Rh2CG366400

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0008507
Physical Location & Seq
Reverse (-)
49821975 .. 49824584
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG366400.1

Sequence Viewer

Length: 1323 bp
ATGGCGGTGATTTCAGTGAAGCCCATGTTCACCGTAGTGGTGGTCACTCTCTCTCTCATCCTTGCCGTCCTCGTCTTCTCCCCCACTTCGCCTTTCTACCAATCCCCCCTCTCTCTTGCTTCACCCCAAAGAAAATTGGATATATGGAGCGTTGGGAGGTTGGTAGAGTGGAGAACTTGCAAGTGGTGGCTACAAGGACATGTCACCGCTCTGCCATCAAAGAGTAATGGATTCATTCGAGTGGATTGCTATGGTGGCCTTAATCAGATGAGAAGAGATTTATGTGATGGTGTTGGTGTTGCCCGTCTTTTAAATGCAACTCTTGTTTTGCCAAAGTTTGAGGTGGCTGCTTATTGGAATGAATCAAGTGGTTTTGCAGATATCTTTGATGTCGACTACTTCATTCAACGGATGAATGGCTTCATCAGTGTTGTCAAAGAGTTACCATCTGAGATTGCATCAAAAGAACCCTTCCATGTGGATTGTAGCAAACGCAAAGGCCAATTTGATTACATAGAAAGTGTTCTTCCATCCCTATTAGAACATCATTATATTTCAATCACGCCAGCGATGAGCCAAAGAAGGGATAGGTATCCTCAGTATGCAAAAGCTGCCCTTTGCCAAGCATGTTACAGTGCTTTACGCCTCACAAAATCCCTGGAGAAGAAAGCCTCTGAGCTTCTTGATGCCATACCTAAACCTTTTCTCTCACTTCACCTTCGTTTTGAGCCTGATATGGTAGCTTACAGTCAATGTGAATATCCATACCTAGCTCCTGCTTCTATTGAAGCCATCAAGGCAGCACAGGGAGTTAGAAAGCCATGGACCGGAGAGCTTGCCCAAATTTGGAGGAAACGAGGAAAATGTCCTCTTACGCCTAATGAGACAGCTTTCATACTTCAAGTGCTTTCCATCCCAACAAATACAAACATTTATCTGGCAGCTGGGGACGGTCTGATGGAAAGTGAAGGCTTAACATCTATTTACACCAATGTAGTTACCAAATCTAGCCTACTTAGTGGGGAGGATTTCAAAAGCATGCATGGAAACACGAAAGCGGCATTGGATTACCATGTGTCTATTAACAGTGATTCATATATAGGAACGTATTTTGGAAATATGGATAAGATGGTTGCAGCAATGCGAGCTTCTAATGGCTTGTACAAGACTCTCTTCTTAAGCAGAAGAGCTTTTGCTGAACTCACTTCTCAAGGTTTGAGAGGTAAGGAATTGGAGCATGCACTGTGGAAGGCTCACAAAGATGATTTTGTCATGGGAAGAGGATCTGCTTTGCCTGATTGCTTTTGTGAGTTCAAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

440

Amino Acids

49.26

Weight (kDa)

8.75

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 78 - 383 3.2e-62 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 393
AciI CCGC 3 cut(s) 5, 207, 1058
AclWI GGATC 1 cut(s) 1291
AcsI RAATTY 1 cut(s) 843
AfaI GTAC 1 cut(s) 1163
AfiI CCNNNNNNNGG 3 cut(s) 583, 827, 846
AflII CTTAAG 1 cut(s) 1177
AflIII ACRYGT 1 cut(s) 199
AgsI TTSAA 6 cut(s) 407, 558, 788, 902, 1033, 1315
AjnI CCWGG 1 cut(s) 657
AjuI GAANNNNNNNTTGG 2 cut(s) 1046, 1078
AleI CACNNNNGTG 1 cut(s) 35
AluBI AGCT 9 cut(s) 611, 679, 743, 773, 835, 890, 944, 1148, 1190
AluI AGCT 9 cut(s) 611, 679, 743, 773, 835, 890, 944, 1148, 1190
Alw26I GTCTC 1 cut(s) 878
AlwI GGATC 1 cut(s) 1291
AoxI GGCC 2 cut(s) 256, 499
ApeKI GCWGC 5 cut(s) 347, 611, 800, 941, 1136
ApoI RAATTY 1 cut(s) 843
Asp700I GAANNNNTTC 2 cut(s) 419, 522
AspS9I GGNCC 1 cut(s) 825
AsuHPI GGTGA 5 cut(s) 19, 22, 114, 196, 707
AvaII GGWCC 1 cut(s) 825
BbsI GAAGAC 1 cut(s) 67
BbvI GCAGC 5 cut(s) 334, 598, 812, 953, 1148
BccI CCATC 8 cut(s) 223, 281, 454, 538, 800, 920, 952, 1123
BceAI ACGGC 1 cut(s) 50
BcgI CGANNNNNNTGC 2 cut(s) 228, 262
BciT130I CCWGG 1 cut(s) 659
BciVI GTATCC 1 cut(s) 603
BcoDI GTCTC 1 cut(s) 878
BfaI CTAG 2 cut(s) 770, 1008
BfrI CTTAAG 1 cut(s) 1177
BfuI GTATCC 1 cut(s) 603
BglI GCCNNNNNGGC 1 cut(s) 797
BisI GCNGC 6 cut(s) 348, 612, 801, 942, 1059, 1137
BlsI GCNGC 6 cut(s) 349, 613, 802, 943, 1060, 1138
Bme1390I CCNGG 1 cut(s) 659
Bme18I GGWCC 1 cut(s) 825
BmgT120I GGNCC 1 cut(s) 825
BmrFI CCNGG 1 cut(s) 659
BmsI GCATC 2 cut(s) 467, 676
BpiI GAAGAC 1 cut(s) 67
BpmI CTGGAG 1 cut(s) 680
BpuEI CTTGAG 1 cut(s) 1194
BsaBI GATNNNNATC 1 cut(s) 591
BsaJI CCNNGG 2 cut(s) 657, 821
BsaWI WCCGGW 1 cut(s) 827
Bsc4I CCNNNNNNNGG 3 cut(s) 583, 827, 846
Bse3DI GCAATG 1 cut(s) 1146
Bse8I GATNNNNATC 1 cut(s) 591
BseBI CCWGG 1 cut(s) 659
BseDI CCNNGG 2 cut(s) 657, 821
BseGI GGATG 4 cut(s) 57, 417, 530, 912
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 3 cut(s) 583, 827, 846
BseMI GCAATG 1 cut(s) 1146
BseMII CTCAG 3 cut(s) 441, 611, 666
BseXI GCAGC 5 cut(s) 334, 598, 812, 953, 1148
BseYI CCCAGC 1 cut(s) 944
BshFI GGCC 2 cut(s) 258, 501
BsiSI CCGG 1 cut(s) 828
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 3 cut(s) 583, 827, 846
BsmAI GTCTC 1 cut(s) 878
BsmFI GGGAC 1 cut(s) 962
BsnI GGCC 2 cut(s) 258, 501
Bsp1407I TGTACA 1 cut(s) 1161
Bsp143I GATC 1 cut(s) 1283
Bsp19I CCATGG 1 cut(s) 821
BspACI CCGC 3 cut(s) 5, 207, 1058
BspANI GGCC 2 cut(s) 258, 501
BspCNI CTCAG 3 cut(s) 442, 610, 667
BspPI GGATC 1 cut(s) 1291
BspQI GCTCTTC 1 cut(s) 1180
BspTI CTTAAG 1 cut(s) 1177
BsrBI CCGCTC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 1146
BsrGI TGTACA 1 cut(s) 1161
BssECI CCNNGG 2 cut(s) 657, 821
BssMI GATC 1 cut(s) 1283
BssT1I CCWWGG 1 cut(s) 821
Bst2UI CCWGG 1 cut(s) 659
Bst4CI ACNGT 6 cut(s) 34, 635, 749, 953, 1088, 1245
Bst6I CTCTTC 4 cut(s) 268, 1178, 1180, 1273
BstAFI CTTAAG 1 cut(s) 1177
BstAPI GCANNNNNTGC 1 cut(s) 611
BstAUI TGTACA 1 cut(s) 1161
BstC8I GCNNGC 5 cut(s) 567, 837, 1040, 1146, 1239
BstDEI CTNAG 4 cut(s) 450, 597, 675, 1016
BstDSI CCRYGG 1 cut(s) 821
BstF5I GGATG 4 cut(s) 57, 417, 530, 912
BstKTI GATC 1 cut(s) 1286
BstMAI GTCTC 1 cut(s) 878
BstMBI GATC 1 cut(s) 1283
BstMWI GCNNNNNNNGC 4 cut(s) 255, 611, 797, 1145
BstNI CCWGG 1 cut(s) 659
BstNSI RCATGY 4 cut(s) 203, 630, 1042, 1241
BstSCI CCNGG 1 cut(s) 657
BstV1I GCAGC 5 cut(s) 334, 598, 812, 953, 1148
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 1283
BstYI RGATCY 1 cut(s) 1283
BsuI GTATCC 1 cut(s) 603
BsuRI GGCC 2 cut(s) 258, 501
BtgI CCRYGG 1 cut(s) 821
BtgZI GCGATG 1 cut(s) 584
BtsCI GGATG 4 cut(s) 57, 417, 530, 912
BtsIMutI CAGTG 5 cut(s) 21, 433, 640, 1093, 1241
Cac8I GCNNGC 5 cut(s) 567, 837, 1040, 1146, 1239
Cfr13I GGNCC 1 cut(s) 825
Csp6I GTAC 1 cut(s) 1162
CviQI GTAC 1 cut(s) 1162
DdeI CTNAG 4 cut(s) 450, 597, 675, 1016
DpnI GATC 1 cut(s) 1285
DpnII GATC 1 cut(s) 1283
DraI TTTAAA 1 cut(s) 312
Eam1104I CTCTTC 4 cut(s) 268, 1178, 1180, 1273
EarI CTCTTC 4 cut(s) 268, 1178, 1180, 1273
Eco130I CCWWGG 1 cut(s) 821
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 1 cut(s) 825
EcoRII CCWGG 1 cut(s) 657
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 821
EcoT22I ATGCAT 1 cut(s) 1044
ErhI CCWWGG 1 cut(s) 821
FalI AAGNNNNNCTT 4 cut(s) 600, 632, 1157, 1189
FaqI GGGAC 1 cut(s) 962
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 6 cut(s) 348, 612, 801, 942, 1059, 1137
FokI GGATG 4 cut(s) 44, 424, 517, 899
Fsp4HI GCNGC 6 cut(s) 348, 612, 801, 942, 1059, 1137
FspBI CTAG 2 cut(s) 770, 1008
GluI GCNGC 6 cut(s) 348, 612, 801, 942, 1059, 1137
GsaI CCCAGC 1 cut(s) 948
GsuI CTGGAG 1 cut(s) 680
HaeIII GGCC 2 cut(s) 258, 501
HapII CCGG 1 cut(s) 828
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 4 cut(s) 231, 362, 1091, 1168
HpaII CCGG 1 cut(s) 828
HphI GGTGA 5 cut(s) 19, 22, 114, 196, 707
Hpy166II GTNNAC 2 cut(s) 30, 394
Hpy188I TCNGA 4 cut(s) 267, 451, 676, 957
Hpy188III TCNNGA 1 cut(s) 683
Hpy8I GTNNAC 2 cut(s) 30, 394
HpyAV CCTTC 5 cut(s) 481, 576, 728, 962, 1243
HpyCH4III ACNGT 6 cut(s) 34, 635, 749, 953, 1088, 1245
HpyCH4IV ACGT 1 cut(s) 1106
HpyCH4V TGCA 8 cut(s) 180, 317, 377, 458, 605, 1042, 1136, 1241
HpyF10VI GCNNNNNNNGC 4 cut(s) 255, 611, 797, 1145
HpyF3I CTNAG 4 cut(s) 450, 597, 675, 1016
HpySE526I ACGT 1 cut(s) 1106
Kzo9I GATC 1 cut(s) 1283
LguI GCTCTTC 1 cut(s) 1180
LmnI GCTCC 3 cut(s) 147, 778, 1234
Lsp1109I GCAGC 5 cut(s) 334, 598, 812, 953, 1148
LweI GCATC 2 cut(s) 467, 676
MaeI CTAG 2 cut(s) 770, 1008
MaeII ACGT 1 cut(s) 1106
MaeIII GTNAC 5 cut(s) 43, 202, 441, 629, 997
MalI GATC 1 cut(s) 1285
MbiI CCGCTC 1 cut(s) 209
MboI GATC 1 cut(s) 1283
MboII GAAGA 7 cut(s) 67, 285, 518, 676, 1165, 1197, 1290
MflI RGATCY 1 cut(s) 1283
MluCI AATT 5 cut(s) 134, 503, 843, 1229, 1316
MlyI GAGTC 1 cut(s) 1162
Mph1103I ATGCAT 1 cut(s) 1044
MroXI GAANNNNTTC 2 cut(s) 419, 522
MseI TTAA 5 cut(s) 261, 311, 974, 1083, 1178
MslI CAYNNNNRTG 3 cut(s) 35, 239, 1260
MspA1I CMGCKG 1 cut(s) 944
MspCI CTTAAG 1 cut(s) 1177
MspI CCGG 1 cut(s) 828
MspR9I CCNGG 1 cut(s) 659
MvaI CCWGG 1 cut(s) 659
MwoI GCNNNNNNNGC 4 cut(s) 255, 611, 797, 1145
NcoI CCATGG 1 cut(s) 821
NdeII GATC 1 cut(s) 1283
NmuCI GTSAC 2 cut(s) 43, 202
NsiI ATGCAT 1 cut(s) 1044
NspI RCATGY 4 cut(s) 203, 630, 1042, 1241
OliI CACNNNNGTG 1 cut(s) 35
PaeI GCATGC 2 cut(s) 1042, 1241
PciI ACATGT 1 cut(s) 199
PciSI GCTCTTC 1 cut(s) 1180
PdmI GAANNNNTTC 2 cut(s) 419, 522
PfeI GAWTC 3 cut(s) 231, 362, 1091
PkrI GCNGC 6 cut(s) 349, 613, 802, 943, 1060, 1138
PleI GAGTC 1 cut(s) 1162
PpsI GAGTC 1 cut(s) 1162
PscI ACATGT 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 657
PspFI CCCAGC 1 cut(s) 944
PspGI CCWGG 1 cut(s) 657
PspPI GGNCC 1 cut(s) 825
PsuI RGATCY 1 cut(s) 1283
PvuII CAGCTG 1 cut(s) 944
RsaI GTAC 1 cut(s) 1163
RsaNI GTAC 1 cut(s) 1162
RseI CAYNNNNRTG 3 cut(s) 35, 239, 1260
SalI GTCGAC 1 cut(s) 392
SapI GCTCTTC 1 cut(s) 1180
SaqAI TTAA 5 cut(s) 261, 311, 974, 1083, 1178
SatI GCNGC 6 cut(s) 348, 612, 801, 942, 1059, 1137
Sau3AI GATC 1 cut(s) 1283
Sau96I GGNCC 1 cut(s) 825
SchI GAGTC 1 cut(s) 1162
ScrFI CCNGG 1 cut(s) 659
SfaNI GCATC 2 cut(s) 467, 676
SinI GGWCC 1 cut(s) 825
SmiMI CAYNNNNRTG 3 cut(s) 35, 239, 1260
SmlI CTYRAG 2 cut(s) 1177, 1209
SmoI CTYRAG 2 cut(s) 1177, 1209
SphI GCATGC 2 cut(s) 1042, 1241
Sse9I AATT 5 cut(s) 134, 503, 843, 1229, 1316
SsiI CCGC 3 cut(s) 5, 207, 1058
SspMI CTAG 2 cut(s) 770, 1008
StyD4I CCNGG 1 cut(s) 657
StyI CCWWGG 1 cut(s) 821
TaaI ACNGT 6 cut(s) 34, 635, 749, 953, 1088, 1245
TaiI ACGT 1 cut(s) 1109
TaqI TCGA 2 cut(s) 238, 393
TasI AATT 5 cut(s) 134, 503, 843, 1229, 1316
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 1 cut(s) 1061
TfiI GAWTC 3 cut(s) 231, 362, 1091
Tru1I TTAA 5 cut(s) 261, 311, 974, 1083, 1178
Tru9I TTAA 5 cut(s) 261, 311, 974, 1083, 1178
TscAI CASTG 5 cut(s) 21, 433, 640, 1093, 1248
TseFI GTSAC 2 cut(s) 43, 202
TseI GCWGC 5 cut(s) 347, 611, 800, 941, 1136
Tsp45I GTSAC 2 cut(s) 43, 202
TspDTI ATGAA 7 cut(s) 223, 375, 391, 412, 428, 883, 1083
TspGWI ACGGA 1 cut(s) 424
TspRI CASTG 5 cut(s) 21, 433, 640, 1093, 1248
Vha464I CTTAAG 1 cut(s) 1177
VpaK11BI GGWCC 1 cut(s) 825
XapI RAATTY 1 cut(s) 843
XceI RCATGY 4 cut(s) 203, 630, 1042, 1241
XmiI GTMKAC 1 cut(s) 393
XmnI GAANNNNTTC 2 cut(s) 419, 522
XspI CTAG 2 cut(s) 770, 1008
Zsp2I ATGCAT 1 cut(s) 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.