Rorug02G0287000

Bifunctional riboflavin kinase FMN phosphatase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
31326400 .. 31335198
8799 bp
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UTR
Exon/CDS
Intron
Rorug02G0287000.1

Sequence Viewer

Length: 237 bp
ATGGCGAGGAAAAGTCTCAAGTATCTTCCTGCTATCTGTGCTGTATTGTCAGGCACAGAAGACGTTGGAGTATCCTCTACTCAATCTGAAGACTTGTCTATTACTTCTACTACTTCAGGTACTGAGGCTGGAGAATTAAAGCTTCCTACTAACATGCATGGAAGGAATGGAAAGGTTGCTTACATTGATGCTGACCCAGCAGCAAAGGCAGTTGCTGCAACTATCCCTGGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

78

Amino Acids

7.95

Weight (kDa)

5.64

Isoelectric Point (pI)

32.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 2 cut(s) 99, 108
AfaI GTAC 1 cut(s) 121
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
Alw26I GTCTC 1 cut(s) 20
AlwNI CAGNNNCTG 2 cut(s) 122, 215
ApeKI GCWGC 2 cut(s) 200, 215
BbsI GAAGAC 2 cut(s) 66, 96
BbvI GCAGC 2 cut(s) 202, 212
BciT130I CCWGG 1 cut(s) 228
BciVI GTATCC 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 20
BfuI GTATCC 1 cut(s) 82
BisI GCNGC 2 cut(s) 201, 216
BlsI GCNGC 2 cut(s) 202, 217
Bme1390I CCNGG 1 cut(s) 228
BmrFI CCNGG 1 cut(s) 228
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 2 cut(s) 66, 96
BpmI CTGGAG 1 cut(s) 150
BsaJI CCNNGG 1 cut(s) 226
BseBI CCWGG 1 cut(s) 228
BseDI CCNNGG 1 cut(s) 226
BseMII CTCAG 1 cut(s) 114
BseXI GCAGC 2 cut(s) 202, 212
BseYI CCCAGC 1 cut(s) 196
BsmAI GTCTC 1 cut(s) 20
BspCNI CTCAG 1 cut(s) 115
BssECI CCNNGG 1 cut(s) 226
Bst2UI CCWGG 1 cut(s) 228
BstAPI GCANNNNNTGC 1 cut(s) 215
BstDEI CTNAG 1 cut(s) 123
BstMAI GTCTC 1 cut(s) 20
BstMWI GCNNNNNNNGC 4 cut(s) 38, 197, 206, 215
BstNI CCWGG 1 cut(s) 228
BstNSI RCATGY 1 cut(s) 157
BstSCI CCNGG 1 cut(s) 226
BstV1I GCAGC 2 cut(s) 202, 212
BstV2I GAAGAC 2 cut(s) 66, 96
BsuI GTATCC 1 cut(s) 82
CaiI CAGNNNCTG 2 cut(s) 122, 215
Csp6I GTAC 1 cut(s) 120
CviAII CATG 2 cut(s) 154, 158
CviJI RGCY 2 cut(s) 128, 142
CviKI_1 RGCY 2 cut(s) 128, 142
CviQI GTAC 1 cut(s) 120
DdeI CTNAG 1 cut(s) 123
Eco57I CTGAAG 2 cut(s) 99, 108
EcoRII CCWGG 1 cut(s) 226
EcoT22I ATGCAT 1 cut(s) 159
FaeI CATG 2 cut(s) 157, 161
FaiI YATR 2 cut(s) 155, 159
FatI CATG 2 cut(s) 153, 157
Fnu4HI GCNGC 2 cut(s) 201, 216
Fsp4HI GCNGC 2 cut(s) 201, 216
GluI GCNGC 2 cut(s) 201, 216
GsaI CCCAGC 1 cut(s) 200
GsuI CTGGAG 1 cut(s) 150
Hin1II CATG 2 cut(s) 157, 161
HindIII AAGCTT 1 cut(s) 140
Hpy188I TCNGA 1 cut(s) 88
HpyAV CCTTC 1 cut(s) 156
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 2 cut(s) 157, 218
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 197, 206, 215
HpyF3I CTNAG 1 cut(s) 123
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 2 cut(s) 157, 161
LpnPI CCDG 6 cut(s) 36, 42, 102, 114, 210, 213
Lsp1109I GCAGC 2 cut(s) 202, 212
LweI GCATC 1 cut(s) 178
MaeII ACGT 1 cut(s) 63
MboII GAAGA 3 cut(s) 17, 71, 101
MluCI AATT 1 cut(s) 134
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 2 cut(s) 85, 118
Mph1103I ATGCAT 1 cut(s) 159
MseI TTAA 1 cut(s) 137
MspR9I CCNGG 1 cut(s) 228
MvaI CCWGG 1 cut(s) 228
MwoI GCNNNNNNNGC 4 cut(s) 38, 197, 206, 215
NlaIII CATG 2 cut(s) 157, 161
NsiI ATGCAT 1 cut(s) 159
NspI RCATGY 1 cut(s) 157
PkrI GCNGC 2 cut(s) 202, 217
Psp6I CCWGG 1 cut(s) 226
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 1 cut(s) 226
PstNI CAGNNNCTG 2 cut(s) 122, 215
RsaI GTAC 1 cut(s) 121
RsaNI GTAC 1 cut(s) 120
SaqAI TTAA 1 cut(s) 137
SatI GCNGC 2 cut(s) 201, 216
ScrFI CCNGG 1 cut(s) 228
SetI ASST 4 cut(s) 66, 121, 144, 177
SfaNI GCATC 1 cut(s) 178
SmlI CTYRAG 1 cut(s) 17
SmoI CTYRAG 1 cut(s) 17
Sse9I AATT 1 cut(s) 134
StyD4I CCNGG 1 cut(s) 226
TaiI ACGT 1 cut(s) 66
TasI AATT 1 cut(s) 134
Tru1I TTAA 1 cut(s) 137
Tru9I TTAA 1 cut(s) 137
TseI GCWGC 2 cut(s) 200, 215
XceI RCATGY 1 cut(s) 157
Zsp2I ATGCAT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.