Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015684

Physical Location & Seq

Genomic Coordinates Forward (+)

23763407 .. 23770736

Gene Structure 7330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0173800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGCAAGTGCAGCAAAACCCTAGCATCCCGGTCAGCGAAGTCTACTGGTCTCTTCTCCACAAAGCCGATAAGAAATTCTCCAAAATCCGAGAGCTCCCCTATTACCACCGCAACAGGCACGAGTACGACGCCTACTTCTACAAGGTCTTCAAGGTCTACACGCAGCTCTGGAAATTCCAGCAAGAAAACCGCCAAAAGCTCGTCGAGGCCGGTCTCCGGCGATCGGAGATCGGCGAGATCGCGTCGCGGATCGCGCAGCTTTACTTGGGGCAGTACATGAGGACCAGCGAGGCTAGCTATCTGTCCGAGGCGTACATTTTCTACGAGGCGATTCTGAGCAGAGAGTACTTCAAGGAGGGCATGTTGCAGGACCTCAACTTGGCCAGCAAGCAGCTCAGGTTCATTTCTAGGTTTCTCATGGTGTGCTTGCTTTTGAATCGCCGAGAGATGGTGCAGCAGCTGCTTCATCAGCTCAAGGCCTTGGTTGATGACTGCAAGAGGACCTTCCAGGAAACTGATTTTAAAGAATGGAAGCTGGTGATTCAGGAAATAGTTAGATTTTTGAAAGCTGACACAGCTTTTATGAATATCAGGCCATTGAGATATAGTATTGTCCTGGAATGTCATCCCGATTCCTTACCACCTGTTTCCACATTGGTTGTAAGGAGGTCTTTGAGACTGCGAGATGCGATACTAAGCAGCTACCATCATAATGAGGTAAAGTTTTCAGAGCTCACTCTAGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCAAATGTTGCTAGAAACGGTCAGAACGGGGCGCCAGGGTCCGGCCGCATTAACTACTCCCAAGATATTGCTGATCCTACTCTGCCACATAACCCACGGAAAGCTGTCTTATATCGTCCTTCTGTTACACATTTTCTGGCAGTTCTGGCAACAGTTTGTGAGGAGCTTCCATCTGATGGAGTTATCTTGATATATCTGTCCGCTTCAGGTTCTGGAATTTATGCTGATGCGACATCTGATAGACTAAATCCTTCTTGTGGACAAAGTAAAGGAGATGACTCAAGCTTACATGCTAGTTGTTTAAACTTTGGTAGCCATGGAAATGGAGGAATAAATAGCATCTATCCCAGTGACTTGGTTCCATTTACAAGAAGGCCGCTCTTTCTAGTTATTGACTGTGACAGCAGTGAAGCTTTTGAGGCTATAAATGGAGTACAAAAAGGAGAGACAGCTGCAATGCTCCTATCTTCGAGCTCTTCATATCAAGCTTCTGATGTTGGTTCCTCTCGTCAGCCAAGTGGAAGCCTATTCACTATTTTCCTTACAGCTCCAATGCAGGCTTTCTGTTTATTGCTTGGTGTTTCAGGCACTGACATTGACATGGATATATATAACAAGACTGAGAAGCTGCTTTCTAGTTCATTAAGTGACTGGGGGTCTACTTTGGCAACATCAGATACTATTGACCCTGTTTGGGCACAGGTTTTGACTGATACATTCCTGAGGCGACTCCTATTGAGGTTCATATTTTGTCGGGCGGTGCTATCACTCTATGCTCCAACCTTCAATAAGAAGGAATTTATTCCCAAGTGTGTACCATGCCTCCCAGCGTCTTTCCTGCCAACAACAGCTGCATGCCAGACTGTTATTTTGCAGATAGCGGATATCTTCGGAGCGAGCTCTAAATTCATTTTCTCAGAAGGACTTGTACTCCCAGAAAATAGACAGGGTGACACAGAAGCAGTGCCATGTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005353 GO:0005355 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005887 GO:0006810 GO:0006950 GO:0006970 GO:0006995 GO:0007034 GO:0007154 GO:0007623 GO:0008150 GO:0008515 GO:0008643 GO:0008645 GO:0009266 GO:0009267 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009628 GO:0009642 GO:0009646 GO:0009705 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009987 GO:0009991 GO:0010033 GO:0015144 GO:0015145 GO:0015149 GO:0015154 GO:0015157 GO:0015749 GO:0015755 GO:0015766 GO:0015770 GO:0015772 GO:0016020 GO:0016021 GO:0016043 GO:0022607 GO:0022857 GO:0031090 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033231 GO:0033554 GO:0034219 GO:0034284 GO:0034285 GO:0034486 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0048511 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051716 GO:0055085 GO:0065003 GO:0070417 GO:0071496 GO:0071702 GO:0071840 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1902334 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MtN3_slv

Protein Analysis

591

Amino Acids

66.65

Weight (kDa)

6.83

Isoelectric Point (pI)

50.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SCAI	PF12070	18 - 526	4.1e-193	Protein SCAI

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015684)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g08940 FvH4_7g08940 FvH4_7g08940
prunus_persica	Prupe.2G118600_v2.0.a1 Prupe.2G118600_v2.0.a1
pyrus_communis	pycom07g07660
rosa_chinensis	RchiOBHm_Chr1g0344401
rosa_laevigata	RLG00000028900
rosa_multiflora	Rmu_sc0008332.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309760
rosa_rugosa	Rorug01G0173700 Rorug01G0173800
rosa_samantha	Rh1AG190000 Rh1BG156900 Rh1CG175500
rosa_wichuraiana	Rw1G015660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	829
AccB7I	CCANNNNNTGG	1 cut(s)	974
AccBSI	CCGCTC	1 cut(s)	1177
AccI	GTMKAC	3 cut(s)	42, 156, 1457
AccII	CGCG	3 cut(s)	242, 247, 254
AciI	CCGC	8 cut(s)	109, 190, 247, 844, 999, 1175, 1556, 1679
AclWI	GGATC	2 cut(s)	257, 866
AcoI	YGGCCR	2 cut(s)	381, 841
AcsI	RAATTY	5 cut(s)	74, 173, 1014, 1595, 1703
AcuI	CTGAAG	1 cut(s)	987
AcyI	GRCGYC	2 cut(s)	129, 830
AfaI	GTAC	7 cut(s)	125, 275, 314, 347, 1233, 1614, 1728
AfiI	CCNNNNNNNGG	8 cut(s)	216, 223, 379, 448, 839, 974, 1055, 1492
AgsI	TTSAA	6 cut(s)	151, 352, 436, 565, 761, 1585
AhdI	GACNNNNNGTC	1 cut(s)	1453
AjnI	CCWGG	3 cut(s)	507, 615, 832
Alw21I	GWGCWC	4 cut(s)	96, 735, 1274, 1700
Alw26I	GTCTC	4 cut(s)	54, 218, 670, 1238
AlwI	GGATC	2 cut(s)	257, 866
AlwNI	CAGNNNCTG	3 cut(s)	460, 1010, 1388
AoxI	GGCC	6 cut(s)	207, 381, 477, 593, 841, 1172
ApoI	RAATTY	5 cut(s)	74, 173, 1014, 1595, 1703
ArsI	GACNNNNNNTTYG	2 cut(s)	1651, 1683
Asp700I	GAANNNNTTC	1 cut(s)	1599
AspLEI	GCGC	2 cut(s)	256, 832
AspS9I	GGNCC	4 cut(s)	282, 370, 501, 837
AsuC2I	CCSGG	1 cut(s)	29
AsuHPI	GGTGA	2 cut(s)	550, 1760
AsuNHI	GCTAGC	1 cut(s)	293
AvaII	GGWCC	4 cut(s)	282, 370, 501, 837
AxyI	CCTNAGG	1 cut(s)	1520
BaeGI	GKGCMC	1 cut(s)	1498
BalI	TGGCCA	1 cut(s)	383
BanI	GGYRCC	1 cut(s)	829
BanII	GRGCYC	4 cut(s)	96, 735, 1274, 1700
BarI	GAAGNNNNNNTAC	2 cut(s)	1710, 1742
BauI	CACGAG	1 cut(s)	119
BbsI	GAAGAC	1 cut(s)	139
Bbv12I	GWGCWC	4 cut(s)	96, 735, 1274, 1700
BccI	CCATC	4 cut(s)	442, 714, 968, 976
BciT130I	CCWGG	3 cut(s)	509, 617, 834
BcnI	CCSGG	1 cut(s)	29
BcoDI	GTCTC	4 cut(s)	54, 218, 670, 1238
BfaI	CTAG	9 cut(s)	21, 294, 408, 740, 780, 810, 1092, 1184, 1434
BfoI	RGCGCY	1 cut(s)	833
BmcAI	AGTACT	1 cut(s)	347
Bme1390I	CCNGG	4 cut(s)	29, 509, 617, 834
Bme18I	GGWCC	4 cut(s)	282, 370, 501, 837
BmeRI	GACNNNNNGTC	1 cut(s)	1453
BmgT120I	GGNCC	4 cut(s)	282, 370, 501, 837
BmiI	GGNNCC	5 cut(s)	777, 831, 838, 1158, 1300
BmrFI	CCNGG	4 cut(s)	29, 509, 617, 834
BmrI	ACTGGG	2 cut(s)	1140, 1459
BmsI	GCATC	5 cut(s)	33, 676, 744, 1015, 1146
BmtI	GCTAGC	1 cut(s)	297
BmuI	ACTGGG	2 cut(s)	1140, 1459
BpiI	GAAGAC	1 cut(s)	139
BpmI	CTGGAG	1 cut(s)	788
Bpu10I	CCTNAGC	1 cut(s)	395
BpuEI	CTTGAG	2 cut(s)	458, 1063
BpuMI	CCSGG	1 cut(s)	29
BsaHI	GRCGYC	2 cut(s)	129, 830
BsaI	GGTCTC	2 cut(s)	54, 218
BsaJI	CCNNGG	5 cut(s)	306, 480, 833, 893, 1114
BsaXI	ACNNNNNCTCC	6 cut(s)	347, 377, 1605, 1635, 1713, 1743
Bsc4I	CCNNNNNNNGG	8 cut(s)	216, 223, 379, 448, 839, 974, 1055, 1492
Bse118I	RCCGGY	1 cut(s)	209
Bse1I	ACTGG	4 cut(s)	50, 796, 1146, 1454
Bse21I	CCTNAGG	1 cut(s)	1520
Bse3DI	GCAATG	1 cut(s)	1260
BseBI	CCWGG	3 cut(s)	509, 617, 834
BseDI	CCNNGG	5 cut(s)	306, 480, 833, 893, 1114
BseGI	GGATG	3 cut(s)	24, 625, 759
BseLI	CCNNNNNNNGG	8 cut(s)	216, 223, 379, 448, 839, 974, 1055, 1492
BseMI	GCAATG	1 cut(s)	1260
BseMII	CTCAG	5 cut(s)	326, 409, 1410, 1511, 1728
BseNI	ACTGG	4 cut(s)	50, 796, 1146, 1454
BseRI	GAGGAG	1 cut(s)	974
BseSI	GKGCMC	1 cut(s)	1498
BseX3I	CGGCCG	1 cut(s)	841
BseYI	CCCAGC	1 cut(s)	1624
BsgI	GTGCAG	2 cut(s)	29, 473
Bsh1236I	CGCG	3 cut(s)	242, 247, 254
Bsh1285I	CGRYCG	2 cut(s)	224, 844
BshFI	GGCC	6 cut(s)	209, 383, 479, 595, 843, 1174
BshNI	GGYRCC	1 cut(s)	829
BsiEI	CGRYCG	2 cut(s)	224, 844
BsiHKAI	GWGCWC	4 cut(s)	96, 735, 1274, 1700
BsiSI	CCGG	4 cut(s)	29, 210, 217, 840
BslI	CCNNNNNNNGG	8 cut(s)	216, 223, 379, 448, 839, 974, 1055, 1492
BsmAI	GTCTC	4 cut(s)	54, 218, 670, 1238
BsnI	GGCC	6 cut(s)	209, 383, 479, 595, 843, 1174
Bso31I	GGTCTC	2 cut(s)	54, 218
Bsp1286I	GDGCHC	5 cut(s)	96, 735, 1274, 1498, 1700
Bsp143I	GATC	5 cut(s)	221, 228, 237, 249, 871
Bsp19I	CCATGG	1 cut(s)	1114
BspACI	CCGC	8 cut(s)	109, 190, 247, 844, 999, 1175, 1556, 1679
BspANI	GGCC	6 cut(s)	209, 383, 479, 595, 843, 1174
BspCNI	CTCAG	5 cut(s)	327, 408, 1411, 1512, 1727
BspFNI	CGCG	3 cut(s)	242, 247, 254
BspHI	TCATGA	1 cut(s)	1772
BspLI	GGNNCC	5 cut(s)	777, 831, 838, 1158, 1300
BspOI	GCTAGC	1 cut(s)	297
BspPI	GGATC	2 cut(s)	257, 866
BspQI	GCTCTTC	1 cut(s)	1279
BspT107I	GGYRCC	1 cut(s)	829
BspTNI	GGTCTC	2 cut(s)	54, 218
BsrBI	CCGCTC	1 cut(s)	1177
BsrDI	GCAATG	1 cut(s)	1260
BsrFI	RCCGGY	1 cut(s)	209
BsrI	ACTGG	4 cut(s)	50, 796, 1146, 1454
BssAI	RCCGGY	1 cut(s)	209
BssECI	CCNNGG	5 cut(s)	306, 480, 833, 893, 1114
BssMI	GATC	5 cut(s)	221, 228, 237, 249, 871
BssNI	GRCGYC	2 cut(s)	129, 830
BssSI	CACGAG	1 cut(s)	119
BssT1I	CCWWGG	2 cut(s)	480, 1114
Bst2BI	CACGAG	1 cut(s)	119
Bst2UI	CCWGG	3 cut(s)	509, 617, 834
Bst4CI	ACNGT	4 cut(s)	818, 952, 1196, 1663
Bst6I	CTCTTC	2 cut(s)	57, 1279
BstACI	GRCGYC	2 cut(s)	129, 830
BstAPI	GCANNNNNTGC	1 cut(s)	460
BstC8I	GCNNGC	7 cut(s)	295, 385, 389, 428, 1356, 1654, 1696
BstDEI	CTNAG	6 cut(s)	335, 395, 695, 1419, 1520, 1714
BstDSI	CCRYGG	2 cut(s)	893, 1114
BstF5I	GGATG	3 cut(s)	24, 625, 759
BstFNI	CGCG	3 cut(s)	242, 247, 254
BstH2I	RGCGCY	1 cut(s)	833
BstHHI	GCGC	2 cut(s)	256, 832
BstKTI	GATC	5 cut(s)	224, 231, 240, 252, 874
BstMAI	GTCTC	4 cut(s)	54, 218, 670, 1238
BstMBI	GATC	5 cut(s)	221, 228, 237, 249, 871
BstMCI	CGRYCG	2 cut(s)	224, 844
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 253, 294, 460, 469, 575, 944, 1217
BstNI	CCWGG	3 cut(s)	509, 617, 834
BstNSI	RCATGY	3 cut(s)	364, 1091, 1656
BstSCI	CCNGG	4 cut(s)	27, 507, 615, 832
BstSLI	GKGCMC	1 cut(s)	1498
BstUI	CGCG	3 cut(s)	242, 247, 254
BstV2I	GAAGAC	1 cut(s)	139
BstXI	CCANNNNNNTGG	2 cut(s)	1121, 1153
BstZI	CGGCCG	1 cut(s)	841
Bsu36I	CCTNAGG	1 cut(s)	1520
BsuRI	GGCC	6 cut(s)	209, 383, 479, 595, 843, 1174
BtgI	CCRYGG	2 cut(s)	893, 1114
BtsCI	GGATG	3 cut(s)	24, 625, 759
BtsI	GCAGTG	2 cut(s)	1210, 1767
BtsIMutI	CAGTG	4 cut(s)	1153, 1210, 1386, 1767
Cac8I	GCNNGC	7 cut(s)	295, 385, 389, 428, 1356, 1654, 1696
CaiI	CAGNNNCTG	3 cut(s)	460, 1010, 1388
CciI	TCATGA	1 cut(s)	1772
CfoI	GCGC	2 cut(s)	256, 832
Cfr10I	RCCGGY	1 cut(s)	209
Cfr13I	GGNCC	4 cut(s)	282, 370, 501, 837
CseI	GACGC	3 cut(s)	137, 231, 1617
Csp6I	GTAC	7 cut(s)	124, 274, 313, 346, 1232, 1613, 1727
CspCI	CAANNNNNGTGG	2 cut(s)	640, 675
CviQI	GTAC	7 cut(s)	124, 274, 313, 346, 1232, 1613, 1727
DdeI	CTNAG	6 cut(s)	335, 395, 695, 1419, 1520, 1714
DinI	GGCGCC	1 cut(s)	831
DpnI	GATC	5 cut(s)	223, 230, 239, 251, 873
DpnII	GATC	5 cut(s)	221, 228, 237, 249, 871
DraI	TTTAAA	2 cut(s)	523, 1101
DriI	GACNNNNNGTC	1 cut(s)	1453
EaeI	YGGCCR	2 cut(s)	381, 841
EagI	CGGCCG	1 cut(s)	841
Eam1104I	CTCTTC	2 cut(s)	57, 1279
Eam1105I	GACNNNNNGTC	1 cut(s)	1453
EarI	CTCTTC	2 cut(s)	57, 1279
Ecl136II	GAGCTC	4 cut(s)	94, 733, 1272, 1698
EclXI	CGGCCG	1 cut(s)	841
Eco130I	CCWWGG	2 cut(s)	480, 1114
Eco147I	AGGCCT	1 cut(s)	479
Eco24I	GRGCYC	4 cut(s)	96, 735, 1274, 1700
Eco31I	GGTCTC	2 cut(s)	54, 218
Eco32I	GATATC	1 cut(s)	1684
Eco47I	GGWCC	4 cut(s)	282, 370, 501, 837
Eco52I	CGGCCG	1 cut(s)	841
Eco53kI	GAGCTC	4 cut(s)	94, 733, 1272, 1698
Eco57I	CTGAAG	1 cut(s)	987
Eco81I	CCTNAGG	1 cut(s)	1520
EcoICRI	GAGCTC	4 cut(s)	94, 733, 1272, 1698
EcoO109I	RGGNCCY	2 cut(s)	370, 501
EcoRII	CCWGG	3 cut(s)	507, 615, 832
EcoRV	GATATC	1 cut(s)	1684
EcoT14I	CCWWGG	2 cut(s)	480, 1114
EcoT38I	GRGCYC	4 cut(s)	96, 735, 1274, 1700
EgeI	GGCGCC	1 cut(s)	831
EheI	GGCGCC	1 cut(s)	831
ErhI	CCWWGG	2 cut(s)	480, 1114
FalI	AAGNNNNNCTT	4 cut(s)	488, 520, 655, 687
FblI	GTMKAC	3 cut(s)	42, 156, 1457
FokI	GGATG	3 cut(s)	11, 612, 766
FriOI	GRGCYC	4 cut(s)	96, 735, 1274, 1700
FspBI	CTAG	9 cut(s)	21, 294, 408, 740, 780, 810, 1092, 1184, 1434
GlaI	GCGC	2 cut(s)	255, 831
GsaI	CCCAGC	1 cut(s)	1628
GsuI	CTGGAG	1 cut(s)	788
HaeII	RGCGCY	1 cut(s)	833
HaeIII	GGCC	6 cut(s)	209, 383, 479, 595, 843, 1174
HapII	CCGG	4 cut(s)	29, 210, 217, 840
HgaI	GACGC	3 cut(s)	137, 231, 1617
HhaI	GCGC	2 cut(s)	256, 832
Hin1I	GRCGYC	2 cut(s)	129, 830
Hin6I	GCGC	2 cut(s)	254, 830
HinP1I	GCGC	2 cut(s)	254, 830
HindIII	AAGCTT	3 cut(s)	1081, 1209, 1284
HinfI	GANTC	6 cut(s)	331, 436, 541, 632, 1076, 1527
HpaII	CCGG	4 cut(s)	29, 210, 217, 840
HphI	GGTGA	2 cut(s)	550, 1760
Hpy166II	GTNNAC	5 cut(s)	43, 157, 1058, 1458, 1613
Hpy188III	TCNNGA	9 cut(s)	169, 545, 629, 740, 767, 985, 1011, 1519, 1773
Hpy8I	GTNNAC	5 cut(s)	43, 157, 1058, 1458, 1613
Hpy99I	CGWCG	3 cut(s)	131, 206, 247
HpyAV	CCTTC	7 cut(s)	514, 927, 1059, 1164, 1585, 1591, 1712
HpyCH4III	ACNGT	4 cut(s)	818, 952, 1196, 1663
HpyCH4V	TGCA	9 cut(s)	4, 10, 367, 454, 495, 1253, 1354, 1652, 1672
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 253, 294, 460, 469, 575, 944, 1217
HpyF3I	CTNAG	6 cut(s)	335, 395, 695, 1419, 1520, 1714
Hsp92I	GRCGYC	2 cut(s)	129, 830
HspAI	GCGC	2 cut(s)	254, 830
KasI	GGCGCC	1 cut(s)	829
Kzo9I	GATC	5 cut(s)	221, 228, 237, 249, 871
LguI	GCTCTTC	1 cut(s)	1279
LmnI	GCTCC	6 cut(s)	99, 961, 1263, 1351, 1579, 1691
LweI	GCATC	5 cut(s)	33, 676, 744, 1015, 1146
MaeI	CTAG	9 cut(s)	21, 294, 408, 740, 780, 810, 1092, 1184, 1434
MaeIII	GTNAC	5 cut(s)	922, 1148, 1196, 1445, 1748
MalI	GATC	5 cut(s)	223, 230, 239, 251, 873
MbiI	CCGCTC	1 cut(s)	1177
MboI	GATC	5 cut(s)	221, 228, 237, 249, 871
MboII	GAAGA	5 cut(s)	44, 139, 1257, 1266, 1678
MhlI	GDGCHC	5 cut(s)	96, 735, 1274, 1498, 1700
MlsI	TGGCCA	1 cut(s)	383
MluCI	AATT	5 cut(s)	74, 173, 1014, 1595, 1703
MluNI	TGGCCA	1 cut(s)	383
Mly113I	GGCGCC	1 cut(s)	830
MlyI	GAGTC	2 cut(s)	1070, 1521
MmeI	TCCRAC	1 cut(s)	1601
Mox20I	TGGCCA	1 cut(s)	383
MroXI	GAANNNNTTC	1 cut(s)	1599
MscI	TGGCCA	1 cut(s)	383
MseI	TTAA	4 cut(s)	522, 849, 1100, 1442
MslI	CAYNNNNRTG	4 cut(s)	711, 1119, 1397, 1771
Msp20I	TGGCCA	1 cut(s)	383
MspA1I	CMGCKG	3 cut(s)	460, 1250, 1649
MspI	CCGG	4 cut(s)	29, 210, 217, 840
MspR9I	CCNGG	4 cut(s)	29, 509, 617, 834
MssI	GTTTAAAC	1 cut(s)	1101
MvaI	CCWGG	3 cut(s)	509, 617, 834
MvnI	CGCG	3 cut(s)	242, 247, 254
MwoI	GCNNNNNNNGC	8 cut(s)	10, 253, 294, 460, 469, 575, 944, 1217
NarI	GGCGCC	1 cut(s)	830
NciI	CCSGG	1 cut(s)	29
NcoI	CCATGG	1 cut(s)	1114
NdeII	GATC	5 cut(s)	221, 228, 237, 249, 871
NheI	GCTAGC	1 cut(s)	293
NlaIV	GGNNCC	5 cut(s)	777, 831, 838, 1158, 1300
NmeAIII	GCCGAG	1 cut(s)	467
NmuCI	GTSAC	4 cut(s)	1148, 1196, 1445, 1748
NspI	RCATGY	3 cut(s)	364, 1091, 1656
PaeI	GCATGC	1 cut(s)	1656
PagI	TCATGA	1 cut(s)	1772
PceI	AGGCCT	1 cut(s)	479
PciSI	GCTCTTC	1 cut(s)	1279
PdmI	GAANNNNTTC	1 cut(s)	1599
PfeI	GAWTC	4 cut(s)	331, 436, 541, 632
PflMI	CCANNNNNTGG	1 cut(s)	974
PfoI	TCCNGGA	2 cut(s)	507, 615
Ple19I	CGATCG	1 cut(s)	224
PleI	GAGTC	2 cut(s)	1070, 1521
PluTI	GGCGCC	1 cut(s)	833
PmeI	GTTTAAAC	1 cut(s)	1101
PpsI	GAGTC	2 cut(s)	1070, 1521
PpuMI	RGGWCCY	2 cut(s)	370, 501
Psp124BI	GAGCTC	4 cut(s)	96, 735, 1274, 1700
Psp5II	RGGWCCY	2 cut(s)	370, 501
Psp6I	CCWGG	3 cut(s)	507, 615, 832
PspFI	CCCAGC	1 cut(s)	1624
PspGI	CCWGG	3 cut(s)	507, 615, 832
PspN4I	GGNNCC	5 cut(s)	777, 831, 838, 1158, 1300
PspPI	GGNCC	4 cut(s)	282, 370, 501, 837
PspPPI	RGGWCCY	2 cut(s)	370, 501
PstNI	CAGNNNCTG	3 cut(s)	460, 1010, 1388
PvuI	CGATCG	1 cut(s)	224
PvuII	CAGCTG	3 cut(s)	460, 1250, 1649
RsaI	GTAC	7 cut(s)	125, 275, 314, 347, 1233, 1614, 1728
RsaNI	GTAC	7 cut(s)	124, 274, 313, 346, 1232, 1613, 1727
RseI	CAYNNNNRTG	4 cut(s)	711, 1119, 1397, 1771
SacI	GAGCTC	4 cut(s)	96, 735, 1274, 1700
SapI	GCTCTTC	1 cut(s)	1279
SaqAI	TTAA	4 cut(s)	522, 849, 1100, 1442
Sau3AI	GATC	5 cut(s)	221, 228, 237, 249, 871
Sau96I	GGNCC	4 cut(s)	282, 370, 501, 837
ScaI	AGTACT	1 cut(s)	347
SchI	GAGTC	2 cut(s)	1070, 1521
ScrFI	CCNGG	4 cut(s)	29, 509, 617, 834
SduI	GDGCHC	5 cut(s)	96, 735, 1274, 1498, 1700
SfaNI	GCATC	5 cut(s)	33, 676, 744, 1015, 1146
SfoI	GGCGCC	1 cut(s)	831
SinI	GGWCC	4 cut(s)	282, 370, 501, 837
SmiMI	CAYNNNNRTG	4 cut(s)	711, 1119, 1397, 1771
SmlI	CTYRAG	2 cut(s)	473, 1078
SmoI	CTYRAG	2 cut(s)	473, 1078
SphI	GCATGC	1 cut(s)	1656
Sse9I	AATT	5 cut(s)	74, 173, 1014, 1595, 1703
SseBI	AGGCCT	1 cut(s)	479
SsiI	CCGC	8 cut(s)	109, 190, 247, 844, 999, 1175, 1556, 1679
SspDI	GGCGCC	1 cut(s)	829
SspMI	CTAG	9 cut(s)	21, 294, 408, 740, 780, 810, 1092, 1184, 1434
SstI	GAGCTC	4 cut(s)	96, 735, 1274, 1700
StuI	AGGCCT	1 cut(s)	479
StyD4I	CCNGG	4 cut(s)	27, 507, 615, 832
StyI	CCWWGG	2 cut(s)	480, 1114
TaaI	ACNGT	4 cut(s)	818, 952, 1196, 1663
TaqI	TCGA	2 cut(s)	204, 1268
TasI	AATT	5 cut(s)	74, 173, 1014, 1595, 1703
TatI	WGTACW	4 cut(s)	273, 345, 1231, 1726
TauI	GCSGC	2 cut(s)	846, 1177
TfiI	GAWTC	4 cut(s)	331, 436, 541, 632
Tru1I	TTAA	4 cut(s)	522, 849, 1100, 1442
Tru9I	TTAA	4 cut(s)	522, 849, 1100, 1442
TscAI	CASTG	4 cut(s)	1153, 1210, 1393, 1767
TseFI	GTSAC	4 cut(s)	1148, 1196, 1445, 1748
Tsp45I	GTSAC	4 cut(s)	1148, 1196, 1445, 1748
TspDTI	ATGAA	8 cut(s)	391, 455, 599, 1266, 1428, 1531, 1696, 1761
TspGWI	ACGGA	1 cut(s)	910
TspRI	CASTG	4 cut(s)	1153, 1210, 1393, 1767
Van91I	CCANNNNNTGG	1 cut(s)	974
VpaK11BI	GGWCC	4 cut(s)	282, 370, 501, 837
XapI	RAATTY	5 cut(s)	74, 173, 1014, 1595, 1703
XbaI	TCTAGA	1 cut(s)	739
XceI	RCATGY	3 cut(s)	364, 1091, 1656
XmiI	GTMKAC	3 cut(s)	42, 156, 1457
XmnI	GAANNNNTTC	1 cut(s)	1599
XspI	CTAG	9 cut(s)	21, 294, 408, 740, 780, 810, 1092, 1184, 1434
ZrmI	AGTACT	1 cut(s)	347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.