Rorug01G0015100

PCI domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002448
Physical Location & Seq
Forward (+)
2594048 .. 2597300
3253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0015100.1

Sequence Viewer

Length: 3096 bp
ATGATAACTTTGTTCTTCCATTTCTTCCTCTTCTTGATCACTCCCTGTGTTACTAACCTCATCCCTGCTGTTCACAGCAAGTGTATTGAAGCCCAGAAAGAATCATTGCTCAATTTCAAGAAAAGTCTTGTATTTGATTCTTCTTCTTCCTCCAAGCTCATAACATGGAATTCGAATACCGAATGCTGTACTTGGCTTGGTGTAACTTGCAGCACTAATGGGAGTGTTGTTGGACTTGACATCAGTAGCGAGTCCATCTCATGCAACATTGACAATTCCAGCAGTCTTTTCCAACTACAACATCTTCAGAGCCTCAATTTAGCCTATACCAACTTCAGTGGCTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCTGAATTTAAGTGGGGCTTATTTTCCTGGGCAAATTCCAATCGAGGTTGCACACTTAACGAGGCTGGTAATTCTTGATCTCTCTGATAATTCCTATCCCTTTTTTGCTGAGAACCCGAATTTGAGCATGCTAATTCAGAACCTCACGGAGCTTACAGAATTATATCTTGATCATATAAACCTATCAGCTGAGGGATCTCACTGGGGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGACCTTGTCCTATTGTGATCTTTCAGGCCCTATTCATGAATCATTTGCCAAGCTTGATTCTCTATCCACGTTAATATTGTCTGGAAACAATATCTCTGGTCCGGTTCCAAAATTCTTTGCGAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCCGCTTGTAACTTGTATGGAGCATTTCCCAAAGAGATATTCCAGGTACCTACACTACAGTCTGTTGACCTATCAGCTAATTCAGAGCTTCGTGGTTCCTTACCGGAATTTCTAAAGAATGGATCTCTCGAGTCCCTAGTTCTATCTGGGACTAAGTTTTCAGGAGTCTTGCCGGACTCTATTGGCAACGTTGAAATGCTGTCTAGGTTAGATCTTTCAGATTGCAATTTCACAGGGGCAGTCCCAAAGTCACTGGCAAACCTAACACAATTGGGGGTTTTGGCCTTGTCATCCAACAAGTTTTTTGGTTCCATTAATTATATTCAATGGGACAAACTCATCAAGCTTGAGCTTCTCGACTTGTCCAACAATTTTCTCTACAACAGTATTCCAGTGTCTCCCTTTTCTATTCCCTTGCTGCGGAGGTTAGTTCTTTCTGGAAATCACTTCTCTGGTCAGGTGCTTGAATTTTCTAATGTCTCTTCGTACTTGCTGTACGAACTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTATCTTTAATCTTCCAAGGCTTCAAGAGTTAAATCTTTCTTCAAACAACTTGAGTGATTTTCCTTTTTATGGCCTTCAGGAGTCGAGAAATCTTTCATTTCTTGATCTATCCCACAATAGCTTGTTGTTCAATCATAACGGTACCAACTCATCACACCCCTCCCTCCTTCAGATTCAGGCCTTGACGTTGGCTTCTAACAAGTTGAAAACATTCCCAAGTTTCCTAAAAAATCAATCTAGTTTAGCCTACTTGGACCTTTCAGATAACCAGATTCCAGGTCAGATACCCAATTGGATATGGGGGCTTCCTCTCAAAACTCTAGGTCTCTGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACTTGGTTCTACTTACAATCTGTTGGATATTGATCTTCACTCAAACCAGCTTCAGGGTCAAATACCATTGTTTATAAGGGGTAGTTATTTGGATTACTCAAGAAATAATTTCAGCTCTAGTATACCAACTGATATTGCTGATTTCATTTCTTCCACGACCTACCTTTCTCTTTCAAGCAATAACTTGTATGGGGAAATTCCAATATCAATATGCAATGCAAGTGGTATAGTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGGCTCAGACATCTTCGCTTAATGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCCGATACTTTTCTTCAAGGTTGTAATTTGCAAACTCTAGCTCTGAGCAGAAATCATATACAAGGTCGATTTCCAAAATCTCTATCCAATTGTTCAAGCTTAGAGGTTTTAGACCTTGAAATCAATCAAATAACAGATGTCTTTCCCTGCATGTTGAAGACCATATCCACCTTGCGTGTCCTTGTGTTGCGATCCAACAAATTTTATGGACCCATTGGGTGTCCTGAGACCAATGGCACCTGGCCGAAGCTTCAAATCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCAGGTACGTCATTGACAACATGGCAGGCAATGGTGGTTAATGAAGATAATTACCAAATTCCCCTCAGCTTTTGGTGGGGAGCAGGTGGTGGAAGTGGGCACTATATTAATTATCGAGATGTAGTAACAACTACAATCAAAGGTCTAGAGATGGATCTTGTATATCTTTTAACTATCTTCACTTCGATTGACTTCTCTGGTAACAAGTTCAGCGGAACAATACCCAAGGAAATGGGCCTACTGAGATCATTATATGTCCTCAATCTGTCCAGCAATGCTTTCACAGGTGAAATCCCATCATCCTTTGGTAACATGACAACCCTCGAGTCCTTAGACCTCTCACAAAACCACCTGAGCGGCCAAATTCCACCACAATTTGCAAATCTCACTTTCCTTTCGTACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAGCACTCAGTTATCGACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAACAATCGTATTGCCACCTCCAACGTCAAATAGAAGCTCAAGTAAGCCGACTTCTGGAGATGAGATTGAGTTGAATGTTCTCAGTGCTGACATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTCTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATTACAGAAGGCATTTCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0000956 GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006354 GO:0006366 GO:0006368 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008298 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016070 GO:0016071 GO:0016973 GO:0018130 GO:0019222 GO:0019438 GO:0019439 GO:0022622 GO:0023052 GO:0031503 GO:0032501 GO:0032502 GO:0032774 GO:0032870 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0035556 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048364 GO:0048519 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051276 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0060968 GO:0065007 GO:0070390 GO:0070727 GO:0070887 GO:0071025 GO:0071027 GO:0071028 GO:0071033 GO:0071166 GO:0071310 GO:0071369 GO:0071426 GO:0071427 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0090304 GO:0097159 GO:0097659 GO:0099402 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PCI

Protein Analysis

1031

Amino Acids

113.55

Weight (kDa)

5.61

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 284 4.7e-11 Leucine-rich repeat region
LRR_8 PF13855 426 - 484 3.4e-08 Leucine rich repeat
LRR_8 PF13855 686 - 745 2.5e-08 Leucine rich repeat
LRR_8 PF13855 857 - 917 1.7e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1766
AarI CACCTGC 1 cut(s) 2399
Acc36I ACCTGC 1 cut(s) 2399
Acc65I GGTACC 2 cut(s) 829, 1469
AccB1I GGYRCC 3 cut(s) 829, 1469, 2267
AccB7I CCANNNNNTGG 1 cut(s) 1969
AccBSI CCGCTC 1 cut(s) 2682
AccI GTMKAC 1 cut(s) 1813
AciI CCGC 4 cut(s) 786, 1204, 2538, 2682
AclI AACGTT 1 cut(s) 972
AclWI GGATC 8 cut(s) 589, 913, 1321, 2032, 2217, 2487, 2755, 2768
AcoI YGGCCR 2 cut(s) 2273, 2683
AcuI CTGAAG 5 cut(s) 290, 319, 1388, 1481, 1727
AfaI GTAC 8 cut(s) 190, 831, 1271, 1280, 1471, 2332, 2726, 3011
AfiI CCNNNNNNNGG 7 cut(s) 1203, 1397, 1694, 1744, 1969, 2903, 3055
AflIII ACRYGT 1 cut(s) 2951
AjnI CCWGG 5 cut(s) 412, 825, 1603, 2270, 2326
AjuI GAANNNNNNNTTGG 4 cut(s) 806, 838, 3051, 3083
Alw26I GTCTC 6 cut(s) 785, 1185, 1267, 1658, 2252, 2740
AlwI GGATC 8 cut(s) 589, 913, 1321, 2032, 2217, 2487, 2755, 2768
Ama87I CYCGRG 2 cut(s) 911, 2648
AoxI GGCC 9 cut(s) 592, 658, 1065, 1399, 1506, 2273, 2560, 2683, 2828
ApeKI GCWGC 2 cut(s) 210, 1201
AseI ATTAAT 2 cut(s) 1098, 2433
Asp700I GAANNNNTTC 2 cut(s) 1420, 1538
Asp718I GGTACC 2 cut(s) 829, 1469
AspS9I GGNCC 7 cut(s) 592, 659, 731, 1582, 2240, 2560, 2828
AsuHPI GGTGA 2 cut(s) 2330, 2624
AsuII TTCGAA 1 cut(s) 173
AvaI CYCGRG 2 cut(s) 911, 2648
AvaII GGWCC 3 cut(s) 731, 1582, 2240
BaeGI GKGCMC 1 cut(s) 2427
BamHI GGATCC 1 cut(s) 2760
BanI GGYRCC 3 cut(s) 829, 1469, 2267
BarI GAAGNNNNNNTAC 6 cut(s) 1302, 1334, 1674, 1706, 2884, 2916
BbsI GAAGAC 1 cut(s) 2195
BbvCI CCTCAGC 3 cut(s) 576, 2390, 3051
BbvI GCAGC 2 cut(s) 222, 1188
BccI CCATC 5 cut(s) 263, 361, 2470, 2629, 2991
BceAI ACGGC 1 cut(s) 2954
BciT130I CCWGG 5 cut(s) 414, 827, 1605, 2272, 2328
BciVI GTATCC 1 cut(s) 2839
BclI TGATCA 2 cut(s) 36, 556
BcoDI GTCTC 6 cut(s) 785, 1185, 1267, 1658, 2252, 2740
BfaI CTAG 8 cut(s) 920, 987, 1566, 1649, 1679, 1809, 2069, 2471
BfmI CTRYAG 2 cut(s) 839, 3013
BfuAI ACCTGC 1 cut(s) 2399
BfuI GTATCC 1 cut(s) 2839
BglII AGATCT 1 cut(s) 994
BisI GCNGC 3 cut(s) 211, 1202, 2683
BlsI GCNGC 3 cut(s) 212, 1203, 2684
Bme1390I CCNGG 5 cut(s) 414, 827, 1605, 2272, 2328
Bme18I GGWCC 3 cut(s) 731, 1582, 2240
BmeT110I CYCGRG 2 cut(s) 911, 2648
BmgT120I GGNCC 7 cut(s) 592, 659, 731, 1582, 2240, 2560, 2828
BmrFI CCNGG 5 cut(s) 414, 827, 1605, 2272, 2328
BmrI ACTGGG 1 cut(s) 598
BmuI ACTGGG 1 cut(s) 598
BpiI GAAGAC 1 cut(s) 2195
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2925
Bpu10I CCTNAGC 4 cut(s) 576, 2390, 2678, 3051
Bpu14I TTCGAA 1 cut(s) 173
BpuEI CTTGAG 5 cut(s) 796, 1151, 1399, 1774, 2872
BsaBI GATNNNNATC 1 cut(s) 1722
BsaI GGTCTC 2 cut(s) 1658, 2252
BsaJI CCNNGG 3 cut(s) 413, 1343, 2550
BsaWI WCCGGW 2 cut(s) 733, 886
Bsc4I CCNNNNNNNGG 7 cut(s) 1203, 1397, 1694, 1744, 1969, 2903, 3055
Bse1I ACTGG 4 cut(s) 593, 1041, 1175, 2026
Bse3DI GCAATG 4 cut(s) 104, 1912, 2361, 2605
Bse8I GATNNNNATC 1 cut(s) 1722
BseBI CCWGG 5 cut(s) 414, 827, 1605, 2272, 2328
BseDI CCNNGG 3 cut(s) 413, 1343, 2550
BseGI GGATG 4 cut(s) 60, 1073, 2624, 3030
BseJI GATNNNNATC 1 cut(s) 1722
BseLI CCNNNNNNNGG 7 cut(s) 1203, 1397, 1694, 1744, 1969, 2903, 3055
BseMI GCAATG 4 cut(s) 104, 1912, 2361, 2605
BseNI ACTGG 4 cut(s) 593, 1041, 1175, 2026
BseRI GAGGAG 2 cut(s) 2020, 2823
BseSI GKGCMC 1 cut(s) 2427
BseXI GCAGC 2 cut(s) 222, 1188
BshFI GGCC 9 cut(s) 594, 660, 1067, 1401, 1508, 2275, 2562, 2685, 2830
BshNI GGYRCC 3 cut(s) 829, 1469, 2267
BsiHKCI CYCGRG 2 cut(s) 911, 2648
BsiSI CCGG 3 cut(s) 734, 887, 956
BslFI GGGAC 4 cut(s) 901, 946, 1010, 1127
BslI CCNNNNNNNGG 7 cut(s) 1203, 1397, 1694, 1744, 1969, 2903, 3055
BsmAI GTCTC 6 cut(s) 785, 1185, 1267, 1658, 2252, 2740
BsmFI GGGAC 4 cut(s) 901, 946, 1010, 1127
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 9 cut(s) 594, 660, 1067, 1401, 1508, 2275, 2562, 2685, 2830
Bso31I GGTCTC 2 cut(s) 1658, 2252
BsoBI CYCGRG 2 cut(s) 911, 2648
Bsp119I TTCGAA 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 2427
BspACI CCGC 4 cut(s) 786, 1204, 2538, 2682
BspANI GGCC 9 cut(s) 594, 660, 1067, 1401, 1508, 2275, 2562, 2685, 2830
BspHI TCATGA 1 cut(s) 667
BspMI ACCTGC 1 cut(s) 2399
BspPI GGATC 8 cut(s) 589, 913, 1321, 2032, 2217, 2487, 2755, 2768
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 173
BspT107I GGYRCC 3 cut(s) 829, 1469, 2267
BspTNI GGTCTC 2 cut(s) 1658, 2252
BsrBI CCGCTC 1 cut(s) 2682
BsrDI GCAATG 4 cut(s) 104, 1912, 2361, 2605
BsrI ACTGG 4 cut(s) 593, 1041, 1175, 2026
BssECI CCNNGG 3 cut(s) 413, 1343, 2550
BssNAI GTATAC 1 cut(s) 1814
BssT1I CCWWGG 2 cut(s) 1343, 2550
Bst1107I GTATAC 1 cut(s) 1814
Bst2UI CCWGG 5 cut(s) 414, 827, 1605, 2272, 2328
Bst4CI ACNGT 4 cut(s) 843, 1169, 1469, 2309
Bst6I CTCTTC 3 cut(s) 35, 349, 1270
BstBI TTCGAA 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 515, 2352
BstF5I GGATG 4 cut(s) 60, 1073, 2624, 3030
BstMAI GTCTC 6 cut(s) 785, 1185, 1267, 1658, 2252, 2740
BstNI CCWGG 5 cut(s) 414, 827, 1605, 2272, 2328
BstNSI RCATGY 3 cut(s) 517, 2185, 2955
BstSCI CCNGG 5 cut(s) 412, 825, 1603, 2270, 2326
BstSFI CTRYAG 2 cut(s) 839, 3013
BstSLI GKGCMC 1 cut(s) 2427
BstV1I GCAGC 2 cut(s) 222, 1188
BstV2I GAAGAC 1 cut(s) 2195
BstX2I RGATCY 6 cut(s) 581, 905, 994, 2024, 2479, 2760
BstXI CCANNNNNNTGG 1 cut(s) 2557
BstYI RGATCY 6 cut(s) 581, 905, 994, 2024, 2479, 2760
BstZ17I GTATAC 1 cut(s) 1814
BsuI GTATCC 1 cut(s) 2839
BsuRI GGCC 9 cut(s) 594, 660, 1067, 1401, 1508, 2275, 2562, 2685, 2830
BtsCI GGATG 4 cut(s) 60, 1073, 2624, 3030
BtsIMutI CAGTG 5 cut(s) 343, 586, 1034, 1182, 2938
BveI ACCTGC 1 cut(s) 2399
Cac8I GCNNGC 2 cut(s) 515, 2352
CciI TCATGA 1 cut(s) 667
Cfr13I GGNCC 7 cut(s) 592, 659, 731, 1582, 2240, 2560, 2828
CsiI ACCWGGT 1 cut(s) 2326
Csp6I GTAC 8 cut(s) 189, 830, 1270, 1279, 1470, 2331, 2725, 3010
CspCI CAANNNNNGTGG 4 cut(s) 319, 354, 1894, 1929
CviAII CATG 8 cut(s) 165, 261, 514, 668, 2182, 2346, 2638, 2952
CviQI GTAC 8 cut(s) 189, 830, 1270, 1279, 1470, 2331, 2725, 3010
EaeI YGGCCR 2 cut(s) 2273, 2683
Eam1104I CTCTTC 3 cut(s) 35, 349, 1270
EarI CTCTTC 3 cut(s) 35, 349, 1270
Eco130I CCWWGG 2 cut(s) 1343, 2550
Eco147I AGGCCT 1 cut(s) 1508
Eco31I GGTCTC 2 cut(s) 1658, 2252
Eco47I GGWCC 3 cut(s) 731, 1582, 2240
Eco57I CTGAAG 5 cut(s) 290, 319, 1388, 1481, 1727
Eco88I CYCGRG 2 cut(s) 911, 2648
EcoO109I RGGNCCY 2 cut(s) 659, 2828
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 5 cut(s) 412, 825, 1603, 2270, 2326
EcoT14I CCWWGG 2 cut(s) 1343, 2550
ErhI CCWWGG 2 cut(s) 1343, 2550
FaeI CATG 8 cut(s) 168, 264, 517, 671, 2185, 2349, 2641, 2955
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FaqI GGGAC 4 cut(s) 901, 946, 1010, 1127
FatI CATG 8 cut(s) 164, 260, 513, 667, 2181, 2345, 2637, 2951
FbaI TGATCA 2 cut(s) 36, 556
FblI GTMKAC 1 cut(s) 1813
Fnu4HI GCNGC 3 cut(s) 211, 1202, 2683
FokI GGATG 4 cut(s) 47, 1060, 2611, 3017
Fsp4HI GCNGC 3 cut(s) 211, 1202, 2683
FspBI CTAG 8 cut(s) 920, 987, 1566, 1649, 1679, 1809, 2069, 2471
GluI GCNGC 3 cut(s) 211, 1202, 2683
GsuI CTGGAG 1 cut(s) 2925
HaeIII GGCC 9 cut(s) 594, 660, 1067, 1401, 1508, 2275, 2562, 2685, 2830
HapII CCGG 3 cut(s) 734, 887, 956
Hin1II CATG 8 cut(s) 168, 264, 517, 671, 2185, 2349, 2641, 2955
HincII GTYRAC 2 cut(s) 633, 850
HindII GTYRAC 2 cut(s) 633, 850
HindIII AAGCTT 6 cut(s) 368, 683, 763, 1127, 2128, 2279
HpaII CCGG 3 cut(s) 734, 887, 956
HphI GGTGA 2 cut(s) 2330, 2624
Hpy166II GTNNAC 4 cut(s) 73, 633, 850, 1814
Hpy8I GTNNAC 4 cut(s) 73, 633, 850, 1814
Hpy99I CGWCG 1 cut(s) 2975
HpyAV CCTTC 6 cut(s) 1304, 1412, 1505, 2751, 2812, 3075
HpyCH4III ACNGT 4 cut(s) 843, 1169, 1469, 2309
HpyCH4IV ACGT 5 cut(s) 701, 972, 1514, 2333, 2873
HpySE526I ACGT 5 cut(s) 701, 972, 1514, 2333, 2873
Hsp92II CATG 8 cut(s) 168, 264, 517, 671, 2185, 2349, 2641, 2955
KpnI GGTACC 2 cut(s) 833, 1473
Ksp22I TGATCA 2 cut(s) 36, 556
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 4 cut(s) 535, 803, 1690, 2405
Lsp1109I GCAGC 2 cut(s) 222, 1188
MabI ACCWGGT 1 cut(s) 2326
MaeI CTAG 8 cut(s) 920, 987, 1566, 1649, 1679, 1809, 2069, 2471
MaeII ACGT 5 cut(s) 701, 972, 1514, 2333, 2873
MbiI CCGCTC 1 cut(s) 2682
MfeI CAATTG 3 cut(s) 1052, 1618, 2119
MflI RGATCY 6 cut(s) 581, 905, 994, 2024, 2479, 2760
MhlI GDGCHC 1 cut(s) 2427
MlyI GAGTC 7 cut(s) 260, 787, 923, 953, 957, 1418, 2660
MmeI TCCRAC 7 cut(s) 211, 316, 1101, 1173, 1695, 2250, 2894
MroXI GAANNNNTTC 2 cut(s) 1420, 1538
MspA1I CMGCKG 3 cut(s) 575, 2538, 3055
MspI CCGG 3 cut(s) 734, 887, 956
MspR9I CCNGG 5 cut(s) 414, 827, 1605, 2272, 2328
MunI CAATTG 3 cut(s) 1052, 1618, 2119
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 5 cut(s) 414, 827, 1605, 2272, 2328
NlaIII CATG 8 cut(s) 168, 264, 517, 671, 2185, 2349, 2641, 2955
NmuCI GTSAC 2 cut(s) 1032, 2976
NspI RCATGY 3 cut(s) 517, 2185, 2955
NspV TTCGAA 1 cut(s) 173
PaeI GCATGC 1 cut(s) 517
PaeR7I CTCGAG 2 cut(s) 911, 2648
PagI TCATGA 1 cut(s) 667
PaqCI CACCTGC 1 cut(s) 2399
PceI AGGCCT 1 cut(s) 1508
PciI ACATGT 1 cut(s) 2951
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 2 cut(s) 1420, 1538
PfeI GAWTC 7 cut(s) 101, 137, 671, 689, 1501, 1600, 1953
PflFI GACNNNGTC 1 cut(s) 637
PflMI CCANNNNNTGG 1 cut(s) 1969
PkrI GCNGC 3 cut(s) 212, 1203, 2684
PleI GAGTC 7 cut(s) 259, 786, 922, 953, 956, 1417, 2659
PpsI GAGTC 7 cut(s) 259, 786, 922, 953, 956, 1417, 2659
PscI ACATGT 1 cut(s) 2951
PshBI ATTAAT 2 cut(s) 1098, 2433
PsiI TTATAA 1 cut(s) 1766
Psp1406I AACGTT 1 cut(s) 972
Psp6I CCWGG 5 cut(s) 412, 825, 1603, 2270, 2326
PspGI CCWGG 5 cut(s) 412, 825, 1603, 2270, 2326
PspPI GGNCC 7 cut(s) 592, 659, 731, 1582, 2240, 2560, 2828
PspXI VCTCGAGB 1 cut(s) 2648
PsuI RGATCY 6 cut(s) 581, 905, 994, 2024, 2479, 2760
PsyI GACNNNGTC 1 cut(s) 637
PvuII CAGCTG 2 cut(s) 575, 3055
RsaI GTAC 8 cut(s) 190, 831, 1271, 1280, 1471, 2332, 2726, 3011
RsaNI GTAC 8 cut(s) 189, 830, 1270, 1279, 1470, 2331, 2725, 3010
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 3 cut(s) 211, 1202, 2683
Sau96I GGNCC 7 cut(s) 592, 659, 731, 1582, 2240, 2560, 2828
SchI GAGTC 7 cut(s) 260, 787, 923, 953, 957, 1418, 2660
ScrFI CCNGG 5 cut(s) 414, 827, 1605, 2272, 2328
SduI GDGCHC 1 cut(s) 2427
SexAI ACCWGGT 1 cut(s) 2326
SfcI CTRYAG 2 cut(s) 839, 3013
Sfr274I CTCGAG 2 cut(s) 911, 2648
SfuI TTCGAA 1 cut(s) 173
SinI GGWCC 3 cut(s) 731, 1582, 2240
SlaI CTCGAG 2 cut(s) 911, 2648
SmlI CTYRAG 7 cut(s) 775, 911, 1130, 1378, 1789, 2648, 2887
SmoI CTYRAG 7 cut(s) 775, 911, 1130, 1378, 1789, 2648, 2887
SphI GCATGC 1 cut(s) 517
SseBI AGGCCT 1 cut(s) 1508
SsiI CCGC 4 cut(s) 786, 1204, 2538, 2682
SspI AATATT 1 cut(s) 708
SspMI CTAG 8 cut(s) 920, 987, 1566, 1649, 1679, 1809, 2069, 2471
StuI AGGCCT 1 cut(s) 1508
StyD4I CCNGG 5 cut(s) 412, 825, 1603, 2270, 2326
StyI CCWWGG 2 cut(s) 1343, 2550
TaaI ACNGT 4 cut(s) 843, 1169, 1469, 2309
TaiI ACGT 5 cut(s) 704, 975, 1517, 2336, 2876
TatI WGTACW 1 cut(s) 188
TauI GCSGC 1 cut(s) 2685
TfiI GAWTC 7 cut(s) 101, 137, 671, 689, 1501, 1600, 1953
TscAI CASTG 5 cut(s) 343, 593, 1041, 1182, 2938
TseFI GTSAC 2 cut(s) 1032, 2976
TseI GCWGC 2 cut(s) 210, 1201
Tsp45I GTSAC 2 cut(s) 1032, 2976
TspDTI ATGAA 5 cut(s) 656, 684, 1413, 1825, 2382
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 5 cut(s) 343, 593, 1041, 1182, 2938
Tth111I GACNNNGTC 1 cut(s) 637
Van91I CCANNNNNTGG 1 cut(s) 1969
VpaK11BI GGWCC 3 cut(s) 731, 1582, 2240
VspI ATTAAT 2 cut(s) 1098, 2433
XbaI TCTAGA 2 cut(s) 1678, 2470
XceI RCATGY 3 cut(s) 517, 2185, 2955
XhoI CTCGAG 2 cut(s) 911, 2648
XmiI GTMKAC 1 cut(s) 1813
XmnI GAANNNNTTC 2 cut(s) 1420, 1538
XspI CTAG 8 cut(s) 920, 987, 1566, 1649, 1679, 1809, 2069, 2471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.