Rorug02G0328800

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0008507
Physical Location & Seq
Reverse (-)
40315001 .. 40329920
14920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0328800.1

Sequence Viewer

Length: 5124 bp
ATGGAGACTGGATCGGAGGGAGAGAATACGAGAGCTCAGGCTCAGGCTCAGGAAGGTGAGATCAGAACCAAGCGCAAAATGAAGACTCGTTCGCAGTTGGAAGTTCTTGAGCAAGCTTATGCAGCTGAGCAATACCCGTCGGAGTCGGTGAGAGCTGAGCTGTCGGCGAAATTGGATCTTTCCGATCGGCAACTACAGATGTGGTTTTGCCACCGGAGATTGAAGGACCGTAAGCCGACGCCGACCACCGGGAAGCGGCAGAGGAAGGACTCTCCGGCTGGAACGACTGGAGTGGTTTCTGAGGAAATGGCGGGGAGTGAGCCGCCGCCGCCGCCGCAGCAGTTGATAATAGAGGCTCGAGCTGTTGCTTTTGTGGAGGCGCAGCTGGGGGAGCCATTCAGGGAGGACGGGCCGATACTGGGCTTGGAGTTTGATCCGTTGCCACCAGGCGCATTTGGTTCCTCCGTAGGAGTGGCAACTGTTGGGCAGCAGAAGCAATCTGGATGGCCATATTCTGCAAATATATATGAGCAGTCTAATGCTAAACCGATTAAGGGTGCTTCAAGGACTGTCCATGAATACCAGTTTCTTCCAGAAAAGCCAACTGTTAGGACAGACACTTATGAAAGGGCTGCTCCATCTCACCACTATGGTTCACCCACTGAATCTCGCCATGCAAGGATTCCATTATCTACTGTGTCCTCGTTCATTCATGGTAATGAACAAGTACCCACTGTATATGGATTTCAAAGCCAGATGGCTGGACTAAATCTTTTGTCACAGCAAGGCAGGGCTGGTCACCTCTTGCCATCTGCTTCAGAAGAATATGGCAATGTTCATGGAAAGAACTTCACGAATATTACCATGGATGCTCATTTTAGTGCTCACCCAATTAATCAACTGAACAATCCTTTTATACCATTTGCCAGAAGGGTGGCTCATGACGAGGATGATGTTTTAAGATTGGAAAGGAAGCACAAGAGTGAAGAAGCAAGAATAATGCGGGAAGTTGAAGCCCATGAGAAAAGGATACGTAAAGAGCTTGAAAAACAAGATATCCTGAGACAAAAGAGAGAAGAGCAGATGAGGAAAGAAATGGAGAGGATTGATCGGGAGAGGAGGAAGGAAGAAGAAAGGCTATTGCGTGAAAAGCAGAGAGAGGAGGAGAGATACCTAAGGGAGCAAAGGCGTGAACTGGAGCGAAAGGAGAAATTCTTACAGAAGGAGTCAATAAGAGCTGAGAAAATGAGACAAAAAGAAGAATTACGCAGAGAGAAAGAGGCAGCAAGGCTTAAAGCTGCTAATGAGAGAGCTATTGCTCGTAAAAATGCTAAAGAATCAATGGAACTCATTGAGGATGAATGCCTGGAACTCATGGAGTTAGCTGCATCAAGCAAGGAACTTCCTTCCATGTTGTCTCTTGATTATGAAACCTTGCAAAATCTTGAATCATTTAGAGATATGCGGAGTACATTCCCACCCAAATCTGTGCAGTTGAAAAAACCTTTTGGTATTCAACCTTGGATAGATTCAGAGGAGAACATTGGCAATCTTCTTATGGCATGGAGATTCTTAATTACTTTTGTGGATGTTCTTGGGCTTTGGCCATTTACTCTCGATGAATTCGTTCAAGCTTTTCATGACTATGATTCTAGGTTGTTGGGTGAGATACATATTTCACTTCTAAGATCCATCATTAAAGACATTGAAGATGTTGCAAGAATACCCTCTATGGGGGTGGGAGCTAATCAGAACTGCGCTGCAAATCCTGGAGGCGGTCACCCTCAAATTGTAGAAGGGGCATATGCTTGGGGATTTGACATCAAAAGCTGGAAGTGCAACTTAAATCCACTGACATGGCCAGAAATATTGCGGCAATTTTCTGTATCAGCAGGATTTGGACCGCAACTGAAGAAGAGGGATGTTGAACCAGCTTATCTTCATGAGGACAATGAGGGTAATGATGTCAAGGATATAATTTCCAATTTACGCAGTGGAGTAGCTGTAAAAAATGCCTTCGCTATTATGCAAGAAAGGGGTTTTTCTAACCCTCGCAAATCAAGGCATTGCTTGACTCCTGGAACTGTTAAGTTCGCAGCATTTCATGTTCTTTCTCTTGAGGGGAGCAAGGGCCTTAACATATTAGAAGTTGCAGACAGGATTCAGAAATCAGGACTTCGGGATCTCACAACAAGCAAGACACCAGAAGCCTCGATAGCTGCTGCTTTGTCTAGGGACTCAAAACTATTTGAGAGAACTGCTCCTTCTACTTACTGTGTACGCGCTCCCTACAGAAAGGACACAAGTGATTCCGAGGCAGTACTTTCTGCAGCCAGAGAAAGAATTCAAATATTCAATAGTAGGATTTTTGATGTTGAAGGAGCTGATGAAGCTGAAAGAGACGAAGAATCTGAAAGTGATGCAGTAGAGGATCCTGAGTTTGATGATTTAGGCACTGAAATAAATCCAAAGATAGTAGCTCAGAATTCTGAAGAAGCAAGAAAAGTCAGTGACGGAATATCTTTGGAAAGTGGAAAAGGAAGTTACGTGGTTAGTAAAGCTCCAGGAGACCTTAGGAATGTCACAGAAGGAATTCCTTCAATCAATTCTGAAGCGTCCATCAAGGTTGAAGACACTGGTTGTTCCTTGGATTCTGTTGACGCTGCAGGAATCTGCAACAATGTAGCTAATCATGATCAAGAAGATACAGAGATTGATGATAGCAACCCTGGTGAGCCATGGGTTCAAGGACTTACAGAAGGGGAGTACTCTGATCTTAGTGTTGAGGAGCGCCTCAATGCACTTGCTGCATTAATTGGTGTGGCAATAGAAGGAAACTCGATTCGAATTGTTCTCGAGGAACGTTTAGAAGCTGCAAATGCTTTAAAGAAGCAAATGTGGGCAGTGGCGCAAGTTGATAAACGGCGTCTAAAAGAAGAACATGTCATCAAAATGCAATATACCCCTTTCATTGGGAACAAGACTGAGCAGAGCCTGACAATTCCTTCTTCAGAAAATAGGCAAAGTCCATCTCCTACCGTTGATGAGAAAAACATTGAGACGACGGTGAAGCTTTCCGTCCTGCAAGAGCAGATGGTTGATCCACAAAATGAGCAAAATTATATCAACAGTTTTCCTTCTGTAGGAAACCTCCAAATGCAGGAGTACTCTGTTGGTCCAGACAATCACCCATTTCAGCAACCCGGTCTTATTGCTGATAAGTCACACAAACAATTAAAATCTTATATTGGTCACAAAGCAGAGGAGATGTATGTTTATCGATCATTGCCTCTTGGTCAGGATCGTAGGCATAATAGATACTGGCAGTTTATTACATCTGCCTCTCGAAATGATCCTGGTTGTGGCAGGATCTTTGTTGAGCTGCATGACGGTCGTTGGAGGCTTATTGATTCTGAAGAGGGCTTTGATGGTCTTTTGGCATCTTTGGATGTGCGTGGGTATAGGGAATCCCATTTGCAGACAATGTTGCAGAAGACTGAAATATTCTTCAAGGAAACTGTTAGAAGAAACAAGTTGCATTCTAACCGGGGGAGGCATATCAAAGACACTGCTAAAACAGAAGATGTTGAAATGCCTTCTGGTTATGATTGCAGTGGTGGTACAGATAGCCCTACCAGCTCTGTTTCTGTTGCTGACTCCGATATGTTGGAGAGCTCAATGACTTTTTCAATTGAGCTAGGAAAGAACGAAACTGAGAAAACTGGTGCTTTAAACAGATATCAAGATCTGGAGAGGTGGATTTTGAAAGAAAGTGTTGGTTCTTCAATATTATGTGCTGACAAAAATGGGAAAAAAAGGTGTCCCCAGCTACTGGACATCTGTAATTCTTGTCGTGGAATTTTTTATTTTGAAGAGAATCACTGTCATTCTTGCCATAGAACTTTTGGTAAGGGCGAAATAGATTTTTCACAACATGTGGTACTGTGTAAAGAGAAACTGAAGTTGAATTCTGATTGTAATTTACGTGGCTTGAGTTCTTCTCCCCTTAGGATCAGGTTGCTGAAGGTGCTATTAGCTTTGACTGAGGTTTCTGTTCCATTAGAAGCTCTTCAACCTCTTTGGACCGACATGAACCGTAAATCTTGGGGTAGAAAGTTGCATTCCTCGTCAACAGCTGAAGACCTTCTCCAGGTTCTGGCATCGTTGGAGAGTGCTGTAAAGATAGAATATTTATCTTCAAACTTTGAGACTACCGGTGAGCTGCTATATTCCTCAAATGAAAAAGGACGTGTTACTAGCAATTCTTCTTCTCCTGATAGCGTTGCTGTGCTTCCATGGATACCACTTACAACAGCTGCTGTGGCTCTTAGGCTCATGGAGTTTGATATGGCCATCTCAAACATGCTACAGCAGAAGCTGGCGACTCAGAAGGACAAGGAATCTGGGGATTTTAAAAAGCTTCCAACAAGATCTGCTGTCATGAAAAGTTCCAAGAATGAGGAGATCTCAGGAACTCCACATCAATCTGAAGATTCCAAAGAAGGCAACTGGGAGTATCTGGGGAGTGGACTTACCGGCTCTGGCCATGGACAAGGCCGTGGTCGAACTCGTGGTAGGCGAGTGCCAAAAAAGGCAATTGGTTTAAGGGGCAATCCTAGGAAGAAGAGTAGAGTTACAGCCAAAGATAAATTAGTACAGGTGCAAGTACTGAAATGGAAAGGCAGACCACGTGGACGAGGAGGGCGAAAGCGTGGAAATCGGAGCATTAGAGGCAAGGAGACAACGTTTAACAGGATAATTAAGATTGGTGGGGAGAGAACTGGCCCCAAAGACAGTGTCTATTATAAATCACCAGAGGACTTGGTTGAGGAGAATTGGAACGTAGGTGAAACTGCGGCAGAAAATGCAAGCGGTTCTGGAAGGTCAGAGTATGAGGTGGAAAATGGGGATGCATCAGGAGATGAATTTGATCATGTGCATGTGGATGACTATGCCGGTGGCTTCAATGGCAAGTCTGATGACTTATTGGAGGGAGGCGAATATAACGTGGAGGGTGACGAAGATGATGTCGACGATGAGGTGGATGACGATGAAGGTGAAGGAGCACAAGATTCAAAAGGGGATTTTGATGGTGCAAGATATTATCAATGGAGAGTGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

1707

Amino Acids

191.8

Weight (kDa)

5.68

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 22 - 78 2.4e-16 Homeodomain
DDT PF02791 513 - 568 1.2e-18 DDT domain
HARE-HTH PF05066 694 - 761 1.2e-17 HB1, ASXL, restriction endonuclease HTH domain
WHIM1 PF15612 910 - 953 3.8e-10 WSTF, HB1, Itc1p, MBD9 motif 1
WSD PF15613 1093 - 1166 1.7e-21 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4806
AccB7I CCANNNNNTGG 2 cut(s) 3832, 4156
AccI GTMKAC 1 cut(s) 5031
AccII CGCG 1 cut(s) 2283
AclI AACGTT 2 cut(s) 2863, 4745
AcoI YGGCCR 5 cut(s) 506, 1604, 1859, 4350, 4543
AcsI RAATTY 8 cut(s) 1211, 1622, 2343, 2485, 2592, 3858, 3967, 4925
AcvI CACGTG 1 cut(s) 4691
AcyI GRCGYC 2 cut(s) 239, 2926
AflIII ACRYGT 3 cut(s) 2941, 3934, 4249
AgeI ACCGGT 1 cut(s) 4214
AjiI CACGTC 1 cut(s) 4250
AjnI CCWGG 8 cut(s) 445, 1365, 1768, 2077, 2563, 2728, 3355, 4149
AleI CACNNNNGTG 1 cut(s) 981
Alw21I GWGCWC 4 cut(s) 37, 886, 3677, 5068
Alw26I GTCTC 8 cut(s) 1057, 1243, 1422, 2394, 2562, 3053, 4202, 4733
AlwNI CAGNNNCTG 5 cut(s) 2995, 3832, 4156, 4319, 4378
Ama87I CYCGRG 2 cut(s) 357, 2855
AoxI GGCC 9 cut(s) 410, 506, 1604, 1859, 2131, 4350, 4543, 4555, 4783
ApoI RAATTY 8 cut(s) 1211, 1622, 2343, 2485, 2592, 3858, 3967, 4925
ArsI GACNNNNNNTTYG 4 cut(s) 4782, 4814, 5013, 5045
AseI ATTAAT 2 cut(s) 894, 2813
AsiGI ACCGGT 1 cut(s) 4214
Asp700I GAANNNNTTC 6 cut(s) 1626, 2343, 2592, 2596, 4068, 4143
AspA2I CCTAGG 1 cut(s) 4616
AspLEI GCGC 7 cut(s) 75, 382, 452, 1760, 2285, 2793, 2911
AspS9I GGNCC 7 cut(s) 226, 410, 1901, 2131, 3176, 4083, 4784
AsuC2I CCSGG 3 cut(s) 250, 3204, 3548
AsuII TTCGAA 1 cut(s) 2845
AvaI CYCGRG 2 cut(s) 357, 2855
AvaII GGWCC 4 cut(s) 226, 1901, 3176, 4083
AvrII CCTAGG 1 cut(s) 4616
AxyI CCTNAGG 3 cut(s) 1175, 2573, 4007
BalI TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
BamHI GGATCC 1 cut(s) 2431
BanII GRGCYC 2 cut(s) 37, 3677
BauI CACGAG 1 cut(s) 4569
BbrPI CACGTG 1 cut(s) 4691
BbsI GAAGAC 4 cut(s) 89, 2637, 3500, 4146
Bbv12I GWGCWC 4 cut(s) 37, 886, 3677, 5068
BceAI ACGGC 2 cut(s) 2939, 4542
BcgI CGANNNNNNTGC 2 cut(s) 3374, 3408
BciT130I CCWGG 8 cut(s) 447, 1367, 1770, 2079, 2565, 2730, 3357, 4151
BciVI GTATCC 2 cut(s) 1023, 4293
BclI TGATCA 2 cut(s) 2695, 4930
BcnI CCSGG 3 cut(s) 250, 3204, 3548
BcoDI GTCTC 8 cut(s) 1057, 1243, 1422, 2394, 2562, 3053, 4202, 4733
BfaI CTAG 5 cut(s) 1653, 2232, 3698, 4257, 4617
BfmI CTRYAG 6 cut(s) 194, 2290, 2328, 2664, 3141, 4367
BfoI RGCGCY 1 cut(s) 2794
BfuI GTATCC 2 cut(s) 1023, 4293
BglII AGATCT 3 cut(s) 3745, 4430, 4464
BlnI CCTAGG 1 cut(s) 4616
BlpI GCTNAGC 2 cut(s) 126, 156
BmcAI AGTACT 4 cut(s) 2322, 2768, 3167, 4668
Bme18I GGWCC 4 cut(s) 226, 1901, 3176, 4083
BmeT110I CYCGRG 2 cut(s) 357, 2855
BmgBI CACGTC 1 cut(s) 4250
BmgT120I GGNCC 7 cut(s) 226, 410, 1901, 2131, 3176, 4083, 4784
BmiI GGNNCC 4 cut(s) 393, 460, 2433, 4786
BmrI ACTGGG 2 cut(s) 428, 4519
BmsI GCATC 7 cut(s) 859, 1397, 2410, 3449, 4169, 4900, 4922
BmuI ACTGGG 2 cut(s) 428, 4519
BpiI GAAGAC 4 cut(s) 89, 2637, 3500, 4146
BplI GAGNNNNNCTC 6 cut(s) 2245, 2277, 3985, 4017, 4451, 4483
BpmI CTGGAG 6 cut(s) 309, 1217, 1791, 2547, 3770, 4133
Bpu10I CCTNAGC 3 cut(s) 36, 42, 48
Bpu1102I GCTNAGC 2 cut(s) 126, 156
Bpu14I TTCGAA 1 cut(s) 2845
BpuEI CTTGAG 3 cut(s) 128, 2138, 4012
BpuMI CCSGG 3 cut(s) 250, 3204, 3548
Bsa29I ATCGAT 1 cut(s) 3280
BsaAI YACGTR 4 cut(s) 1034, 2548, 3986, 4691
BsaHI GRCGYC 2 cut(s) 239, 2926
BsaI GGTCTC 1 cut(s) 2562
BsaWI WCCGGW 2 cut(s) 213, 4214
BsaXI ACNNNNNCTCC 4 cut(s) 1989, 2019, 4730, 4760
Bse118I RCCGGY 3 cut(s) 4214, 4535, 4955
Bse21I CCTNAGG 3 cut(s) 1175, 2573, 4007
Bse3DI GCAATG 3 cut(s) 838, 2065, 3284
BseBI CCWGG 8 cut(s) 447, 1367, 1770, 2079, 2565, 2730, 3357, 4151
BseCI ATCGAT 1 cut(s) 3280
BseMI GCAATG 3 cut(s) 838, 2065, 3284
BseRI GAGGAG 9 cut(s) 1132, 1175, 1178, 1550, 2801, 3278, 4475, 4713, 4844
BseYI CCCAGC 2 cut(s) 385, 3825
BsgI GTGCAG 1 cut(s) 1511
Bsh1236I CGCG 1 cut(s) 2283
Bsh1285I CGRYCG 2 cut(s) 187, 3394
BshFI GGCC 9 cut(s) 412, 508, 1606, 1861, 2133, 4352, 4545, 4557, 4785
BshTI ACCGGT 1 cut(s) 4214
BshVI ATCGAT 1 cut(s) 3280
BsiEI CGRYCG 2 cut(s) 187, 3394
BsiHKAI GWGCWC 4 cut(s) 37, 886, 3677, 5068
BsiHKCI CYCGRG 2 cut(s) 357, 2855
BsiSI CCGG 8 cut(s) 214, 249, 275, 3204, 3547, 4215, 4536, 4956
BslFI GGGAC 2 cut(s) 2249, 3807
BsmAI GTCTC 8 cut(s) 1057, 1243, 1422, 2394, 2562, 3053, 4202, 4733
BsmBI CGTCTC 2 cut(s) 2394, 3053
BsmFI GGGAC 2 cut(s) 2249, 3807
BsmI GAATGC 3 cut(s) 1367, 3538, 4120
BsnI GGCC 9 cut(s) 412, 508, 1606, 1861, 2133, 4352, 4545, 4557, 4785
Bso31I GGTCTC 1 cut(s) 2562
BsoBI CYCGRG 2 cut(s) 357, 2855
Bsp119I TTCGAA 1 cut(s) 2845
Bsp1286I GDGCHC 4 cut(s) 37, 886, 3677, 5068
Bsp1720I GCTNAGC 2 cut(s) 126, 156
Bsp19I CCATGG 4 cut(s) 864, 2738, 4295, 4546
BspANI GGCC 9 cut(s) 412, 508, 1606, 1861, 2133, 4352, 4545, 4557, 4785
BspDI ATCGAT 1 cut(s) 3280
BspFNI CGCG 1 cut(s) 2283
BspHI TCATGA 5 cut(s) 940, 1639, 1942, 2692, 4440
BspLI GGNNCC 4 cut(s) 393, 460, 2433, 4786
BspMAI CTGCAG 2 cut(s) 2332, 2668
BspQI GCTCTTC 2 cut(s) 1071, 4074
BspT104I TTCGAA 1 cut(s) 2845
BspTNI GGTCTC 1 cut(s) 2562
BsrDI GCAATG 3 cut(s) 838, 2065, 3284
BsrFI RCCGGY 3 cut(s) 4214, 4535, 4955
BssAI RCCGGY 3 cut(s) 4214, 4535, 4955
BssNI GRCGYC 2 cut(s) 239, 2926
BssSI CACGAG 1 cut(s) 4569
BssT1I CCWWGG 7 cut(s) 864, 1520, 2646, 2738, 4295, 4546, 4616
Bst2BI CACGAG 1 cut(s) 4569
Bst2UI CCWGG 8 cut(s) 447, 1367, 1770, 2079, 2565, 2730, 3357, 4151
Bst6I CTCTTC 6 cut(s) 1071, 1910, 3411, 3867, 4074, 4619
BstACI GRCGYC 2 cut(s) 239, 2926
BstAPI GCANNNNNTGC 2 cut(s) 2807, 4865
BstBAI YACGTR 4 cut(s) 1034, 2548, 3986, 4691
BstBI TTCGAA 1 cut(s) 2845
BstC8I GCNNGC 3 cut(s) 114, 4380, 4870
BstDSI CCRYGG 5 cut(s) 864, 2738, 4295, 4546, 4558
BstEII GGTNACC 2 cut(s) 797, 1778
BstENI CCTNNNNNAGG 2 cut(s) 3141, 4148
BstFNI CGCG 1 cut(s) 2283
BstH2I RGCGCY 1 cut(s) 2794
BstHHI GCGC 7 cut(s) 75, 382, 452, 1760, 2285, 2793, 2911
BstMAI GTCTC 8 cut(s) 1057, 1243, 1422, 2394, 2562, 3053, 4202, 4733
BstMCI CGRYCG 2 cut(s) 187, 3394
BstNI CCWGG 8 cut(s) 447, 1367, 1770, 2079, 2565, 2730, 3357, 4151
BstNSI RCATGY 4 cut(s) 2945, 3938, 4366, 4943
BstPI GGTNACC 2 cut(s) 797, 1778
BstSFI CTRYAG 6 cut(s) 194, 2290, 2328, 2664, 3141, 4367
BstSNI TACGTA 1 cut(s) 1034
BstUI CGCG 1 cut(s) 2283
BstV2I GAAGAC 4 cut(s) 89, 2637, 3500, 4146
BstX2I RGATCY 8 cut(s) 175, 1688, 2182, 2431, 3369, 3745, 4430, 4464
BstXI CCANNNNNNTGG 3 cut(s) 761, 934, 1857
BstYI RGATCY 8 cut(s) 175, 1688, 2182, 2431, 3369, 3745, 4430, 4464
Bsu15I ATCGAT 1 cut(s) 3280
Bsu36I CCTNAGG 3 cut(s) 1175, 2573, 4007
BsuI GTATCC 2 cut(s) 1023, 4293
BsuRI GGCC 9 cut(s) 412, 508, 1606, 1861, 2133, 4352, 4545, 4557, 4785
BsuTUI ATCGAT 1 cut(s) 3280
BtgI CCRYGG 5 cut(s) 864, 2738, 4295, 4546, 4558
BtrI CACGTC 1 cut(s) 4250
BtsI GCAGTG 4 cut(s) 1999, 2910, 3567, 3619
Cac8I GCNNGC 3 cut(s) 114, 4380, 4870
CaiI CAGNNNCTG 5 cut(s) 2995, 3832, 4156, 4319, 4378
CciI TCATGA 5 cut(s) 940, 1639, 1942, 2692, 4440
CfoI GCGC 7 cut(s) 75, 382, 452, 1760, 2285, 2793, 2911
Cfr10I RCCGGY 3 cut(s) 4214, 4535, 4955
Cfr13I GGNCC 7 cut(s) 226, 410, 1901, 2131, 3176, 4083, 4784
ClaI ATCGAT 1 cut(s) 3280
CseI GACGC 4 cut(s) 247, 2604, 2669, 2915
CspAI ACCGGT 1 cut(s) 4214
DraI TTTAAA 3 cut(s) 2886, 3732, 4414
EaeI YGGCCR 5 cut(s) 506, 1604, 1859, 4350, 4543
Eam1104I CTCTTC 6 cut(s) 1071, 1910, 3411, 3867, 4074, 4619
EarI CTCTTC 6 cut(s) 1071, 1910, 3411, 3867, 4074, 4619
Ecl136II GAGCTC 2 cut(s) 35, 3675
Eco105I TACGTA 1 cut(s) 1034
Eco130I CCWWGG 7 cut(s) 864, 1520, 2646, 2738, 4295, 4546, 4616
Eco24I GRGCYC 2 cut(s) 37, 3677
Eco31I GGTCTC 1 cut(s) 2562
Eco32I GATATC 2 cut(s) 1057, 3740
Eco47I GGWCC 4 cut(s) 226, 1901, 3176, 4083
Eco53kI GAGCTC 2 cut(s) 35, 3675
Eco72I CACGTG 1 cut(s) 4691
Eco81I CCTNAGG 3 cut(s) 1175, 2573, 4007
Eco88I CYCGRG 2 cut(s) 357, 2855
Eco91I GGTNACC 2 cut(s) 797, 1778
EcoICRI GAGCTC 2 cut(s) 35, 3675
EcoNI CCTNNNNNAGG 2 cut(s) 3141, 4148
EcoO109I RGGNCCY 1 cut(s) 2131
EcoO65I GGTNACC 2 cut(s) 797, 1778
EcoRI GAATTC 5 cut(s) 1622, 2343, 2485, 2592, 3967
EcoRII CCWGG 8 cut(s) 445, 1365, 1768, 2077, 2563, 2728, 3355, 4149
EcoRV GATATC 2 cut(s) 1057, 3740
EcoT14I CCWWGG 7 cut(s) 864, 1520, 2646, 2738, 4295, 4546, 4616
EcoT22I ATGCAT 1 cut(s) 4915
EcoT38I GRGCYC 2 cut(s) 37, 3677
ErhI CCWWGG 7 cut(s) 864, 1520, 2646, 2738, 4295, 4546, 4616
Esp3I CGTCTC 2 cut(s) 2394, 3053
FalI AAGNNNNNCTT 2 cut(s) 1826, 1858
FaqI GGGAC 2 cut(s) 2249, 3807
FauI CCCGC 2 cut(s) 304, 996
FauNDI CATATG 1 cut(s) 1804
FbaI TGATCA 2 cut(s) 2695, 4930
FblI GTMKAC 1 cut(s) 5031
FriOI GRGCYC 2 cut(s) 37, 3677
FspBI CTAG 5 cut(s) 1653, 2232, 3698, 4257, 4617
GlaI GCGC 7 cut(s) 74, 381, 451, 1759, 2284, 2792, 2910
GsaI CCCAGC 2 cut(s) 389, 3829
GsuI CTGGAG 6 cut(s) 309, 1217, 1791, 2547, 3770, 4133
HaeII RGCGCY 1 cut(s) 2794
HaeIII GGCC 9 cut(s) 412, 508, 1606, 1861, 2133, 4352, 4545, 4557, 4785
HapII CCGG 8 cut(s) 214, 249, 275, 3204, 3547, 4215, 4536, 4956
HgaI GACGC 4 cut(s) 247, 2604, 2669, 2915
HhaI GCGC 7 cut(s) 75, 382, 452, 1760, 2285, 2793, 2911
Hin1I GRCGYC 2 cut(s) 239, 2926
Hin6I GCGC 7 cut(s) 73, 380, 450, 1758, 2283, 2791, 2909
HinP1I GCGC 7 cut(s) 73, 380, 450, 1758, 2283, 2791, 2909
HincII GTYRAC 3 cut(s) 2659, 4131, 5032
HindII GTYRAC 3 cut(s) 2659, 4131, 5032
HindIII AAGCTT 4 cut(s) 114, 1632, 3071, 4418
HpaII CCGG 8 cut(s) 214, 249, 275, 3204, 3547, 4215, 4536, 4956
Hpy166II GTNNAC 8 cut(s) 656, 1193, 2279, 2659, 4131, 4529, 4694, 5032
Hpy8I GTNNAC 8 cut(s) 656, 1193, 2279, 2659, 4131, 4529, 4694, 5032
Hpy99I CGWCG 4 cut(s) 142, 241, 3067, 5036
HpyCH4IV ACGT 9 cut(s) 1033, 2547, 2863, 3985, 4249, 4690, 4745, 4842, 5007
HpySE526I ACGT 9 cut(s) 1033, 2547, 2863, 3985, 4249, 4690, 4745, 4842, 5007
Hsp92I GRCGYC 2 cut(s) 239, 2926
HspAI GCGC 7 cut(s) 73, 380, 450, 1758, 2283, 2791, 2909
Ksp22I TGATCA 2 cut(s) 2695, 4930
LguI GCTCTTC 2 cut(s) 1071, 4074
LweI GCATC 7 cut(s) 859, 1397, 2410, 3449, 4169, 4900, 4922
MaeI CTAG 5 cut(s) 1653, 2232, 3698, 4257, 4617
MaeII ACGT 9 cut(s) 1033, 2547, 2863, 3985, 4249, 4690, 4745, 4842, 5007
MfeI CAATTG 2 cut(s) 3690, 4596
MflI RGATCY 8 cut(s) 175, 1688, 2182, 2431, 3369, 3745, 4430, 4464
MhlI GDGCHC 4 cut(s) 37, 886, 3677, 5068
MlsI TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
MluNI TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
MlyI GAGTC 8 cut(s) 79, 152, 263, 1235, 2068, 2231, 3650, 4378
MmeI TCCRAC 6 cut(s) 78, 120, 3377, 3648, 4146, 4448
Mox20I TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
Mph1103I ATGCAT 1 cut(s) 4915
MroXI GAANNNNTTC 6 cut(s) 1626, 2343, 2592, 2596, 4068, 4143
MscI TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
MslI CAYNNNNRTG 9 cut(s) 648, 717, 879, 981, 1644, 1855, 2951, 4938, 4944
Msp20I TGGCCA 5 cut(s) 508, 1606, 1861, 4352, 4545
MspA1I CMGCKG 4 cut(s) 125, 385, 4136, 4316
MspI CCGG 8 cut(s) 214, 249, 275, 3204, 3547, 4215, 4536, 4956
MunI CAATTG 2 cut(s) 3690, 4596
Mva1269I GAATGC 3 cut(s) 1367, 3538, 4120
MvaI CCWGG 8 cut(s) 447, 1367, 1770, 2079, 2565, 2730, 3357, 4151
MvnI CGCG 1 cut(s) 2283
NciI CCSGG 3 cut(s) 250, 3204, 3548
NcoI CCATGG 4 cut(s) 864, 2738, 4295, 4546
NdeI CATATG 1 cut(s) 1804
NlaIV GGNNCC 4 cut(s) 393, 460, 2433, 4786
NmuCI GTSAC 8 cut(s) 777, 797, 1778, 2510, 2581, 3222, 3251, 5015
NsiI ATGCAT 1 cut(s) 4915
NspI RCATGY 4 cut(s) 2945, 3938, 4366, 4943
NspV TTCGAA 1 cut(s) 2845
OliI CACNNNNGTG 1 cut(s) 981
PaeR7I CTCGAG 2 cut(s) 357, 2855
PagI TCATGA 5 cut(s) 940, 1639, 1942, 2692, 4440
PciI ACATGT 2 cut(s) 2941, 3934
PciSI GCTCTTC 2 cut(s) 1071, 4074
PcsI WCGNNNNNNNCGW 3 cut(s) 1623, 4576, 4702
PctI GAATGC 3 cut(s) 1367, 3538, 4120
PdmI GAANNNNTTC 6 cut(s) 1626, 2343, 2592, 2596, 4068, 4143
PflFI GACNNNGTC 1 cut(s) 4796
PflMI CCANNNNNTGG 2 cut(s) 3832, 4156
PfoI TCCNGGA 3 cut(s) 1768, 2077, 2563
PinAI ACCGGT 1 cut(s) 4214
Ple19I CGATCG 1 cut(s) 187
PleI GAGTC 8 cut(s) 79, 151, 263, 1234, 2068, 2231, 3650, 4378
PmaCI CACGTG 1 cut(s) 4691
PmlI CACGTG 1 cut(s) 4691
PpsI GAGTC 8 cut(s) 79, 151, 263, 1234, 2068, 2231, 3650, 4378
Ppu21I YACGTR 4 cut(s) 1034, 2548, 3986, 4691
PscI ACATGT 2 cut(s) 2941, 3934
PshBI ATTAAT 2 cut(s) 894, 2813
PsiI TTATAA 1 cut(s) 4806
Psp124BI GAGCTC 2 cut(s) 37, 3677
Psp1406I AACGTT 2 cut(s) 2863, 4745
Psp6I CCWGG 8 cut(s) 445, 1365, 1768, 2077, 2563, 2728, 3355, 4149
PspCI CACGTG 1 cut(s) 4691
PspEI GGTNACC 2 cut(s) 797, 1778
PspFI CCCAGC 2 cut(s) 385, 3825
PspGI CCWGG 8 cut(s) 445, 1365, 1768, 2077, 2563, 2728, 3355, 4149
PspN4I GGNNCC 4 cut(s) 393, 460, 2433, 4786
PspPI GGNCC 7 cut(s) 226, 410, 1901, 2131, 3176, 4083, 4784
PspXI VCTCGAGB 1 cut(s) 357
PstI CTGCAG 2 cut(s) 2332, 2668
PstNI CAGNNNCTG 5 cut(s) 2995, 3832, 4156, 4319, 4378
PsuI RGATCY 8 cut(s) 175, 1688, 2182, 2431, 3369, 3745, 4430, 4464
PsyI GACNNNGTC 1 cut(s) 4796
PvuI CGATCG 1 cut(s) 187
PvuII CAGCTG 4 cut(s) 125, 385, 4136, 4316
RseI CAYNNNNRTG 9 cut(s) 648, 717, 879, 981, 1644, 1855, 2951, 4938, 4944
SacI GAGCTC 2 cut(s) 37, 3677
SalI GTCGAC 1 cut(s) 5030
SapI GCTCTTC 2 cut(s) 1071, 4074
Sau96I GGNCC 7 cut(s) 226, 410, 1901, 2131, 3176, 4083, 4784
ScaI AGTACT 4 cut(s) 2322, 2768, 3167, 4668
SchI GAGTC 8 cut(s) 79, 152, 263, 1235, 2068, 2231, 3650, 4378
SduI GDGCHC 4 cut(s) 37, 886, 3677, 5068
SfaNI GCATC 7 cut(s) 859, 1397, 2410, 3449, 4169, 4900, 4922
SfcI CTRYAG 6 cut(s) 194, 2290, 2328, 2664, 3141, 4367
Sfr274I CTCGAG 2 cut(s) 357, 2855
SfuI TTCGAA 1 cut(s) 2845
SinI GGWCC 4 cut(s) 226, 1901, 3176, 4083
SlaI CTCGAG 2 cut(s) 357, 2855
SmiMI CAYNNNNRTG 9 cut(s) 648, 717, 879, 981, 1644, 1855, 2951, 4938, 4944
SmlI CTYRAG 5 cut(s) 107, 357, 2117, 2855, 3991
SmoI CTYRAG 5 cut(s) 107, 357, 2117, 2855, 3991
SnaBI TACGTA 1 cut(s) 1034
SspI AATATT 6 cut(s) 859, 1869, 2352, 3504, 3789, 4190
SspMI CTAG 5 cut(s) 1653, 2232, 3698, 4257, 4617
SstI GAGCTC 2 cut(s) 37, 3677
StyI CCWWGG 7 cut(s) 864, 1520, 2646, 2738, 4295, 4546, 4616
TaiI ACGT 9 cut(s) 1036, 2550, 2866, 3988, 4252, 4693, 4748, 4845, 5010
TaqII GACCGA 1 cut(s) 4100
TatI WGTACW 6 cut(s) 1469, 2320, 2766, 3165, 4654, 4666
TauI GCSGC 8 cut(s) 259, 325, 328, 331, 334, 337, 1876, 4859
TseFI GTSAC 8 cut(s) 777, 797, 1778, 2510, 2581, 3222, 3251, 5015
Tsp45I GTSAC 8 cut(s) 777, 797, 1778, 2510, 2581, 3222, 3251, 5015
TspGWI ACGGA 4 cut(s) 426, 454, 2529, 3067
Tth111I GACNNNGTC 1 cut(s) 4796
Van91I CCANNNNNTGG 2 cut(s) 3832, 4156
VpaK11BI GGWCC 4 cut(s) 226, 1901, 3176, 4083
VspI ATTAAT 2 cut(s) 894, 2813
XagI CCTNNNNNAGG 2 cut(s) 3141, 4148
XapI RAATTY 8 cut(s) 1211, 1622, 2343, 2485, 2592, 3858, 3967, 4925
XceI RCATGY 4 cut(s) 2945, 3938, 4366, 4943
XcmI CCANNNNNNNNNTGG 1 cut(s) 3902
XhoI CTCGAG 2 cut(s) 357, 2855
XmaJI CCTAGG 1 cut(s) 4616
XmiI GTMKAC 1 cut(s) 5031
XmnI GAANNNNTTC 6 cut(s) 1626, 2343, 2592, 2596, 4068, 4143
XspI CTAG 5 cut(s) 1653, 2232, 3698, 4257, 4617
ZrmI AGTACT 4 cut(s) 2322, 2768, 3167, 4668
Zsp2I ATGCAT 1 cut(s) 4915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.