Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006083

Physical Location & Seq

Genomic Coordinates Reverse (-)

71091679 .. 71097735

Gene Structure 6057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0588600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGCTTCCATAAAGTCTGTGCCTTTTGTGATCGAGACCAAGGCTGAGAGCTCTGTGCTGCTCCACAGCGAGAACAGTCGCCGGCTCCGATTCCCATTCTTCACTCACCGGCGGAGGAGGGCCGGTGAGGTGAGTCTGATCAGTGGTTCAGCAAGTGGGTGTTCACAAGCTGTGGGGTTGTGTAGTGGGCAGATTAGTTCTTGCACAAAAGGTCAGCTTTGGAGAGTGAAGCCTGTTAGAGCAATTCGTAAGGTCTCTGGGGAAGGTGTGGAGGACAAAGGTGAATCAGAGGATGCGCTTCAGGCCACCATTGAAAAGAGCAAGAAGGTTCTTGCTATGCAAAGAGACCTACTTCAACAGATTGCTGAAAGAAGGAAACTGGTATCTTCTATAACAAGTAGTACTGTAGAAGAAGAAGAAGAAGATCAAGAAGAGGTTGATTCTTTTGAACAAGAGGATTCTTTTTCGGATGTAGAAAGTTCAGGTGGTGGTAATGACACTATTGAAGAACAAAATGACAGCATTGCTTCAAGCAGCTATGGTCATTCAACTGCAGAAAAGGAACTAGAAACAGTACCTTCTGCTGTTAGTAGAAGCTTTAGTGAAATTGAGAAGGAGCATGAAGAAACTGTGCCTCTTAATAAGGCTCCCTATGAGGCAGAGTCCACAAAGCATGTGAATAAGACTAGTGCCAAGTCAGAGTGGTCCGATTCTCTGCCATCTTTTATTTCAACTACTGTTGAGACATCCTCTCTGAAAGATGAAGAAGAGCATGTAGATCTGAAAGAACCAAGTTTACAGGAGGTCAATGTTGGGGTAACGGATCCTACAATCGAAGACATGAAGCCCCCTCCTTTGGCTGGGCCCAATGTCATGAATATCATATTGGTGGCAGCAGAATGTGCTCCGTGGTCGAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTTTACCAAAGGCTTTGGCTCGGCGTGGCCATAGGGTTATGGTTGTGGCACCTCGGTATGGCAATTATGCTGAGCCTCAAGATTTAGGAGTCCGGAAAGGATATAAAGTAGATGGCCAGCATATGGAAGTAGCATACTTTCACTCCTATATTGATGGCGTAGATTTTGTCTTCATTGACTCTCCTATGTTCCGTCACATGGAGAATAATATATATGGAGGAAAGCGTGAGGATATCTTAAAGCGGATGGTGTTATTTTGCAAGGCTGCTGTTGAGGCCCCTTGGCATGTTCCCTGTGGTGGCATTTGCTATGGTGATGGAAACTTGGCTTTCATTGCAAATGACTGGCATACTGCACTGTTGCCAGTGTATTTGAAGGCGTACTATCGAGACAATGGCTTGATGATATATACAAGGTCCATCCTTGTAATCCATAACATAGCTCACCAGGGTCGTGGGCCAGTAAGTGATTTCTCCTTTGTTGATCTTCCACAACACTACTTGGACCTTTTCAAATTGTATGATCCCGTTGGAGGGGAGCACTTCAATATCTTTGCAGCTGGTTTGAAGACAGCCGACCGTGTGGTTACTGTAAGTCATGGATATGCCTGGGAGGTTAAAACACCTGAAGGTGGTTGGGGATTGCATGGGATCATAAATGAAAATCACTGGAAACTCAGCGGCATTGTTAATGGAATTGATAATAAAGACTGGAATCCACAGTTTGATGTTTTCTTGAGATCAGATGGTTATACAAACTACTCCCTAGAGACACTTCAGACTGGCAAGCCTCAGTGTAAGGCAGCTTTACAGAAGGAGCTGGGTTTGCCGATCCGTGAGGATGTCCCTTTAATTGGTTTCATTGGGAGACTGGATCCCCAGAAAGGTGTTGATCTTATAGCACAGGCGATTCCGTGGATGATGGATCAAGATGTGCAACTAGTCATGTTAGGCACTGGAAGACCTGACCTGGAACAGATGCTGAAAGAGTTTGAACATCAACACAGAGACAAGGTCAGGGGATGGGTTGGTTTTTCTGTAGAAACAGCTCATAGAATAACTGCCGGTGTAGACATTTTGCTCATGCCATCGAGATTTGAGCCTTGTGGACTGAACCAACTATATGCCATGAACTATGGGACAGTTCCAGTCGTTCATGCTGTTGGTGGACTCAAAGATACTGTACATCCTTTCAATCCATATGAGGAGTCAGGACTTGGGTGGACATTTGACAGTGCTGATACAGGTAAGCTCATCCATGCATTAGGTAATTGCATATATACTTATCGAGAGTACAAGCAGAGTTGGGAAGGAATCCAGAGACGAGGGATGATGCAAGACCTAAGTTGGGACAATGCTGCTCAGAAGTATGAGGAGGTTGTTGTGGCTGCAAAGTACCAATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short_C2

Protein Analysis

783

Amino Acids

87.23

Weight (kDa)

5.34

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	293 - 535	4.2e-61	Starch synthase catalytic domain
Glycos_transf_1	PF00534	592 - 713	1.8e-14	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	598 - 736	4.5e-16	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01980 AT3G01980 AT3G01980 AT3G01980 AT3G01980 AT3G01980
fragaria_vesca	FvH4_6g53780 FvH4_6g53780 FvH4_6g53780
malus_domestica	MD09G1008700.v1.1 MD17G1001600.v1.1
prunus_persica	Prupe.3G308300_v2.0.a1
pyrus_communis	pycom15g18620 pycom17g00720 pycom17g00740
rosa_chinensis	RchiOBHm_Chr2g0175921
rosa_laevigata	RLG00000022364
rosa_multiflora	Rmu_sc0028327.1_g000001 Rmu_ssc0000114.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076950
rosa_rugosa	Rorug02G0588500 Rorug02G0588600
rosa_samantha	Rh2AG667800 Rh2BG679300 Rh2CG642100 Rh2DG692800
rosa_wichuraiana	Rw2G054740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	994
AccB7I	CCANNNNNTGG	1 cut(s)	1069
AccI	GTMKAC	1 cut(s)	2016
AccIII	TCCGGA	1 cut(s)	1038
AciI	CCGC	3 cut(s)	112, 1189, 1626
AclWI	GGATC	8 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827, 1878
AcoI	YGGCCR	2 cut(s)	973, 1060
AcuI	CTGAAG	3 cut(s)	284, 1593, 1706
AfaI	GTAC	6 cut(s)	403, 576, 1328, 2130, 2240, 2342
AhlI	ACTAGT	2 cut(s)	686, 1885
AjnI	CCWGG	3 cut(s)	1392, 1553, 1914
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
Alw21I	GWGCWC	3 cut(s)	53, 907, 1488
Alw26I	GTCTC	9 cut(s)	29, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
AlwI	GGATC	8 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827, 1878
AlwNI	CAGNNNCTG	1 cut(s)	1927
Aor13HI	TCCGGA	1 cut(s)	1038
AoxI	GGCC	7 cut(s)	120, 303, 863, 973, 1060, 1221, 1403
ApaI	GGGCCC	1 cut(s)	867
ApeKI	GCWGC	8 cut(s)	58, 534, 893, 1211, 1502, 1748, 2303, 2333
AspLEI	GCGC	1 cut(s)	298
AspS9I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
AsuHPI	GGTGA	6 cut(s)	98, 137, 142, 293, 1271, 1382
AvaII	GGWCC	3 cut(s)	705, 1362, 1450
BaeGI	GKGCMC	1 cut(s)	867
BalI	TGGCCA	2 cut(s)	975, 1062
BamHI	GGATCC	2 cut(s)	823, 1819
BanI	GGYRCC	1 cut(s)	994
BanII	GRGCYC	2 cut(s)	53, 867
BbsI	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
Bbv12I	GWGCWC	3 cut(s)	53, 907, 1488
BbvI	GCAGC	8 cut(s)	45, 546, 905, 1198, 1514, 1760, 2290, 2320
BciT130I	CCWGG	3 cut(s)	1394, 1555, 1916
BclI	TGATCA	1 cut(s)	138
BcoDI	GTCTC	9 cut(s)	29, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BcuI	ACTAGT	2 cut(s)	686, 1885
BfaI	CTAG	4 cut(s)	566, 687, 1712, 1886
BfmI	CTRYAG	3 cut(s)	405, 552, 1983
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	9 cut(s)	59, 535, 894, 1212, 1503, 1627, 1749, 2304, 2334
BlpI	GCTNAGC	1 cut(s)	1017
BlsI	GCNGC	9 cut(s)	60, 536, 895, 1213, 1504, 1628, 1750, 2305, 2335
BmcAI	AGTACT	1 cut(s)	403
Bme1390I	CCNGG	3 cut(s)	1394, 1555, 1916
Bme18I	GGWCC	3 cut(s)	705, 1362, 1450
BmgT120I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
BmiI	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
BmrFI	CCNGG	3 cut(s)	1394, 1555, 1916
BmsI	GCATC	3 cut(s)	283, 1914, 2268
BpiI	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
BplI	GAGNNNNNCTC	2 cut(s)	734, 766
BpmI	CTGGAG	1 cut(s)	963
Bpu1102I	GCTNAGC	1 cut(s)	1017
BpuEI	CTTGAG	2 cut(s)	1008, 1702
BsaI	GGTCTC	3 cut(s)	29, 259, 339
BsaJI	CCNNGG	7 cut(s)	39, 908, 998, 1226, 1393, 1554, 1859
BsaWI	WCCGGW	1 cut(s)	1038
BsaXI	ACNNNNNCTCC	4 cut(s)	109, 139, 1073, 1103
Bse118I	RCCGGY	4 cut(s)	81, 108, 122, 2009
Bse3DI	GCAATG	2 cut(s)	522, 1278
BseAI	TCCGGA	1 cut(s)	1038
BseBI	CCWGG	3 cut(s)	1394, 1555, 1916
BseDI	CCNNGG	7 cut(s)	39, 908, 998, 1226, 1393, 1554, 1859
BseMI	GCAATG	2 cut(s)	522, 1278
BseMII	CTCAG	5 cut(s)	36, 1008, 1636, 1751, 2321
BseRI	GAGGAG	3 cut(s)	130, 2165, 2333
BseSI	GKGCMC	1 cut(s)	867
BseXI	GCAGC	8 cut(s)	45, 546, 905, 1198, 1514, 1760, 2290, 2320
BseYI	CCCAGC	2 cut(s)	860, 1765
BsgI	GTGCAG	1 cut(s)	1284
Bsh1285I	CGRYCG	1 cut(s)	1525
BshFI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BshNI	GGYRCC	1 cut(s)	994
BsiEI	CGRYCG	1 cut(s)	1525
BsiHKAI	GWGCWC	3 cut(s)	53, 907, 1488
BsiSI	CCGG	5 cut(s)	82, 109, 123, 1039, 2010
BslFI	GGGAC	3 cut(s)	1775, 2098, 2309
BsmAI	GTCTC	9 cut(s)	29, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BsmBI	CGTCTC	1 cut(s)	2260
BsmFI	GGGAC	3 cut(s)	1775, 2098, 2309
BsnI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
Bso31I	GGTCTC	3 cut(s)	29, 259, 339
Bsp120I	GGGCCC	1 cut(s)	863
Bsp1286I	GDGCHC	4 cut(s)	53, 867, 907, 1488
Bsp13I	TCCGGA	1 cut(s)	1038
Bsp1407I	TGTACA	1 cut(s)	2128
Bsp1720I	GCTNAGC	1 cut(s)	1017
BspACI	CCGC	3 cut(s)	112, 1189, 1626
BspANI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BspCNI	CTCAG	5 cut(s)	37, 1009, 1635, 1750, 2320
BspEI	TCCGGA	1 cut(s)	1038
BspHI	TCATGA	1 cut(s)	873
BspLI	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
BspMAI	CTGCAG	1 cut(s)	556
BspPI	GGATC	8 cut(s)	818, 831, 1463, 1604, 1771, 1814, 1827, 1878
BspQI	GCTCTTC	1 cut(s)	762
BspT107I	GGYRCC	1 cut(s)	994
BspTNI	GGTCTC	3 cut(s)	29, 259, 339
BsrDI	GCAATG	2 cut(s)	522, 1278
BsrFI	RCCGGY	4 cut(s)	81, 108, 122, 2009
BsrGI	TGTACA	1 cut(s)	2128
BssAI	RCCGGY	4 cut(s)	81, 108, 122, 2009
BssECI	CCNNGG	7 cut(s)	39, 908, 998, 1226, 1393, 1554, 1859
BssT1I	CCWWGG	2 cut(s)	39, 1226
Bst2UI	CCWGG	3 cut(s)	1394, 1555, 1916
Bst6I	CTCTTC	2 cut(s)	426, 762
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstAUI	TGTACA	1 cut(s)	2128
BstC8I	GCNNGC	3 cut(s)	83, 1064, 1733
BstDEI	CTNAG	6 cut(s)	45, 1017, 1622, 1737, 2288, 2307
BstDSI	CCRYGG	2 cut(s)	908, 1859
BstHHI	GCGC	1 cut(s)	298
BstMAI	GTCTC	9 cut(s)	29, 259, 339, 737, 1329, 1709, 1807, 1947, 2260
BstMCI	CGRYCG	1 cut(s)	1525
BstMWI	GCNNNNNNNGC	5 cut(s)	302, 902, 1220, 1280, 1771
BstNI	CCWGG	3 cut(s)	1394, 1555, 1916
BstNSI	RCATGY	3 cut(s)	677, 776, 1235
BstSCI	CCNGG	3 cut(s)	1392, 1553, 1914
BstSFI	CTRYAG	3 cut(s)	405, 552, 1983
BstSLI	GKGCMC	1 cut(s)	867
BstV1I	GCAGC	8 cut(s)	45, 546, 905, 1198, 1514, 1760, 2290, 2320
BstV2I	GAAGAC	4 cut(s)	843, 1108, 1520, 1912
BstX2I	RGATCY	3 cut(s)	778, 823, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	3 cut(s)	778, 823, 1819
BsuRI	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
BtgI	CCRYGG	2 cut(s)	908, 1859
BtsIMutI	CAGTG	7 cut(s)	148, 1301, 1317, 1612, 1745, 1899, 2185
Cac8I	GCNNGC	3 cut(s)	83, 1064, 1733
CaiI	CAGNNNCTG	1 cut(s)	1927
CciI	TCATGA	1 cut(s)	873
CfoI	GCGC	1 cut(s)	298
Cfr10I	RCCGGY	4 cut(s)	81, 108, 122, 2009
Cfr13I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
Csp6I	GTAC	6 cut(s)	402, 575, 1327, 2129, 2239, 2341
CviQI	GTAC	6 cut(s)	402, 575, 1327, 2129, 2239, 2341
DdeI	CTNAG	6 cut(s)	45, 1017, 1622, 1737, 2288, 2307
EaeI	YGGCCR	2 cut(s)	973, 1060
Eam1104I	CTCTTC	2 cut(s)	426, 762
EarI	CTCTTC	2 cut(s)	426, 762
EciI	GGCGGA	1 cut(s)	127
Ecl136II	GAGCTC	1 cut(s)	51
Eco130I	CCWWGG	2 cut(s)	39, 1226
Eco24I	GRGCYC	2 cut(s)	53, 867
Eco31I	GGTCTC	3 cut(s)	29, 259, 339
Eco32I	GATATC	1 cut(s)	1180
Eco47I	GGWCC	3 cut(s)	705, 1362, 1450
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	3 cut(s)	284, 1593, 1706
EcoICRI	GAGCTC	1 cut(s)	51
EcoO109I	RGGNCCY	1 cut(s)	1222
EcoRII	CCWGG	3 cut(s)	1392, 1553, 1914
EcoRV	GATATC	1 cut(s)	1180
EcoT14I	CCWWGG	2 cut(s)	39, 1226
EcoT22I	ATGCAT	1 cut(s)	2209
EcoT38I	GRGCYC	2 cut(s)	53, 867
ErhI	CCWWGG	2 cut(s)	39, 1226
Esp3I	CGTCTC	1 cut(s)	2260
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FaqI	GGGAC	3 cut(s)	1775, 2098, 2309
FauNDI	CATATG	2 cut(s)	1068, 2146
FbaI	TGATCA	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	2016
Fnu4HI	GCNGC	9 cut(s)	59, 535, 894, 1212, 1503, 1627, 1749, 2304, 2334
FriOI	GRGCYC	2 cut(s)	53, 867
Fsp4HI	GCNGC	9 cut(s)	59, 535, 894, 1212, 1503, 1627, 1749, 2304, 2334
FspBI	CTAG	4 cut(s)	566, 687, 1712, 1886
GlaI	GCGC	1 cut(s)	297
GluI	GCNGC	9 cut(s)	59, 535, 894, 1212, 1503, 1627, 1749, 2304, 2334
GsaI	CCCAGC	2 cut(s)	864, 1769
GsuI	CTGGAG	1 cut(s)	963
HaeIII	GGCC	7 cut(s)	122, 305, 865, 975, 1062, 1223, 1405
HapII	CCGG	5 cut(s)	82, 109, 123, 1039, 2010
HhaI	GCGC	1 cut(s)	298
Hin6I	GCGC	1 cut(s)	296
HinP1I	GCGC	1 cut(s)	296
HindIII	AAGCTT	1 cut(s)	595
HpaII	CCGG	5 cut(s)	82, 109, 123, 1039, 2010
HphI	GGTGA	6 cut(s)	98, 137, 142, 293, 1271, 1382
Hpy166II	GTNNAC	7 cut(s)	164, 666, 797, 2017, 2054, 2114, 2169
Hpy8I	GTNNAC	7 cut(s)	164, 666, 797, 2017, 2054, 2114, 2169
HpyAV	CCTTC	9 cut(s)	257, 319, 366, 588, 607, 1315, 1568, 1753, 2249
HpyF10VI	GCNNNNNNNGC	5 cut(s)	302, 902, 1220, 1280, 1771
HpyF3I	CTNAG	6 cut(s)	45, 1017, 1622, 1737, 2288, 2307
HspAI	GCGC	1 cut(s)	296
Kpn2I	TCCGGA	1 cut(s)	1038
KroI	GCCGGC	1 cut(s)	81
KroNI	GCCGGC	1 cut(s)	83
Ksp22I	TGATCA	1 cut(s)	138
LguI	GCTCTTC	1 cut(s)	762
LmnI	GCTCC	8 cut(s)	66, 90, 616, 652, 910, 944, 1483, 1762
Lsp1109I	GCAGC	8 cut(s)	45, 546, 905, 1198, 1514, 1760, 2290, 2320
LweI	GCATC	3 cut(s)	283, 1914, 2268
MaeI	CTAG	4 cut(s)	566, 687, 1712, 1886
MaeIII	GTNAC	3 cut(s)	817, 1139, 1531
MflI	RGATCY	3 cut(s)	778, 823, 1819
MhlI	GDGCHC	4 cut(s)	53, 867, 907, 1488
MlsI	TGGCCA	2 cut(s)	975, 1062
MluCI	AATT	7 cut(s)	243, 606, 1009, 1460, 1641, 1797, 2215
MluNI	TGGCCA	2 cut(s)	975, 1062
MlyI	GAGTC	6 cut(s)	142, 671, 1044, 1118, 2109, 2162
MmeI	TCCRAC	1 cut(s)	1456
Mox20I	TGGCCA	2 cut(s)	975, 1062
Mph1103I	ATGCAT	1 cut(s)	2209
MroI	TCCGGA	1 cut(s)	1038
MroNI	GCCGGC	1 cut(s)	81
MscI	TGGCCA	2 cut(s)	975, 1062
MseI	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
MslI	CAYNNNNRTG	2 cut(s)	887, 1548
Msp20I	TGGCCA	2 cut(s)	975, 1062
MspA1I	CMGCKG	2 cut(s)	1505, 1626
MspI	CCGG	5 cut(s)	82, 109, 123, 1039, 2010
MspR9I	CCNGG	3 cut(s)	1394, 1555, 1916
MvaI	CCWGG	3 cut(s)	1394, 1555, 1916
MwoI	GCNNNNNNNGC	5 cut(s)	302, 902, 1220, 1280, 1771
NaeI	GCCGGC	1 cut(s)	83
NdeI	CATATG	2 cut(s)	1068, 2146
NgoMIV	GCCGGC	1 cut(s)	81
NlaIV	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
NmeAIII	GCCGAG	1 cut(s)	946
NmuCI	GTSAC	1 cut(s)	1139
NsiI	ATGCAT	1 cut(s)	2209
NspI	RCATGY	3 cut(s)	677, 776, 1235
PagI	TCATGA	1 cut(s)	873
PciSI	GCTCTTC	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	1 cut(s)	85
PdiI	GCCGGC	1 cut(s)	83
PfeI	GAWTC	8 cut(s)	90, 284, 440, 458, 710, 1660, 1855, 2259
PflFI	GACNNNGTC	1 cut(s)	1958
PflMI	CCANNNNNTGG	1 cut(s)	1069
PkrI	GCNGC	9 cut(s)	60, 536, 895, 1213, 1504, 1628, 1750, 2305, 2335
PleI	GAGTC	6 cut(s)	141, 670, 1043, 1118, 2109, 2161
PpsI	GAGTC	6 cut(s)	141, 670, 1043, 1118, 2109, 2161
Psp124BI	GAGCTC	1 cut(s)	53
Psp6I	CCWGG	3 cut(s)	1392, 1553, 1914
PspFI	CCCAGC	2 cut(s)	860, 1765
PspGI	CCWGG	3 cut(s)	1392, 1553, 1914
PspN4I	GGNNCC	7 cut(s)	86, 648, 825, 865, 996, 1224, 1821
PspOMI	GGGCCC	1 cut(s)	863
PspPI	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
PsrI	GAACNNNNNNTAC	2 cut(s)	780, 812
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	1 cut(s)	1927
PsuI	RGATCY	3 cut(s)	778, 823, 1819
PsyI	GACNNNGTC	1 cut(s)	1958
PvuII	CAGCTG	1 cut(s)	1505
RsaI	GTAC	6 cut(s)	403, 576, 1328, 2130, 2240, 2342
RsaNI	GTAC	6 cut(s)	402, 575, 1327, 2129, 2239, 2341
RseI	CAYNNNNRTG	2 cut(s)	887, 1548
SacI	GAGCTC	1 cut(s)	53
SapI	GCTCTTC	1 cut(s)	762
SaqAI	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
SatI	GCNGC	9 cut(s)	59, 535, 894, 1212, 1503, 1627, 1749, 2304, 2334
Sau96I	GGNCC	8 cut(s)	120, 705, 863, 864, 1222, 1362, 1403, 1450
ScaI	AGTACT	1 cut(s)	403
SchI	GAGTC	6 cut(s)	142, 671, 1044, 1118, 2109, 2162
ScrFI	CCNGG	3 cut(s)	1394, 1555, 1916
SduI	GDGCHC	4 cut(s)	53, 867, 907, 1488
SfaNI	GCATC	3 cut(s)	283, 1914, 2268
SfcI	CTRYAG	3 cut(s)	405, 552, 1983
SgrAI	CRCCGGYG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	705, 1362, 1450
SmiMI	CAYNNNNRTG	2 cut(s)	887, 1548
SmlI	CTYRAG	2 cut(s)	1023, 1681
SmoI	CTYRAG	2 cut(s)	1023, 1681
SpeI	ACTAGT	2 cut(s)	686, 1885
Sse9I	AATT	7 cut(s)	243, 606, 1009, 1460, 1641, 1797, 2215
SsiI	CCGC	3 cut(s)	112, 1189, 1626
SspMI	CTAG	4 cut(s)	566, 687, 1712, 1886
SstI	GAGCTC	1 cut(s)	53
StyD4I	CCNGG	3 cut(s)	1392, 1553, 1914
StyI	CCWWGG	2 cut(s)	39, 1226
TaqI	TCGA	6 cut(s)	33, 834, 914, 1333, 2036, 2233
TasI	AATT	7 cut(s)	243, 606, 1009, 1460, 1641, 1797, 2215
TatI	WGTACW	3 cut(s)	401, 2128, 2238
TauI	GCSGC	1 cut(s)	1629
TfiI	GAWTC	8 cut(s)	90, 284, 440, 458, 710, 1660, 1855, 2259
Tru1I	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
Tru9I	TTAA	5 cut(s)	639, 1184, 1563, 1635, 1796
TscAI	CASTG	7 cut(s)	148, 1308, 1317, 1619, 1745, 1906, 2185
TseFI	GTSAC	1 cut(s)	1139
TseI	GCWGC	8 cut(s)	58, 534, 893, 1211, 1502, 1748, 2303, 2333
Tsp45I	GTSAC	1 cut(s)	1139
TspGWI	ACGGA	5 cut(s)	836, 897, 1127, 1769, 1848
TspRI	CASTG	7 cut(s)	148, 1308, 1317, 1619, 1745, 1906, 2185
Tth111I	GACNNNGTC	1 cut(s)	1958
Van91I	CCANNNNNTGG	1 cut(s)	1069
VpaK11BI	GGWCC	3 cut(s)	705, 1362, 1450
XceI	RCATGY	3 cut(s)	677, 776, 1235
XmiI	GTMKAC	1 cut(s)	2016
XspI	CTAG	4 cut(s)	566, 687, 1712, 1886
ZrmI	AGTACT	1 cut(s)	403
Zsp2I	ATGCAT	1 cut(s)	2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.