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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52170 AT3G52170 AT3G52170 AT3G52170 |
| fragaria_vesca | FvH4_7g06800 FvH4_7g06800 FvH4_7g06800 |
| malus_domestica | MD02G1237300.v1.1 MD02G1241700.v1.1 MD07G1075000.v1.1 |
| prunus_persica | Prupe.2G095200_v2.0.a1 |
| pyrus_communis | pycom02g20790 pycom07g05890 |
| rosa_chinensis | RchiOBHm_Chr1g0336511 |
| rosa_laevigata | RLG00000029358 |
| rosa_multiflora | Rmu_sc0001981.1_g000012 Rmu_sc0009546.1_g000019 |
| rosa_roxburghii | Rroxscaffold_4G00315540 |
| rosa_rugosa | Rorug01G0125600 Rorug01G0125700 Rorug01G0125800.1 |
| rosa_samantha | Rh1AG146700 Rh1BG114900 Rh1CG138100 Rh1DG153400 |
| rosa_wichuraiana | Rw1G011900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1410 |
| AccB1I | GGYRCC | 4 cut(s) | 405, 472, 617, 1629 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1672 |
| AccI | GTMKAC | 3 cut(s) | 164, 267, 744 |
| AccII | CGCG | 1 cut(s) | 1065 |
| AciI | CCGC | 2 cut(s) | 142, 839 |
| AclI | AACGTT | 1 cut(s) | 1251 |
| AclWI | GGATC | 1 cut(s) | 1326 |
| AcsI | RAATTY | 8 cut(s) | 21, 200, 374, 1106, 1221, 1281, 1390, 1687 |
| AdeI | CACNNNGTG | 1 cut(s) | 1636 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 527, 1564, 1672 |
| AhlI | ACTAGT | 1 cut(s) | 1657 |
| AjiI | CACGTC | 1 cut(s) | 133 |
| AjnI | CCWGG | 1 cut(s) | 1385 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 814, 846 |
| AluBI | AGCT | 4 cut(s) | 8, 422, 537, 812 |
| AluI | AGCT | 4 cut(s) | 8, 422, 537, 812 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| AlwI | GGATC | 1 cut(s) | 1326 |
| ApeKI | GCWGC | 2 cut(s) | 181, 422 |
| ApoI | RAATTY | 8 cut(s) | 21, 200, 374, 1106, 1221, 1281, 1390, 1687 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 916 |
| AspLEI | GCGC | 3 cut(s) | 1049, 1067, 1097 |
| AspS9I | GGNCC | 1 cut(s) | 1639 |
| AsuC2I | CCSGG | 2 cut(s) | 122, 1634 |
| AsuHPI | GGTGA | 1 cut(s) | 893 |
| AsuII | TTCGAA | 1 cut(s) | 291 |
| AvaII | GGWCC | 1 cut(s) | 1639 |
| BanI | GGYRCC | 4 cut(s) | 405, 472, 617, 1629 |
| BbsI | GAAGAC | 1 cut(s) | 727 |
| BbvCI | CCTCAGC | 1 cut(s) | 1117 |
| BbvI | GCAGC | 2 cut(s) | 193, 409 |
| BccI | CCATC | 4 cut(s) | 237, 529, 1046, 1654 |
| BceAI | ACGGC | 1 cut(s) | 763 |
| BciT130I | CCWGG | 1 cut(s) | 1387 |
| BciVI | GTATCC | 3 cut(s) | 1019, 1355, 1631 |
| BcnI | CCSGG | 2 cut(s) | 122, 1634 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BcuI | ACTAGT | 1 cut(s) | 1657 |
| BfaI | CTAG | 9 cut(s) | 9, 194, 252, 1160, 1347, 1532, 1581, 1658, 1758 |
| BfmI | CTRYAG | 6 cut(s) | 165, 427, 684, 1170, 1423, 1719 |
| BfuI | GTATCC | 3 cut(s) | 1019, 1355, 1631 |
| BglII | AGATCT | 1 cut(s) | 438 |
| BisI | GCNGC | 2 cut(s) | 182, 423 |
| BlsI | GCNGC | 2 cut(s) | 183, 424 |
| Bme1390I | CCNGG | 3 cut(s) | 122, 1387, 1634 |
| Bme18I | GGWCC | 1 cut(s) | 1639 |
| BmgBI | CACGTC | 1 cut(s) | 133 |
| BmgT120I | GGNCC | 1 cut(s) | 1639 |
| BmiI | GGNNCC | 5 cut(s) | 407, 474, 619, 889, 1631 |
| BmrFI | CCNGG | 3 cut(s) | 122, 1387, 1634 |
| BmsI | GCATC | 4 cut(s) | 86, 246, 1199, 1567 |
| BpiI | GAAGAC | 1 cut(s) | 727 |
| BpmI | CTGGAG | 2 cut(s) | 1369, 1474 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1117 |
| Bpu14I | TTCGAA | 1 cut(s) | 291 |
| BpuEI | CTTGAG | 3 cut(s) | 800, 1466, 1793 |
| BpuMI | CCSGG | 2 cut(s) | 122, 1634 |
| BsaJI | CCNNGG | 3 cut(s) | 120, 1204, 1314 |
| BsaWI | WCCGGW | 2 cut(s) | 402, 1372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1533, 1563 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 527, 1564, 1672 |
| Bse1I | ACTGG | 2 cut(s) | 160, 1491 |
| Bse3DI | GCAATG | 2 cut(s) | 619, 1365 |
| BseBI | CCWGG | 1 cut(s) | 1387 |
| BseDI | CCNNGG | 3 cut(s) | 120, 1204, 1314 |
| BseGI | GGATG | 3 cut(s) | 521, 1214, 1646 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 527, 1564, 1672 |
| BseMI | GCAATG | 2 cut(s) | 619, 1365 |
| BseMII | CTCAG | 4 cut(s) | 160, 339, 432, 1131 |
| BseNI | ACTGG | 2 cut(s) | 160, 1491 |
| BseRI | GAGGAG | 2 cut(s) | 1554, 1580 |
| BseXI | GCAGC | 2 cut(s) | 193, 409 |
| BseYI | CCCAGC | 1 cut(s) | 750 |
| BsgI | GTGCAG | 1 cut(s) | 1497 |
| Bsh1236I | CGCG | 1 cut(s) | 1065 |
| BshNI | GGYRCC | 4 cut(s) | 405, 472, 617, 1629 |
| BsiSI | CCGG | 4 cut(s) | 122, 403, 1373, 1634 |
| BslFI | GGGAC | 3 cut(s) | 119, 980, 1366 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 527, 1564, 1672 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| BsmBI | CGTCTC | 1 cut(s) | 328 |
| BsmFI | GGGAC | 3 cut(s) | 119, 980, 1366 |
| BsmI | GAATGC | 1 cut(s) | 56 |
| Bsp119I | TTCGAA | 1 cut(s) | 291 |
| Bsp1407I | TGTACA | 2 cut(s) | 491, 569 |
| Bsp143I | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| BspACI | CCGC | 2 cut(s) | 142, 839 |
| BspCNI | CTCAG | 4 cut(s) | 159, 338, 431, 1130 |
| BspFNI | CGCG | 1 cut(s) | 1065 |
| BspHI | TCATGA | 1 cut(s) | 154 |
| BspLI | GGNNCC | 5 cut(s) | 407, 474, 619, 889, 1631 |
| BspPI | GGATC | 1 cut(s) | 1326 |
| BspT104I | TTCGAA | 1 cut(s) | 291 |
| BspT107I | GGYRCC | 4 cut(s) | 405, 472, 617, 1629 |
| BsrDI | GCAATG | 2 cut(s) | 619, 1365 |
| BsrGI | TGTACA | 2 cut(s) | 491, 569 |
| BsrI | ACTGG | 2 cut(s) | 160, 1491 |
| BssECI | CCNNGG | 3 cut(s) | 120, 1204, 1314 |
| BssMI | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| BssT1I | CCWWGG | 2 cut(s) | 1204, 1314 |
| Bst2UI | CCWGG | 1 cut(s) | 1387 |
| Bst4CI | ACNGT | 7 cut(s) | 169, 477, 486, 530, 694, 901, 1643 |
| Bst6I | CTCTTC | 2 cut(s) | 969, 1675 |
| BstAUI | TGTACA | 2 cut(s) | 491, 569 |
| BstBI | TTCGAA | 1 cut(s) | 291 |
| BstC8I | GCNNGC | 1 cut(s) | 91 |
| BstDEI | CTNAG | 7 cut(s) | 146, 325, 340, 410, 418, 656, 1117 |
| BstF5I | GGATG | 3 cut(s) | 521, 1214, 1646 |
| BstFNI | CGCG | 1 cut(s) | 1065 |
| BstHHI | GCGC | 3 cut(s) | 1049, 1067, 1097 |
| BstKTI | GATC | 6 cut(s) | 441, 879, 1216, 1321, 1483, 1726 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMBI | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1038, 1586 |
| BstNI | CCWGG | 1 cut(s) | 1387 |
| BstSCI | CCNGG | 3 cut(s) | 120, 1385, 1632 |
| BstSFI | CTRYAG | 6 cut(s) | 165, 427, 684, 1170, 1423, 1719 |
| BstUI | CGCG | 1 cut(s) | 1065 |
| BstV1I | GCAGC | 2 cut(s) | 193, 409 |
| BstV2I | GAAGAC | 1 cut(s) | 727 |
| BstX2I | RGATCY | 1 cut(s) | 438 |
| BstYI | RGATCY | 1 cut(s) | 438 |
| BsuI | GTATCC | 3 cut(s) | 1019, 1355, 1631 |
| BtrI | CACGTC | 1 cut(s) | 133 |
| BtsCI | GGATG | 3 cut(s) | 521, 1214, 1646 |
| BtsIMutI | CAGTG | 1 cut(s) | 699 |
| Cac8I | GCNNGC | 1 cut(s) | 91 |
| CciI | TCATGA | 1 cut(s) | 154 |
| CfoI | GCGC | 3 cut(s) | 1049, 1067, 1097 |
| Cfr13I | GGNCC | 1 cut(s) | 1639 |
| CseI | GACGC | 2 cut(s) | 1071, 1770 |
| CviAII | CATG | 7 cut(s) | 52, 103, 155, 390, 1016, 1103, 1651 |
| DdeI | CTNAG | 7 cut(s) | 146, 325, 340, 410, 418, 656, 1117 |
| DpnI | GATC | 6 cut(s) | 440, 878, 1215, 1320, 1482, 1725 |
| DpnII | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| DraIII | CACNNNGTG | 1 cut(s) | 1636 |
| Eam1104I | CTCTTC | 2 cut(s) | 969, 1675 |
| EarI | CTCTTC | 2 cut(s) | 969, 1675 |
| EciI | GGCGGA | 1 cut(s) | 131 |
| Eco130I | CCWWGG | 2 cut(s) | 1204, 1314 |
| Eco32I | GATATC | 2 cut(s) | 152, 757 |
| Eco47I | GGWCC | 1 cut(s) | 1639 |
| EcoRI | GAATTC | 2 cut(s) | 1106, 1221 |
| EcoRII | CCWGG | 1 cut(s) | 1385 |
| EcoRV | GATATC | 2 cut(s) | 152, 757 |
| EcoT14I | CCWWGG | 2 cut(s) | 1204, 1314 |
| ErhI | CCWWGG | 2 cut(s) | 1204, 1314 |
| Esp3I | CGTCTC | 1 cut(s) | 328 |
| FaeI | CATG | 7 cut(s) | 55, 106, 158, 393, 1019, 1106, 1654 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 900, 932 |
| FaqI | GGGAC | 3 cut(s) | 119, 980, 1366 |
| FatI | CATG | 7 cut(s) | 51, 102, 154, 389, 1015, 1102, 1650 |
| FauNDI | CATATG | 1 cut(s) | 1738 |
| FblI | GTMKAC | 3 cut(s) | 164, 267, 744 |
| Fnu4HI | GCNGC | 2 cut(s) | 182, 423 |
| FokI | GGATG | 3 cut(s) | 508, 1221, 1633 |
| Fsp4HI | GCNGC | 2 cut(s) | 182, 423 |
| FspBI | CTAG | 9 cut(s) | 9, 194, 252, 1160, 1347, 1532, 1581, 1658, 1758 |
| GlaI | GCGC | 3 cut(s) | 1048, 1066, 1096 |
| GluI | GCNGC | 2 cut(s) | 182, 423 |
| GsaI | CCCAGC | 1 cut(s) | 754 |
| GsuI | CTGGAG | 2 cut(s) | 1369, 1474 |
| HapII | CCGG | 4 cut(s) | 122, 403, 1373, 1634 |
| HgaI | GACGC | 2 cut(s) | 1071, 1770 |
| HhaI | GCGC | 3 cut(s) | 1049, 1067, 1097 |
| Hin1II | CATG | 7 cut(s) | 55, 106, 158, 393, 1019, 1106, 1654 |
| Hin6I | GCGC | 3 cut(s) | 1047, 1065, 1095 |
| HinP1I | GCGC | 3 cut(s) | 1047, 1065, 1095 |
| HincII | GTYRAC | 2 cut(s) | 268, 558 |
| HindII | GTYRAC | 2 cut(s) | 268, 558 |
| HinfI | GANTC | 6 cut(s) | 98, 603, 709, 1273, 1487, 1554 |
| HpaII | CCGG | 4 cut(s) | 122, 403, 1373, 1634 |
| HphI | GGTGA | 1 cut(s) | 893 |
| Hpy166II | GTNNAC | 9 cut(s) | 165, 191, 247, 268, 558, 745, 1075, 1504, 1639 |
| Hpy188III | TCNNGA | 7 cut(s) | 155, 173, 706, 1160, 1396, 1484, 1532 |
| Hpy8I | GTNNAC | 9 cut(s) | 165, 191, 247, 268, 558, 745, 1075, 1504, 1639 |
| Hpy99I | CGWCG | 1 cut(s) | 530 |
| HpyAV | CCTTC | 5 cut(s) | 319, 878, 1529, 1565, 1670 |
| HpyCH4III | ACNGT | 7 cut(s) | 169, 477, 486, 530, 694, 901, 1643 |
| HpyCH4IV | ACGT | 5 cut(s) | 132, 321, 361, 1251, 1500 |
| HpyCH4V | TGCA | 6 cut(s) | 93, 1370, 1478, 1589, 1601, 1742 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1038, 1586 |
| HpyF3I | CTNAG | 7 cut(s) | 146, 325, 340, 410, 418, 656, 1117 |
| HpySE526I | ACGT | 5 cut(s) | 132, 321, 361, 1251, 1500 |
| Hsp92II | CATG | 7 cut(s) | 55, 106, 158, 393, 1019, 1106, 1654 |
| HspAI | GCGC | 3 cut(s) | 1047, 1065, 1095 |
| Kzo9I | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| LmnI | GCTCC | 1 cut(s) | 887 |
| Lsp1109I | GCAGC | 2 cut(s) | 193, 409 |
| LweI | GCATC | 4 cut(s) | 86, 246, 1199, 1567 |
| MaeI | CTAG | 9 cut(s) | 9, 194, 252, 1160, 1347, 1532, 1581, 1658, 1758 |
| MaeII | ACGT | 5 cut(s) | 132, 321, 361, 1251, 1500 |
| MaeIII | GTNAC | 4 cut(s) | 357, 413, 714, 777 |
| MalI | GATC | 6 cut(s) | 440, 878, 1215, 1320, 1482, 1725 |
| MboI | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| MboII | GAAGA | 6 cut(s) | 727, 912, 986, 1520, 1556, 1692 |
| MfeI | CAATTG | 3 cut(s) | 550, 1356, 1785 |
| MflI | RGATCY | 1 cut(s) | 438 |
| MlyI | GAGTC | 2 cut(s) | 1481, 1563 |
| MmeI | TCCRAC | 3 cut(s) | 549, 1127, 1653 |
| MroXI | GAANNNNTTC | 1 cut(s) | 916 |
| MseI | TTAA | 3 cut(s) | 435, 846, 951 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1020 |
| MspA1I | CMGCKG | 1 cut(s) | 422 |
| MspI | CCGG | 4 cut(s) | 122, 403, 1373, 1634 |
| MspR9I | CCNGG | 3 cut(s) | 122, 1387, 1634 |
| MunI | CAATTG | 3 cut(s) | 550, 1356, 1785 |
| Mva1269I | GAATGC | 1 cut(s) | 56 |
| MvaI | CCWGG | 1 cut(s) | 1387 |
| MvnI | CGCG | 1 cut(s) | 1065 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1038, 1586 |
| NciI | CCSGG | 2 cut(s) | 122, 1634 |
| NdeI | CATATG | 1 cut(s) | 1738 |
| NdeII | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| NlaIII | CATG | 7 cut(s) | 55, 106, 158, 393, 1019, 1106, 1654 |
| NlaIV | GGNNCC | 5 cut(s) | 407, 474, 619, 889, 1631 |
| NmuCI | GTSAC | 1 cut(s) | 413 |
| NspV | TTCGAA | 1 cut(s) | 291 |
| PagI | TCATGA | 1 cut(s) | 154 |
| PctI | GAATGC | 1 cut(s) | 56 |
| PdmI | GAANNNNTTC | 1 cut(s) | 916 |
| PfeI | GAWTC | 4 cut(s) | 98, 603, 709, 1273 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1672 |
| PfoI | TCCNGGA | 1 cut(s) | 1385 |
| PkrI | GCNGC | 2 cut(s) | 183, 424 |
| PleI | GAGTC | 2 cut(s) | 1481, 1562 |
| PpsI | GAGTC | 2 cut(s) | 1481, 1562 |
| PsiI | TTATAA | 1 cut(s) | 1410 |
| Psp1406I | AACGTT | 1 cut(s) | 1251 |
| Psp6I | CCWGG | 1 cut(s) | 1385 |
| PspFI | CCCAGC | 1 cut(s) | 750 |
| PspGI | CCWGG | 1 cut(s) | 1385 |
| PspN4I | GGNNCC | 5 cut(s) | 407, 474, 619, 889, 1631 |
| PspPI | GGNCC | 1 cut(s) | 1639 |
| PsuI | RGATCY | 1 cut(s) | 438 |
| PvuII | CAGCTG | 1 cut(s) | 422 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1020 |
| SalI | GTCGAC | 1 cut(s) | 266 |
| SaqAI | TTAA | 3 cut(s) | 435, 846, 951 |
| SatI | GCNGC | 2 cut(s) | 182, 423 |
| Sau3AI | GATC | 6 cut(s) | 438, 876, 1213, 1318, 1480, 1723 |
| Sau96I | GGNCC | 1 cut(s) | 1639 |
| SchI | GAGTC | 2 cut(s) | 1481, 1563 |
| ScrFI | CCNGG | 3 cut(s) | 122, 1387, 1634 |
| SfaNI | GCATC | 4 cut(s) | 86, 246, 1199, 1567 |
| SfcI | CTRYAG | 6 cut(s) | 165, 427, 684, 1170, 1423, 1719 |
| SfuI | TTCGAA | 1 cut(s) | 291 |
| SinI | GGWCC | 1 cut(s) | 1639 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1020 |
| SmlI | CTYRAG | 3 cut(s) | 815, 1445, 1772 |
| SmoI | CTYRAG | 3 cut(s) | 815, 1445, 1772 |
| SpeI | ACTAGT | 1 cut(s) | 1657 |
| SsiI | CCGC | 2 cut(s) | 142, 839 |
| SspMI | CTAG | 9 cut(s) | 9, 194, 252, 1160, 1347, 1532, 1581, 1658, 1758 |
| StyD4I | CCNGG | 3 cut(s) | 120, 1385, 1632 |
| StyI | CCWWGG | 2 cut(s) | 1204, 1314 |
| TaaI | ACNGT | 7 cut(s) | 169, 477, 486, 530, 694, 901, 1643 |
| TaiI | ACGT | 5 cut(s) | 135, 324, 364, 1254, 1503 |
| TaqI | TCGA | 6 cut(s) | 240, 267, 291, 465, 678, 1233 |
| TaqII | GACCGA | 1 cut(s) | 721 |
| TatI | WGTACW | 5 cut(s) | 190, 244, 491, 569, 638 |
| TfiI | GAWTC | 4 cut(s) | 98, 603, 709, 1273 |
| Tru1I | TTAA | 3 cut(s) | 435, 846, 951 |
| Tru9I | TTAA | 3 cut(s) | 435, 846, 951 |
| TscAI | CASTG | 1 cut(s) | 699 |
| TseFI | GTSAC | 1 cut(s) | 413 |
| TseI | GCWGC | 2 cut(s) | 181, 422 |
| Tsp45I | GTSAC | 1 cut(s) | 413 |
| TspDTI | ATGAA | 7 cut(s) | 347, 469, 970, 1002, 1099, 1119, 1667 |
| TspGWI | ACGGA | 1 cut(s) | 984 |
| TspRI | CASTG | 1 cut(s) | 699 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1672 |
| VpaK11BI | GGWCC | 1 cut(s) | 1639 |
| XapI | RAATTY | 8 cut(s) | 21, 200, 374, 1106, 1221, 1281, 1390, 1687 |
| XbaI | TCTAGA | 2 cut(s) | 1159, 1531 |
| XmiI | GTMKAC | 3 cut(s) | 164, 267, 744 |
| XmnI | GAANNNNTTC | 1 cut(s) | 916 |
| XspI | CTAG | 9 cut(s) | 9, 194, 252, 1160, 1347, 1532, 1581, 1658, 1758 |