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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67035 AT1G67035 AT5G38300 |
| fragaria_vesca | FvH4_6g36230 |
| malus_domestica | MD09G1253700.v1.1 MD17G1245500.v1.1 |
| prunus_persica | Prupe.3G143600_v2.0.a1 |
| pyrus_communis | pycom09g16960 pycom17g24800 |
| rosa_chinensis | RchiOBHm_Chr2g0148201 |
| rosa_laevigata | RLG00000020326 |
| rosa_multiflora | Rmu_sc0001516.1_g000105 |
| rosa_roxburghii | Rroxscaffold_2G00099000 |
| rosa_rugosa | Rorug02G0404400 |
| rosa_samantha | Rh2AG463000 Rh2BG476200 Rh2CG449800 Rh2DG484900 |
| rosa_wichuraiana | Rw2G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 746 |
| AccI | GTMKAC | 2 cut(s) | 298, 377 |
| AccII | CGCG | 2 cut(s) | 58, 1134 |
| AciI | CCGC | 1 cut(s) | 240 |
| AclWI | GGATC | 4 cut(s) | 589, 934, 1410, 1423 |
| AcsI | RAATTY | 1 cut(s) | 1373 |
| AcuI | CTGAAG | 5 cut(s) | 141, 402, 450, 681, 1089 |
| AfaI | GTAC | 2 cut(s) | 1381, 1475 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 746, 1330, 1425 |
| AflIII | ACRYGT | 1 cut(s) | 56 |
| AgsI | TTSAA | 8 cut(s) | 390, 456, 528, 602, 665, 944, 1048, 1214 |
| AjnI | CCWGG | 1 cut(s) | 849 |
| Alw21I | GWGCWC | 2 cut(s) | 366, 1041 |
| Alw26I | GTCTC | 3 cut(s) | 271, 602, 972 |
| Alw44I | GTGCAC | 1 cut(s) | 362 |
| AlwI | GGATC | 4 cut(s) | 589, 934, 1410, 1423 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 428, 1082 |
| AoxI | GGCC | 3 cut(s) | 110, 667, 1231 |
| ApaLI | GTGCAC | 1 cut(s) | 362 |
| ApeKI | GCWGC | 3 cut(s) | 141, 1076, 1448 |
| ApoI | RAATTY | 1 cut(s) | 1373 |
| AspLEI | GCGC | 2 cut(s) | 1136, 1207 |
| AspS9I | GGNCC | 2 cut(s) | 110, 1231 |
| AsuHPI | GGTGA | 3 cut(s) | 866, 1019, 1345 |
| AsuII | TTCGAA | 2 cut(s) | 147, 875 |
| BaeGI | GKGCMC | 1 cut(s) | 366 |
| BamHI | GGATCC | 1 cut(s) | 1415 |
| BbsI | GAAGAC | 1 cut(s) | 232 |
| Bbv12I | GWGCWC | 2 cut(s) | 366, 1041 |
| BbvI | GCAGC | 3 cut(s) | 128, 1088, 1460 |
| BccI | CCATC | 4 cut(s) | 212, 406, 967, 1108 |
| BciT130I | CCWGG | 1 cut(s) | 851 |
| BcoDI | GTCTC | 3 cut(s) | 271, 602, 972 |
| BfaI | CTAG | 4 cut(s) | 690, 830, 1139, 1292 |
| BfmI | CTRYAG | 1 cut(s) | 202 |
| BisI | GCNGC | 3 cut(s) | 142, 1077, 1449 |
| BlsI | GCNGC | 3 cut(s) | 143, 1078, 1450 |
| Bme1390I | CCNGG | 1 cut(s) | 851 |
| BmgT120I | GGNCC | 2 cut(s) | 110, 1231 |
| BmiI | GGNNCC | 1 cut(s) | 1417 |
| BmrFI | CCNGG | 1 cut(s) | 851 |
| BmsI | GCATC | 7 cut(s) | 470, 565, 696, 1107, 1255, 1291, 1378 |
| BpiI | GAAGAC | 1 cut(s) | 232 |
| Bpu10I | CCTNAGC | 1 cut(s) | 775 |
| Bpu14I | TTCGAA | 2 cut(s) | 147, 875 |
| BpuEI | CTTGAG | 3 cut(s) | 381, 658, 1136 |
| BsaBI | GATNNNNATC | 3 cut(s) | 626, 906, 1305 |
| BsaI | GGTCTC | 1 cut(s) | 271 |
| BsaJI | CCNNGG | 4 cut(s) | 849, 850, 1393, 1419 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 489, 519 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 746, 1330, 1425 |
| Bse1I | ACTGG | 1 cut(s) | 281 |
| Bse3DI | GCAATG | 1 cut(s) | 1231 |
| Bse8I | GATNNNNATC | 3 cut(s) | 626, 906, 1305 |
| BseBI | CCWGG | 1 cut(s) | 851 |
| BseDI | CCNNGG | 4 cut(s) | 849, 850, 1393, 1419 |
| BseGI | GGATG | 2 cut(s) | 223, 784 |
| BseJI | GATNNNNATC | 3 cut(s) | 626, 906, 1305 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 746, 1330, 1425 |
| BseMI | GCAATG | 1 cut(s) | 1231 |
| BseMII | CTCAG | 5 cut(s) | 9, 307, 339, 602, 1074 |
| BseNI | ACTGG | 1 cut(s) | 281 |
| BseRI | GAGGAG | 5 cut(s) | 68, 71, 74, 77, 510 |
| BseSI | GKGCMC | 1 cut(s) | 366 |
| BseXI | GCAGC | 3 cut(s) | 128, 1088, 1460 |
| Bsh1236I | CGCG | 2 cut(s) | 58, 1134 |
| BshFI | GGCC | 3 cut(s) | 112, 669, 1233 |
| BsiHKAI | GWGCWC | 2 cut(s) | 366, 1041 |
| BslFI | GGGAC | 1 cut(s) | 1170 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 746, 1330, 1425 |
| BsmAI | GTCTC | 3 cut(s) | 271, 602, 972 |
| BsmFI | GGGAC | 1 cut(s) | 1170 |
| BsmI | GAATGC | 2 cut(s) | 326, 523 |
| BsnI | GGCC | 3 cut(s) | 112, 669, 1233 |
| Bso31I | GGTCTC | 1 cut(s) | 271 |
| Bsp119I | TTCGAA | 2 cut(s) | 147, 875 |
| Bsp1286I | GDGCHC | 2 cut(s) | 366, 1041 |
| Bsp143I | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| BspACI | CCGC | 1 cut(s) | 240 |
| BspANI | GGCC | 3 cut(s) | 112, 669, 1233 |
| BspCNI | CTCAG | 5 cut(s) | 10, 306, 338, 601, 1075 |
| BspFNI | CGCG | 2 cut(s) | 58, 1134 |
| BspLI | GGNNCC | 1 cut(s) | 1417 |
| BspPI | GGATC | 4 cut(s) | 589, 934, 1410, 1423 |
| BspT104I | TTCGAA | 2 cut(s) | 147, 875 |
| BspTNI | GGTCTC | 1 cut(s) | 271 |
| BsrDI | GCAATG | 1 cut(s) | 1231 |
| BsrI | ACTGG | 1 cut(s) | 281 |
| BssECI | CCNNGG | 4 cut(s) | 849, 850, 1393, 1419 |
| BssMI | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| BssNAI | GTATAC | 1 cut(s) | 299 |
| Bst1107I | GTATAC | 1 cut(s) | 299 |
| Bst2UI | CCWGG | 1 cut(s) | 851 |
| Bst4CI | ACNGT | 7 cut(s) | 182, 191, 251, 505, 869, 1036, 1333 |
| Bst6I | CTCTTC | 1 cut(s) | 1108 |
| BstBI | TTCGAA | 2 cut(s) | 147, 875 |
| BstC8I | GCNNGC | 2 cut(s) | 711, 1245 |
| BstDEI | CTNAG | 9 cut(s) | 18, 104, 293, 325, 438, 588, 775, 1083, 1123 |
| BstDSI | CCRYGG | 1 cut(s) | 1393 |
| BstF5I | GGATG | 2 cut(s) | 223, 784 |
| BstFNI | CGCG | 2 cut(s) | 58, 1134 |
| BstHHI | GCGC | 2 cut(s) | 1136, 1207 |
| BstKTI | GATC | 4 cut(s) | 584, 910, 929, 1418 |
| BstMAI | GTCTC | 3 cut(s) | 271, 602, 972 |
| BstMBI | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1230 |
| BstNI | CCWGG | 1 cut(s) | 851 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| BstSCI | CCNGG | 1 cut(s) | 849 |
| BstSFI | CTRYAG | 1 cut(s) | 202 |
| BstSLI | GKGCMC | 1 cut(s) | 366 |
| BstUI | CGCG | 2 cut(s) | 58, 1134 |
| BstV1I | GCAGC | 3 cut(s) | 128, 1088, 1460 |
| BstV2I | GAAGAC | 1 cut(s) | 232 |
| BstX2I | RGATCY | 3 cut(s) | 581, 926, 1415 |
| BstYI | RGATCY | 3 cut(s) | 581, 926, 1415 |
| BstZ17I | GTATAC | 1 cut(s) | 299 |
| BsuRI | GGCC | 3 cut(s) | 112, 669, 1233 |
| BtgI | CCRYGG | 1 cut(s) | 1393 |
| BtgZI | GCGATG | 2 cut(s) | 447, 542 |
| BtsCI | GGATG | 2 cut(s) | 223, 784 |
| BtsI | GCAGTG | 1 cut(s) | 735 |
| BtsIMutI | CAGTG | 4 cut(s) | 178, 510, 735, 874 |
| Cac8I | GCNNGC | 2 cut(s) | 711, 1245 |
| CaiI | CAGNNNCTG | 2 cut(s) | 428, 1082 |
| CfoI | GCGC | 2 cut(s) | 1136, 1207 |
| Cfr13I | GGNCC | 2 cut(s) | 110, 1231 |
| Csp6I | GTAC | 2 cut(s) | 1380, 1474 |
| CviAII | CATG | 8 cut(s) | 30, 138, 214, 1042, 1073, 1325, 1349, 1445 |
| CviQI | GTAC | 2 cut(s) | 1380, 1474 |
| DdeI | CTNAG | 9 cut(s) | 18, 104, 293, 325, 438, 588, 775, 1083, 1123 |
| DpnI | GATC | 4 cut(s) | 583, 909, 928, 1417 |
| DpnII | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| Eam1104I | CTCTTC | 1 cut(s) | 1108 |
| EarI | CTCTTC | 1 cut(s) | 1108 |
| Eco147I | AGGCCT | 1 cut(s) | 669 |
| Eco31I | GGTCTC | 1 cut(s) | 271 |
| Eco57I | CTGAAG | 5 cut(s) | 141, 402, 450, 681, 1089 |
| EcoRII | CCWGG | 1 cut(s) | 849 |
| EcoT22I | ATGCAT | 1 cut(s) | 1270 |
| FaeI | CATG | 8 cut(s) | 33, 141, 217, 1045, 1076, 1328, 1352, 1448 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1269, 1301 |
| FaqI | GGGAC | 1 cut(s) | 1170 |
| FatI | CATG | 8 cut(s) | 29, 137, 213, 1041, 1072, 1324, 1348, 1444 |
| FblI | GTMKAC | 2 cut(s) | 298, 377 |
| Fnu4HI | GCNGC | 3 cut(s) | 142, 1077, 1449 |
| FokI | GGATG | 2 cut(s) | 230, 771 |
| Fsp4HI | GCNGC | 3 cut(s) | 142, 1077, 1449 |
| FspBI | CTAG | 4 cut(s) | 690, 830, 1139, 1292 |
| GlaI | GCGC | 2 cut(s) | 1135, 1206 |
| GluI | GCNGC | 3 cut(s) | 142, 1077, 1449 |
| HaeIII | GGCC | 3 cut(s) | 112, 669, 1233 |
| HhaI | GCGC | 2 cut(s) | 1136, 1207 |
| Hin1II | CATG | 8 cut(s) | 33, 141, 217, 1045, 1076, 1328, 1352, 1448 |
| Hin6I | GCGC | 2 cut(s) | 1134, 1205 |
| HinP1I | GCGC | 2 cut(s) | 1134, 1205 |
| HincII | GTYRAC | 3 cut(s) | 211, 247, 811 |
| HindII | GTYRAC | 3 cut(s) | 211, 247, 811 |
| HindIII | AAGCTT | 1 cut(s) | 803 |
| HinfI | GANTC | 7 cut(s) | 158, 650, 842, 859, 887, 1149, 1360 |
| HpaI | GTTAAC | 1 cut(s) | 211 |
| HphI | GGTGA | 3 cut(s) | 866, 1019, 1345 |
| Hpy188III | TCNNGA | 6 cut(s) | 398, 690, 788, 863, 1292, 1520 |
| HpyAV | CCTTC | 2 cut(s) | 659, 1333 |
| HpyCH4III | ACNGT | 7 cut(s) | 182, 191, 251, 505, 869, 1036, 1333 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1230 |
| HpyF3I | CTNAG | 9 cut(s) | 18, 104, 293, 325, 438, 588, 775, 1083, 1123 |
| Hsp92II | CATG | 8 cut(s) | 33, 141, 217, 1045, 1076, 1328, 1352, 1448 |
| HspAI | GCGC | 2 cut(s) | 1134, 1205 |
| KspAI | GTTAAC | 1 cut(s) | 211 |
| Kzo9I | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| LmnI | GCTCC | 1 cut(s) | 1326 |
| Lsp1109I | GCAGC | 3 cut(s) | 128, 1088, 1460 |
| LweI | GCATC | 7 cut(s) | 470, 565, 696, 1107, 1255, 1291, 1378 |
| MaeI | CTAG | 4 cut(s) | 690, 830, 1139, 1292 |
| MaeIII | GTNAC | 7 cut(s) | 13, 59, 176, 251, 337, 424, 749 |
| MalI | GATC | 4 cut(s) | 583, 909, 928, 1417 |
| MboI | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| MflI | RGATCY | 3 cut(s) | 581, 926, 1415 |
| MhlI | GDGCHC | 2 cut(s) | 366, 1041 |
| MluI | ACGCGT | 1 cut(s) | 56 |
| MlyI | GAGTC | 1 cut(s) | 1143 |
| Mph1103I | ATGCAT | 1 cut(s) | 1270 |
| MseI | TTAA | 7 cut(s) | 210, 624, 917, 948, 1011, 1275, 1316 |
| MslI | CAYNNNNRTG | 2 cut(s) | 410, 1500 |
| MspR9I | CCNGG | 1 cut(s) | 851 |
| Mva1269I | GAATGC | 2 cut(s) | 326, 523 |
| MvaI | CCWGG | 1 cut(s) | 851 |
| MvnI | CGCG | 2 cut(s) | 58, 1134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1230 |
| NdeII | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| NlaIII | CATG | 8 cut(s) | 33, 141, 217, 1045, 1076, 1328, 1352, 1448 |
| NlaIV | GGNNCC | 1 cut(s) | 1417 |
| NmeAIII | GCCGAG | 1 cut(s) | 138 |
| NmuCI | GTSAC | 2 cut(s) | 59, 176 |
| NsiI | ATGCAT | 1 cut(s) | 1270 |
| NspI | RCATGY | 1 cut(s) | 33 |
| NspV | TTCGAA | 2 cut(s) | 147, 875 |
| PasI | CCCWGGG | 1 cut(s) | 850 |
| PceI | AGGCCT | 1 cut(s) | 669 |
| PctI | GAATGC | 2 cut(s) | 326, 523 |
| PfeI | GAWTC | 6 cut(s) | 158, 650, 842, 859, 887, 1360 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 746 |
| PkrI | GCNGC | 3 cut(s) | 143, 1078, 1450 |
| PleI | GAGTC | 1 cut(s) | 1143 |
| PpsI | GAGTC | 1 cut(s) | 1143 |
| Psp6I | CCWGG | 1 cut(s) | 849 |
| PspGI | CCWGG | 1 cut(s) | 849 |
| PspN4I | GGNNCC | 1 cut(s) | 1417 |
| PspPI | GGNCC | 2 cut(s) | 110, 1231 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1159, 1191 |
| PstNI | CAGNNNCTG | 2 cut(s) | 428, 1082 |
| PsuI | RGATCY | 3 cut(s) | 581, 926, 1415 |
| RsaI | GTAC | 2 cut(s) | 1381, 1475 |
| RsaNI | GTAC | 2 cut(s) | 1380, 1474 |
| RseI | CAYNNNNRTG | 2 cut(s) | 410, 1500 |
| SaqAI | TTAA | 7 cut(s) | 210, 624, 917, 948, 1011, 1275, 1316 |
| SatI | GCNGC | 3 cut(s) | 142, 1077, 1449 |
| Sau3AI | GATC | 4 cut(s) | 581, 907, 926, 1415 |
| Sau96I | GGNCC | 2 cut(s) | 110, 1231 |
| SchI | GAGTC | 1 cut(s) | 1143 |
| ScrFI | CCNGG | 1 cut(s) | 851 |
| SduI | GDGCHC | 2 cut(s) | 366, 1041 |
| SfaNI | GCATC | 7 cut(s) | 470, 565, 696, 1107, 1255, 1291, 1378 |
| SfcI | CTRYAG | 1 cut(s) | 202 |
| SfuI | TTCGAA | 2 cut(s) | 147, 875 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 410, 1500 |
| SmlI | CTYRAG | 3 cut(s) | 396, 673, 1151 |
| SmoI | CTYRAG | 3 cut(s) | 396, 673, 1151 |
| SseBI | AGGCCT | 1 cut(s) | 669 |
| SsiI | CCGC | 1 cut(s) | 240 |
| SspMI | CTAG | 4 cut(s) | 690, 830, 1139, 1292 |
| StuI | AGGCCT | 1 cut(s) | 669 |
| StyD4I | CCNGG | 1 cut(s) | 849 |
| TaaI | ACNGT | 7 cut(s) | 182, 191, 251, 505, 869, 1036, 1333 |
| TaqI | TCGA | 2 cut(s) | 147, 875 |
| TaqII | GACCGA | 1 cut(s) | 530 |
| TfiI | GAWTC | 6 cut(s) | 158, 650, 842, 859, 887, 1360 |
| Tru1I | TTAA | 7 cut(s) | 210, 624, 917, 948, 1011, 1275, 1316 |
| Tru9I | TTAA | 7 cut(s) | 210, 624, 917, 948, 1011, 1275, 1316 |
| TscAI | CASTG | 4 cut(s) | 185, 510, 735, 874 |
| TseFI | GTSAC | 2 cut(s) | 59, 176 |
| TseI | GCWGC | 3 cut(s) | 141, 1076, 1448 |
| Tsp45I | GTSAC | 2 cut(s) | 59, 176 |
| TspDTI | ATGAA | 8 cut(s) | 330, 489, 751, 894, 912, 918, 1061, 1352 |
| TspGWI | ACGGA | 1 cut(s) | 356 |
| TspRI | CASTG | 4 cut(s) | 185, 510, 735, 874 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 746 |
| VneI | GTGCAC | 1 cut(s) | 362 |
| XapI | RAATTY | 1 cut(s) | 1373 |
| XbaI | TCTAGA | 2 cut(s) | 689, 1291 |
| XceI | RCATGY | 1 cut(s) | 33 |
| XmiI | GTMKAC | 2 cut(s) | 298, 377 |
| XspI | CTAG | 4 cut(s) | 690, 830, 1139, 1292 |
| Zsp2I | ATGCAT | 1 cut(s) | 1270 |