Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004575

Physical Location & Seq

Genomic Coordinates Forward (+)

7719853 .. 7723304

Gene Structure 3452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0094100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGAAAGGAGGGTTTAATGGATTGAAGGGTAAACAAATCTCCCTTATTTCTATAGTTCTCATGTCAACAACTATTCTCATGTGGGCATGGGAGAAAACCCCACTTCTTACTACCTTGGTTCCGGCCGAAACCGAAACCCGGTTGCAGGTGTCTCCAGAACTGAGGGATGTTGTTGTAGATAGGGCTGTACCATCGCAACAAGAACTAGATGTAGGCAAGGGTGTGACGGCATTAGCAGAGAAGGATGCCCGGAAAGAAGAATTTCGTGCGGGGTTAGGAACTACGCTAGATTCCGGACAAGAGTCTCGTAAAAGCGATGGGATTAATAGTGATCAAGTGACAGACCATGTTGAGAGTAATGGGATTTCCTCAAGTGAATTAAAAGAAGCTGCTAATGTAGTTGGAGAAGAAGCTTCAAACCCAGAAGAGAGGACGTCAGTTGATAGAAGACACGGAGAAAAAGCAGAAGAAAAGAATTCAGTCCTACAAAAACCAATAGATCCTGCTTATACAAATATCTCTGTTGGGGGAAATCTCGAGGACAAATTAACTACTCATATGGAAAGTCCAGGCTGCAATTATGCAAAAGGAAAATGGGTTGTAGGTGATAAGCAGCCATTGTATTCTGGGTTTAGTTGTAAGCAATGGTTGTCAGGGCCGTGGGCTTGCCGGTTGACACAGCGCACAGATTTTGCCTATGAGATGCTTCGATGGCAGCCAAGAGATTGTCAAATGGAAGAATTTGAAGGCTCCAAGTTTTTGAAAAGGATGCAAGACAAAACTCTAGCTTTTGTTGGAGATTCATTGGGTCGACAGCAGTTCCAATCTTTAATGTGCATGGTTACAGGTGGTAATGAGAGAAAAGATGTGATAGATGTGGGGATGGAGTATGGGATAGCCCAAGCACGTGGCGATGTCCGCCCTAGTGGGTGGGCTTATCGGTTCCCAAGCACTAACACTACCATCCTCTATTACTGGTCAGCGAGCCTCTGCGATGTGCAGCCTATTAATCCAACAGACCCAGCCACTGATTATGCCATGCACCTTGATCGACCACCAGCATTCTTGGTCCAATATCTTCACAAATTGGATGTCGTGGTCCTCAATACAGGGCACCATTGGAATCGTGGGAAGCTCAAAGCTAACCGCTGGGTAATGTATGTTGGAGGAAAGCCAAACAAGGACAAGAAGATAGCGATGATTTGGAAGGCCAAGAATGTGACTGTCTACAGTGTTGTTAATTGGGTCAACTCACAGCTCCCAAAATATCCAGGTCTCAAAGTATTCTACCGATCCATCTCGCCAAGGCATTTTGTTGGTGGGGACTGGAATACAGGAGGAAGCTGTGACAACACGAAACCCATGTCAGTAGGAAAGGAAGTATTGCAAGATGAGTCTAGTGATGAATCTGCTGCCGGCGCAGCGAAGGGAACAGGGGTTAAGATCTTGGACATAACAGCTCTATCTCAGCTTAGGGATGAGGGTCATATATCCCGGTTCAGAATCCAAGCCAAACCGGGCATGCAAGATTGTCTGCATTGGTGCTTACCTGGCGTTCCTGATACATGGAATGAAATTCTGTTCAACCAAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009295 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042644 GO:0042646 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_2 MMR_HSR1

Protein Analysis

531

Amino Acids

59.23

Weight (kDa)

6.81

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMR5N	PF14416	191 - 244	8.9e-14	PMR5 N terminal Domain
PC-Esterase	PF13839	247 - 529	5.4e-73	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004575)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66470 AT5G66470
fragaria_vesca	FvH4_1g12880 FvH4_2g39510
malus_domestica	MD02G1143800.v1.1 MD15G1257100.v1.1
prunus_persica	Prupe.7G157900_v2.0.a1 Prupe.7G157900_v2.0.a1
pyrus_communis	pycom02g11370 pycom15g22500
rosa_chinensis	RchiOBHm_Chr2g0100961 RchiOBHm_Chr6g0301441
rosa_laevigata	RLG00000011253 RLG00000012203 RLG00000017029
rosa_multiflora	Rmu_sc0014417.1_g000011
rosa_roxburghii	Rroxscaffold_2G00141710 Rroxscaffold_7G00166820
rosa_rugosa	Rorug02G0094100 Rorug02G0094200 Rorug06G0304700
rosa_samantha	Rh2AG141700 Rh2BG146900 Rh2CG148200 Rh2DG147400 Rh6AG418400 Rh6BG424600 Rh6CG431900 Rh6DG417800
rosa_wichuraiana	Rw2G011120 Rw6G036200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	136
AatII	GACGTC	1 cut(s)	437
Acc36I	ACCTGC	1 cut(s)	136
AccB1I	GGYRCC	1 cut(s)	1113
AccI	GTMKAC	2 cut(s)	811, 1227
AccIII	TCCGGA	1 cut(s)	293
AciI	CCGC	3 cut(s)	269, 919, 1147
AclWI	GGATC	2 cut(s)	494, 1287
AcoI	YGGCCR	1 cut(s)	123
AcsI	RAATTY	4 cut(s)	260, 475, 740, 1575
AcvI	CACGTG	1 cut(s)	908
AcyI	GRCGYC	1 cut(s)	434
AfaI	GTAC	1 cut(s)	189
AfiI	CCNNNNNNNGG	2 cut(s)	138, 145
AgsI	TTSAA	5 cut(s)	25, 417, 746, 763, 1585
AjnI	CCWGG	3 cut(s)	568, 1270, 1549
AluBI	AGCT	9 cut(s)	389, 413, 788, 1135, 1142, 1258, 1344, 1460, 1471
AluI	AGCT	9 cut(s)	389, 413, 788, 1135, 1142, 1258, 1344, 1460, 1471
Alw26I	GTCTC	3 cut(s)	156, 309, 1280
AlwI	GGATC	2 cut(s)	494, 1287
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	1 cut(s)	536
Aor13HI	TCCGGA	1 cut(s)	293
AoxI	GGCC	3 cut(s)	123, 656, 1209
ApeKI	GCWGC	7 cut(s)	389, 573, 613, 715, 1000, 1412, 1421
ApoI	RAATTY	4 cut(s)	260, 475, 740, 1575
ArsI	GACNNNNNNTTYG	4 cut(s)	1077, 1109, 1349, 1381
AseI	ATTAAT	2 cut(s)	324, 1008
Asp700I	GAANNNNTTC	1 cut(s)	261
AspLEI	GCGC	2 cut(s)	684, 1421
AspS9I	GGNCC	3 cut(s)	656, 1069, 1099
AsuC2I	CCSGG	4 cut(s)	139, 250, 1495, 1518
AsuHPI	GGTGA	1 cut(s)	617
AvaI	CYCGRG	1 cut(s)	536
AvaII	GGWCC	2 cut(s)	1069, 1099
BaeGI	GKGCMC	1 cut(s)	1116
BanI	GGYRCC	1 cut(s)	1113
BbrPI	CACGTG	1 cut(s)	908
BbsI	GAAGAC	1 cut(s)	454
BbvI	GCAGC	7 cut(s)	376, 560, 625, 727, 1012, 1399, 1433
BccI	CCATC	6 cut(s)	199, 311, 705, 877, 971, 1304
BceAI	ACGGC	2 cut(s)	243, 643
BcgI	CGANNNNNNTGC	2 cut(s)	1031, 1065
BciT130I	CCWGG	3 cut(s)	570, 1272, 1551
BclI	TGATCA	1 cut(s)	331
BcnI	CCSGG	4 cut(s)	139, 250, 1495, 1518
BcoDI	GTCTC	3 cut(s)	156, 309, 1280
BfaI	CTAG	6 cut(s)	206, 287, 785, 924, 1398, 1594
BfmI	CTRYAG	2 cut(s)	51, 1228
BfuAI	ACCTGC	1 cut(s)	136
BglII	AGATCT	1 cut(s)	1443
BisI	GCNGC	7 cut(s)	390, 574, 614, 716, 1001, 1413, 1422
BlsI	GCNGC	7 cut(s)	391, 575, 615, 717, 1002, 1414, 1423
Bme1390I	CCNGG	7 cut(s)	139, 250, 570, 1272, 1495, 1518, 1551
Bme18I	GGWCC	2 cut(s)	1069, 1099
BmeT110I	CYCGRG	1 cut(s)	536
BmgT120I	GGNCC	3 cut(s)	656, 1069, 1099
BmiI	GGNNCC	4 cut(s)	120, 751, 944, 1115
BmrFI	CCNGG	7 cut(s)	139, 250, 570, 1272, 1495, 1518, 1551
BmsI	GCATC	3 cut(s)	235, 693, 759
BoxI	GACNNNNGTC	1 cut(s)	301
BpiI	GAAGAC	1 cut(s)	454
BpmI	CTGGAG	1 cut(s)	138
Bpu10I	CCTNAGC	1 cut(s)	1472
BpuEI	CTTGAG	1 cut(s)	355
BpuMI	CCSGG	4 cut(s)	139, 250, 1495, 1518
BsaAI	YACGTR	1 cut(s)	908
BsaHI	GRCGYC	1 cut(s)	434
BsaI	GGTCTC	1 cut(s)	1280
BsaJI	CCNNGG	3 cut(s)	114, 659, 1304
BsaWI	WCCGGW	1 cut(s)	293
Bsc4I	CCNNNNNNNGG	2 cut(s)	138, 145
Bse118I	RCCGGY	2 cut(s)	669, 1415
Bse1I	ACTGG	2 cut(s)	980, 1331
Bse3DI	GCAATG	1 cut(s)	650
BseAI	TCCGGA	1 cut(s)	293
BseBI	CCWGG	3 cut(s)	570, 1272, 1551
BseDI	CCNNGG	3 cut(s)	114, 659, 1304
BseGI	GGATG	7 cut(s)	172, 250, 774, 888, 963, 1096, 1483
BseLI	CCNNNNNNNGG	2 cut(s)	138, 145
BseMI	GCAATG	1 cut(s)	650
BseMII	CTCAG	2 cut(s)	152, 1481
BseNI	ACTGG	2 cut(s)	980, 1331
BseSI	GKGCMC	1 cut(s)	1116
BseX3I	CGGCCG	1 cut(s)	123
BseXI	GCAGC	7 cut(s)	376, 560, 625, 727, 1012, 1399, 1433
BseYI	CCCAGC	2 cut(s)	1021, 1149
BsgI	GTGCAG	1 cut(s)	1019
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	3 cut(s)	125, 658, 1211
BshNI	GGYRCC	1 cut(s)	1113
BsiEI	CGRYCG	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	536
BsiSI	CCGG	8 cut(s)	122, 139, 250, 294, 670, 1416, 1495, 1517
BslFI	GGGAC	1 cut(s)	1337
BslI	CCNNNNNNNGG	2 cut(s)	138, 145
BsmAI	GTCTC	3 cut(s)	156, 309, 1280
BsmFI	GGGAC	1 cut(s)	1337
BsmI	GAATGC	1 cut(s)	1061
BsnI	GGCC	3 cut(s)	125, 658, 1211
Bso31I	GGTCTC	1 cut(s)	1280
BsoBI	CYCGRG	1 cut(s)	536
Bsp1286I	GDGCHC	1 cut(s)	1116
Bsp13I	TCCGGA	1 cut(s)	293
Bsp143I	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
BspACI	CCGC	3 cut(s)	269, 919, 1147
BspANI	GGCC	3 cut(s)	125, 658, 1211
BspCNI	CTCAG	2 cut(s)	153, 1480
BspEI	TCCGGA	1 cut(s)	293
BspLI	GGNNCC	4 cut(s)	120, 751, 944, 1115
BspMI	ACCTGC	1 cut(s)	136
BspPI	GGATC	2 cut(s)	494, 1287
BspT107I	GGYRCC	1 cut(s)	1113
BspTNI	GGTCTC	1 cut(s)	1280
BsrDI	GCAATG	1 cut(s)	650
BsrFI	RCCGGY	2 cut(s)	669, 1415
BsrI	ACTGG	2 cut(s)	980, 1331
BssAI	RCCGGY	2 cut(s)	669, 1415
BssECI	CCNNGG	3 cut(s)	114, 659, 1304
BssMI	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
BssNI	GRCGYC	1 cut(s)	434
BssT1I	CCWWGG	2 cut(s)	114, 1304
Bst2UI	CCWGG	3 cut(s)	570, 1272, 1551
Bst4CI	ACNGT	2 cut(s)	1225, 1232
Bst6I	CTCTTC	1 cut(s)	420
BstACI	GRCGYC	1 cut(s)	434
BstBAI	YACGTR	1 cut(s)	908
BstC8I	GCNNGC	4 cut(s)	667, 985, 1417, 1523
BstDEI	CTNAG	3 cut(s)	161, 1467, 1472
BstDSI	CCRYGG	1 cut(s)	659
BstF5I	GGATG	7 cut(s)	172, 250, 774, 888, 963, 1096, 1483
BstHHI	GCGC	2 cut(s)	684, 1421
BstKTI	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
BstMAI	GTCTC	3 cut(s)	156, 309, 1280
BstMBI	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
BstMCI	CGRYCG	1 cut(s)	126
BstMWI	GCNNNNNNNGC	5 cut(s)	712, 918, 1418, 1421, 1551
BstNI	CCWGG	3 cut(s)	570, 1272, 1551
BstNSI	RCATGY	1 cut(s)	1525
BstPAI	GACNNNNGTC	1 cut(s)	301
BstSCI	CCNGG	7 cut(s)	137, 248, 568, 1270, 1493, 1516, 1549
BstSFI	CTRYAG	2 cut(s)	51, 1228
BstSLI	GKGCMC	1 cut(s)	1116
BstV1I	GCAGC	7 cut(s)	376, 560, 625, 727, 1012, 1399, 1433
BstV2I	GAAGAC	1 cut(s)	454
BstX2I	RGATCY	2 cut(s)	499, 1443
BstXI	CCANNNNNNTGG	1 cut(s)	908
BstYI	RGATCY	2 cut(s)	499, 1443
BstZI	CGGCCG	1 cut(s)	123
BsuRI	GGCC	3 cut(s)	125, 658, 1211
BtgI	CCRYGG	1 cut(s)	659
BtgZI	GCGATG	5 cut(s)	177, 330, 927, 1008, 1211
BtsCI	GGATG	7 cut(s)	172, 250, 774, 888, 963, 1096, 1483
BtsIMutI	CAGTG	2 cut(s)	1026, 1237
BveI	ACCTGC	1 cut(s)	136
Cac8I	GCNNGC	4 cut(s)	667, 985, 1417, 1523
CaiI	CAGNNNCTG	1 cut(s)	1028
CfoI	GCGC	2 cut(s)	684, 1421
Cfr10I	RCCGGY	2 cut(s)	669, 1415
Cfr13I	GGNCC	3 cut(s)	656, 1069, 1099
Csp6I	GTAC	1 cut(s)	188
CviAII	CATG	9 cut(s)	61, 79, 87, 347, 838, 1039, 1363, 1522, 1566
CviQI	GTAC	1 cut(s)	188
DdeI	CTNAG	3 cut(s)	161, 1467, 1472
DpnI	GATC	5 cut(s)	333, 501, 1050, 1294, 1445
DpnII	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
EaeI	YGGCCR	1 cut(s)	123
EagI	CGGCCG	1 cut(s)	123
Eam1104I	CTCTTC	1 cut(s)	420
EarI	CTCTTC	1 cut(s)	420
EciI	GGCGGA	1 cut(s)	908
EclXI	CGGCCG	1 cut(s)	123
Eco130I	CCWWGG	2 cut(s)	114, 1304
Eco31I	GGTCTC	1 cut(s)	1280
Eco47I	GGWCC	2 cut(s)	1069, 1099
Eco52I	CGGCCG	1 cut(s)	123
Eco72I	CACGTG	1 cut(s)	908
Eco88I	CYCGRG	1 cut(s)	536
EcoRI	GAATTC	1 cut(s)	475
EcoRII	CCWGG	3 cut(s)	568, 1270, 1549
EcoT14I	CCWWGG	2 cut(s)	114, 1304
ErhI	CCWWGG	2 cut(s)	114, 1304
FaeI	CATG	9 cut(s)	64, 82, 90, 350, 841, 1042, 1366, 1525, 1569
FaqI	GGGAC	1 cut(s)	1337
FatI	CATG	9 cut(s)	60, 78, 86, 346, 837, 1038, 1362, 1521, 1565
FauI	CCCGC	1 cut(s)	262
FauNDI	CATATG	1 cut(s)	558
FbaI	TGATCA	1 cut(s)	331
FblI	GTMKAC	2 cut(s)	811, 1227
Fnu4HI	GCNGC	7 cut(s)	390, 574, 614, 716, 1001, 1413, 1422
FokI	GGATG	7 cut(s)	179, 257, 781, 895, 950, 1103, 1490
Fsp4HI	GCNGC	7 cut(s)	390, 574, 614, 716, 1001, 1413, 1422
FspBI	CTAG	6 cut(s)	206, 287, 785, 924, 1398, 1594
GlaI	GCGC	2 cut(s)	683, 1420
GluI	GCNGC	7 cut(s)	390, 574, 614, 716, 1001, 1413, 1422
GsaI	CCCAGC	2 cut(s)	1025, 1153
GsuI	CTGGAG	1 cut(s)	138
HaeIII	GGCC	3 cut(s)	125, 658, 1211
HapII	CCGG	8 cut(s)	122, 139, 250, 294, 670, 1416, 1495, 1517
HhaI	GCGC	2 cut(s)	684, 1421
Hin1I	GRCGYC	1 cut(s)	434
Hin1II	CATG	9 cut(s)	64, 82, 90, 350, 841, 1042, 1366, 1525, 1569
Hin6I	GCGC	2 cut(s)	682, 1419
HinP1I	GCGC	2 cut(s)	682, 1419
HincII	GTYRAC	4 cut(s)	66, 675, 812, 1249
HindII	GTYRAC	4 cut(s)	66, 675, 812, 1249
HindIII	AAGCTT	1 cut(s)	411
HinfI	GANTC	7 cut(s)	290, 302, 800, 1123, 1394, 1406, 1503
HpaII	CCGG	8 cut(s)	122, 139, 250, 294, 670, 1416, 1495, 1517
HphI	GGTGA	1 cut(s)	617
Hpy166II	GTNNAC	6 cut(s)	32, 66, 675, 812, 1228, 1249
Hpy188I	TCNGA	1 cut(s)	1502
Hpy188III	TCNNGA	4 cut(s)	155, 294, 536, 1559
Hpy8I	GTNNAC	6 cut(s)	32, 66, 675, 812, 1228, 1249
HpyAV	CCTTC	5 cut(s)	19, 235, 740, 1201, 1420
HpyCH4III	ACNGT	2 cut(s)	1225, 1232
HpyCH4IV	ACGT	2 cut(s)	434, 907
HpyF10VI	GCNNNNNNNGC	5 cut(s)	712, 918, 1418, 1421, 1551
HpyF3I	CTNAG	3 cut(s)	161, 1467, 1472
HpySE526I	ACGT	2 cut(s)	434, 907
Hsp92I	GRCGYC	1 cut(s)	434
Hsp92II	CATG	9 cut(s)	64, 82, 90, 350, 841, 1042, 1366, 1525, 1569
HspAI	GCGC	2 cut(s)	682, 1419
Kpn2I	TCCGGA	1 cut(s)	293
KroI	GCCGGC	1 cut(s)	1415
KroNI	GCCGGC	1 cut(s)	1417
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
LmnI	GCTCC	2 cut(s)	755, 1263
Lsp1109I	GCAGC	7 cut(s)	376, 560, 625, 727, 1012, 1399, 1433
LweI	GCATC	3 cut(s)	235, 693, 759
MaeI	CTAG	6 cut(s)	206, 287, 785, 924, 1398, 1594
MaeII	ACGT	2 cut(s)	434, 907
MaeIII	GTNAC	5 cut(s)	223, 337, 841, 1219, 1346
MalI	GATC	5 cut(s)	333, 501, 1050, 1294, 1445
MboI	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
MboII	GAAGA	8 cut(s)	269, 419, 437, 459, 479, 749, 1070, 1201
MflI	RGATCY	2 cut(s)	499, 1443
MhlI	GDGCHC	1 cut(s)	1116
MluCI	AATT	9 cut(s)	260, 377, 475, 545, 577, 740, 1085, 1240, 1575
MlyI	GAGTC	2 cut(s)	311, 1403
MmeI	TCCRAC	4 cut(s)	382, 775, 1037, 1144
MroI	TCCGGA	1 cut(s)	293
MroNI	GCCGGC	1 cut(s)	1415
MroXI	GAANNNNTTC	1 cut(s)	261
MseI	TTAA	8 cut(s)	15, 324, 380, 548, 830, 1008, 1239, 1440
MspA1I	CMGCKG	1 cut(s)	1149
MspI	CCGG	8 cut(s)	122, 139, 250, 294, 670, 1416, 1495, 1517
MspR9I	CCNGG	7 cut(s)	139, 250, 570, 1272, 1495, 1518, 1551
Mva1269I	GAATGC	1 cut(s)	1061
MvaI	CCWGG	3 cut(s)	570, 1272, 1551
MwoI	GCNNNNNNNGC	5 cut(s)	712, 918, 1418, 1421, 1551
NaeI	GCCGGC	1 cut(s)	1417
NciI	CCSGG	4 cut(s)	139, 250, 1495, 1518
NdeI	CATATG	1 cut(s)	558
NdeII	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
NgoMIV	GCCGGC	1 cut(s)	1415
NlaIII	CATG	9 cut(s)	64, 82, 90, 350, 841, 1042, 1366, 1525, 1569
NlaIV	GGNNCC	4 cut(s)	120, 751, 944, 1115
NmuCI	GTSAC	4 cut(s)	223, 337, 1219, 1346
NspI	RCATGY	1 cut(s)	1525
PaeI	GCATGC	1 cut(s)	1525
PaeR7I	CTCGAG	1 cut(s)	536
PaqCI	CACCTGC	1 cut(s)	136
PctI	GAATGC	1 cut(s)	1061
PdiI	GCCGGC	1 cut(s)	1417
PdmI	GAANNNNTTC	1 cut(s)	261
PfeI	GAWTC	5 cut(s)	290, 800, 1123, 1406, 1503
PkrI	GCNGC	7 cut(s)	391, 575, 615, 717, 1002, 1414, 1423
PleI	GAGTC	2 cut(s)	310, 1402
PmaCI	CACGTG	1 cut(s)	908
PmlI	CACGTG	1 cut(s)	908
PpsI	GAGTC	2 cut(s)	310, 1402
Ppu21I	YACGTR	1 cut(s)	908
PshAI	GACNNNNGTC	1 cut(s)	301
PshBI	ATTAAT	2 cut(s)	324, 1008
Psp6I	CCWGG	3 cut(s)	568, 1270, 1549
PspCI	CACGTG	1 cut(s)	908
PspFI	CCCAGC	2 cut(s)	1021, 1149
PspGI	CCWGG	3 cut(s)	568, 1270, 1549
PspN4I	GGNNCC	4 cut(s)	120, 751, 944, 1115
PspPI	GGNCC	3 cut(s)	656, 1069, 1099
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	2 cut(s)	499, 1443
RsaI	GTAC	1 cut(s)	189
RsaNI	GTAC	1 cut(s)	188
SalI	GTCGAC	1 cut(s)	810
SaqAI	TTAA	8 cut(s)	15, 324, 380, 548, 830, 1008, 1239, 1440
SatI	GCNGC	7 cut(s)	390, 574, 614, 716, 1001, 1413, 1422
Sau3AI	GATC	5 cut(s)	331, 499, 1048, 1292, 1443
Sau96I	GGNCC	3 cut(s)	656, 1069, 1099
SchI	GAGTC	2 cut(s)	311, 1403
ScrFI	CCNGG	7 cut(s)	139, 250, 570, 1272, 1495, 1518, 1551
SduI	GDGCHC	1 cut(s)	1116
SfaNI	GCATC	3 cut(s)	235, 693, 759
SfcI	CTRYAG	2 cut(s)	51, 1228
Sfr274I	CTCGAG	1 cut(s)	536
SinI	GGWCC	2 cut(s)	1069, 1099
SlaI	CTCGAG	1 cut(s)	536
SmlI	CTYRAG	2 cut(s)	370, 536
SmoI	CTYRAG	2 cut(s)	370, 536
SphI	GCATGC	1 cut(s)	1525
Sse9I	AATT	9 cut(s)	260, 377, 475, 545, 577, 740, 1085, 1240, 1575
SsiI	CCGC	3 cut(s)	269, 919, 1147
SspMI	CTAG	6 cut(s)	206, 287, 785, 924, 1398, 1594
StyD4I	CCNGG	7 cut(s)	137, 248, 568, 1270, 1493, 1516, 1549
StyI	CCWWGG	2 cut(s)	114, 1304
TaaI	ACNGT	2 cut(s)	1225, 1232
TaiI	ACGT	2 cut(s)	437, 910
TaqI	TCGA	4 cut(s)	537, 709, 811, 1051
TasI	AATT	9 cut(s)	260, 377, 475, 545, 577, 740, 1085, 1240, 1575
TfiI	GAWTC	5 cut(s)	290, 800, 1123, 1406, 1503
Tru1I	TTAA	8 cut(s)	15, 324, 380, 548, 830, 1008, 1239, 1440
Tru9I	TTAA	8 cut(s)	15, 324, 380, 548, 830, 1008, 1239, 1440
TscAI	CASTG	2 cut(s)	1033, 1237
TseFI	GTSAC	4 cut(s)	223, 337, 1219, 1346
TseI	GCWGC	7 cut(s)	389, 573, 613, 715, 1000, 1412, 1421
Tsp45I	GTSAC	4 cut(s)	223, 337, 1219, 1346
TspDTI	ATGAA	4 cut(s)	17, 792, 1419, 1587
TspGWI	ACGGA	1 cut(s)	468
TspRI	CASTG	2 cut(s)	1033, 1237
VpaK11BI	GGWCC	2 cut(s)	1069, 1099
VspI	ATTAAT	2 cut(s)	324, 1008
XapI	RAATTY	4 cut(s)	260, 475, 740, 1575
XceI	RCATGY	1 cut(s)	1525
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1124
XhoI	CTCGAG	1 cut(s)	536
XmiI	GTMKAC	2 cut(s)	811, 1227
XmnI	GAANNNNTTC	1 cut(s)	261
XspI	CTAG	6 cut(s)	206, 287, 785, 924, 1398, 1594
ZraI	GACGTC	1 cut(s)	435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.