Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0013163

Physical Location & Seq

Genomic Coordinates Reverse (-)

34168114 .. 34171136

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0237200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGAAGGCCATGCCCCTACCCTTTGAGGAGTTTCAAGGGAAGGGGGTGTTAGATTTCTCATCTGATTCTTCAGATTTGTTAGCTTCACCACCACCACAGGGTCACCATCAACAACCACAAAAGTGGAAGGAGAATTGCTATGTGGGCAGCACTGAGCCCACTTCTGTTCTCGATACCCGAAGAAGCCCAAGCCCTCCTACATCCTCTTCAACTCTGTCTTCTTCTCACGGCAGCGGCGGTGGAAGTGGGTCTACAGATACCACCACTACCACCGGCGTGGCGGCTGCGGCTCCGGCAGAAAACAAGCCATTTGAAGCAGGTCTAGAGGAAGCAAAATGTGGACCACCACTTGGAATGGAGGACTGGGAGAGTGTGCTGTCTGAGTCACCAGGTCAAGAGCAGTCCATTCTTAGGTTGATGATGAGTGACATTGAAGACCCATCTCTTGGATTGAACAAGCTGTTGCAGAGTGGGGTTGGTTCTCATCAAGATTTTGGGTTTCATGATGTGGTGGAGGATCAAGGTTATGGCGCCTTTGAAGAACACAATACAGGGAGTTTGAATTTGGGGATGAGCAGCATTGCTAACCCTTCTCTGCAAGCAACATCTTGTTCTGAAATTCCTTTCAATGGCTCAAATGCTACCGTTTTCTCTGCTTCAGTGAACAATCTGTTCCCAGGTTCACTACCTCCTGGTTTGTTCCAACAGCAACAACAATTGGTTGAGCCTTTGGATGAGAAGCCACAAATTTTCAATCCACATATGGTGATGAATCAAAACCAAGCTCAGTTTAATCAAAATCCTGCGATGTTTATGCCACTGACGTATTCCCAATTGCAAGACCACCACTTCCTTTCCCCACCTCAGGCAAAAAGGCATAATTCCGGTGGCTTTGGACCCAGTTACCCGGGCCAGAGAGTGCCGTTTTTGAATCCGGGTCAAGAGCTAATGGCTCGGGTACAGCAGCAGCAGCAGCAGCAACAACATCAGCAGCAGCTTCCGTTGCTTCCACAACATCTCCAACACAGGCCAGTAATGTTAGCCGCGAAGGACAAAATGGTGAACAATCTGGAAGGGGATAAAGAATTGATGAACAACCACCAGCTTCATCAAGCGATAGTTGACCAGCTTGTCAATGCAGCAGAGCTGATCGAAACAGGCAATCCGTTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAACAGCTCTCTCCTATTGGTAAGCCTTTTCAAAGGGCTGCTTTCTATTTCAAGGAGGCCTTGGAATTACTACTTAACATGAACAACTCTCACTCTTCTGCTAATTTGTCACCTTTTAGCCTCATTTACAAGATTGCTGCATATAAATCGTTCTCTGAAATCTCACCAGTTCTCCAATTTGCCAACTTTACTTGCAACCAAGTCATCCTTGAATCTGTGGAAGGCTTTAATCGTGTCCATGTTATCGATTTTGATATTGGCTATGGTGGGCAATGGGCTTCTTTTATGCAAGAGGTGGCTTTAAGAAATGGTGGTTCGCCTCCTTCTCTCAAAATCACTGCATTTGTATGCTCTTCGATGCACGATGAATTCGAGCTGGCTTTCACTCAAGAAAACCTCAAGAACTTTGCTTGTGAGCTCAATTTGGCATTTGAACTCGAAATTGTAAGTATTGAGGCATTGAGCTCTGGTTCTTGGCCATTACCACTTCATGGCTCAGAGGGTGTGGCAGTTGCTGTCAATCTTCCAATTGCTTCCTTCTTGAATTCCCGTTTATCGCTTCCTTTGGTCCTGCGCTTTGTTAAGCAGCTTTCTCCCAAAATTGTGGTATCCTTGGAAAGGGGCAGTGACCGGACTGATATCCCATTTCCTCACCAAATCATTCAAGCCGTTCACTGTTACTCAAGCCTTCTTGAATCATTAGATGCTGTAAATGCAAACCTAGATGCCCTGCAAAAGATTGAGCGGTACTTGCTCCAACCAAGCATTGAAAAGATTGTAATGGGCTGCCATCTTTCTCCTAAAAGGACACCGACACCTTCTTGGAGGACTCTGTTTTTGTCATCTGGGTTCTCCCCGTTGACATTCAGCAATTTCACCGAGTCCCAAGCCGAGTGCTTGGTGCAACGGACTCCAGTTGGGGGTTTCCATGTTGAGAAGAGACAGTCTTCGCTTGTGCTCTGCTGGCAGCGGAAGGATCTCATCTCAGCCTCAGGGTGGCGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004477 GO:0004488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006730 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016645 GO:0016646 GO:0016787 GO:0016810 GO:0016814 GO:0019238 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

THF_DHG_CYH THF_DHG_CYH_C

Protein Analysis

735

Amino Acids

80.71

Weight (kDa)

5.49

Isoelectric Point (pI)

60.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	374 - 734	1.2e-93	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013163)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00600 AT4G00620
fragaria_vesca	FvH4_7g13650 FvH4_7g13650
malus_domestica	MD07G1141500.v1.1 MD08G1243500.v1.1
prunus_persica	Prupe.2G162600_v2.0.a1
pyrus_communis	pycom07g14040 pycom08g21120
rosa_chinensis	RchiOBHm_Chr1g0353731
rosa_laevigata	RLG00000028263
rosa_roxburghii	Rroxscaffold_4G00301710
rosa_rugosa	Rorug01G0237200
rosa_samantha	Rh1AG249400 Rh1BG219500 Rh1CG232100 Rh1DG246500
rosa_wichuraiana	Rw1G021760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1130
Acc36I	ACCTGC	1 cut(s)	308
AccB1I	GGYRCC	1 cut(s)	530
AccB7I	CCANNNNNTGG	3 cut(s)	350, 446, 1691
AccBSI	CCGCTC	1 cut(s)	1945
AccI	GTMKAC	1 cut(s)	251
AccII	CGCG	3 cut(s)	1046, 1175, 1192
AciI	CCGC	9 cut(s)	234, 237, 281, 287, 1044, 1192, 1945, 2170, 2200
AclWI	GGATC	2 cut(s)	525, 2184
AcoI	YGGCCR	1 cut(s)	1676
AcsI	RAATTY	5 cut(s)	562, 618, 747, 1568, 1744
AcuI	CTGAAG	2 cut(s)	54, 642
AcyI	GRCGYC	1 cut(s)	531
AfaI	GTAC	2 cut(s)	960, 1949
AjnI	CCWGG	3 cut(s)	388, 676, 691
AleI	CACNNNNGTG	2 cut(s)	121, 275
Alw21I	GWGCWC	3 cut(s)	1620, 1667, 2160
Alw26I	GTCTC	1 cut(s)	2134
AlwI	GGATC	2 cut(s)	525, 2184
AlwNI	CAGNNNCTG	1 cut(s)	1715
Ama87I	CYCGRG	2 cut(s)	907, 954
AoxI	GGCC	5 cut(s)	6, 910, 1028, 1257, 1676
ApoI	RAATTY	5 cut(s)	562, 618, 747, 1568, 1744
ArsI	GACNNNNNNTTYG	2 cut(s)	2020, 2052
AspLEI	GCGC	4 cut(s)	533, 1177, 1192, 1776
AspS9I	GGNCC	4 cut(s)	341, 896, 910, 1768
AsuC2I	CCSGG	3 cut(s)	908, 909, 936
AsuHPI	GGTGA	9 cut(s)	78, 95, 378, 778, 1072, 1302, 1356, 1844, 2068
AvaI	CYCGRG	2 cut(s)	907, 954
AvaII	GGWCC	3 cut(s)	341, 896, 1768
AxyI	CCTNAGG	2 cut(s)	864, 2191
BalI	TGGCCA	1 cut(s)	1678
BanI	GGYRCC	1 cut(s)	530
BanII	GRGCYC	3 cut(s)	159, 1620, 1667
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbsI	GAAGAC	3 cut(s)	210, 441, 2139
Bbv12I	GWGCWC	3 cut(s)	1620, 1667, 2160
BccI	CCATC	3 cut(s)	114, 448, 1998
BceAI	ACGGC	3 cut(s)	244, 907, 1853
BcgI	CGANNNNNNTGC	4 cut(s)	796, 830, 1329, 1363
BciT130I	CCWGG	3 cut(s)	390, 678, 693
BciVI	GTATCC	1 cut(s)	1819
BcnI	CCSGG	3 cut(s)	908, 909, 936
BcoDI	GTCTC	1 cut(s)	2134
BfaI	CTAG	2 cut(s)	323, 1922
BfmI	CTRYAG	1 cut(s)	252
BfoI	RGCGCY	1 cut(s)	534
BfuAI	ACCTGC	1 cut(s)	308
BfuI	GTATCC	1 cut(s)	1819
Bme1390I	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
Bme18I	GGWCC	3 cut(s)	341, 896, 1768
BmeT110I	CYCGRG	2 cut(s)	907, 954
BmgT120I	GGNCC	4 cut(s)	341, 896, 910, 1768
BmiI	GGNNCC	3 cut(s)	291, 532, 898
BmrFI	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
BmrI	ACTGGG	2 cut(s)	373, 894
BmsI	GCATC	3 cut(s)	1548, 1894, 1915
BmuI	ACTGGG	2 cut(s)	373, 894
BpiI	GAAGAC	3 cut(s)	210, 441, 2139
BpmI	CTGGAG	1 cut(s)	2097
BpuEI	CTTGAG	3 cut(s)	1572, 1583, 1867
BpuMI	CCSGG	3 cut(s)	908, 909, 936
Bsa29I	ATCGAT	1 cut(s)	1446
BsaHI	GRCGYC	1 cut(s)	531
BsaJI	CCNNGG	4 cut(s)	676, 907, 1260, 1812
BsaWI	WCCGGW	2 cut(s)	884, 1830
BsaXI	ACNNNNNCTCC	4 cut(s)	1002, 1032, 1356, 1386
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	5 cut(s)	368, 900, 1031, 1367, 2114
Bse21I	CCTNAGG	2 cut(s)	864, 2191
Bse3DI	GCAATG	2 cut(s)	579, 1478
BseBI	CCWGG	3 cut(s)	390, 678, 693
BseCI	ATCGAT	1 cut(s)	1446
BseDI	CCNNGG	4 cut(s)	676, 907, 1260, 1812
BseGI	GGATG	4 cut(s)	200, 576, 739, 1404
BseMI	GCAATG	2 cut(s)	579, 1478
BseMII	CTCAG	7 cut(s)	144, 372, 800, 878, 1710, 2199, 2205
BseNI	ACTGG	5 cut(s)	368, 900, 1031, 1367, 2114
BseRI	GAGGAG	1 cut(s)	41
Bsh1236I	CGCG	3 cut(s)	1046, 1175, 1192
BshFI	GGCC	5 cut(s)	8, 912, 1030, 1259, 1678
BshNI	GGYRCC	1 cut(s)	530
BshVI	ATCGAT	1 cut(s)	1446
BsiHKAI	GWGCWC	3 cut(s)	1620, 1667, 2160
BsiHKCI	CYCGRG	2 cut(s)	907, 954
BsiSI	CCGG	6 cut(s)	273, 293, 885, 908, 935, 1831
BslFI	GGGAC	1 cut(s)	2068
BsmAI	GTCTC	1 cut(s)	2134
BsmFI	GGGAC	1 cut(s)	2068
BsnI	GGCC	5 cut(s)	8, 912, 1030, 1259, 1678
BsoBI	CYCGRG	2 cut(s)	907, 954
Bsp1286I	GDGCHC	4 cut(s)	159, 1620, 1667, 2160
Bsp143I	GATC	3 cut(s)	517, 1149, 2176
BspACI	CCGC	9 cut(s)	234, 237, 281, 287, 1044, 1192, 1945, 2170, 2200
BspANI	GGCC	5 cut(s)	8, 912, 1030, 1259, 1678
BspCNI	CTCAG	7 cut(s)	145, 373, 799, 877, 1709, 2198, 2204
BspDI	ATCGAT	1 cut(s)	1446
BspFNI	CGCG	3 cut(s)	1046, 1175, 1192
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	3 cut(s)	291, 532, 898
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	2 cut(s)	525, 2184
BspQI	GCTCTTC	1 cut(s)	1558
BspT107I	GGYRCC	1 cut(s)	530
BsrBI	CCGCTC	1 cut(s)	1945
BsrDI	GCAATG	2 cut(s)	579, 1478
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	5 cut(s)	368, 900, 1031, 1367, 2114
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	4 cut(s)	676, 907, 1260, 1812
BssMI	GATC	3 cut(s)	517, 1149, 2176
BssNI	GRCGYC	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	1260, 1812
Bst2UI	CCWGG	3 cut(s)	390, 678, 693
Bst4CI	ACNGT	3 cut(s)	646, 1877, 2145
Bst6I	CTCTTC	4 cut(s)	211, 1300, 1558, 2132
BstACI	GRCGYC	1 cut(s)	531
BstC8I	GCNNGC	3 cut(s)	600, 1578, 2165
BstDEI	CTNAG	8 cut(s)	153, 381, 410, 786, 864, 1696, 2185, 2191
BstEII	GGTNACC	1 cut(s)	101
BstENI	CCTNNNNNAGG	1 cut(s)	1816
BstF5I	GGATG	4 cut(s)	200, 576, 739, 1404
BstFNI	CGCG	3 cut(s)	1046, 1175, 1192
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	4 cut(s)	533, 1177, 1192, 1776
BstKTI	GATC	3 cut(s)	520, 1152, 2179
BstMAI	GTCTC	1 cut(s)	2134
BstMBI	GATC	3 cut(s)	517, 1149, 2176
BstNI	CCWGG	3 cut(s)	390, 678, 693
BstPI	GGTNACC	1 cut(s)	101
BstSCI	CCNGG	6 cut(s)	388, 676, 691, 906, 907, 934
BstSFI	CTRYAG	1 cut(s)	252
BstUI	CGCG	3 cut(s)	1046, 1175, 1192
BstV2I	GAAGAC	3 cut(s)	210, 441, 2139
BstX2I	RGATCY	1 cut(s)	2176
BstXI	CCANNNNNNTGG	3 cut(s)	123, 277, 1804
BstYI	RGATCY	1 cut(s)	2176
Bsu15I	ATCGAT	1 cut(s)	1446
Bsu36I	CCTNAGG	2 cut(s)	864, 2191
BsuI	GTATCC	1 cut(s)	1819
BsuRI	GGCC	5 cut(s)	8, 912, 1030, 1259, 1678
BsuTUI	ATCGAT	1 cut(s)	1446
BtgZI	GCGATG	1 cut(s)	821
BtsCI	GGATG	4 cut(s)	200, 576, 739, 1404
BtsI	GCAGTG	2 cut(s)	1536, 1831
BtsIMutI	CAGTG	6 cut(s)	150, 666, 818, 1536, 1831, 1873
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	3 cut(s)	600, 1578, 2165
CaiI	CAGNNNCTG	1 cut(s)	1715
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	4 cut(s)	533, 1177, 1192, 1776
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	4 cut(s)	341, 896, 910, 1768
Cfr9I	CCCGGG	1 cut(s)	907
ClaI	ATCGAT	1 cut(s)	1446
CsiI	ACCWGGT	1 cut(s)	388
Csp6I	GTAC	2 cut(s)	959, 1948
CviAII	CATG	6 cut(s)	10, 503, 1279, 1439, 1691, 2129
CviQI	GTAC	2 cut(s)	959, 1948
DdeI	CTNAG	8 cut(s)	153, 381, 410, 786, 864, 1696, 2185, 2191
DinI	GGCGCC	1 cut(s)	532
DpnI	GATC	3 cut(s)	519, 1151, 2178
DpnII	GATC	3 cut(s)	517, 1149, 2176
DrdI	GACNNNNNNGTC	1 cut(s)	1130
DseDI	GACNNNNNNGTC	1 cut(s)	1130
EaeI	YGGCCR	1 cut(s)	1676
Eam1104I	CTCTTC	4 cut(s)	211, 1300, 1558, 2132
EarI	CTCTTC	4 cut(s)	211, 1300, 1558, 2132
Ecl136II	GAGCTC	2 cut(s)	1618, 1665
Eco130I	CCWWGG	2 cut(s)	1260, 1812
Eco147I	AGGCCT	1 cut(s)	1259
Eco24I	GRGCYC	3 cut(s)	159, 1620, 1667
Eco32I	GATATC	1 cut(s)	1840
Eco47I	GGWCC	3 cut(s)	341, 896, 1768
Eco53kI	GAGCTC	2 cut(s)	1618, 1665
Eco57I	CTGAAG	2 cut(s)	54, 642
Eco81I	CCTNAGG	2 cut(s)	864, 2191
Eco88I	CYCGRG	2 cut(s)	907, 954
Eco91I	GGTNACC	1 cut(s)	101
EcoICRI	GAGCTC	2 cut(s)	1618, 1665
EcoNI	CCTNNNNNAGG	1 cut(s)	1816
EcoO65I	GGTNACC	1 cut(s)	101
EcoRI	GAATTC	2 cut(s)	1568, 1744
EcoRII	CCWGG	3 cut(s)	388, 676, 691
EcoRV	GATATC	1 cut(s)	1840
EcoT14I	CCWWGG	2 cut(s)	1260, 1812
EcoT38I	GRGCYC	3 cut(s)	159, 1620, 1667
EgeI	GGCGCC	1 cut(s)	532
EheI	GGCGCC	1 cut(s)	532
ErhI	CCWWGG	2 cut(s)	1260, 1812
FaeI	CATG	6 cut(s)	13, 506, 1282, 1442, 1694, 2132
FalI	AAGNNNNNCTT	6 cut(s)	1225, 1257, 1244, 1276, 1392, 1424
FaqI	GGGAC	1 cut(s)	2068
FatI	CATG	6 cut(s)	9, 502, 1278, 1438, 1690, 2128
FauNDI	CATATG	1 cut(s)	762
FblI	GTMKAC	1 cut(s)	251
FokI	GGATG	4 cut(s)	187, 583, 746, 1391
FriOI	GRGCYC	3 cut(s)	159, 1620, 1667
FspBI	CTAG	2 cut(s)	323, 1922
GlaI	GCGC	4 cut(s)	532, 1176, 1191, 1775
GsuI	CTGGAG	1 cut(s)	2097
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	5 cut(s)	8, 912, 1030, 1259, 1678
HapII	CCGG	6 cut(s)	273, 293, 885, 908, 935, 1831
HhaI	GCGC	4 cut(s)	533, 1177, 1192, 1776
Hin1I	GRCGYC	1 cut(s)	531
Hin1II	CATG	6 cut(s)	13, 506, 1282, 1442, 1694, 2132
Hin6I	GCGC	4 cut(s)	531, 1175, 1190, 1774
HinP1I	GCGC	4 cut(s)	531, 1175, 1190, 1774
HincII	GTYRAC	2 cut(s)	1123, 2061
HindII	GTYRAC	2 cut(s)	1123, 2061
HinfI	GANTC	9 cut(s)	65, 383, 772, 931, 1412, 1895, 2029, 2081, 2110
HpaII	CCGG	6 cut(s)	273, 293, 885, 908, 935, 1831
HphI	GGTGA	9 cut(s)	78, 95, 378, 778, 1072, 1302, 1356, 1844, 2068
Hpy166II	GTNNAC	8 cut(s)	252, 341, 664, 683, 1063, 1123, 1873, 2061
Hpy188I	TCNGA	6 cut(s)	64, 73, 382, 616, 1357, 1699
Hpy8I	GTNNAC	8 cut(s)	252, 341, 664, 683, 1063, 1123, 1873, 2061
HpyCH4III	ACNGT	3 cut(s)	646, 1877, 2145
HpyCH4IV	ACGT	1 cut(s)	824
HpyF3I	CTNAG	8 cut(s)	153, 381, 410, 786, 864, 1696, 2185, 2191
HpySE526I	ACGT	1 cut(s)	824
Hsp92I	GRCGYC	1 cut(s)	531
Hsp92II	CATG	6 cut(s)	13, 506, 1282, 1442, 1694, 2132
HspAI	GCGC	4 cut(s)	531, 1175, 1190, 1774
KasI	GGCGCC	1 cut(s)	530
Kzo9I	GATC	3 cut(s)	517, 1149, 2176
LguI	GCTCTTC	1 cut(s)	1558
LmnI	GCTCC	2 cut(s)	295, 1959
LweI	GCATC	3 cut(s)	1548, 1894, 1915
MabI	ACCWGGT	1 cut(s)	388
MaeI	CTAG	2 cut(s)	323, 1922
MaeII	ACGT	1 cut(s)	824
MaeIII	GTNAC	8 cut(s)	101, 384, 425, 902, 1167, 1308, 1826, 1877
MalI	GATC	3 cut(s)	519, 1151, 2178
MbiI	CCGCTC	1 cut(s)	1945
MboI	GATC	3 cut(s)	517, 1149, 2176
MfeI	CAATTG	3 cut(s)	716, 833, 1728
MflI	RGATCY	1 cut(s)	2176
MhlI	GDGCHC	4 cut(s)	159, 1620, 1667, 2160
MlsI	TGGCCA	1 cut(s)	1678
MluNI	TGGCCA	1 cut(s)	1678
Mly113I	GGCGCC	1 cut(s)	531
MlyI	GAGTC	4 cut(s)	392, 2023, 2090, 2104
MmeI	TCCRAC	3 cut(s)	727, 1045, 1981
Mox20I	TGGCCA	1 cut(s)	1678
MscI	TGGCCA	1 cut(s)	1678
MseI	TTAA	5 cut(s)	792, 1275, 1428, 1502, 1782
MslI	CAYNNNNRTG	3 cut(s)	121, 275, 1546
Msp20I	TGGCCA	1 cut(s)	1678
MspA1I	CMGCKG	2 cut(s)	234, 2170
MspI	CCGG	6 cut(s)	273, 293, 885, 908, 935, 1831
MspR9I	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
MunI	CAATTG	3 cut(s)	716, 833, 1728
MvaI	CCWGG	3 cut(s)	390, 678, 693
MvnI	CGCG	3 cut(s)	1046, 1175, 1192
NarI	GGCGCC	1 cut(s)	531
NciI	CCSGG	3 cut(s)	908, 909, 936
NdeI	CATATG	1 cut(s)	762
NdeII	GATC	3 cut(s)	517, 1149, 2176
NlaIII	CATG	6 cut(s)	13, 506, 1282, 1442, 1694, 2132
NlaIV	GGNNCC	3 cut(s)	291, 532, 898
NmeAIII	GCCGAG	1 cut(s)	2116
NmuCI	GTSAC	5 cut(s)	101, 384, 425, 1308, 1826
OliI	CACNNNNGTG	2 cut(s)	121, 275
PagI	TCATGA	1 cut(s)	502
PceI	AGGCCT	1 cut(s)	1259
PciSI	GCTCTTC	1 cut(s)	1558
PcsI	WCGNNNNNNNCGW	1 cut(s)	1569
PfeI	GAWTC	5 cut(s)	65, 772, 931, 1412, 1895
PflMI	CCANNNNNTGG	3 cut(s)	350, 446, 1691
PleI	GAGTC	4 cut(s)	391, 2023, 2089, 2104
PluTI	GGCGCC	1 cut(s)	534
PpsI	GAGTC	4 cut(s)	391, 2023, 2089, 2104
Psp124BI	GAGCTC	2 cut(s)	1620, 1667
Psp6I	CCWGG	3 cut(s)	388, 676, 691
PspEI	GGTNACC	1 cut(s)	101
PspGI	CCWGG	3 cut(s)	388, 676, 691
PspN4I	GGNNCC	3 cut(s)	291, 532, 898
PspPI	GGNCC	4 cut(s)	341, 896, 910, 1768
PstNI	CAGNNNCTG	1 cut(s)	1715
PsuI	RGATCY	1 cut(s)	2176
RsaI	GTAC	2 cut(s)	960, 1949
RsaNI	GTAC	2 cut(s)	959, 1948
RseI	CAYNNNNRTG	3 cut(s)	121, 275, 1546
SacI	GAGCTC	2 cut(s)	1620, 1667
SapI	GCTCTTC	1 cut(s)	1558
SaqAI	TTAA	5 cut(s)	792, 1275, 1428, 1502, 1782
Sau3AI	GATC	3 cut(s)	517, 1149, 2176
Sau96I	GGNCC	4 cut(s)	341, 896, 910, 1768
SchI	GAGTC	4 cut(s)	392, 2023, 2090, 2104
ScrFI	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
SduI	GDGCHC	4 cut(s)	159, 1620, 1667, 2160
SexAI	ACCWGGT	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	1548, 1894, 1915
SfcI	CTRYAG	1 cut(s)	252
SfoI	GGCGCC	1 cut(s)	532
SgrAI	CRCCGGYG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	341, 896, 1768
SmaI	CCCGGG	1 cut(s)	909
SmiMI	CAYNNNNRTG	3 cut(s)	121, 275, 1546
SmlI	CTYRAG	3 cut(s)	1587, 1598, 1882
SmoI	CTYRAG	3 cut(s)	1587, 1598, 1882
SseBI	AGGCCT	1 cut(s)	1259
SsiI	CCGC	9 cut(s)	234, 237, 281, 287, 1044, 1192, 1945, 2170, 2200
SspDI	GGCGCC	1 cut(s)	530
SspMI	CTAG	2 cut(s)	323, 1922
SstI	GAGCTC	2 cut(s)	1620, 1667
StuI	AGGCCT	1 cut(s)	1259
StyD4I	CCNGG	6 cut(s)	388, 676, 691, 906, 907, 934
StyI	CCWWGG	2 cut(s)	1260, 1812
TaaI	ACNGT	3 cut(s)	646, 1877, 2145
TaiI	ACGT	1 cut(s)	827
TaqI	TCGA	6 cut(s)	171, 1152, 1446, 1556, 1572, 1638
TauI	GCSGC	5 cut(s)	237, 284, 290, 1046, 1195
TfiI	GAWTC	5 cut(s)	65, 772, 931, 1412, 1895
Tru1I	TTAA	5 cut(s)	792, 1275, 1428, 1502, 1782
Tru9I	TTAA	5 cut(s)	792, 1275, 1428, 1502, 1782
TscAI	CASTG	6 cut(s)	157, 666, 825, 1543, 1831, 1880
TseFI	GTSAC	5 cut(s)	101, 384, 425, 1308, 1826
Tsp45I	GTSAC	5 cut(s)	101, 384, 425, 1308, 1826
TspDTI	ATGAA	8 cut(s)	17, 491, 785, 1097, 1106, 1295, 1581, 1679
TspGWI	ACGGA	3 cut(s)	990, 1155, 2122
TspMI	CCCGGG	1 cut(s)	907
TspRI	CASTG	6 cut(s)	157, 666, 825, 1543, 1831, 1880
Van91I	CCANNNNNTGG	3 cut(s)	350, 446, 1691
VpaK11BI	GGWCC	3 cut(s)	341, 896, 1768
XagI	CCTNNNNNAGG	1 cut(s)	1816
XapI	RAATTY	5 cut(s)	562, 618, 747, 1568, 1744
XbaI	TCTAGA	1 cut(s)	322
XmaI	CCCGGG	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	251
XspI	CTAG	2 cut(s)	323, 1922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.