Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0011010

Physical Location & Seq

Genomic Coordinates Forward (+)

40409532 .. 40411451

Gene Structure 1920 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0289000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGTCTCTTAAAGCCGGCTGCAGGAAGGCAACCTTTAGTCTCTTCATTTTCATCAACTTTCTTTCTCTCTTTGCTCATCCAACTTCATTTAGTATACCTCACTTCAACCCTGATACAGAGAACATACTCTACCAAGGCAATGCCAAGTTTAAGTCGGGAAATGTTGAATTCAACCCAAACCTTGACATATTTCGTGTAGGGCGGTGTACTTATTCAAAACCTTTCCACCTTTGGGACTCTACTACCAAAGCTCGGTCACTGTCAAACTTCACTACCAACTTCACATTCATGATGGACACTAATAGCCAAAATAACTTCACTGATGGATTTGCCTTTTTCCTTGCACCTTTTGGCTATCCAATTCCGCCTAACTCAGCCGGGGGTGATCTAGGACTGTTCAACATCACCAATCATTTCGAGACGTCCCAAAACAAAGTTGTCCTGGTTGAGTTTGATAGCTACACAAACGAATGGGATCCTGAGGGACCTCATGTTGGGATCAATGTAAATAGTATTTCATCGGTCGTCAATGATAGGTGGGATTTTAACGTCACGAGATCAAGAAATGTGATATCTGCACAAGTAACTTTTGATGCTAGCACCTACATGCTGACTGTGTTTTGGACATACAATGAAGCTACGAGGTATGATAATTCTCTTTCTTTGAAAATCGACCTGCGAGATGTTCTTCCCGAAAAGGTTGCGTTTGGTTTCTCAGCTACTACTGGAACATACCCGGAAAACCTTATTATATCTACATGGGAGTTCACTTCAGATTTAGATTCTGATGATAAAAGCAGGAAAGGGAAGCGTGCAATATTCTTGATAGTGGCGATAACTGCAGTTACTTTCTTCATTTTAATGCTTAGTGTGGCCTTATGTTGGCGCGTAACAAAGATCAAAAGACAGGAAAATGTTTGCTCCAATGCTGCAGTACCTTCTATAAGTAAGCATCTTGAGACACTAGCCTTTCCAAGACGATTTTCTTACCAAGAATTAGTTGCAGCTACCTTTGGCTTTGCAAATGACAGAAGGCTAGGCCATGGAGGGTCAGGACAAGTTTATAGAGGAGTCCTACAGGATCTAGGCTGCTCGGTTGCTGTGAAGCGAATCTTTGCCGACTCTGAGCACTATGAGAAAGTTTTCATCAATGAAGTGAAAATCATAAGCCGCTTGATACATAAAAACTTGGTGATGTTTATAGGATGGTGTCATGAGCAAGGCGAATGTTTACTTGTTTATGCTTACATGCCAAATAGCAGCCTTGATGCTCATCTTTTTGGCCCCAGAACAACGCTGCAATGGAATTTCAGGTACAGGATAGCTTTGGGCTTGGCCTCAGCGCTTCATTATCTACACGAAGATGCAGAGCAGTGCATCCTTCATAGGGATATTAAATCAGCAAATGTACTTTTGGACAACGATTTTAACACTAAGCTCGGTGATTTTGGGATTGCTAAGCTCTTGGATCCTCACTTGAGGACTAGGACAACCGGGGTGGCAGGGACTTTTGGATACATGGCCCCGGAATATGCTTTTCAAGGGAGAGCAAGCAAGGAATCGGACATGTTCAGTTTTGGAGTTGTGGTTTTGGAAATTGCTTGTGGAAGGCGAACTTACCAAGATGGAGAATATCACGTGCCACTTTTTGAGTGGGTTTGGCAATCGTACATTGCAGGAAATCTTCTCGATGTAGCTGATGAGACATTGGATATGGAGTTTGATCCAAGTGAAATGAAGTGCTTGCTAATTGTGGGATTATGGTGCACGCACCCCAGCAACAAGGAGAGGCCTAAAGCAGGACAAGTCATGAAGGTTCTTCAGCTGGAAGCACCATTGCCGCAACTTGCACGTGATAGGCATCATGATCATCATCAATATAATGACTCTGTACCACCTGATCGTGGAACAATCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1900618 GO:1901371 GO:1903506 GO:1905421 GO:2000024 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

639

Amino Acids

72.42

Weight (kDa)

6.24

Isoelectric Point (pI)

37.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	28 - 266	1.1e-58	Legume lectin domain
Lectin_L-type_dom	PF18483	85 - 245	2.8e-06	Legume lectin beta-barrel domain
Pkinase	PF00069	341 - 604	1.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	343 - 542	4.9e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61970
fragaria_vesca	FvH4_7g17930
malus_domestica	MD01G1091800.v1.1 MD07G1162400.v1.1
prunus_persica	Prupe.2G201000_v2.0.a1 Prupe.2G201000_v2.0.a1 Prupe.2G201000_v2.0.a1
pyrus_communis	pycom01g11570 pycom07g15750
rosa_chinensis	RchiOBHm_Chr1g0361371
rosa_laevigata	RLG00000027721
rosa_multiflora	Rmu_sc0002119.1_g000023 Rmu_sc0027344.1_g000001
rosa_roxburghii	Rroxscaffold_4G00295010
rosa_rugosa	Rorug01G0289000
rosa_samantha	Rh1AG299900 Rh1BG263600 Rh1CG281200 Rh1DG293600
rosa_wichuraiana	Rw1G026550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	425
Acc36I	ACCTGC	1 cut(s)	684
AccI	GTMKAC	1 cut(s)	94
AccII	CGCG	1 cut(s)	888
AciI	CCGC	4 cut(s)	202, 365, 1171, 1841
AclWI	GGATC	7 cut(s)	470, 483, 506, 1089, 1463, 1476, 1718
AcsI	RAATTY	2 cut(s)	167, 1306
AcuI	CTGAAG	2 cut(s)	756, 1805
AcvI	CACGTG	2 cut(s)	1639, 1853
AcyI	GRCGYC	1 cut(s)	422
AfaI	GTAC	6 cut(s)	208, 936, 1316, 1410, 1670, 1893
AfeI	AGCGCT	1 cut(s)	1344
AfiI	CCNNNNNNNGG	8 cut(s)	21, 232, 252, 494, 882, 1387, 1799, 1904
AflIII	ACRYGT	1 cut(s)	1566
AgsI	TTSAA	7 cut(s)	106, 167, 172, 216, 400, 667, 1541
AjnI	CCWGG	1 cut(s)	441
AjuI	GAANNNNNNNTTGG	4 cut(s)	269, 301, 967, 999
Alw21I	GWGCWC	2 cut(s)	1131, 1769
Alw26I	GTCTC	5 cut(s)	9, 44, 413, 953, 1697
Alw44I	GTGCAC	1 cut(s)	1765
AlwI	GGATC	7 cut(s)	470, 483, 506, 1089, 1463, 1476, 1718
Aor51HI	AGCGCT	1 cut(s)	1344
AoxI	GGCC	6 cut(s)	873, 1039, 1282, 1335, 1521, 1790
ApaLI	GTGCAC	1 cut(s)	1765
ApeKI	GCWGC	6 cut(s)	18, 929, 1004, 1089, 1260, 1297
ApoI	RAATTY	2 cut(s)	167, 1306
Asp700I	GAANNNNTTC	1 cut(s)	1142
AspLEI	GCGC	2 cut(s)	888, 1345
AspS9I	GGNCC	3 cut(s)	485, 1283, 1522
AsuC2I	CCSGG	4 cut(s)	379, 737, 1495, 1526
AsuHPI	GGTGA	4 cut(s)	395, 397, 1204, 1454
AsuNHI	GCTAGC	1 cut(s)	596
AvaII	GGWCC	1 cut(s)	485
AxyI	CCTNAGG	1 cut(s)	480
BaeGI	GKGCMC	1 cut(s)	1769
BamHI	GGATCC	2 cut(s)	475, 1468
BauI	CACGAG	1 cut(s)	553
BbrPI	CACGTG	2 cut(s)	1639, 1853
Bbv12I	GWGCWC	2 cut(s)	1131, 1769
BbvCI	CCTCAGC	1 cut(s)	1339
BbvI	GCAGC	6 cut(s)	5, 916, 1016, 1076, 1272, 1284
BccI	CCATC	4 cut(s)	286, 317, 1200, 1619
BcgI	CGANNNNNNTGC	2 cut(s)	683, 717
BciT130I	CCWGG	1 cut(s)	443
BciVI	GTATCC	1 cut(s)	1508
BclI	TGATCA	1 cut(s)	1867
BcnI	CCSGG	4 cut(s)	379, 737, 1495, 1526
BcoDI	GTCTC	5 cut(s)	9, 44, 413, 953, 1697
BfaI	CTAG	6 cut(s)	389, 597, 965, 1037, 1085, 1485
BfmI	CTRYAG	4 cut(s)	19, 840, 930, 1076
BfoI	RGCGCY	1 cut(s)	1346
BfuAI	ACCTGC	1 cut(s)	684
BfuI	GTATCC	1 cut(s)	1508
BisI	GCNGC	8 cut(s)	19, 930, 1005, 1090, 1171, 1261, 1298, 1841
BlpI	GCTNAGC	1 cut(s)	1458
BlsI	GCNGC	8 cut(s)	20, 931, 1006, 1091, 1172, 1262, 1299, 1842
Bme1390I	CCNGG	5 cut(s)	379, 443, 737, 1495, 1526
Bme18I	GGWCC	1 cut(s)	485
BmgT120I	GGNCC	3 cut(s)	485, 1283, 1522
BmiI	GGNNCC	5 cut(s)	477, 486, 1285, 1470, 1524
BmrFI	CCNGG	5 cut(s)	379, 443, 737, 1495, 1526
BmsI	GCATC	6 cut(s)	583, 961, 1258, 1354, 1386, 1870
BmtI	GCTAGC	1 cut(s)	600
Bpu10I	CCTNAGC	1 cut(s)	1339
Bpu1102I	GCTNAGC	1 cut(s)	1458
BpuEI	CTTGAG	2 cut(s)	977, 1498
BpuMI	CCSGG	4 cut(s)	379, 737, 1495, 1526
BsaAI	YACGTR	2 cut(s)	1639, 1853
BsaBI	GATNNNNATC	3 cut(s)	1272, 1860, 1872
BsaHI	GRCGYC	1 cut(s)	422
BsaJI	CCNNGG	5 cut(s)	133, 378, 1042, 1494, 1524
BsaXI	ACNNNNNCTCC	2 cut(s)	1572, 1602
Bsc4I	CCNNNNNNNGG	8 cut(s)	21, 232, 252, 494, 882, 1387, 1799, 1904
Bse118I	RCCGGY	1 cut(s)	14
Bse1I	ACTGG	1 cut(s)	730
Bse21I	CCTNAGG	1 cut(s)	480
Bse3DI	GCAATG	4 cut(s)	145, 1307, 1671, 1835
Bse8I	GATNNNNATC	3 cut(s)	1272, 1860, 1872
BseBI	CCWGG	1 cut(s)	443
BseDI	CCNNGG	5 cut(s)	133, 378, 1042, 1494, 1524
BseGI	GGATG	3 cut(s)	76, 1211, 1377
BseJI	GATNNNNATC	3 cut(s)	1272, 1860, 1872
BseLI	CCNNNNNNNGG	8 cut(s)	21, 232, 252, 494, 882, 1387, 1799, 1904
BseMI	GCAATG	4 cut(s)	145, 1307, 1671, 1835
BseMII	CTCAG	5 cut(s)	387, 471, 729, 1116, 1353
BseNI	ACTGG	1 cut(s)	730
BseRI	GAGGAG	1 cut(s)	1083
BseSI	GKGCMC	1 cut(s)	1769
BseXI	GCAGC	6 cut(s)	5, 916, 1016, 1076, 1272, 1284
BseYI	CCCAGC	1 cut(s)	1775
BsgI	GTGCAG	1 cut(s)	561
Bsh1236I	CGCG	1 cut(s)	888
Bsh1285I	CGRYCG	1 cut(s)	525
BshFI	GGCC	6 cut(s)	875, 1041, 1284, 1337, 1523, 1792
BsiEI	CGRYCG	1 cut(s)	525
BsiHKAI	GWGCWC	2 cut(s)	1131, 1769
BsiSI	CCGG	5 cut(s)	15, 378, 737, 1494, 1526
BslFI	GGGAC	4 cut(s)	248, 409, 498, 1519
BslI	CCNNNNNNNGG	8 cut(s)	21, 232, 252, 494, 882, 1387, 1799, 1904
BsmAI	GTCTC	5 cut(s)	9, 44, 413, 953, 1697
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	4 cut(s)	248, 409, 498, 1519
BsnI	GGCC	6 cut(s)	875, 1041, 1284, 1337, 1523, 1792
Bsp1286I	GDGCHC	2 cut(s)	1131, 1769
Bsp1720I	GCTNAGC	1 cut(s)	1458
Bsp19I	CCATGG	1 cut(s)	1042
BspACI	CCGC	4 cut(s)	202, 365, 1171, 1841
BspANI	GGCC	6 cut(s)	875, 1041, 1284, 1337, 1523, 1792
BspCNI	CTCAG	5 cut(s)	386, 472, 728, 1117, 1352
BspFNI	CGCG	1 cut(s)	888
BspHI	TCATGA	4 cut(s)	288, 1213, 1809, 1864
BspLI	GGNNCC	5 cut(s)	477, 486, 1285, 1470, 1524
BspMAI	CTGCAG	3 cut(s)	23, 844, 934
BspMI	ACCTGC	1 cut(s)	684
BspOI	GCTAGC	1 cut(s)	600
BspPI	GGATC	7 cut(s)	470, 483, 506, 1089, 1463, 1476, 1718
BsrDI	GCAATG	4 cut(s)	145, 1307, 1671, 1835
BsrFI	RCCGGY	1 cut(s)	14
BsrI	ACTGG	1 cut(s)	730
BssAI	RCCGGY	1 cut(s)	14
BssECI	CCNNGG	5 cut(s)	133, 378, 1042, 1494, 1524
BssNAI	GTATAC	1 cut(s)	95
BssNI	GRCGYC	1 cut(s)	422
BssSI	CACGAG	1 cut(s)	553
BssT1I	CCWWGG	2 cut(s)	133, 1042
Bst1107I	GTATAC	1 cut(s)	95
Bst2BI	CACGAG	1 cut(s)	553
Bst2UI	CCWGG	1 cut(s)	443
Bst4CI	ACNGT	3 cut(s)	261, 396, 616
Bst6I	CTCTTC	1 cut(s)	47
BstACI	GRCGYC	1 cut(s)	422
BstBAI	YACGTR	2 cut(s)	1639, 1853
BstC8I	GCNNGC	6 cut(s)	16, 598, 813, 1552, 1745, 1769
BstDEI	CTNAG	8 cut(s)	373, 480, 715, 866, 1125, 1339, 1434, 1458
BstDSI	CCRYGG	1 cut(s)	1042
BstENI	CCTNNNNNAGG	1 cut(s)	1797
BstF5I	GGATG	3 cut(s)	76, 1211, 1377
BstFNI	CGCG	1 cut(s)	888
BstH2I	RGCGCY	1 cut(s)	1346
BstHHI	GCGC	2 cut(s)	888, 1345
BstMAI	GTCTC	5 cut(s)	9, 44, 413, 953, 1697
BstMCI	CGRYCG	1 cut(s)	525
BstMWI	GCNNNNNNNGC	1 cut(s)	839
BstNI	CCWGG	1 cut(s)	443
BstNSI	RCATGY	3 cut(s)	610, 1252, 1570
BstSCI	CCNGG	5 cut(s)	377, 441, 735, 1493, 1524
BstSFI	CTRYAG	4 cut(s)	19, 840, 930, 1076
BstSLI	GKGCMC	1 cut(s)	1769
BstUI	CGCG	1 cut(s)	888
BstV1I	GCAGC	6 cut(s)	5, 916, 1016, 1076, 1272, 1284
BstX2I	RGATCY	3 cut(s)	475, 1081, 1468
BstYI	RGATCY	3 cut(s)	475, 1081, 1468
BstZ17I	GTATAC	1 cut(s)	95
Bsu36I	CCTNAGG	1 cut(s)	480
BsuI	GTATCC	1 cut(s)	1508
BsuRI	GGCC	6 cut(s)	875, 1041, 1284, 1337, 1523, 1792
BtgI	CCRYGG	1 cut(s)	1042
BtsCI	GGATG	3 cut(s)	76, 1211, 1377
BtsI	GCAGTG	1 cut(s)	1379
BtsIMutI	CAGTG	3 cut(s)	257, 318, 1379
BveI	ACCTGC	1 cut(s)	684
Cac8I	GCNNGC	6 cut(s)	16, 598, 813, 1552, 1745, 1769
CciI	TCATGA	4 cut(s)	288, 1213, 1809, 1864
CfoI	GCGC	2 cut(s)	888, 1345
Cfr10I	RCCGGY	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	485, 1283, 1522
Csp6I	GTAC	6 cut(s)	207, 935, 1315, 1409, 1669, 1892
CspCI	CAANNNNNGTGG	2 cut(s)	1479, 1514
CviQI	GTAC	6 cut(s)	207, 935, 1315, 1409, 1669, 1892
DdeI	CTNAG	8 cut(s)	373, 480, 715, 866, 1125, 1339, 1434, 1458
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
EciI	GGCGGA	1 cut(s)	354
Eco130I	CCWWGG	2 cut(s)	133, 1042
Eco147I	AGGCCT	1 cut(s)	1792
Eco32I	GATATC	1 cut(s)	573
Eco47I	GGWCC	1 cut(s)	485
Eco47III	AGCGCT	1 cut(s)	1344
Eco57I	CTGAAG	2 cut(s)	756, 1805
Eco72I	CACGTG	2 cut(s)	1639, 1853
Eco81I	CCTNAGG	1 cut(s)	480
EcoNI	CCTNNNNNAGG	1 cut(s)	1797
EcoO109I	RGGNCCY	1 cut(s)	485
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	1 cut(s)	441
EcoRV	GATATC	1 cut(s)	573
EcoT14I	CCWWGG	2 cut(s)	133, 1042
ErhI	CCWWGG	2 cut(s)	133, 1042
Esp3I	CGTCTC	1 cut(s)	413
FalI	AAGNNNNNCTT	6 cut(s)	17, 49, 1097, 1129, 1600, 1632
FaqI	GGGAC	4 cut(s)	248, 409, 498, 1519
FbaI	TGATCA	1 cut(s)	1867
FblI	GTMKAC	1 cut(s)	94
Fnu4HI	GCNGC	8 cut(s)	19, 930, 1005, 1090, 1171, 1261, 1298, 1841
FokI	GGATG	3 cut(s)	63, 1218, 1364
Fsp4HI	GCNGC	8 cut(s)	19, 930, 1005, 1090, 1171, 1261, 1298, 1841
FspBI	CTAG	6 cut(s)	389, 597, 965, 1037, 1085, 1485
GlaI	GCGC	2 cut(s)	887, 1344
GluI	GCNGC	8 cut(s)	19, 930, 1005, 1090, 1171, 1261, 1298, 1841
GsaI	CCCAGC	1 cut(s)	1779
HaeII	RGCGCY	1 cut(s)	1346
HaeIII	GGCC	6 cut(s)	875, 1041, 1284, 1337, 1523, 1792
HapII	CCGG	5 cut(s)	15, 378, 737, 1494, 1526
HhaI	GCGC	2 cut(s)	888, 1345
Hin1I	GRCGYC	1 cut(s)	422
Hin6I	GCGC	2 cut(s)	886, 1343
HinP1I	GCGC	2 cut(s)	886, 1343
HinfI	GANTC	7 cut(s)	236, 782, 1071, 1110, 1121, 1559, 1886
HpaII	CCGG	5 cut(s)	15, 378, 737, 1494, 1526
HphI	GGTGA	4 cut(s)	395, 397, 1204, 1454
Hpy166II	GTNNAC	5 cut(s)	95, 207, 768, 1232, 1767
Hpy188I	TCNGA	4 cut(s)	775, 787, 1126, 1564
Hpy8I	GTNNAC	5 cut(s)	95, 207, 768, 1232, 1767
HpyAV	CCTTC	6 cut(s)	19, 948, 1026, 1391, 1602, 1807
HpyCH4III	ACNGT	3 cut(s)	261, 396, 616
HpyCH4IV	ACGT	4 cut(s)	422, 549, 1638, 1852
HpyF10VI	GCNNNNNNNGC	1 cut(s)	839
HpyF3I	CTNAG	8 cut(s)	373, 480, 715, 866, 1125, 1339, 1434, 1458
HpySE526I	ACGT	4 cut(s)	422, 549, 1638, 1852
Hsp92I	GRCGYC	1 cut(s)	422
HspAI	GCGC	2 cut(s)	886, 1343
KroI	GCCGGC	1 cut(s)	14
KroNI	GCCGGC	1 cut(s)	16
Ksp22I	TGATCA	1 cut(s)	1867
LmnI	GCTCC	1 cut(s)	926
Lsp1109I	GCAGC	6 cut(s)	5, 916, 1016, 1076, 1272, 1284
LweI	GCATC	6 cut(s)	583, 961, 1258, 1354, 1386, 1870
MaeI	CTAG	6 cut(s)	389, 597, 965, 1037, 1085, 1485
MaeII	ACGT	4 cut(s)	422, 549, 1638, 1852
MaeIII	GTNAC	5 cut(s)	255, 550, 583, 844, 889
MboII	GAAGA	6 cut(s)	34, 680, 844, 1373, 1676, 1811
MflI	RGATCY	3 cut(s)	475, 1081, 1468
MhlI	GDGCHC	2 cut(s)	1131, 1769
MluCI	AATT	7 cut(s)	167, 360, 652, 995, 1306, 1596, 1749
MlyI	GAGTC	4 cut(s)	230, 1080, 1115, 1880
MmeI	TCCRAC	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	14
MroXI	GAANNNNTTC	1 cut(s)	1142
MseI	TTAA	6 cut(s)	9, 150, 546, 860, 1395, 1428
MslI	CAYNNNNRTG	4 cut(s)	287, 605, 860, 1362
MspA1I	CMGCKG	1 cut(s)	1825
MspI	CCGG	5 cut(s)	15, 378, 737, 1494, 1526
MspR9I	CCNGG	5 cut(s)	379, 443, 737, 1495, 1526
MvaI	CCWGG	1 cut(s)	443
MvnI	CGCG	1 cut(s)	888
MwoI	GCNNNNNNNGC	1 cut(s)	839
NaeI	GCCGGC	1 cut(s)	16
NciI	CCSGG	4 cut(s)	379, 737, 1495, 1526
NcoI	CCATGG	1 cut(s)	1042
NgoMIV	GCCGGC	1 cut(s)	14
NheI	GCTAGC	1 cut(s)	596
NlaIV	GGNNCC	5 cut(s)	477, 486, 1285, 1470, 1524
NmuCI	GTSAC	2 cut(s)	255, 550
NspI	RCATGY	3 cut(s)	610, 1252, 1570
PagI	TCATGA	4 cut(s)	288, 1213, 1809, 1864
PceI	AGGCCT	1 cut(s)	1792
PciI	ACATGT	1 cut(s)	1566
PdiI	GCCGGC	1 cut(s)	16
PdmI	GAANNNNTTC	1 cut(s)	1142
PfeI	GAWTC	3 cut(s)	782, 1110, 1559
PkrI	GCNGC	8 cut(s)	20, 931, 1006, 1091, 1172, 1262, 1299, 1842
PleI	GAGTC	4 cut(s)	230, 1079, 1115, 1880
PmaCI	CACGTG	2 cut(s)	1639, 1853
PmlI	CACGTG	2 cut(s)	1639, 1853
PpsI	GAGTC	4 cut(s)	230, 1079, 1115, 1880
Ppu21I	YACGTR	2 cut(s)	1639, 1853
PpuMI	RGGWCCY	1 cut(s)	485
PscI	ACATGT	1 cut(s)	1566
Psp5II	RGGWCCY	1 cut(s)	485
Psp6I	CCWGG	1 cut(s)	441
PspCI	CACGTG	2 cut(s)	1639, 1853
PspFI	CCCAGC	1 cut(s)	1775
PspGI	CCWGG	1 cut(s)	441
PspN4I	GGNNCC	5 cut(s)	477, 486, 1285, 1470, 1524
PspPI	GGNCC	3 cut(s)	485, 1283, 1522
PspPPI	RGGWCCY	1 cut(s)	485
PsrI	GAACNNNNNNTAC	2 cut(s)	113, 145
PstI	CTGCAG	3 cut(s)	23, 844, 934
PsuI	RGATCY	3 cut(s)	475, 1081, 1468
PvuII	CAGCTG	1 cut(s)	1825
RsaI	GTAC	6 cut(s)	208, 936, 1316, 1410, 1670, 1893
RsaNI	GTAC	6 cut(s)	207, 935, 1315, 1409, 1669, 1892
RseI	CAYNNNNRTG	4 cut(s)	287, 605, 860, 1362
SaqAI	TTAA	6 cut(s)	9, 150, 546, 860, 1395, 1428
SatI	GCNGC	8 cut(s)	19, 930, 1005, 1090, 1171, 1261, 1298, 1841
Sau96I	GGNCC	3 cut(s)	485, 1283, 1522
SchI	GAGTC	4 cut(s)	230, 1080, 1115, 1880
ScrFI	CCNGG	5 cut(s)	379, 443, 737, 1495, 1526
SduI	GDGCHC	2 cut(s)	1131, 1769
SfaNI	GCATC	6 cut(s)	583, 961, 1258, 1354, 1386, 1870
SfcI	CTRYAG	4 cut(s)	19, 840, 930, 1076
SinI	GGWCC	1 cut(s)	485
SmiMI	CAYNNNNRTG	4 cut(s)	287, 605, 860, 1362
SmlI	CTYRAG	2 cut(s)	956, 1477
SmoI	CTYRAG	2 cut(s)	956, 1477
Sse9I	AATT	7 cut(s)	167, 360, 652, 995, 1306, 1596, 1749
SseBI	AGGCCT	1 cut(s)	1792
SsiI	CCGC	4 cut(s)	202, 365, 1171, 1841
SspI	AATATT	1 cut(s)	819
SspMI	CTAG	6 cut(s)	389, 597, 965, 1037, 1085, 1485
StuI	AGGCCT	1 cut(s)	1792
StyD4I	CCNGG	5 cut(s)	377, 441, 735, 1493, 1524
StyI	CCWWGG	2 cut(s)	133, 1042
TaaI	ACNGT	3 cut(s)	261, 396, 616
TaiI	ACGT	4 cut(s)	425, 552, 1641, 1855
TaqI	TCGA	3 cut(s)	417, 672, 1689
TaqII	GACCGA	2 cut(s)	243, 511
TasI	AATT	7 cut(s)	167, 360, 652, 995, 1306, 1596, 1749
TatI	WGTACW	2 cut(s)	206, 1408
TauI	GCSGC	2 cut(s)	1173, 1843
TfiI	GAWTC	3 cut(s)	782, 1110, 1559
Tru1I	TTAA	6 cut(s)	9, 150, 546, 860, 1395, 1428
Tru9I	TTAA	6 cut(s)	9, 150, 546, 860, 1395, 1428
TscAI	CASTG	3 cut(s)	264, 325, 1379
TseFI	GTSAC	2 cut(s)	255, 550
TseI	GCWGC	6 cut(s)	18, 929, 1004, 1089, 1260, 1297
Tsp45I	GTSAC	2 cut(s)	255, 550
TspRI	CASTG	3 cut(s)	264, 325, 1379
VneI	GTGCAC	1 cut(s)	1765
VpaK11BI	GGWCC	1 cut(s)	485
XagI	CCTNNNNNAGG	1 cut(s)	1797
XapI	RAATTY	2 cut(s)	167, 1306
XceI	RCATGY	3 cut(s)	610, 1252, 1570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1650
XmiI	GTMKAC	1 cut(s)	94
XmnI	GAANNNNTTC	1 cut(s)	1142
XspI	CTAG	6 cut(s)	389, 597, 965, 1037, 1085, 1485
ZraI	GACGTC	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.