Rw2G054740

Enoyl-(Acyl carrier protein) reductase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
82350290 .. 82353382
3093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G054740.1

Sequence Viewer

Length: 699 bp
ATGGGCAAAGAGAGCTCTTTGAGGAGTGTTGCAGAGAAAATAAGGGGATCACTGGAAGGTGTGGTGTCTATAGAGGTGGTTGGTGTGGGCATGGAGGAGGAGAGAGAAGGAGTTTTTGATGAGGCTGTGGATAAGGCTTGTGAAATCTTGGGTAATTTGGATGCCTTTGTGCATTGCTATGCCTATGAAGGAGAGATGCAAGAGCATTTGCAATTATCTGAAGATGAGTTTAAGAAAATAATGAAGATAAATTTCATGTCTGCTTGGTTTCTGGTAAAGGCCGTTGGCAGAAGAATGCGAGATCATAAGTCAGGAGGTTCCATCATATTGTTGACCTCGATTGTTGGAGCTGAAAGAGGGCTTTATACAGGAGCTGCCGCCTATGGTGCATGTTCAGCAGCACTGCAGCAGTTAGTAAGGTCATCGGCATTGGAGATTGGAAAATACAAGATCAGGGTCAATGCAATTGCACGTGGTTTGCATGTGGAAGATGAATTTCCCATGTCTGTGGGAATAGATAGAGCAAAGAAGCTGGTGAAGGATGCAGTTCCACTGGAAAGATGGCTTGATGTTACAAATGATGTTGCTTCAACTGTCATATATTTAGTCAGTGATGGTTCAAGGTACATGACTGGCACAACTATATTTGTCGATGGGGCACAGTCTCTCGTGAGGCCTCGGATGCGTTCTTATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

232

Amino Acids

25.58

Weight (kDa)

5.89

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 19 - 159 2.1e-20 short chain dehydrogenase
adh_short_C2 PF13561 36 - 219 2.1e-37 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 378
AclWI GGATC 1 cut(s) 55
AcsI RAATTY 2 cut(s) 250, 494
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 473
AfaI GTAC 1 cut(s) 626
AgsI TTSAA 2 cut(s) 591, 621
AluBI AGCT 4 cut(s) 15, 350, 374, 532
AluI AGCT 4 cut(s) 15, 350, 374, 532
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 1 cut(s) 669
AlwI GGATC 1 cut(s) 55
AlwNI CAGNNNCTG 1 cut(s) 374
AoxI GGCC 2 cut(s) 279, 674
ApeKI GCWGC 3 cut(s) 374, 398, 406
ApoI RAATTY 2 cut(s) 250, 494
AsuHPI GGTGA 1 cut(s) 547
BaeGI GKGCMC 1 cut(s) 661
BanII GRGCYC 1 cut(s) 17
BauI CACGAG 1 cut(s) 668
BbrPI CACGTG 1 cut(s) 473
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 3 cut(s) 361, 410, 418
BccI CCATC 4 cut(s) 329, 555, 608, 647
BceAI ACGGC 1 cut(s) 266
BcoDI GTCTC 1 cut(s) 669
BfmI CTRYAG 2 cut(s) 69, 404
BisI GCNGC 4 cut(s) 375, 378, 399, 407
BlsI GCNGC 4 cut(s) 376, 379, 400, 408
BmiI GGNNCC 1 cut(s) 319
BmsI GCATC 4 cut(s) 151, 186, 532, 672
BsaAI YACGTR 1 cut(s) 473
BsaJI CCNNGG 1 cut(s) 677
Bse1I ACTGG 3 cut(s) 57, 558, 637
Bse3DI GCAATG 1 cut(s) 172
BseDI CCNNGG 1 cut(s) 677
BseGI GGATG 3 cut(s) 166, 547, 687
BseMI GCAATG 1 cut(s) 172
BseNI ACTGG 3 cut(s) 57, 558, 637
BseRI GAGGAG 3 cut(s) 37, 110, 113
BseSI GKGCMC 1 cut(s) 661
BseXI GCAGC 3 cut(s) 361, 410, 418
BshFI GGCC 2 cut(s) 281, 676
BsiHKAI GWGCWC 1 cut(s) 17
BsmAI GTCTC 1 cut(s) 669
BsmI GAATGC 1 cut(s) 300
BsnI GGCC 2 cut(s) 281, 676
Bsp1286I GDGCHC 2 cut(s) 17, 661
Bsp143I GATC 3 cut(s) 47, 301, 450
BspACI CCGC 1 cut(s) 378
BspANI GGCC 2 cut(s) 281, 676
BspLI GGNNCC 1 cut(s) 319
BspMAI CTGCAG 1 cut(s) 408
BspPI GGATC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 172
BsrI ACTGG 3 cut(s) 57, 558, 637
BssECI CCNNGG 1 cut(s) 677
BssMI GATC 3 cut(s) 47, 301, 450
BssSI CACGAG 1 cut(s) 668
Bst2BI CACGAG 1 cut(s) 668
Bst4CI ACNGT 2 cut(s) 595, 663
BstBAI YACGTR 1 cut(s) 473
BstF5I GGATG 3 cut(s) 166, 547, 687
BstKTI GATC 3 cut(s) 50, 304, 453
BstMAI GTCTC 1 cut(s) 669
BstMBI GATC 3 cut(s) 47, 301, 450
BstMWI GCNNNNNNNGC 4 cut(s) 12, 386, 395, 682
BstNSI RCATGY 2 cut(s) 393, 485
BstSFI CTRYAG 2 cut(s) 69, 404
BstSLI GKGCMC 1 cut(s) 661
BstV1I GCAGC 3 cut(s) 361, 410, 418
BstXI CCANNNNNNTGG 1 cut(s) 508
BsuRI GGCC 2 cut(s) 281, 676
BtsCI GGATG 3 cut(s) 166, 547, 687
BtsI GCAGTG 1 cut(s) 401
BtsIMutI CAGTG 4 cut(s) 50, 401, 551, 616
CaiI CAGNNNCTG 1 cut(s) 374
Csp6I GTAC 1 cut(s) 625
CviAII CATG 6 cut(s) 91, 256, 390, 482, 502, 628
CviQI GTAC 1 cut(s) 625
DpnI GATC 3 cut(s) 49, 303, 452
DpnII GATC 3 cut(s) 47, 301, 450
Ecl136II GAGCTC 1 cut(s) 15
Eco147I AGGCCT 1 cut(s) 676
Eco24I GRGCYC 1 cut(s) 17
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 473
EcoICRI GAGCTC 1 cut(s) 15
EcoT38I GRGCYC 1 cut(s) 17
FaeI CATG 6 cut(s) 94, 259, 393, 485, 505, 631
FatI CATG 6 cut(s) 90, 255, 389, 481, 501, 627
Fnu4HI GCNGC 4 cut(s) 375, 378, 399, 407
FokI GGATG 3 cut(s) 173, 554, 694
FriOI GRGCYC 1 cut(s) 17
Fsp4HI GCNGC 4 cut(s) 375, 378, 399, 407
GluI GCNGC 4 cut(s) 375, 378, 399, 407
HaeIII GGCC 2 cut(s) 281, 676
Hin1II CATG 6 cut(s) 94, 259, 393, 485, 505, 631
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HphI GGTGA 1 cut(s) 547
Hpy166II GTNNAC 1 cut(s) 333
Hpy188I TCNGA 2 cut(s) 220, 681
Hpy188III TCNNGA 2 cut(s) 312, 670
Hpy8I GTNNAC 1 cut(s) 333
HpyAV CCTTC 4 cut(s) 50, 101, 182, 532
HpyCH4III ACNGT 2 cut(s) 595, 663
HpyCH4IV ACGT 1 cut(s) 472
HpyF10VI GCNNNNNNNGC 4 cut(s) 12, 386, 395, 682
HpySE526I ACGT 1 cut(s) 472
Hsp92II CATG 6 cut(s) 94, 259, 393, 485, 505, 631
Kzo9I GATC 3 cut(s) 47, 301, 450
LmnI GCTCC 2 cut(s) 347, 371
LpnPI CCDG 8 cut(s) 38, 257, 297, 354, 439, 518, 539, 618
Lsp1109I GCAGC 3 cut(s) 361, 410, 418
LweI GCATC 4 cut(s) 151, 186, 532, 672
MaeII ACGT 1 cut(s) 472
MaeIII GTNAC 1 cut(s) 571
MalI GATC 3 cut(s) 49, 303, 452
MboI GATC 3 cut(s) 47, 301, 450
MboII GAAGA 4 cut(s) 233, 256, 303, 500
MfeI CAATTG 1 cut(s) 465
MhlI GDGCHC 2 cut(s) 17, 661
MluCI AATT 5 cut(s) 154, 212, 250, 465, 494
MmeI TCCRAC 1 cut(s) 325
MseI TTAA 1 cut(s) 231
MslI CAYNNNNRTG 2 cut(s) 177, 506
MunI CAATTG 1 cut(s) 465
Mva1269I GAATGC 1 cut(s) 300
MwoI GCNNNNNNNGC 4 cut(s) 12, 386, 395, 682
NdeII GATC 3 cut(s) 47, 301, 450
NlaIII CATG 6 cut(s) 94, 259, 393, 485, 505, 631
NlaIV GGNNCC 1 cut(s) 319
NspI RCATGY 2 cut(s) 393, 485
PceI AGGCCT 1 cut(s) 676
PctI GAATGC 1 cut(s) 300
PkrI GCNGC 4 cut(s) 376, 379, 400, 408
PmaCI CACGTG 1 cut(s) 473
PmlI CACGTG 1 cut(s) 473
Ppu21I YACGTR 1 cut(s) 473
Psp124BI GAGCTC 1 cut(s) 17
PspCI CACGTG 1 cut(s) 473
PspN4I GGNNCC 1 cut(s) 319
PstI CTGCAG 1 cut(s) 408
PstNI CAGNNNCTG 1 cut(s) 374
RsaI GTAC 1 cut(s) 626
RsaNI GTAC 1 cut(s) 625
RseI CAYNNNNRTG 2 cut(s) 177, 506
SacI GAGCTC 1 cut(s) 17
SaqAI TTAA 1 cut(s) 231
SatI GCNGC 4 cut(s) 375, 378, 399, 407
Sau3AI GATC 3 cut(s) 47, 301, 450
SduI GDGCHC 2 cut(s) 17, 661
SfaNI GCATC 4 cut(s) 151, 186, 532, 672
SfcI CTRYAG 2 cut(s) 69, 404
SmiMI CAYNNNNRTG 2 cut(s) 177, 506
Sse9I AATT 5 cut(s) 154, 212, 250, 465, 494
SseBI AGGCCT 1 cut(s) 676
SsiI CCGC 1 cut(s) 378
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 676
TaaI ACNGT 2 cut(s) 595, 663
TaiI ACGT 1 cut(s) 475
TaqI TCGA 2 cut(s) 338, 651
TasI AATT 5 cut(s) 154, 212, 250, 465, 494
TauI GCSGC 1 cut(s) 380
Tru1I TTAA 1 cut(s) 231
Tru9I TTAA 1 cut(s) 231
TscAI CASTG 4 cut(s) 57, 408, 558, 616
TseI GCWGC 3 cut(s) 374, 398, 406
TspDTI ATGAA 4 cut(s) 201, 244, 257, 507
TspRI CASTG 4 cut(s) 57, 408, 558, 616
XapI RAATTY 2 cut(s) 250, 494
XceI RCATGY 2 cut(s) 393, 485
XcmI CCANNNNNNNNNTGG 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.