Rorug02G0158900

Prokaryotic E2 family B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0014640
Physical Location & Seq
Reverse (-)
14154453 .. 14157071
2619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0158900.1

Sequence Viewer

Length: 2004 bp
ATGGAGATAACAGAAGCAGCTGAGAAACCAAGCTCCAAAGGCCAAGCATGGTTCTGCACAACTGGGTTACCAAGCGACATTGTGGTGGAAGTTGAAGACATGACCTTTCATCTTCACAAGTTTCCTCTCATGTCCAAAAGTCGAAAGCTTCACAACCTAATCACAGAGCAAGAGGCCAACCCATCACATCCCCAACAAGAGCTAGAAGAAGAGCCGGACGAAATTGAAGAAGTGCAGTGTCAAATACTCCTCTCAGACTTCCCGGGCGGCTCCGAGACCTTCGAAATCGCCGCCAAATTCTGCTACGGCGTCAAAATCGACCTCAACTCGACCAATGTGGGACCTCTCCGCTGCGCCGGAGAGTATCTAGACATGACAGAAGAGTACTCCGAAGACAACCTCATCTCAAAAACAGAAAGGTTCCTCTCTCAAGCCGTGTTCAAGAGCTTCAAAGAGTCCATCAAAGCTCTCAAATCCTGCGAGCGCGTCATGCCACTCGCAGAGACCTTGGGCATTACGCAGAGGTGCATCGACTCCATCGCTAACAGAGCCACCAACGCCGATCCGAGCCTGTTCGGCTGGCCGGTCAATGAAGTCGCGCCGAACCCAAGTTCATCCAAACACCAGATTCTATGGAATGGGATTGACACAGGTGGAAGAAGAAAAGGGATGTCTAGAGCAAACCATCCAGATTCTTGGCTCGAAGACTTGGTCCTCTTAAGCCTCCCTTTCTTCAAGCGATTGATTATGGCAATGAAAGACGGAAATCTCAGTCTGGAAATGGTGGAGACCTGTTTGATGTACTACGCCAAGAAATACATTCCCGGAATCTCAAGATCGACTCGAAAGTCCTCTTCTTCCTCCACCACTTCTAGCTCCTCTTTAGCTTTGGAAAACCAACAGAGAGAACTATTGGAGACCATAATCTCAAACCTTCCATTGGAGAAAACACCAAGACCTCCAACCAATACAAGATTTCTGTTTGGGTTGTTGAGAACGGCGAATATACTGAACGCCTCGCAGGGATGTAAAGCCGCATTGGAGAAGAAGATTGGGTCGCAGCTCGAGCAAGCGAGCTTAGACGATCTGCTCATACCGAGCTATTCGTATCTGAATGAGACCCTATACGACGTCGACTGCGTGGAGAGGATTCTGGGGTATTTCTTAGATGGGTTGGATCAGAGAAACAGAAACAGAGATGGAATTGAAGGTGAAGATGAAGATGAAGACCGTGATATAGAAGGTGCTAGATCGCCGGCGCTGATGCTTGTCGGGAAATTAACCGACGAGTATCTCTCCGAGATCGCATCGGATGCGAATTTGAAGCCGGATAGATTCTACAACTTTGCCATGGCCCTGCCGGAGCAGGCGAGGCTGTTCGACGACGGGCTTTACAGAGCAGTTGATGTTTATCTAAAGGCTCATCCATGGATATCGGAACCGGAGCGGGAGAAGATCTGCGGGATACTAGACTCCCAGAAGCTCACACTCGAGGCGTGCACGCACGCCGCGCAGAACGAGCGGTTGCCGCTACGCGCCGTCGTGCAAGTCTTGTTCTTCGAGCAGCTTCAGCTCCGTCACGCGATCGCCGGTACCCTTATCGCCGGGGAGACTGCGCCGCCGGACTCCAGTCGGCCCTCGGTGTTGCGAAGAGAGGCGGAGACTGAGGAGGAGGACGAGGAGGAGGAAGGCGGTGCTGTGGAGGTACACGCGGAGGAAGGAGTCGGCGGCACGTGGAGGTCGGCTGTGAGGGAGAATCAGGTGCTGCGGTTGGATATGGATAGCATGAGGACGCGGGTGCACCAGCTTGAGCGGGAGTGTTCCAACATGAAGAAGGTGATCGAAAAGATCGACAACAAACCGGGTCAACCCGATGGACGGGCCGGATGGAAAGGCTCGTTGACCCGGCGGTTCGGGTGCAAGTTCAAGACCCAAGTGTGCGATTCGCACGAGCCGACGGTCGTGGACGGGCGGAAAGGGCGGCGCCACCAGCATCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
UQ_con

Protein Analysis

667

Amino Acids

75.04

Weight (kDa)

5.13

Isoelectric Point (pI)

52.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 231 - 500 1.6e-86 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014640)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18560 FvH4_1g18560 FvH4_1g18560
malus_domestica MD02G1193300.v1.1 MD15G1303600.v1.1
prunus_persica Prupe.6G213500_v2.0.a1
pyrus_communis pycom02g15700 pycom15g26650
rosa_chinensis RchiOBHm_Chr2g0109261
rosa_laevigata RLG00000017729
rosa_multiflora Rmu_sc0001807.1_g000008
rosa_roxburghii Rroxscaffold_2G00134350
rosa_rugosa Rorug02G0158900
rosa_samantha Rh2AG210300 Rh2BG220700 Rh2CG212700 Rh2DG216500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 847
AatII GACGTC 1 cut(s) 1134
Acc65I GGTACC 1 cut(s) 1592
AccB1I GGYRCC 2 cut(s) 1592, 1983
AccBSI CCGCTC 3 cut(s) 1447, 1522, 1813
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
AclWI GGATC 2 cut(s) 557, 1185
AcoI YGGCCR 1 cut(s) 581
AcsI RAATTY 2 cut(s) 296, 1318
AcuI CTGAAG 1 cut(s) 1553
AcvI CACGTG 1 cut(s) 1734
AcyI GRCGYC 3 cut(s) 309, 1131, 1984
AfaI GTAC 4 cut(s) 386, 803, 1594, 1707
AfiI CCNNNNNNNGG 2 cut(s) 940, 1878
AflII CTTAAG 1 cut(s) 718
AgsI TTSAA 8 cut(s) 95, 227, 442, 451, 736, 1208, 1324, 1927
Alw21I GWGCWC 2 cut(s) 1502, 1803
Alw26I GTCTC 7 cut(s) 269, 497, 782, 911, 1112, 1604, 1655
Alw44I GTGCAC 2 cut(s) 1498, 1799
AlwI GGATC 2 cut(s) 557, 1185
AlwNI CAGNNNCTG 1 cut(s) 1765
Ama87I CYCGRG 3 cut(s) 262, 1064, 1490
AoxI GGCC 6 cut(s) 40, 174, 581, 1353, 1634, 1881
ApaLI GTGCAC 2 cut(s) 1498, 1799
ApeKI GCWGC 5 cut(s) 17, 351, 1060, 1564, 1765
ApoI RAATTY 2 cut(s) 296, 1318
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
AsiSI GCGATCGC 1 cut(s) 1587
Asp718I GGTACC 1 cut(s) 1592
AspLEI GCGC 8 cut(s) 356, 486, 601, 1261, 1513, 1538, 1618, 1986
AspS9I GGNCC 5 cut(s) 341, 712, 1354, 1635, 1881
AsuC2I CCSGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
AsuHPI GGTGA 2 cut(s) 1223, 1849
AsuII TTCGAA 1 cut(s) 282
AvaI CYCGRG 3 cut(s) 262, 1064, 1490
AvaII GGWCC 2 cut(s) 341, 712
BaeGI GKGCMC 2 cut(s) 1502, 1803
BanI GGYRCC 2 cut(s) 1592, 1983
BauI CACGAG 1 cut(s) 1949
BbrPI CACGTG 1 cut(s) 1734
BbsI GAAGAC 4 cut(s) 102, 399, 711, 1233
Bbv12I GWGCWC 2 cut(s) 1502, 1803
BbvI GCAGC 5 cut(s) 29, 338, 1072, 1576, 1752
BccI CCATC 8 cut(s) 190, 467, 545, 693, 1163, 1193, 1868, 1881
BceAI ACGGC 4 cut(s) 322, 419, 1014, 1523
BciVI GTATCC 1 cut(s) 1458
BcnI CCSGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
BcoDI GTCTC 7 cut(s) 269, 497, 782, 911, 1112, 1604, 1655
BfaI CTAG 6 cut(s) 203, 368, 675, 873, 1248, 1469
BfoI RGCGCY 2 cut(s) 1262, 1987
BfrI CTTAAG 1 cut(s) 718
BfuI GTATCC 1 cut(s) 1458
BglI GCCNNNNNGGC 1 cut(s) 576
BglII AGATCT 1 cut(s) 1455
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
Bme18I GGWCC 2 cut(s) 341, 712
BmeT110I CYCGRG 3 cut(s) 262, 1064, 1490
BmgT120I GGNCC 5 cut(s) 341, 712, 1354, 1635, 1881
BmiI GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1985
BmrFI CCNGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
BmrI ACTGGG 1 cut(s) 72
BmsI GCATC 4 cut(s) 537, 1254, 1303, 1316
BmuI ACTGGG 1 cut(s) 72
BoxI GACNNNNGTC 1 cut(s) 1629
BpiI GAAGAC 4 cut(s) 102, 399, 711, 1233
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 1 cut(s) 1612
Bpu14I TTCGAA 1 cut(s) 282
BpuEI CTTGAG 3 cut(s) 414, 817, 1829
BpuMI CCSGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
BsaAI YACGTR 1 cut(s) 1734
BsaBI GATNNNNATC 1 cut(s) 1410
BsaHI GRCGYC 3 cut(s) 309, 1131, 1984
BsaI GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsaJI CCNNGG 6 cut(s) 262, 507, 1350, 1427, 1605, 1638
BsaWI WCCGGW 1 cut(s) 1441
Bsc4I CCNNNNNNNGG 2 cut(s) 940, 1878
Bse118I RCCGGY 3 cut(s) 583, 1255, 1589
Bse1I ACTGG 2 cut(s) 67, 1629
Bse3DI GCAATG 1 cut(s) 759
Bse8I GATNNNNATC 1 cut(s) 1410
BseDI CCNNGG 6 cut(s) 262, 507, 1350, 1427, 1605, 1638
BseGI GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1892
BseJI GATNNNNATC 1 cut(s) 1410
BseLI CCNNNNNNNGG 2 cut(s) 940, 1878
BseMI GCAATG 1 cut(s) 759
BseMII CTCAG 4 cut(s) 12, 267, 784, 1656
BseNI ACTGG 2 cut(s) 67, 1629
BseRI GAGGAG 6 cut(s) 239, 868, 1682, 1685, 1694, 1697
BseSI GKGCMC 2 cut(s) 1502, 1803
BseXI GCAGC 5 cut(s) 29, 338, 1072, 1576, 1752
BsgI GTGCAG 2 cut(s) 40, 254
Bsh1236I CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
Bsh1285I CGRYCG 2 cut(s) 1587, 1962
BshFI GGCC 6 cut(s) 42, 176, 583, 1355, 1636, 1883
BshNI GGYRCC 2 cut(s) 1592, 1983
BsiEI CGRYCG 2 cut(s) 1587, 1962
BsiHKAI GWGCWC 2 cut(s) 1502, 1803
BsiHKCI CYCGRG 3 cut(s) 262, 1064, 1490
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 2 cut(s) 940, 1878
BsmAI GTCTC 7 cut(s) 269, 497, 782, 911, 1112, 1604, 1655
BsmFI GGGAC 1 cut(s) 354
BsnI GGCC 6 cut(s) 42, 176, 583, 1355, 1636, 1883
Bso31I GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsoBI CYCGRG 3 cut(s) 262, 1064, 1490
Bsp119I TTCGAA 1 cut(s) 282
Bsp1286I GDGCHC 2 cut(s) 1502, 1803
Bsp19I CCATGG 2 cut(s) 1350, 1427
BspANI GGCC 6 cut(s) 42, 176, 583, 1355, 1636, 1883
BspCNI CTCAG 4 cut(s) 13, 266, 783, 1657
BspFNI CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
BspLI GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1985
BspPI GGATC 2 cut(s) 557, 1185
BspQI GCTCTTC 1 cut(s) 204
BspT104I TTCGAA 1 cut(s) 282
BspT107I GGYRCC 2 cut(s) 1592, 1983
BspTI CTTAAG 1 cut(s) 718
BspTNI GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsrBI CCGCTC 3 cut(s) 1447, 1522, 1813
BsrDI GCAATG 1 cut(s) 759
BsrFI RCCGGY 3 cut(s) 583, 1255, 1589
BsrI ACTGG 2 cut(s) 67, 1629
BssAI RCCGGY 3 cut(s) 583, 1255, 1589
BssECI CCNNGG 6 cut(s) 262, 507, 1350, 1427, 1605, 1638
BssNI GRCGYC 3 cut(s) 309, 1131, 1984
BssSI CACGAG 1 cut(s) 1949
BssT1I CCWWGG 3 cut(s) 507, 1350, 1427
Bst2BI CACGAG 1 cut(s) 1949
Bst4CI ACNGT 2 cut(s) 1232, 1960
Bst6I CTCTTC 4 cut(s) 204, 375, 859, 1645
BstACI GRCGYC 3 cut(s) 309, 1131, 1984
BstAFI CTTAAG 1 cut(s) 718
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstBAI YACGTR 1 cut(s) 1734
BstBI TTCGAA 1 cut(s) 282
BstC8I GCNNGC 9 cut(s) 482, 581, 1071, 1075, 1257, 1368, 1498, 1502, 1506
BstDEI CTNAG 6 cut(s) 21, 253, 770, 1078, 1165, 1665
BstDSI CCRYGG 2 cut(s) 1350, 1427
BstEII GGTNACC 1 cut(s) 66
BstF5I GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1892
BstFNI CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
BstH2I RGCGCY 2 cut(s) 1262, 1987
BstHHI GCGC 8 cut(s) 356, 486, 601, 1261, 1513, 1538, 1618, 1986
BstMAI GTCTC 7 cut(s) 269, 497, 782, 911, 1112, 1604, 1655
BstMCI CGRYCG 2 cut(s) 1587, 1962
BstPAI GACNNNNGTC 1 cut(s) 1629
BstPI GGTNACC 1 cut(s) 66
BstSCI CCNGG 6 cut(s) 261, 262, 823, 1604, 1861, 1904
BstSLI GKGCMC 2 cut(s) 1502, 1803
BstUI CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
BstV1I GCAGC 5 cut(s) 29, 338, 1072, 1576, 1752
BstV2I GAAGAC 4 cut(s) 102, 399, 711, 1233
BstX2I RGATCY 1 cut(s) 1455
BstXI CCANNNNNNTGG 1 cut(s) 696
BstYI RGATCY 1 cut(s) 1455
BsuI GTATCC 1 cut(s) 1458
BsuRI GGCC 6 cut(s) 42, 176, 583, 1355, 1636, 1883
BtgI CCRYGG 2 cut(s) 1350, 1427
BtgZI GCGATG 1 cut(s) 523
BtsCI GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1892
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 1 cut(s) 242
Cac8I GCNNGC 9 cut(s) 482, 581, 1071, 1075, 1257, 1368, 1498, 1502, 1506
CaiI CAGNNNCTG 1 cut(s) 1765
CfoI GCGC 8 cut(s) 356, 486, 601, 1261, 1513, 1538, 1618, 1986
Cfr10I RCCGGY 3 cut(s) 583, 1255, 1589
Cfr13I GGNCC 5 cut(s) 341, 712, 1354, 1635, 1881
Cfr9I CCCGGG 1 cut(s) 262
CseI GACGC 3 cut(s) 298, 475, 1801
Csp6I GTAC 4 cut(s) 385, 802, 1593, 1706
CviAII CATG 9 cut(s) 48, 100, 130, 373, 490, 1351, 1428, 1786, 1828
CviQI GTAC 4 cut(s) 385, 802, 1593, 1706
DdeI CTNAG 6 cut(s) 21, 253, 770, 1078, 1165, 1665
DinI GGCGCC 1 cut(s) 1985
DrdI GACNNNNNNGTC 1 cut(s) 847
DseDI GACNNNNNNGTC 1 cut(s) 847
EaeI YGGCCR 1 cut(s) 581
Eam1104I CTCTTC 4 cut(s) 204, 375, 859, 1645
EarI CTCTTC 4 cut(s) 204, 375, 859, 1645
EciI GGCGGA 2 cut(s) 1673, 1987
Eco130I CCWWGG 3 cut(s) 507, 1350, 1427
Eco31I GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
Eco32I GATATC 1 cut(s) 1434
Eco47I GGWCC 2 cut(s) 341, 712
Eco57I CTGAAG 1 cut(s) 1553
Eco72I CACGTG 1 cut(s) 1734
Eco88I CYCGRG 3 cut(s) 262, 1064, 1490
Eco91I GGTNACC 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 341
EcoO65I GGTNACC 1 cut(s) 66
EcoRV GATATC 1 cut(s) 1434
EcoT14I CCWWGG 3 cut(s) 507, 1350, 1427
EgeI GGCGCC 1 cut(s) 1985
EheI GGCGCC 1 cut(s) 1985
ErhI CCWWGG 3 cut(s) 507, 1350, 1427
FaeI CATG 9 cut(s) 51, 103, 133, 376, 493, 1354, 1431, 1789, 1831
FalI AAGNNNNNCTT 2 cut(s) 712, 744
FaqI GGGAC 1 cut(s) 354
FatI CATG 9 cut(s) 47, 99, 129, 372, 489, 1350, 1427, 1785, 1827
FauI CCCGC 4 cut(s) 1440, 1454, 1788, 1806
FblI GTMKAC 1 cut(s) 1134
FokI GGATG 8 cut(s) 174, 601, 672, 682, 1038, 1325, 1410, 1899
FspBI CTAG 6 cut(s) 203, 368, 675, 873, 1248, 1469
GlaI GCGC 8 cut(s) 355, 485, 600, 1260, 1512, 1537, 1617, 1985
GsuI CTGGAG 1 cut(s) 1612
HaeII RGCGCY 2 cut(s) 1262, 1987
HaeIII GGCC 6 cut(s) 42, 176, 583, 1355, 1636, 1883
HgaI GACGC 3 cut(s) 298, 475, 1801
HhaI GCGC 8 cut(s) 356, 486, 601, 1261, 1513, 1538, 1618, 1986
Hin1I GRCGYC 3 cut(s) 309, 1131, 1984
Hin1II CATG 9 cut(s) 51, 103, 133, 376, 493, 1354, 1431, 1789, 1831
Hin6I GCGC 8 cut(s) 354, 484, 599, 1259, 1511, 1536, 1616, 1984
HinP1I GCGC 8 cut(s) 354, 484, 599, 1259, 1511, 1536, 1616, 1984
HincII GTYRAC 3 cut(s) 1135, 1868, 1902
HindII GTYRAC 3 cut(s) 1135, 1868, 1902
HindIII AAGCTT 1 cut(s) 146
HphI GGTGA 2 cut(s) 1223, 1849
Hpy166II GTNNAC 7 cut(s) 1135, 1500, 1708, 1801, 1868, 1902, 1966
Hpy188I TCNGA 9 cut(s) 256, 274, 391, 567, 1113, 1182, 1300, 1312, 1438
Hpy188III TCNNGA 8 cut(s) 368, 442, 675, 689, 776, 834, 1273, 1927
Hpy8I GTNNAC 7 cut(s) 1135, 1500, 1708, 1801, 1868, 1902, 1966
Hpy99I CGWCG 7 cut(s) 1133, 1136, 1289, 1385, 1388, 1544, 1960
HpyAV CCTTC 7 cut(s) 289, 944, 1202, 1235, 1682, 1712, 1828
HpyCH4III ACNGT 2 cut(s) 1232, 1960
HpyCH4IV ACGT 2 cut(s) 1131, 1733
HpyCH4V TGCA 7 cut(s) 57, 235, 528, 1500, 1546, 1801, 1920
HpyF3I CTNAG 6 cut(s) 21, 253, 770, 1078, 1165, 1665
HpySE526I ACGT 2 cut(s) 1131, 1733
Hsp92I GRCGYC 3 cut(s) 309, 1131, 1984
Hsp92II CATG 9 cut(s) 51, 103, 133, 376, 493, 1354, 1431, 1789, 1831
HspAI GCGC 8 cut(s) 354, 484, 599, 1259, 1511, 1536, 1616, 1984
KasI GGCGCC 1 cut(s) 1983
KpnI GGTACC 1 cut(s) 1596
KroI GCCGGC 1 cut(s) 1255
KroNI GCCGGC 1 cut(s) 1257
LguI GCTCTTC 1 cut(s) 204
LmnI GCTCC 6 cut(s) 38, 275, 881, 1363, 1444, 1578
Lsp1109I GCAGC 5 cut(s) 29, 338, 1072, 1576, 1752
LweI GCATC 4 cut(s) 537, 1254, 1303, 1316
MaeI CTAG 6 cut(s) 203, 368, 675, 873, 1248, 1469
MaeII ACGT 2 cut(s) 1131, 1733
MaeIII GTNAC 2 cut(s) 66, 1577
MbiI CCGCTC 3 cut(s) 1447, 1522, 1813
MflI RGATCY 1 cut(s) 1455
MhlI GDGCHC 2 cut(s) 1502, 1803
MluCI AATT 5 cut(s) 222, 296, 1203, 1277, 1318
Mly113I GGCGCC 1 cut(s) 1984
MlyI GAGTC 6 cut(s) 464, 527, 835, 1466, 1619, 1731
MmeI TCCRAC 4 cut(s) 986, 1155, 1752, 1848
MreI CGCCGGCG 1 cut(s) 1255
MroNI GCCGGC 1 cut(s) 1255
MseI TTAA 2 cut(s) 719, 1280
MslI CAYNNNNRTG 1 cut(s) 83
MspA1I CMGCKG 2 cut(s) 20, 351
MspCI CTTAAG 1 cut(s) 718
MspR9I CCNGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
MvnI CGCG 7 cut(s) 486, 599, 1511, 1536, 1583, 1712, 1795
NaeI GCCGGC 1 cut(s) 1257
NarI GGCGCC 1 cut(s) 1984
NciI CCSGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
NcoI CCATGG 2 cut(s) 1350, 1427
NgoMIV GCCGGC 1 cut(s) 1255
NlaIII CATG 9 cut(s) 51, 103, 133, 376, 493, 1354, 1431, 1789, 1831
NlaIV GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1985
NmuCI GTSAC 1 cut(s) 1577
NspV TTCGAA 1 cut(s) 282
PaeR7I CTCGAG 2 cut(s) 1064, 1490
PciSI GCTCTTC 1 cut(s) 204
PcsI WCGNNNNNNNCGW 3 cut(s) 1137, 1848, 1952
PdiI GCCGGC 1 cut(s) 1257
PfeI GAWTC 7 cut(s) 628, 692, 828, 1150, 1335, 1756, 1943
PflFI GACNNNGTC 1 cut(s) 710
PfoI TCCNGGA 1 cut(s) 823
Ple19I CGATCG 1 cut(s) 1587
PleI GAGTC 6 cut(s) 463, 527, 835, 1466, 1619, 1730
PluTI GGCGCC 1 cut(s) 1987
PmaCI CACGTG 1 cut(s) 1734
PmlI CACGTG 1 cut(s) 1734
PpsI GAGTC 6 cut(s) 463, 527, 835, 1466, 1619, 1730
Ppu21I YACGTR 1 cut(s) 1734
PpuMI RGGWCCY 1 cut(s) 341
PshAI GACNNNNGTC 1 cut(s) 1629
Psp5II RGGWCCY 1 cut(s) 341
PspCI CACGTG 1 cut(s) 1734
PspEI GGTNACC 1 cut(s) 66
PspN4I GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1985
PspPI GGNCC 5 cut(s) 341, 712, 1354, 1635, 1881
PspPPI RGGWCCY 1 cut(s) 341
PspXI VCTCGAGB 2 cut(s) 1064, 1490
PstNI CAGNNNCTG 1 cut(s) 1765
PsuI RGATCY 1 cut(s) 1455
PsyI GACNNNGTC 1 cut(s) 710
PvuI CGATCG 1 cut(s) 1587
PvuII CAGCTG 1 cut(s) 20
RgaI GCGATCGC 1 cut(s) 1587
RsaI GTAC 4 cut(s) 386, 803, 1594, 1707
RsaNI GTAC 4 cut(s) 385, 802, 1593, 1706
RseI CAYNNNNRTG 1 cut(s) 83
SalI GTCGAC 1 cut(s) 1133
SapI GCTCTTC 1 cut(s) 204
SaqAI TTAA 2 cut(s) 719, 1280
Sau96I GGNCC 5 cut(s) 341, 712, 1354, 1635, 1881
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 6 cut(s) 464, 527, 835, 1466, 1619, 1731
ScrFI CCNGG 6 cut(s) 263, 264, 825, 1606, 1863, 1906
SduI GDGCHC 2 cut(s) 1502, 1803
SfaAI GCGATCGC 1 cut(s) 1587
SfaNI GCATC 4 cut(s) 537, 1254, 1303, 1316
SfoI GGCGCC 1 cut(s) 1985
Sfr274I CTCGAG 2 cut(s) 1064, 1490
SfuI TTCGAA 1 cut(s) 282
SgfI GCGATCGC 1 cut(s) 1587
SgrAI CRCCGGYG 1 cut(s) 1255
SinI GGWCC 2 cut(s) 341, 712
SlaI CTCGAG 2 cut(s) 1064, 1490
SmaI CCCGGG 1 cut(s) 264
SmiMI CAYNNNNRTG 1 cut(s) 83
SmlI CTYRAG 6 cut(s) 429, 718, 832, 1064, 1490, 1808
SmoI CTYRAG 6 cut(s) 429, 718, 832, 1064, 1490, 1808
Sse9I AATT 5 cut(s) 222, 296, 1203, 1277, 1318
SspDI GGCGCC 1 cut(s) 1983
SspMI CTAG 6 cut(s) 203, 368, 675, 873, 1248, 1469
StyD4I CCNGG 6 cut(s) 261, 262, 823, 1604, 1861, 1904
StyI CCWWGG 3 cut(s) 507, 1350, 1427
TaaI ACNGT 2 cut(s) 1232, 1960
TaiI ACGT 2 cut(s) 1134, 1736
TasI AATT 5 cut(s) 222, 296, 1203, 1277, 1318
TatI WGTACW 2 cut(s) 384, 801
TauI GCSGC 8 cut(s) 270, 293, 1037, 1511, 1531, 1621, 1731, 1984
TfiI GAWTC 7 cut(s) 628, 692, 828, 1150, 1335, 1756, 1943
Tru1I TTAA 2 cut(s) 719, 1280
Tru9I TTAA 2 cut(s) 719, 1280
TscAI CASTG 1 cut(s) 242
TseFI GTSAC 1 cut(s) 1577
TseI GCWGC 5 cut(s) 17, 351, 1060, 1564, 1765
Tsp45I GTSAC 1 cut(s) 1577
TspDTI ATGAA 7 cut(s) 98, 603, 606, 770, 1233, 1239, 1844
TspGWI ACGGA 2 cut(s) 777, 1565
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 1 cut(s) 242
Tth111I GACNNNGTC 1 cut(s) 710
Vha464I CTTAAG 1 cut(s) 718
VneI GTGCAC 2 cut(s) 1498, 1799
VpaK11BI GGWCC 2 cut(s) 341, 712
XapI RAATTY 2 cut(s) 296, 1318
XbaI TCTAGA 2 cut(s) 367, 674
XhoI CTCGAG 2 cut(s) 1064, 1490
XmaI CCCGGG 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 6 cut(s) 203, 368, 675, 873, 1248, 1469
ZraI GACGTC 1 cut(s) 1132
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.