Rorug02G0390400

NAD(P)H-binding

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
49919023 .. 49923571
4549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0390400.1

Sequence Viewer

Length: 1386 bp
ATGACAATGGCGGCTTTGAATATCCTATATCAGCCATGGCCACCTACACCATCCTCTCTCTCTTTTTCCAATAATAATATTTCTTTTTTAACCCAATGTAATGCTGCTACTGCTACTATTAATAGTAAATTACTTTCTTTGTCTCATTCTTATCACTTCTCTGTTCTCTCTTCACTCCATGGAACAAACAGACCAAACTCATCATCCAAGCTCTCTTCAGTGCCAACCCACCTCTCAAAGTCTGGGACTCTTACTGCAGGCACTGGATGTTCCTGGATGCAAGACAATTCCATGCATCACAACGGTGCTGCTGACAGTGAATGTGGTGAGGGTCCATTGCATTCCGCGTTTCCAGCAAAGGCTGCTGAGATTTCATCTATTGAGGACCTTTATGAGTTTATAAGTTCAGGTCCATTGATGAACAACCTGGGTTTAGCCCCAGAAGCTGTGGCTGAGTCCATTGACAAGTGGTTGGCATATGGTTTACACCTGTGTCGGCTATTTCAGCTCAATGAATTGGACCTCTCAGTTCCTCAGAAAGTTAGGATATATCACTATTATCTTCCGGTCTTTTTTTGGTGTGAAGATCAGATATCTCAGCACAGATCCTTTTACAAAGATGGAGAAGATATACCTCCTCTAGTGATTGGGTTTAGTGCACCACAAGGTTGTGGAAAGACTACACTTGTCTTTGCTCTTGATTATCTTTTCAAAGTAACTGGCAGGAAGTCTGCCACAATATCCATTGATGACTTTTATTTGACAGCTGAGAATCAGGCTAAACTAAGAGAAGCACATCCAGGAAATGCACTTTTAGAGTTACGTGGAAATGCTGGCAGCCATGATCTTCCGTTCTCTGTGGAGACACTGACTGCTCTAAGCAATTTGAGTAAAGAAGGTATGAAGATGAAGCTACCCCGATATGACAAGTCTGCTTACAATGGAAAGGGGGACAGAGCTGATCCTTCGACATGGCCCGAGGTGGAAGGGCCGCTTACTGCTGTTCTATTTGAAGGTTGGATGCTTGGCTTCAAACCCGTTCCTGTGGAAGTTGTCAAAGCAGTCGATCCACAGCTAGAGACAGTAAATAAAAATCTTGAAGCTTATTATGATGCATGGGACAAGTTTGTCAAAGCATGGATAGTCATCAAAATCAAAGATCCCAGCTGTGTCTACCAGTGGCGTCTGCAGGCAGAGATTGCCATGAGAGAGGCAGGAAACCCTGGAATGTCCGATGATGAGGTAAAGGATTTTGTTTCACGGTACTTGCCAGCATACAATGCTTACCTTCCTACCCTCTATGCCGAAGGACCAAAAGGGTCAGATCCAAAGCACCTCATCTTCGTAGAAATTGATGAGGGAAGGAATCCCATCCTTGGTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

461

Amino Acids

50.97

Weight (kDa)

5.56

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 401
AasI GACNNNNNNGTC 1 cut(s) 1127
AccI GTMKAC 1 cut(s) 1173
AccII CGCG 1 cut(s) 347
AciI CCGC 3 cut(s) 11, 345, 992
AclWI GGATC 5 cut(s) 600, 956, 1061, 1154, 1319
AcoI YGGCCR 1 cut(s) 38
AcuI CTGAAG 1 cut(s) 201
AcyI GRCGYC 1 cut(s) 1183
AfaI GTAC 1 cut(s) 1265
AfiI CCNNNNNNNGG 1 cut(s) 1376
AgsI TTSAA 5 cut(s) 19, 712, 1013, 1033, 1100
AjnI CCWGG 4 cut(s) 272, 426, 799, 1222
AleI CACNNNNGTG 1 cut(s) 303
AluBI AGCT 9 cut(s) 211, 446, 508, 767, 913, 959, 1075, 1103, 1167
AluI AGCT 9 cut(s) 211, 446, 508, 767, 913, 959, 1075, 1103, 1167
Alw21I GWGCWC 1 cut(s) 661
Alw26I GTCTC 3 cut(s) 147, 857, 1073
Alw44I GTGCAC 1 cut(s) 657
AlwI GGATC 5 cut(s) 600, 956, 1061, 1154, 1319
AlwNI CAGNNNCTG 2 cut(s) 263, 446
Ama87I CYCGRG 1 cut(s) 977
AoxI GGCC 3 cut(s) 38, 974, 989
ApaLI GTGCAC 1 cut(s) 657
ApeKI GCWGC 4 cut(s) 104, 308, 362, 837
AseI ATTAAT 1 cut(s) 120
AspS9I GGNCC 7 cut(s) 332, 385, 410, 520, 975, 989, 1310
AsuHPI GGTGA 1 cut(s) 338
AvaI CYCGRG 1 cut(s) 977
AvaII GGWCC 5 cut(s) 332, 385, 410, 520, 1310
BaeGI GKGCMC 1 cut(s) 661
BalI TGGCCA 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 661
BbvI GCAGC 4 cut(s) 91, 295, 349, 849
BccI CCATC 3 cut(s) 58, 614, 1379
BciT130I CCWGG 4 cut(s) 274, 428, 801, 1224
BcoDI GTCTC 3 cut(s) 147, 857, 1073
BfaI CTAG 3 cut(s) 641, 1076, 1384
BfmI CTRYAG 2 cut(s) 255, 1187
BisI GCNGC 6 cut(s) 12, 105, 309, 363, 838, 992
BlsI GCNGC 6 cut(s) 13, 106, 310, 364, 839, 993
Bme1390I CCNGG 4 cut(s) 274, 428, 801, 1224
Bme18I GGWCC 5 cut(s) 332, 385, 410, 520, 1310
BmeT110I CYCGRG 1 cut(s) 977
BmgT120I GGNCC 7 cut(s) 332, 385, 410, 520, 975, 989, 1310
BmiI GGNNCC 1 cut(s) 333
BmrFI CCNGG 4 cut(s) 274, 428, 801, 1224
BmsI GCATC 4 cut(s) 267, 304, 1011, 1102
BsaAI YACGTR 1 cut(s) 824
BsaBI GATNNNNATC 1 cut(s) 1145
BsaHI GRCGYC 1 cut(s) 1183
BsaJI CCNNGG 6 cut(s) 35, 178, 427, 978, 1222, 1375
BsaWI WCCGGW 1 cut(s) 565
Bsc4I CCNNNNNNNGG 1 cut(s) 1376
Bse1I ACTGG 3 cut(s) 268, 724, 1177
Bse3DI GCAATG 1 cut(s) 335
Bse8I GATNNNNATC 1 cut(s) 1145
BseBI CCWGG 4 cut(s) 274, 428, 801, 1224
BseDI CCNNGG 6 cut(s) 35, 178, 427, 978, 1222, 1375
BseGI GGATG 7 cut(s) 50, 203, 272, 282, 796, 1026, 1371
BseJI GATNNNNATC 1 cut(s) 1145
BseLI CCNNNNNNNGG 1 cut(s) 1376
BseMI GCAATG 1 cut(s) 335
BseMII CTCAG 6 cut(s) 357, 444, 540, 548, 611, 759
BseNI ACTGG 3 cut(s) 268, 724, 1177
BseRI GAGGAG 1 cut(s) 627
BseSI GKGCMC 1 cut(s) 661
BseXI GCAGC 4 cut(s) 91, 295, 349, 849
BseYI CCCAGC 1 cut(s) 1163
Bsh1236I CGCG 1 cut(s) 347
BshFI GGCC 3 cut(s) 40, 976, 991
BsiHKAI GWGCWC 1 cut(s) 661
BsiHKCI CYCGRG 1 cut(s) 977
BsiSI CCGG 1 cut(s) 566
BslFI GGGAC 3 cut(s) 259, 965, 1133
BslI CCNNNNNNNGG 1 cut(s) 1376
BsmAI GTCTC 3 cut(s) 147, 857, 1073
BsmFI GGGAC 3 cut(s) 259, 965, 1133
BsmI GAATGC 1 cut(s) 340
BsnI GGCC 3 cut(s) 40, 976, 991
BsoBI CYCGRG 1 cut(s) 977
Bsp1286I GDGCHC 1 cut(s) 661
Bsp143I GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
Bsp19I CCATGG 2 cut(s) 35, 178
BspACI CCGC 3 cut(s) 11, 345, 992
BspANI GGCC 3 cut(s) 40, 976, 991
BspCNI CTCAG 6 cut(s) 358, 445, 539, 547, 610, 760
BspFNI CGCG 1 cut(s) 347
BspLI GGNNCC 1 cut(s) 333
BspMAI CTGCAG 2 cut(s) 259, 1191
BspPI GGATC 5 cut(s) 600, 956, 1061, 1154, 1319
BsrDI GCAATG 1 cut(s) 335
BsrI ACTGG 3 cut(s) 268, 724, 1177
BssECI CCNNGG 6 cut(s) 35, 178, 427, 978, 1222, 1375
BssMI GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
BssNI GRCGYC 1 cut(s) 1183
BssT1I CCWWGG 3 cut(s) 35, 178, 1375
Bst2UI CCWGG 4 cut(s) 274, 428, 801, 1224
Bst4CI ACNGT 4 cut(s) 305, 317, 1084, 1263
Bst6I CTCTTC 2 cut(s) 175, 220
BstACI GRCGYC 1 cut(s) 1183
BstAPI GCANNNNNTGC 3 cut(s) 362, 1199, 1280
BstBAI YACGTR 1 cut(s) 824
BstC8I GCNNGC 4 cut(s) 259, 835, 1191, 1272
BstDEI CTNAG 8 cut(s) 366, 453, 526, 534, 597, 768, 785, 878
BstDSI CCRYGG 2 cut(s) 35, 178
BstF5I GGATG 7 cut(s) 50, 203, 272, 282, 796, 1026, 1371
BstFNI CGCG 1 cut(s) 347
BstKTI GATC 7 cut(s) 589, 608, 847, 964, 1069, 1162, 1327
BstMAI GTCTC 3 cut(s) 147, 857, 1073
BstMBI GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
BstMWI GCNNNNNNNGC 7 cut(s) 110, 353, 362, 443, 505, 1199, 1280
BstNI CCWGG 4 cut(s) 274, 428, 801, 1224
BstSCI CCNGG 4 cut(s) 272, 426, 799, 1222
BstSFI CTRYAG 2 cut(s) 255, 1187
BstSLI GKGCMC 1 cut(s) 661
BstUI CGCG 1 cut(s) 347
BstV1I GCAGC 4 cut(s) 91, 295, 349, 849
BstX2I RGATCY 3 cut(s) 605, 1159, 1324
BstYI RGATCY 3 cut(s) 605, 1159, 1324
BsuRI GGCC 3 cut(s) 40, 976, 991
BtgI CCRYGG 2 cut(s) 35, 178
BtsCI GGATG 7 cut(s) 50, 203, 272, 282, 796, 1026, 1371
BtsIMutI CAGTG 5 cut(s) 225, 261, 322, 866, 1184
Cac8I GCNNGC 4 cut(s) 259, 835, 1191, 1272
CaiI CAGNNNCTG 2 cut(s) 263, 446
Cfr13I GGNCC 7 cut(s) 332, 385, 410, 520, 975, 989, 1310
CseI GACGC 1 cut(s) 1172
Csp6I GTAC 1 cut(s) 1264
CviAII CATG 8 cut(s) 36, 179, 292, 842, 972, 1116, 1137, 1204
CviQI GTAC 1 cut(s) 1264
DdeI CTNAG 8 cut(s) 366, 453, 526, 534, 597, 768, 785, 878
DpnI GATC 7 cut(s) 588, 607, 846, 963, 1068, 1161, 1326
DpnII GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
DrdI GACNNNNNNGTC 1 cut(s) 1127
DseDI GACNNNNNNGTC 1 cut(s) 1127
EaeI YGGCCR 1 cut(s) 38
Eam1104I CTCTTC 2 cut(s) 175, 220
EarI CTCTTC 2 cut(s) 175, 220
Eco130I CCWWGG 3 cut(s) 35, 178, 1375
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 5 cut(s) 332, 385, 410, 520, 1310
Eco57I CTGAAG 1 cut(s) 201
Eco88I CYCGRG 1 cut(s) 977
EcoO109I RGGNCCY 1 cut(s) 385
EcoRII CCWGG 4 cut(s) 272, 426, 799, 1222
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 3 cut(s) 35, 178, 1375
EcoT22I ATGCAT 2 cut(s) 297, 1117
ErhI CCWWGG 3 cut(s) 35, 178, 1375
FaeI CATG 8 cut(s) 39, 182, 295, 845, 975, 1119, 1140, 1207
FalI AAGNNNNNCTT 2 cut(s) 978, 1010
FaqI GGGAC 3 cut(s) 259, 965, 1133
FatI CATG 8 cut(s) 35, 178, 291, 841, 971, 1115, 1136, 1203
FauNDI CATATG 1 cut(s) 478
FblI GTMKAC 1 cut(s) 1173
Fnu4HI GCNGC 6 cut(s) 12, 105, 309, 363, 838, 992
FokI GGATG 7 cut(s) 37, 190, 279, 289, 783, 1033, 1358
Fsp4HI GCNGC 6 cut(s) 12, 105, 309, 363, 838, 992
FspBI CTAG 3 cut(s) 641, 1076, 1384
GluI GCNGC 6 cut(s) 12, 105, 309, 363, 838, 992
GsaI CCCAGC 1 cut(s) 1167
HaeIII GGCC 3 cut(s) 40, 976, 991
HapII CCGG 1 cut(s) 566
HgaI GACGC 1 cut(s) 1172
Hin1I GRCGYC 1 cut(s) 1183
Hin1II CATG 8 cut(s) 39, 182, 295, 845, 975, 1119, 1140, 1207
HindIII AAGCTT 1 cut(s) 1101
HinfI GANTC 4 cut(s) 247, 455, 772, 1366
HpaII CCGG 1 cut(s) 566
HphI GGTGA 1 cut(s) 338
Hpy166II GTNNAC 3 cut(s) 485, 659, 1174
Hpy188I TCNGA 4 cut(s) 537, 591, 1234, 1324
Hpy188III TCNNGA 2 cut(s) 698, 1097
Hpy8I GTNNAC 3 cut(s) 485, 659, 1174
HpyAV CCTTC 7 cut(s) 890, 975, 980, 1007, 1298, 1301, 1356
HpyCH4III ACNGT 4 cut(s) 305, 317, 1084, 1263
HpyCH4IV ACGT 1 cut(s) 823
HpyCH4V TGCA 8 cut(s) 257, 280, 295, 340, 659, 809, 1115, 1189
HpyF10VI GCNNNNNNNGC 7 cut(s) 110, 353, 362, 443, 505, 1199, 1280
HpyF3I CTNAG 8 cut(s) 366, 453, 526, 534, 597, 768, 785, 878
HpySE526I ACGT 1 cut(s) 823
Hsp92I GRCGYC 1 cut(s) 1183
Hsp92II CATG 8 cut(s) 39, 182, 295, 845, 975, 1119, 1140, 1207
Kzo9I GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
Lsp1109I GCAGC 4 cut(s) 91, 295, 349, 849
LweI GCATC 4 cut(s) 267, 304, 1011, 1102
MaeI CTAG 3 cut(s) 641, 1076, 1384
MaeII ACGT 1 cut(s) 823
MaeIII GTNAC 3 cut(s) 715, 819, 1379
MalI GATC 7 cut(s) 588, 607, 846, 963, 1068, 1161, 1326
MboI GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
MboII GAAGA 8 cut(s) 162, 207, 554, 596, 638, 839, 916, 1333
MflI RGATCY 3 cut(s) 605, 1159, 1324
MhlI GDGCHC 1 cut(s) 661
MlsI TGGCCA 1 cut(s) 40
MluCI AATT 5 cut(s) 128, 286, 515, 883, 1350
MluNI TGGCCA 1 cut(s) 40
MlyI GAGTC 2 cut(s) 241, 464
MmeI TCCRAC 1 cut(s) 998
Mox20I TGGCCA 1 cut(s) 40
Mph1103I ATGCAT 2 cut(s) 297, 1117
MscI TGGCCA 1 cut(s) 40
MseI TTAA 2 cut(s) 89, 120
MslI CAYNNNNRTG 1 cut(s) 303
Msp20I TGGCCA 1 cut(s) 40
MspA1I CMGCKG 2 cut(s) 767, 1167
MspI CCGG 1 cut(s) 566
MspR9I CCNGG 4 cut(s) 274, 428, 801, 1224
Mva1269I GAATGC 1 cut(s) 340
MvaI CCWGG 4 cut(s) 274, 428, 801, 1224
MvnI CGCG 1 cut(s) 347
MwoI GCNNNNNNNGC 7 cut(s) 110, 353, 362, 443, 505, 1199, 1280
NcoI CCATGG 2 cut(s) 35, 178
NdeI CATATG 1 cut(s) 478
NdeII GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
NlaIII CATG 8 cut(s) 39, 182, 295, 845, 975, 1119, 1140, 1207
NlaIV GGNNCC 1 cut(s) 333
NsiI ATGCAT 2 cut(s) 297, 1117
OliI CACNNNNGTG 1 cut(s) 303
PctI GAATGC 1 cut(s) 340
PfeI GAWTC 2 cut(s) 772, 1366
PfoI TCCNGGA 2 cut(s) 272, 799
PkrI GCNGC 6 cut(s) 13, 106, 310, 364, 839, 993
PleI GAGTC 2 cut(s) 241, 463
PpsI GAGTC 2 cut(s) 241, 463
Ppu21I YACGTR 1 cut(s) 824
PpuMI RGGWCCY 1 cut(s) 385
PshBI ATTAAT 1 cut(s) 120
PsiI TTATAA 1 cut(s) 401
Psp5II RGGWCCY 1 cut(s) 385
Psp6I CCWGG 4 cut(s) 272, 426, 799, 1222
PspFI CCCAGC 1 cut(s) 1163
PspGI CCWGG 4 cut(s) 272, 426, 799, 1222
PspN4I GGNNCC 1 cut(s) 333
PspPI GGNCC 7 cut(s) 332, 385, 410, 520, 975, 989, 1310
PspPPI RGGWCCY 1 cut(s) 385
PstI CTGCAG 2 cut(s) 259, 1191
PstNI CAGNNNCTG 2 cut(s) 263, 446
PsuI RGATCY 3 cut(s) 605, 1159, 1324
PvuII CAGCTG 2 cut(s) 767, 1167
RsaI GTAC 1 cut(s) 1265
RsaNI GTAC 1 cut(s) 1264
RseI CAYNNNNRTG 1 cut(s) 303
SaqAI TTAA 2 cut(s) 89, 120
SatI GCNGC 6 cut(s) 12, 105, 309, 363, 838, 992
Sau3AI GATC 7 cut(s) 586, 605, 844, 961, 1066, 1159, 1324
Sau96I GGNCC 7 cut(s) 332, 385, 410, 520, 975, 989, 1310
SchI GAGTC 2 cut(s) 241, 464
ScrFI CCNGG 4 cut(s) 274, 428, 801, 1224
SduI GDGCHC 1 cut(s) 661
SfaNI GCATC 4 cut(s) 267, 304, 1011, 1102
SfcI CTRYAG 2 cut(s) 255, 1187
SinI GGWCC 5 cut(s) 332, 385, 410, 520, 1310
SmiMI CAYNNNNRTG 1 cut(s) 303
Sse9I AATT 5 cut(s) 128, 286, 515, 883, 1350
SsiI CCGC 3 cut(s) 11, 345, 992
SspI AATATT 1 cut(s) 79
SspMI CTAG 3 cut(s) 641, 1076, 1384
StyD4I CCNGG 4 cut(s) 272, 426, 799, 1222
StyI CCWWGG 3 cut(s) 35, 178, 1375
TaaI ACNGT 4 cut(s) 305, 317, 1084, 1263
TaiI ACGT 1 cut(s) 826
TaqI TCGA 2 cut(s) 968, 1065
TasI AATT 5 cut(s) 128, 286, 515, 883, 1350
TauI GCSGC 2 cut(s) 14, 994
TfiI GAWTC 2 cut(s) 772, 1366
Tru1I TTAA 2 cut(s) 89, 120
Tru9I TTAA 2 cut(s) 89, 120
TscAI CASTG 5 cut(s) 225, 268, 322, 873, 1184
TseI GCWGC 4 cut(s) 104, 308, 362, 837
TspDTI ATGAA 5 cut(s) 363, 434, 528, 917, 923
TspGWI ACGGA 1 cut(s) 840
TspRI CASTG 5 cut(s) 225, 268, 322, 873, 1184
VneI GTGCAC 1 cut(s) 657
VpaK11BI GGWCC 5 cut(s) 332, 385, 410, 520, 1310
VspI ATTAAT 1 cut(s) 120
XmiI GTMKAC 1 cut(s) 1173
XspI CTAG 3 cut(s) 641, 1076, 1384
Zsp2I ATGCAT 2 cut(s) 297, 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.