NAD(P)H-binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72640 AT1G72640 AT1G72640 AT1G72640 |
| fragaria_vesca | FvH4_6g34590 |
| malus_domestica | MD09G1184500.v1.1 |
| prunus_persica | Prupe.3G042700_v2.0.a1 Prupe.3G042700_v2.0.a1 Prupe.3G042700_v2.0.a1 |
| pyrus_communis | pycom09g10220 |
| rosa_chinensis | RchiOBHm_Chr2g0145111 RchiOBHm_Chr3g0497381 RchiOBHm_Chr6g0307231 |
| rosa_laevigata | RLG00000020125 RLG00000022006 RLG00000026561 |
| rosa_multiflora | Rmu_co8227637.1_g000001 Rmu_sc0002506.1_g000025 Rmu_sc0017273.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00100870 |
| rosa_rugosa | Rorug02G0390300 Rorug02G0390400 |
| rosa_samantha | Rh2AG443100 Rh2BG454100 Rh2CG430200 Rh2DG464000 Rh4DG089500 |
| rosa_wichuraiana | Rw1G036560 Rw2G036220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 214 |
| AciI | CCGC | 2 cut(s) | 5, 368 |
| AcsI | RAATTY | 1 cut(s) | 165 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 236 |
| AgsI | TTSAA | 1 cut(s) | 472 |
| AjnI | CCWGG | 1 cut(s) | 284 |
| AluBI | AGCT | 1 cut(s) | 83 |
| AluI | AGCT | 1 cut(s) | 83 |
| Ama87I | CYCGRG | 1 cut(s) | 404 |
| AoxI | GGCC | 2 cut(s) | 118, 369 |
| ApeKI | GCWGC | 2 cut(s) | 134, 338 |
| ApoI | RAATTY | 1 cut(s) | 165 |
| AspS9I | GGNCC | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 1 cut(s) | 442 |
| AvaI | CYCGRG | 1 cut(s) | 404 |
| AvaII | GGWCC | 1 cut(s) | 188 |
| AxyI | CCTNAGG | 1 cut(s) | 231 |
| BaeGI | GKGCMC | 1 cut(s) | 217 |
| BanI | GGYRCC | 1 cut(s) | 214 |
| BbvI | GCAGC | 2 cut(s) | 121, 350 |
| BccI | CCATC | 2 cut(s) | 230, 316 |
| BciT130I | CCWGG | 1 cut(s) | 286 |
| BfmI | CTRYAG | 1 cut(s) | 336 |
| BisI | GCNGC | 3 cut(s) | 135, 339, 369 |
| BlsI | GCNGC | 3 cut(s) | 136, 340, 370 |
| Bme1390I | CCNGG | 1 cut(s) | 286 |
| Bme18I | GGWCC | 1 cut(s) | 188 |
| BmeT110I | CYCGRG | 1 cut(s) | 404 |
| BmgT120I | GGNCC | 1 cut(s) | 188 |
| BmiI | GGNNCC | 2 cut(s) | 189, 216 |
| BmrFI | CCNGG | 1 cut(s) | 286 |
| BmsI | GCATC | 3 cut(s) | 280, 355, 385 |
| BpuEI | CTTGAG | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 2 cut(s) | 285, 405 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bse21I | CCTNAGG | 1 cut(s) | 231 |
| Bse3DI | GCAATG | 1 cut(s) | 80 |
| BseBI | CCWGG | 1 cut(s) | 286 |
| BseDI | CCNNGG | 2 cut(s) | 285, 405 |
| BseGI | GGATG | 3 cut(s) | 241, 295, 370 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BseMI | GCAATG | 1 cut(s) | 80 |
| BseSI | GKGCMC | 1 cut(s) | 217 |
| BseXI | GCAGC | 2 cut(s) | 121, 350 |
| BshFI | GGCC | 2 cut(s) | 120, 371 |
| BshNI | GGYRCC | 1 cut(s) | 214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 404 |
| BslFI | GGGAC | 1 cut(s) | 386 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BsmFI | GGGAC | 1 cut(s) | 386 |
| BsnI | GGCC | 2 cut(s) | 120, 371 |
| BsoBI | CYCGRG | 1 cut(s) | 404 |
| Bsp1286I | GDGCHC | 1 cut(s) | 217 |
| BspACI | CCGC | 2 cut(s) | 5, 368 |
| BspANI | GGCC | 2 cut(s) | 120, 371 |
| BspLI | GGNNCC | 2 cut(s) | 189, 216 |
| BspMAI | CTGCAG | 1 cut(s) | 340 |
| BspT107I | GGYRCC | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 80 |
| BssECI | CCNNGG | 2 cut(s) | 285, 405 |
| Bst2UI | CCWGG | 1 cut(s) | 286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 395 |
| BstDEI | CTNAG | 3 cut(s) | 192, 231, 353 |
| BstEII | GGTNACC | 1 cut(s) | 301 |
| BstF5I | GGATG | 3 cut(s) | 241, 295, 370 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 395 |
| BstNI | CCWGG | 1 cut(s) | 286 |
| BstPI | GGTNACC | 1 cut(s) | 301 |
| BstSCI | CCNGG | 1 cut(s) | 284 |
| BstSFI | CTRYAG | 1 cut(s) | 336 |
| BstSLI | GKGCMC | 1 cut(s) | 217 |
| BstV1I | GCAGC | 2 cut(s) | 121, 350 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 116 |
| Bsu36I | CCTNAGG | 1 cut(s) | 231 |
| BsuRI | GGCC | 2 cut(s) | 120, 371 |
| BtsCI | GGATG | 3 cut(s) | 241, 295, 370 |
| Cfr13I | GGNCC | 1 cut(s) | 188 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviJI | RGCY | 3 cut(s) | 83, 120, 371 |
| CviKI_1 | RGCY | 3 cut(s) | 83, 120, 371 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 3 cut(s) | 192, 231, 353 |
| Eco47I | GGWCC | 1 cut(s) | 188 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| Eco81I | CCTNAGG | 1 cut(s) | 231 |
| Eco88I | CYCGRG | 1 cut(s) | 404 |
| Eco91I | GGTNACC | 1 cut(s) | 301 |
| EcoO109I | RGGNCCY | 1 cut(s) | 188 |
| EcoO65I | GGTNACC | 1 cut(s) | 301 |
| EcoRII | CCWGG | 1 cut(s) | 284 |
| FaiI | YATR | 2 cut(s) | 210, 419 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 336, 368 |
| FaqI | GGGAC | 1 cut(s) | 386 |
| Fnu4HI | GCNGC | 3 cut(s) | 135, 339, 369 |
| FokI | GGATG | 3 cut(s) | 248, 302, 377 |
| Fsp4HI | GCNGC | 3 cut(s) | 135, 339, 369 |
| GluI | GCNGC | 3 cut(s) | 135, 339, 369 |
| HaeIII | GGCC | 2 cut(s) | 120, 371 |
| HinfI | GANTC | 1 cut(s) | 414 |
| HphI | GGTGA | 1 cut(s) | 442 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 2 cut(s) | 271, 454 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| Hpy99I | CGWCG | 1 cut(s) | 311 |
| HpyAV | CCTTC | 1 cut(s) | 266 |
| HpyCH4V | TGCA | 3 cut(s) | 78, 338, 398 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 395 |
| HpyF3I | CTNAG | 3 cut(s) | 192, 231, 353 |
| LpnPI | CCDG | 4 cut(s) | 231, 271, 298, 314 |
| Lsp1109I | GCAGC | 2 cut(s) | 121, 350 |
| LweI | GCATC | 3 cut(s) | 280, 355, 385 |
| MaeIII | GTNAC | 1 cut(s) | 301 |
| MboII | GAAGA | 2 cut(s) | 154, 263 |
| MhlI | GDGCHC | 1 cut(s) | 217 |
| MluCI | AATT | 3 cut(s) | 55, 165, 263 |
| MnlI | CCTC | 6 cut(s) | 175, 192, 250, 355, 400, 418 |
| MseI | TTAA | 2 cut(s) | 101, 493 |
| MspR9I | CCNGG | 1 cut(s) | 286 |
| MvaI | CCWGG | 1 cut(s) | 286 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 395 |
| NlaIV | GGNNCC | 2 cut(s) | 189, 216 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 315 |
| PfeI | GAWTC | 1 cut(s) | 414 |
| PkrI | GCNGC | 3 cut(s) | 136, 340, 370 |
| PpuMI | RGGWCCY | 1 cut(s) | 188 |
| Psp5II | RGGWCCY | 1 cut(s) | 188 |
| Psp6I | CCWGG | 1 cut(s) | 284 |
| PspEI | GGTNACC | 1 cut(s) | 301 |
| PspGI | CCWGG | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 2 cut(s) | 189, 216 |
| PspPI | GGNCC | 1 cut(s) | 188 |
| PspPPI | RGGWCCY | 1 cut(s) | 188 |
| PstI | CTGCAG | 1 cut(s) | 340 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| SaqAI | TTAA | 2 cut(s) | 101, 493 |
| SatI | GCNGC | 3 cut(s) | 135, 339, 369 |
| Sau96I | GGNCC | 1 cut(s) | 188 |
| ScrFI | CCNGG | 1 cut(s) | 286 |
| SduI | GDGCHC | 1 cut(s) | 217 |
| SetI | ASST | 6 cut(s) | 85, 116, 220, 232, 429, 450 |
| SfaNI | GCATC | 3 cut(s) | 280, 355, 385 |
| SfcI | CTRYAG | 1 cut(s) | 336 |
| SinI | GGWCC | 1 cut(s) | 188 |
| SmlI | CTYRAG | 1 cut(s) | 66 |
| SmoI | CTYRAG | 1 cut(s) | 66 |
| Sse9I | AATT | 3 cut(s) | 55, 165, 263 |
| SsiI | CCGC | 2 cut(s) | 5, 368 |
| StyD4I | CCNGG | 1 cut(s) | 284 |
| TasI | AATT | 3 cut(s) | 55, 165, 263 |
| TatI | WGTACW | 1 cut(s) | 10 |
| TauI | GCSGC | 1 cut(s) | 371 |
| TfiI | GAWTC | 1 cut(s) | 414 |
| Tru1I | TTAA | 2 cut(s) | 101, 493 |
| Tru9I | TTAA | 2 cut(s) | 101, 493 |
| TseI | GCWGC | 2 cut(s) | 134, 338 |
| TspDTI | ATGAA | 3 cut(s) | 12, 294, 406 |
| TspGWI | ACGGA | 1 cut(s) | 324 |
| VpaK11BI | GGWCC | 1 cut(s) | 188 |
| XapI | RAATTY | 1 cut(s) | 165 |