111, 1613, 1673
Vha464I	CTTAAG	1 cut(s)	1126
VpaK11BI	GGWCC	1 cut(s)	1246
XapI	RAATTY	1 cut(s)	622
XceI	RCATGY	2 cut(s)	325, 1574
XhoI	CTCGAG	1 cut(s)	534
XmiI	GTMKAC	3 cut(s)	699, 1386, 1558
Zsp2I	ATGCAT	2 cut(s)	1199, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.