Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005855

Physical Location & Seq

Genomic Coordinates Forward (+)

61102766 .. 61107705

Gene Structure 4940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0480400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGAAGAAGAAAGCGAGGGACTTTTTCAGAAGAAGCATCAGCACCTTCTTCACCCGCCTCAAAATAACAATGGAGACTTCACACCAACAGCAGCAACGTTACAGTTACAACCCAACTCTGCGTTGGAATCCCGAGGTCGAATCCTACTTGTCCAACGCTTATGGACCCGCCCATTTCTCTCGCATCTCCAAAGCCCTAACGCGGCCGTCTTGTTATTCTTGTATAAGAGTGAACACATTGAAGTCCACACCAGACTCCGTTATCGAGAAGTTGAGAGGGATTCTGAAAGGGGTTTCAATTTCCAAATGTGAAGTTCCAGGTTTGGAGTACTTGGTGTTTGTCAAGGGCTCAGGTCCTCACTCAGTTGATTACGGGTGTGATGAAGATGGGAATGTGAAGCATCCTCCTAAGGAGGTGCTTGTGAGCCGGAAATGTGCCGAGGCGGTTCTTCGTGGCGCCGAGGTGTATGTTCCTGGTGTACTGGCTTGCAGTGCTCATGTTGAGAAGGGGGATGAGGTTGCGGTTTCGGTGTCGGTTGAGCAGCCCGGTGCTGAGGGTGGATGGGTGGTTGGGATCACTAGAGGGACTATTCTGCAAGGTGCTGAGACAGATCCTTATCATTTTGAAAGGAGCGGGCTGTATATTGGCCGAGGTAAAGCAATGATGACAAGGTCTGGGATTTTTCGTGCTCCTGAAGGAATTGCTGTGGATTTCAGTGACAGAGTATATGATCTGCCTTCGTTTCGTGGCGTGCTTGAGGGGGAAATATTTCTTCAAAATCTGCCAAGCATTGTCACTGCTCATGCTCTAGATCCTCAAAAAGGTGAGCGCATACTAGACATGTGTGCTGCACCTGGAGGGAAAACAACTGCAATTGCAATTCTTATGAAGGATGAAGGGGAAATTGTTGCCGCTGATAGATCTCACAATAAGGTACTGGATATTCAGAAATTGGCTGCTGAAATGGGCCTTAGTTGTATTACCACTTGCAGACTTGATGCTCTGAAAGCTGTTTGTAGTCGTAATGAATCTGATAATATAACTAATCATTGCTGCACTGAGGATAGCTGTGATGTAACAATTCAAGGTTCCAACTTGTTGAAGTCAGAAGTAGAGAAAATTGAAGTGATTGCCACAGAAAGGTTGAATGCCGAAAAGGATTTTAAGAAAAATGCGAATGAGAGAATTTACATTAGCAGAGCTGACATCAGGAAGGATATGCGAAGGAAACGGAATGGTCCAGGAAGAAATCAGTCTGTGGGTGGTAAGGCTGAGAAGTCAAAAGGCTTTGCTCCCAACAGCTTTGATCGGGTTCTTCTAGATGCTCCCTGCTCTGCTCTTGGTTTAAGACCTCGACTATTTGCTGGAGAGGAAACAGTCGAATCCTTGAGAAAACATGCAAAGTATCAAAGGAAAATGTTTGATCAGGCTGTTCAGCTAGTTCGTCCAGGTGGAGTTCTTGTGTATTCAACATGTACAATAAATCCTGGAGAGAATGAAGCTGTGGTTCGATATGCTTTGGATACCTACAAATTCCTATCCTTGGCATCACAGAACCCCAGAATTGGAGGACCTGGTCTAGTTGGCCGTTTTGAATTCCCTGATGGATATACTGAGGAGTGGCTAAGACCTGGTCAGGAAGAACTCGTACAGAGGTTCGATCCATCGTCTCCGCTCGATACGATCGGGTTTTTCATAGCCAAGTTTATAGTTGGATCAAAAGAGGCTGACTTGGAACAATCCGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET zf-MYND

Protein Analysis

583

Amino Acids

64.37

Weight (kDa)

8.37

Isoelectric Point (pI)

39.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA	PF01472	138 - 175	3.9e-06	PUA domain
Methyltr_RsmB-F	PF01189	268 - 337	7.9e-16	16S rRNA methyltransferase RsmB/F
Methyltr_RsmB-F	PF01189	429 - 515	3.5e-19	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21820
fragaria_vesca	FvH4_6g43540 FvH4_6g43540 FvH4_6g43540 FvH4_6g43540 FvH4_6g43540 FvH4_6g43540 FvH4_6g43540 FvH4_6g43540
malus_domestica	MD09G1105100.v1.1
prunus_persica	Prupe.3G220400_v2.0.a1
pyrus_communis	pycom09g02820
rosa_chinensis	RchiOBHm_Chr2g0160071
rosa_laevigata	RLG00000021195
rosa_multiflora	Rmu_sc0002023.1_g000014
rosa_roxburghii	Rroxscaffold_2G00090050
rosa_rugosa	Rorug02G0480300 Rorug02G0480400 Rorug02G0480400 Rorug02G0480500 Rorug02G0480600 Rorug02G0480700 Rorug02G0480800
rosa_samantha	Rh2AG546700 Rh2BG560100 Rh2CG530100 Rh2DG568800
rosa_wichuraiana	Rw2G045210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	455
AccBSI	CCGCTC	2 cut(s)	633, 1675
AccII	CGCG	1 cut(s)	202
AciI	CCGC	9 cut(s)	55, 168, 202, 443, 521, 633, 912, 1673, 1743
AclI	AACGTT	1 cut(s)	97
AclWI	GGATC	5 cut(s)	581, 605, 806, 1655, 1723
AcoI	YGGCCR	3 cut(s)	203, 646, 1585
AcsI	RAATTY	3 cut(s)	1185, 1532, 1595
AcuI	CTGAAG	1 cut(s)	714
AcyI	GRCGYC	1 cut(s)	456
AfaI	GTAC	5 cut(s)	329, 480, 936, 1477, 1650
AfiI	CCNNNNNNNGG	5 cut(s)	201, 821, 1140, 1543, 1565
AflIII	ACRYGT	2 cut(s)	840, 1472
AjnI	CCWGG	8 cut(s)	316, 472, 853, 1240, 1447, 1486, 1573, 1630
AluBI	AGCT	6 cut(s)	1010, 1068, 1202, 1302, 1438, 1502
AluI	AGCT	6 cut(s)	1010, 1068, 1202, 1302, 1438, 1502
Alw21I	GWGCWC	2 cut(s)	496, 691
Alw26I	GTCTC	3 cut(s)	68, 599, 1674
AlwI	GGATC	5 cut(s)	581, 605, 806, 1655, 1723
Ama87I	CYCGRG	1 cut(s)	131
AoxI	GGCC	4 cut(s)	203, 646, 967, 1585
ApeKI	GCWGC	5 cut(s)	91, 541, 848, 956, 1053
ApoI	RAATTY	3 cut(s)	1185, 1532, 1595
Asp700I	GAANNNNTTC	1 cut(s)	768
AspLEI	GCGC	2 cut(s)	458, 831
AspS9I	GGNCC	5 cut(s)	164, 353, 967, 1238, 1571
AsuC2I	CCSGG	1 cut(s)	546
AsuHPI	GGTGA	2 cut(s)	43, 836
AvaI	CYCGRG	1 cut(s)	131
AvaII	GGWCC	4 cut(s)	164, 353, 1238, 1571
AxyI	CCTNAGG	1 cut(s)	408
BanI	GGYRCC	1 cut(s)	455
BanII	GRGCYC	1 cut(s)	350
BarI	GAAGNNNNNNTAC	2 cut(s)	1632, 1664
Bbv12I	GWGCWC	2 cut(s)	496, 691
BbvCI	CCTCAGC	1 cut(s)	552
BbvI	GCAGC	5 cut(s)	103, 553, 835, 943, 1040
BccI	CCATC	4 cut(s)	380, 555, 1598, 1672
BceAI	ACGGC	2 cut(s)	190, 1572
BciT130I	CCWGG	8 cut(s)	318, 474, 855, 1242, 1449, 1488, 1575, 1632
BciVI	GTATCC	1 cut(s)	1516
BclI	TGATCA	1 cut(s)	1423
BcnI	CCSGG	1 cut(s)	546
BcoDI	GTCTC	3 cut(s)	68, 599, 1674
BfaI	CTAG	6 cut(s)	579, 809, 836, 1319, 1439, 1580
BfoI	RGCGCY	1 cut(s)	459
BfuI	GTATCC	1 cut(s)	1516
BglII	AGATCT	1 cut(s)	920
BisI	GCNGC	7 cut(s)	92, 203, 542, 849, 912, 957, 1054
BlsI	GCNGC	7 cut(s)	93, 204, 543, 850, 913, 958, 1055
BmcAI	AGTACT	1 cut(s)	329
Bme1390I	CCNGG	9 cut(s)	318, 474, 546, 855, 1242, 1449, 1488, 1575, 1632
Bme18I	GGWCC	4 cut(s)	164, 353, 1238, 1571
BmeT110I	CYCGRG	1 cut(s)	131
BmgT120I	GGNCC	5 cut(s)	164, 353, 967, 1238, 1571
BmiI	GGNNCC	3 cut(s)	166, 457, 1090
BmrFI	CCNGG	9 cut(s)	318, 474, 546, 855, 1242, 1449, 1488, 1575, 1632
BmsI	GCATC	6 cut(s)	45, 192, 409, 988, 1312, 1556
BpmI	CTGGAG	3 cut(s)	876, 1386, 1509
Bpu10I	CCTNAGC	2 cut(s)	349, 552
BpuEI	CTTGAG	2 cut(s)	776, 1408
BpuMI	CCSGG	1 cut(s)	546
BsaBI	GATNNNNATC	1 cut(s)	615
BsaHI	GRCGYC	1 cut(s)	456
BsaJI	CCNNGG	5 cut(s)	132, 438, 459, 649, 1542
BsaXI	ACNNNNNCTCC	2 cut(s)	1446, 1476
Bsc4I	CCNNNNNNNGG	5 cut(s)	201, 821, 1140, 1543, 1565
Bse1I	ACTGG	2 cut(s)	486, 942
Bse21I	CCTNAGG	1 cut(s)	408
Bse3DI	GCAATG	2 cut(s)	666, 1048
Bse8I	GATNNNNATC	1 cut(s)	615
BseBI	CCWGG	8 cut(s)	318, 474, 855, 1242, 1449, 1488, 1575, 1632
BseDI	CCNNGG	5 cut(s)	132, 438, 459, 649, 1542
BseGI	GGATG	4 cut(s)	400, 517, 566, 898
BseJI	GATNNNNATC	1 cut(s)	615
BseLI	CCNNNNNNNGG	5 cut(s)	201, 821, 1140, 1543, 1565
BseMI	GCAATG	2 cut(s)	666, 1048
BseMII	CTCAG	7 cut(s)	363, 375, 543, 594, 1050, 1263, 1605
BseNI	ACTGG	2 cut(s)	486, 942
BseRI	GAGGAG	1 cut(s)	1631
BseX3I	CGGCCG	1 cut(s)	203
BseXI	GCAGC	5 cut(s)	103, 553, 835, 943, 1040
BsgI	GTGCAG	2 cut(s)	834, 1039
Bsh1236I	CGCG	1 cut(s)	202
Bsh1285I	CGRYCG	2 cut(s)	206, 1686
BshFI	GGCC	4 cut(s)	205, 648, 969, 1587
BshNI	GGYRCC	1 cut(s)	455
BsiEI	CGRYCG	2 cut(s)	206, 1686
BsiHKAI	GWGCWC	2 cut(s)	496, 691
BsiHKCI	CYCGRG	1 cut(s)	131
BsiSI	CCGG	2 cut(s)	427, 546
BslFI	GGGAC	2 cut(s)	32, 598
BslI	CCNNNNNNNGG	5 cut(s)	201, 821, 1140, 1543, 1565
BsmAI	GTCTC	3 cut(s)	68, 599, 1674
BsmBI	CGTCTC	1 cut(s)	1674
BsmFI	GGGAC	2 cut(s)	32, 598
BsmI	GAATGC	1 cut(s)	1153
BsnI	GGCC	4 cut(s)	205, 648, 969, 1587
BsoBI	CYCGRG	1 cut(s)	131
Bsp1286I	GDGCHC	3 cut(s)	350, 496, 691
Bsp1407I	TGTACA	1 cut(s)	1475
BspACI	CCGC	9 cut(s)	55, 168, 202, 443, 521, 633, 912, 1673, 1743
BspANI	GGCC	4 cut(s)	205, 648, 969, 1587
BspCNI	CTCAG	7 cut(s)	362, 374, 544, 595, 1051, 1264, 1606
BspFNI	CGCG	1 cut(s)	202
BspLI	GGNNCC	3 cut(s)	166, 457, 1090
BspPI	GGATC	5 cut(s)	581, 605, 806, 1655, 1723
BspT107I	GGYRCC	1 cut(s)	455
BsrBI	CCGCTC	2 cut(s)	633, 1675
BsrDI	GCAATG	2 cut(s)	666, 1048
BsrGI	TGTACA	1 cut(s)	1475
BsrI	ACTGG	2 cut(s)	486, 942
BssECI	CCNNGG	5 cut(s)	132, 438, 459, 649, 1542
BssNI	GRCGYC	1 cut(s)	456
BssT1I	CCWWGG	1 cut(s)	1542
Bst2UI	CCWGG	8 cut(s)	318, 474, 855, 1242, 1449, 1488, 1575, 1632
Bst4CI	ACNGT	2 cut(s)	104, 1378
BstACI	GRCGYC	1 cut(s)	456
BstAUI	TGTACA	1 cut(s)	1475
BstC8I	GCNNGC	3 cut(s)	487, 635, 752
BstENI	CCTNNNNNAGG	1 cut(s)	819
BstF5I	GGATG	4 cut(s)	400, 517, 566, 898
BstFNI	CGCG	1 cut(s)	202
BstH2I	RGCGCY	1 cut(s)	459
BstHHI	GCGC	2 cut(s)	458, 831
BstMAI	GTCTC	3 cut(s)	68, 599, 1674
BstMCI	CGRYCG	2 cut(s)	206, 1686
BstMWI	GCNNNNNNNGC	2 cut(s)	491, 1007
BstNI	CCWGG	8 cut(s)	318, 474, 855, 1242, 1449, 1488, 1575, 1632
BstNSI	RCATGY	3 cut(s)	844, 1400, 1476
BstSCI	CCNGG	9 cut(s)	316, 472, 544, 853, 1240, 1447, 1486, 1573, 1630
BstUI	CGCG	1 cut(s)	202
BstV1I	GCAGC	5 cut(s)	103, 553, 835, 943, 1040
BstX2I	RGATCY	3 cut(s)	610, 811, 920
BstYI	RGATCY	3 cut(s)	610, 811, 920
BstZI	CGGCCG	1 cut(s)	203
Bsu36I	CCTNAGG	1 cut(s)	408
BsuI	GTATCC	1 cut(s)	1516
BsuRI	GGCC	4 cut(s)	205, 648, 969, 1587
BtsCI	GGATG	4 cut(s)	400, 517, 566, 898
BtsI	GCAGTG	2 cut(s)	496, 795
BtsIMutI	CAGTG	4 cut(s)	496, 721, 795, 1056
Cac8I	GCNNGC	3 cut(s)	487, 635, 752
CfoI	GCGC	2 cut(s)	458, 831
Cfr13I	GGNCC	5 cut(s)	164, 353, 967, 1238, 1571
CsiI	ACCWGGT	2 cut(s)	1573, 1630
Csp6I	GTAC	5 cut(s)	328, 479, 935, 1476, 1649
CviAII	CATG	5 cut(s)	497, 803, 841, 1397, 1473
CviQI	GTAC	5 cut(s)	328, 479, 935, 1476, 1649
DinI	GGCGCC	1 cut(s)	457
EaeI	YGGCCR	3 cut(s)	203, 646, 1585
EagI	CGGCCG	1 cut(s)	203
EclXI	CGGCCG	1 cut(s)	203
Eco130I	CCWWGG	1 cut(s)	1542
Eco24I	GRGCYC	1 cut(s)	350
Eco47I	GGWCC	4 cut(s)	164, 353, 1238, 1571
Eco52I	CGGCCG	1 cut(s)	203
Eco57I	CTGAAG	1 cut(s)	714
Eco81I	CCTNAGG	1 cut(s)	408
Eco88I	CYCGRG	1 cut(s)	131
EcoNI	CCTNNNNNAGG	1 cut(s)	819
EcoO109I	RGGNCCY	2 cut(s)	353, 1571
EcoRI	GAATTC	1 cut(s)	1595
EcoRII	CCWGG	8 cut(s)	316, 472, 853, 1240, 1447, 1486, 1573, 1630
EcoT14I	CCWWGG	1 cut(s)	1542
EcoT38I	GRGCYC	1 cut(s)	350
EgeI	GGCGCC	1 cut(s)	457
EheI	GGCGCC	1 cut(s)	457
ErhI	CCWWGG	1 cut(s)	1542
Esp3I	CGTCTC	1 cut(s)	1674
FaeI	CATG	5 cut(s)	500, 806, 844, 1400, 1476
FaqI	GGGAC	2 cut(s)	32, 598
FatI	CATG	5 cut(s)	496, 802, 840, 1396, 1472
FauI	CCCGC	3 cut(s)	62, 175, 626
FbaI	TGATCA	1 cut(s)	1423
Fnu4HI	GCNGC	7 cut(s)	92, 203, 542, 849, 912, 957, 1054
FokI	GGATG	4 cut(s)	387, 524, 573, 905
FriOI	GRGCYC	1 cut(s)	350
Fsp4HI	GCNGC	7 cut(s)	92, 203, 542, 849, 912, 957, 1054
FspBI	CTAG	6 cut(s)	579, 809, 836, 1319, 1439, 1580
GlaI	GCGC	2 cut(s)	457, 830
GluI	GCNGC	7 cut(s)	92, 203, 542, 849, 912, 957, 1054
GsuI	CTGGAG	3 cut(s)	876, 1386, 1509
HaeII	RGCGCY	1 cut(s)	459
HaeIII	GGCC	4 cut(s)	205, 648, 969, 1587
HapII	CCGG	2 cut(s)	427, 546
HhaI	GCGC	2 cut(s)	458, 831
Hin1I	GRCGYC	1 cut(s)	456
Hin1II	CATG	5 cut(s)	500, 806, 844, 1400, 1476
Hin6I	GCGC	2 cut(s)	456, 829
HinP1I	GCGC	2 cut(s)	456, 829
HinfI	GANTC	6 cut(s)	127, 140, 254, 280, 1028, 1382
HpaII	CCGG	2 cut(s)	427, 546
HphI	GGTGA	2 cut(s)	43, 836
Hpy166II	GTNNAC	3 cut(s)	232, 246, 479
Hpy188I	TCNGA	6 cut(s)	29, 285, 948, 1005, 1033, 1108
Hpy188III	TCNNGA	7 cut(s)	131, 265, 692, 809, 1210, 1319, 1637
Hpy8I	GTNNAC	3 cut(s)	232, 246, 479
HpyAV	CCTTC	8 cut(s)	55, 499, 689, 747, 883, 890, 1207, 1218
HpyCH4III	ACNGT	2 cut(s)	104, 1378
HpyCH4IV	ACGT	1 cut(s)	97
HpyCH4V	TGCA	8 cut(s)	489, 595, 851, 872, 878, 990, 1056, 1400
HpyF10VI	GCNNNNNNNGC	2 cut(s)	491, 1007
HpySE526I	ACGT	1 cut(s)	97
Hsp92I	GRCGYC	1 cut(s)	456
Hsp92II	CATG	5 cut(s)	500, 806, 844, 1400, 1476
HspAI	GCGC	2 cut(s)	456, 829
KasI	GGCGCC	1 cut(s)	455
Ksp22I	TGATCA	1 cut(s)	1423
LmnI	GCTCC	4 cut(s)	630, 694, 1297, 1330
Lsp1109I	GCAGC	5 cut(s)	103, 553, 835, 943, 1040
LweI	GCATC	6 cut(s)	45, 192, 409, 988, 1312, 1556
MabI	ACCWGGT	2 cut(s)	1573, 1630
MaeI	CTAG	6 cut(s)	579, 809, 836, 1319, 1439, 1580
MaeII	ACGT	1 cut(s)	97
MaeIII	GTNAC	5 cut(s)	98, 104, 716, 793, 1075
MbiI	CCGCTC	2 cut(s)	633, 1675
MfeI	CAATTG	1 cut(s)	873
MflI	RGATCY	3 cut(s)	610, 811, 920
MhlI	GDGCHC	3 cut(s)	350, 496, 691
Mly113I	GGCGCC	1 cut(s)	456
MlyI	GAGTC	1 cut(s)	248
MmeI	TCCRAC	4 cut(s)	104, 177, 1116, 1693
MroXI	GAANNNNTTC	1 cut(s)	768
MseI	TTAA	2 cut(s)	1164, 1346
MspA1I	CMGCKG	1 cut(s)	914
MspI	CCGG	2 cut(s)	427, 546
MspR9I	CCNGG	9 cut(s)	318, 474, 546, 855, 1242, 1449, 1488, 1575, 1632
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	1 cut(s)	1153
MvaI	CCWGG	8 cut(s)	318, 474, 855, 1242, 1449, 1488, 1575, 1632
MvnI	CGCG	1 cut(s)	202
MwoI	GCNNNNNNNGC	2 cut(s)	491, 1007
NarI	GGCGCC	1 cut(s)	456
NciI	CCSGG	1 cut(s)	546
NlaIII	CATG	5 cut(s)	500, 806, 844, 1400, 1476
NlaIV	GGNNCC	3 cut(s)	166, 457, 1090
NmeAIII	GCCGAG	3 cut(s)	463, 484, 674
NmuCI	GTSAC	2 cut(s)	716, 793
NspI	RCATGY	3 cut(s)	844, 1400, 1476
PciI	ACATGT	2 cut(s)	840, 1472
PctI	GAATGC	1 cut(s)	1153
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	5 cut(s)	127, 140, 280, 1028, 1382
PflFI	GACNNNGTC	3 cut(s)	670, 1575, 1632
PfoI	TCCNGGA	2 cut(s)	1240, 1486
PkrI	GCNGC	7 cut(s)	93, 204, 543, 850, 913, 958, 1055
Ple19I	CGATCG	1 cut(s)	1686
PleI	GAGTC	1 cut(s)	248
PluTI	GGCGCC	1 cut(s)	459
PpsI	GAGTC	1 cut(s)	248
PpuMI	RGGWCCY	2 cut(s)	353, 1571
PscI	ACATGT	2 cut(s)	840, 1472
Psp1406I	AACGTT	1 cut(s)	97
Psp5II	RGGWCCY	2 cut(s)	353, 1571
Psp6I	CCWGG	8 cut(s)	316, 472, 853, 1240, 1447, 1486, 1573, 1630
PspGI	CCWGG	8 cut(s)	316, 472, 853, 1240, 1447, 1486, 1573, 1630
PspN4I	GGNNCC	3 cut(s)	166, 457, 1090
PspPI	GGNCC	5 cut(s)	164, 353, 967, 1238, 1571
PspPPI	RGGWCCY	2 cut(s)	353, 1571
PsuI	RGATCY	3 cut(s)	610, 811, 920
PsyI	GACNNNGTC	3 cut(s)	670, 1575, 1632
PvuI	CGATCG	1 cut(s)	1686
RsaI	GTAC	5 cut(s)	329, 480, 936, 1477, 1650
RsaNI	GTAC	5 cut(s)	328, 479, 935, 1476, 1649
SaqAI	TTAA	2 cut(s)	1164, 1346
SatI	GCNGC	7 cut(s)	92, 203, 542, 849, 912, 957, 1054
Sau96I	GGNCC	5 cut(s)	164, 353, 967, 1238, 1571
ScaI	AGTACT	1 cut(s)	329
SchI	GAGTC	1 cut(s)	248
ScrFI	CCNGG	9 cut(s)	318, 474, 546, 855, 1242, 1449, 1488, 1575, 1632
SduI	GDGCHC	3 cut(s)	350, 496, 691
SexAI	ACCWGGT	2 cut(s)	1573, 1630
SfaNI	GCATC	6 cut(s)	45, 192, 409, 988, 1312, 1556
SfoI	GGCGCC	1 cut(s)	457
SinI	GGWCC	4 cut(s)	164, 353, 1238, 1571
SmlI	CTYRAG	2 cut(s)	755, 1387
SmoI	CTYRAG	2 cut(s)	755, 1387
SsiI	CCGC	9 cut(s)	55, 168, 202, 443, 521, 633, 912, 1673, 1743
SspDI	GGCGCC	1 cut(s)	455
SspI	AATATT	1 cut(s)	768
SspMI	CTAG	6 cut(s)	579, 809, 836, 1319, 1439, 1580
StyD4I	CCNGG	9 cut(s)	316, 472, 544, 853, 1240, 1447, 1486, 1573, 1630
StyI	CCWWGG	1 cut(s)	1542
TaaI	ACNGT	2 cut(s)	104, 1378
TaiI	ACGT	1 cut(s)	100
TaqI	TCGA	7 cut(s)	138, 264, 1354, 1380, 1510, 1659, 1677
TatI	WGTACW	3 cut(s)	327, 478, 1475
TauI	GCSGC	2 cut(s)	205, 914
TfiI	GAWTC	5 cut(s)	127, 140, 280, 1028, 1382
Tru1I	TTAA	2 cut(s)	1164, 1346
Tru9I	TTAA	2 cut(s)	1164, 1346
TscAI	CASTG	4 cut(s)	496, 721, 802, 1063
TseFI	GTSAC	2 cut(s)	716, 793
TseI	GCWGC	5 cut(s)	91, 541, 848, 956, 1053
Tsp45I	GTSAC	2 cut(s)	716, 793
TspDTI	ATGAA	7 cut(s)	17, 396, 902, 909, 1041, 1512, 1684
TspGWI	ACGGA	2 cut(s)	247, 1246
TspRI	CASTG	4 cut(s)	496, 721, 802, 1063
Tth111I	GACNNNGTC	3 cut(s)	670, 1575, 1632
VpaK11BI	GGWCC	4 cut(s)	164, 353, 1238, 1571
XagI	CCTNNNNNAGG	1 cut(s)	819
XapI	RAATTY	3 cut(s)	1185, 1532, 1595
XbaI	TCTAGA	2 cut(s)	808, 1318
XceI	RCATGY	3 cut(s)	844, 1400, 1476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	120
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	6 cut(s)	579, 809, 836, 1319, 1439, 1580
ZrmI	AGTACT	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.