Rorug01G0320200

membrane-associated kinase regulator

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
43942888 .. 43943232
345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0320200.1

Sequence Viewer

Length: 345 bp
ATGGAAGGTGAGGTGTCAACATATGGTGATTTGTACAGCTTCGGCATTCTCTTCCTAGAGATTTTTTCAGGGAAGAAGCCCACTGATGAGATGTTCTGTGACAGCTCAAACTTTCGTAGTTATTGTAAGGCTGCTTTGTCAAAAGGAGTTGCAAAAATTGCAGATCCACTGCTTCTTCTAGAAGGCAAAGTAGCCGCAAACATTATCGGCGTAAGAAATGAAAAAATTGAAGAATGCTTGAGTGAGATCTTAAGAATTGGTATCGGGTGTTCTACTGAATCACCAAGAGACCGACTGGATATCAGAGATGTTGTATTTTCATTACGTTATATTAGGGAACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

114

Amino Acids

12.79

Weight (kDa)

5.23

Isoelectric Point (pI)

43.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 195
AclWI GGATC 1 cut(s) 158
AfaI GTAC 1 cut(s) 35
AflII CTTAAG 1 cut(s) 250
AgsI TTSAA 1 cut(s) 230
AluBI AGCT 2 cut(s) 39, 105
AluI AGCT 2 cut(s) 39, 105
Alw26I GTCTC 1 cut(s) 282
AlwI GGATC 1 cut(s) 158
ApeKI GCWGC 1 cut(s) 131
AsuHPI GGTGA 3 cut(s) 20, 38, 273
BbvI GCAGC 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 282
BfaI CTAG 2 cut(s) 56, 179
BfrI CTTAAG 1 cut(s) 250
BglII AGATCT 1 cut(s) 246
BisI GCNGC 2 cut(s) 132, 195
BlsI GCNGC 2 cut(s) 133, 196
BpuEI CTTGAG 1 cut(s) 259
BsaI GGTCTC 1 cut(s) 282
Bse1I ACTGG 1 cut(s) 300
BseNI ACTGG 1 cut(s) 300
BseXI GCAGC 1 cut(s) 118
BsmAI GTCTC 1 cut(s) 282
BsmI GAATGC 2 cut(s) 45, 239
Bso31I GGTCTC 1 cut(s) 282
Bsp1407I TGTACA 1 cut(s) 33
Bsp143I GATC 2 cut(s) 163, 246
BspACI CCGC 1 cut(s) 195
BspPI GGATC 1 cut(s) 158
BspTI CTTAAG 1 cut(s) 250
BspTNI GGTCTC 1 cut(s) 282
BsrGI TGTACA 1 cut(s) 33
BsrI ACTGG 1 cut(s) 300
BssMI GATC 2 cut(s) 163, 246
Bst6I CTCTTC 1 cut(s) 56
BstAFI CTTAAG 1 cut(s) 250
BstAPI GCANNNNNTGC 1 cut(s) 158
BstAUI TGTACA 1 cut(s) 33
BstKTI GATC 2 cut(s) 166, 249
BstMAI GTCTC 1 cut(s) 282
BstMBI GATC 2 cut(s) 163, 246
BstMWI GCNNNNNNNGC 1 cut(s) 158
BstV1I GCAGC 1 cut(s) 118
BstX2I RGATCY 2 cut(s) 163, 246
BstYI RGATCY 2 cut(s) 163, 246
BtsI GCAGTG 1 cut(s) 167
BtsIMutI CAGTG 2 cut(s) 81, 167
Csp6I GTAC 1 cut(s) 34
CviJI RGCY 5 cut(s) 39, 79, 105, 131, 194
CviKI_1 RGCY 5 cut(s) 39, 79, 105, 131, 194
CviQI GTAC 1 cut(s) 34
DpnI GATC 2 cut(s) 165, 248
DpnII GATC 2 cut(s) 163, 246
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco31I GGTCTC 1 cut(s) 282
Eco32I GATATC 1 cut(s) 301
EcoRV GATATC 1 cut(s) 301
FaiI YATR 3 cut(s) 22, 24, 330
FauNDI CATATG 1 cut(s) 22
Fnu4HI GCNGC 2 cut(s) 132, 195
Fsp4HI GCNGC 2 cut(s) 132, 195
FspBI CTAG 2 cut(s) 56, 179
GluI GCNGC 2 cut(s) 132, 195
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HinfI GANTC 1 cut(s) 278
HphI GGTGA 3 cut(s) 20, 38, 273
Hpy166II GTNNAC 1 cut(s) 18
Hpy188I TCNGA 1 cut(s) 305
Hpy188III TCNNGA 1 cut(s) 179
Hpy8I GTNNAC 1 cut(s) 18
HpyAV CCTTC 1 cut(s) 176
HpyCH4IV ACGT 1 cut(s) 325
HpyCH4V TGCA 2 cut(s) 152, 161
HpyF10VI GCNNNNNNNGC 1 cut(s) 158
HpySE526I ACGT 1 cut(s) 325
Kzo9I GATC 2 cut(s) 163, 246
LpnPI CCDG 2 cut(s) 54, 281
Lsp1109I GCAGC 1 cut(s) 118
MaeI CTAG 2 cut(s) 56, 179
MaeII ACGT 1 cut(s) 325
MaeIII GTNAC 1 cut(s) 98
MalI GATC 2 cut(s) 165, 248
MboI GATC 2 cut(s) 163, 246
MboII GAAGA 4 cut(s) 43, 85, 167, 242
MflI RGATCY 2 cut(s) 163, 246
MluCI AATT 3 cut(s) 156, 225, 255
MnlI CCTC 1 cut(s) 4
MseI TTAA 1 cut(s) 251
MspCI CTTAAG 1 cut(s) 250
Mva1269I GAATGC 2 cut(s) 45, 239
MwoI GCNNNNNNNGC 1 cut(s) 158
NdeI CATATG 1 cut(s) 22
NdeII GATC 2 cut(s) 163, 246
NmuCI GTSAC 1 cut(s) 98
PctI GAATGC 2 cut(s) 45, 239
PfeI GAWTC 1 cut(s) 278
PkrI GCNGC 2 cut(s) 133, 196
PsrI GAACNNNNNNTAC 2 cut(s) 253, 285
PsuI RGATCY 2 cut(s) 163, 246
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
SaqAI TTAA 1 cut(s) 251
SatI GCNGC 2 cut(s) 132, 195
Sau3AI GATC 2 cut(s) 163, 246
SetI ASST 5 cut(s) 10, 15, 41, 107, 328
SgeI CNNG 7 cut(s) 68, 81, 191, 250, 277, 297, 308
SmlI CTYRAG 2 cut(s) 238, 250
SmoI CTYRAG 2 cut(s) 238, 250
Sse9I AATT 3 cut(s) 156, 225, 255
SsiI CCGC 1 cut(s) 195
SspMI CTAG 2 cut(s) 56, 179
TaiI ACGT 1 cut(s) 328
TaqII GACCGA 1 cut(s) 306
TasI AATT 3 cut(s) 156, 225, 255
TatI WGTACW 1 cut(s) 33
TauI GCSGC 1 cut(s) 197
TfiI GAWTC 1 cut(s) 278
Tru1I TTAA 1 cut(s) 251
Tru9I TTAA 1 cut(s) 251
TscAI CASTG 2 cut(s) 88, 174
TseFI GTSAC 1 cut(s) 98
TseI GCWGC 1 cut(s) 131
Tsp45I GTSAC 1 cut(s) 98
TspDTI ATGAA 2 cut(s) 234, 309
TspRI CASTG 2 cut(s) 88, 174
Vha464I CTTAAG 1 cut(s) 250
XbaI TCTAGA 1 cut(s) 178
XspI CTAG 2 cut(s) 56, 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.