Rorug02G0607600

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012632
Physical Location & Seq
Reverse (-)
72469287 .. 72475844
6558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0607600.1

Sequence Viewer

Length: 2871 bp
ATGAGTGTACGAGGCAATACGATTGTCCAACCCGTAGGAAATCCAAGTATTGACGGGACACGTTGGCAGACTATTGAAGACATTCAATTGTGCAAGTCTTGGAAGGCTGTTAGCCAAGATCCGGCAATCGGTACGGATCGAAGAAAAGATGATCTATGGATAGAGGTACGCCAACACTATGCCGAACATTGGGATGGATATGTCCGAACATTGCAAGCTTTTCAAGGGAGGTGGAAAACCTTGAAAGTCGAACTTTATGCTTGGCATTGTGCGTTAAGGCAAGCGAAATTGTGGTACAAGAGTGGTGCGAATATGATTGATGAGATCGAAACAGCTAGCTCGCACTGTGACATGGCGGTTGTGGGGGATTTTGTTGTAGGGAAAGCACTCGACGCACTGTATGCCGGTGTGGAAAAGCTGATTGCCAATAATCTACTCTTTAAATCCCTCTCCACCGACATCAAATCTAAGCTAGACTCTTTGAGACGGATGATTCACAAGATGGTACAGCGTAACAAGCAATCCGATTGTCCAGAGGATCCAGTACTAAGAGACTTACGAGTACTAATGGAGGAAGGCGCAATGCTCGTGGGTAACTGCTCTGAGGTTCGTAGTTGGCACATCTACAAGAAGTACAAATACACCAACAAACTTCTCAAGTTGAATGAATCTCTTGAGAATCAGTTAGCTTTACTGAATGTGCGTGTAGCAGGTGTTGTAGACGAGAACAATGGTATGCTACATGAAATCTTAGTTATTGTGAATCCAAACAAATCTACAGAAATTGAAGATCGGTGTGCACTACCTGAACTACCGCCACTTATAGTTGGATTGCATATTCCATTGGAGAAATTGAAGACGGAATTGTTTAAGGATGAGGTATCGAGGCTTGTACTGACTGGTCCCGGAGGATGTGGGAAAACTACTTTGGCATCAAAGTTTTGTCAAGATCAAGACGTCAAAGATAAATTCAAGAACAACATCTTCTTCGTCACTGTTTCTAAAAAGCCCAATTTGGAGCTTATTATGAAAGTGCTATACAAACAAAAGGGTTATGAGGTACCTACTTTCCAGAATGGAGTCTTTCCAGTGAAATGGCTGCAACAAATTGTGAAGGAAAAAGGTAATGATCCTTTATTGTTGGTCTTGGATGATGTTTGGTCTGGATCAGAATCTGTTCTTCAGACGTTTGAATTCAAAATGTCAAATTACAAGATTTTAGTGACATCGAGGTCTGAATTTTTGGGATTCGGTTCTTCATATCGTCTACAACTATTAGACAATGACAATGCAATGCAGCTATTTCATCATACAGCATCCTTGGGAGATAAGAGCTCTCATATTCCAACACATCTTTCAAAAGAGATAGTAAAGCGCTGTAATGGATTTCCACTGGCCATTACAGTGGTGGGAAGATCACTTTGCGGTAAACCTATAGAAATGTGGCGAAGCAGAGTAATTGAATGGTCGAAAGGTTATTCTATTTTGGATTTTGAGACAGAATTGCTTCTTCGCCTCAAAACTAGCTTAGATGCCTTAGATAATGAAATGCCTATGGTTAAGGAATGTTTCTTAGACCTAGGTGTGTTTCCAGAAGATGCTACTATCGAAGTTACAGCTCTCATTGATATGTGGGCAGAGTTGTATGATTTGGACTTGGGGACTTTATGCATAGCCAAACTCTATGAACTCAACAATCGCAGTCTAGCTAATTTGTCACGATTTAGAGGTATTGGGTTGATAGTTGAGGAGGATGGAGACTATAGTGACTACACTGTTAAACAACATGATTTGCTTAGAGAATTGGCTATCTACCATTCGAAACGAGATCCGATGGAGCATAGAGAGAATGGAGAATTCTCTGTGAAATGGCCCGACTTGCAACTACCTGAAGCACAGGTTCTAGTGTTGAATTTTCAGACGCAATATAACTTTGCCTTGCCCGAATGTGTGGAGAAAATGGAAAAGCTCAAGATGCTCGTTCTCATAAATTCTAGCTTTTATAGTAACATAGATAATTTTCAACTTCTGGATTCCTTATCAAATCTAAGGAGTATTAGATTAGATGGCCTCAATCTTTCTTTCATAACCGAGAGCCCGGTACAGTTGAAGACTCTACACAAGTTATATTTGGTAAACGGTGAATCTCTCGGCAACGGTCCTGTCAAATTATCACATGTATTTCCAAATCTGAAGGAAATGTTCATTGATTGGTTCATCAAATTGGAGGAATTTCCTGCAGAGCTCTGCGAGCTGATTGAATTAACAAAGCTCACAATCGGCAGTTGTAATGAGCTTTCTGGCTTGCCTGAAGCGATTGGAAATCTGGTCAATTTAGAAGTGTTGAGACTTCGGTACAATTTAGAGCTTTCAGAGGTTCCAGACTCGATTGGAAATCTCAACAAATTAAAAATTTTTGAGATTTCTGCTTGCCATAAAATTGAGAAATTGCCTGAACACATAGGTGAGCTGAAGTGTTTAACAAATCTCCGCATCATGTGGTGCGATTTGCTATCTGCCTTGCCTGAAGCGATTGGAAATTTGGTCAATCTAGAAGTATTGAGTCTAAGGTTCTGTGACAGGTTGTCAGAGTTGCCAGAGTCGATTAGAAATCTCAAAAAGTTAAACTTTCTTGACATTCATAATTGCAGCATCATCAAGGAGTTGCCTGAACAGATTGGTGAATTGAAGAGTTTAAGAATGCTGCAAATGAGTGGTTGCTCCGAATTGAGAAACCTGCCTCAATCAGTTTCAGATCTTGAGCAGTTAGAGGAAGTGATATGCGATGAGTGGGACGAAACACATCTATGGACACCCTTGTTACCCACTCTCAAAAACCTTCGCATCGTGGTGTATAAGGAGGAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

956

Amino Acids

109.29

Weight (kDa)

5.51

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 121 - 229 1.4e-15 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 282 - 439 1.9e-17 NB-ARC domain
LRR_14 PF23598 749 - 858 2.8e-13 Leucine-rich repeat region
LRR_14 PF23598 844 - 950 1.1e-13 Leucine-rich repeat region
LRR_13 PF23286 848 - 919 1.8e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 701
AasI GACNNNNNNGTC 1 cut(s) 1231
AatII GACGTC 1 cut(s) 960
Acc36I ACCTGC 2 cut(s) 701, 2745
Acc65I GGTACC 1 cut(s) 1060
AccB1I GGYRCC 1 cut(s) 1060
AccI GTMKAC 2 cut(s) 720, 1267
AciI CCGC 4 cut(s) 356, 815, 1425, 2491
AclWI GGATC 7 cut(s) 113, 144, 533, 546, 1124, 1174, 1823
AcoI YGGCCR 1 cut(s) 1395
AcsI RAATTY 9 cut(s) 968, 1193, 1238, 1856, 1912, 1990, 2231, 2412, 2539
AcuI CTGAAG 6 cut(s) 1166, 1911, 2213, 2331, 2492, 2547
AcyI GRCGYC 1 cut(s) 957
AfeI AGCGCT 1 cut(s) 1376
AfiI CCNNNNNNNGG 3 cut(s) 121, 128, 189
AflIII ACRYGT 2 cut(s) 59, 2176
AhdI GACNNNNNGTC 1 cut(s) 2584
AjuI GAANNNNNNNTTGG 4 cut(s) 911, 943, 1339, 1371
AleI CACNNNNGTG 1 cut(s) 2463
Alw21I GWGCWC 3 cut(s) 802, 1337, 2247
Alw26I GTCTC 5 cut(s) 478, 546, 1490, 1752, 2341
Alw44I GTGCAC 1 cut(s) 798
AlwI GGATC 7 cut(s) 113, 144, 533, 546, 1124, 1174, 1823
AlwNI CAGNNNCTG 1 cut(s) 1175
Aor51HI AGCGCT 1 cut(s) 1376
AoxI GGCC 3 cut(s) 1395, 1871, 2068
ApaLI GTGCAC 1 cut(s) 798
ApeKI GCWGC 4 cut(s) 1099, 1297, 2649, 2704
ApoI RAATTY 9 cut(s) 968, 1193, 1238, 1856, 1912, 1990, 2231, 2412, 2539
Asp700I GAANNNNTTC 3 cut(s) 81, 1176, 1506
Asp718I GGTACC 1 cut(s) 1060
AspA2I CCTAGG 1 cut(s) 1579
AspLEI GCGC 2 cut(s) 581, 1377
AspS9I GGNCC 3 cut(s) 902, 1872, 2159
AsuC2I CCSGG 2 cut(s) 906, 2099
AsuHPI GGTGA 3 cut(s) 2153, 2477, 2693
AsuII TTCGAA 1 cut(s) 1820
AsuNHI GCTAGC 1 cut(s) 335
AvaII GGWCC 2 cut(s) 902, 2159
AvrII CCTAGG 1 cut(s) 1579
BaeGI GKGCMC 1 cut(s) 802
BaeI ACNNNNGTAYC 2 cut(s) 286, 319
BalI TGGCCA 1 cut(s) 1397
BamHI GGATCC 1 cut(s) 538
BanI GGYRCC 1 cut(s) 1060
BanII GRGCYC 3 cut(s) 1337, 2099, 2247
BarI GAAGNNNNNNTAC 2 cut(s) 623, 655
BauI CACGAG 1 cut(s) 587
BbsI GAAGAC 3 cut(s) 84, 863, 2117
Bbv12I GWGCWC 3 cut(s) 802, 1337, 2247
BbvI GCAGC 4 cut(s) 1086, 1309, 2661, 2691
BccI CCATC 5 cut(s) 188, 496, 1748, 1828, 2060
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BcnI CCSGG 2 cut(s) 906, 2099
BcoDI GTCTC 5 cut(s) 478, 546, 1490, 1752, 2341
BfaI CTAG 8 cut(s) 336, 473, 1524, 1580, 1706, 1904, 1995, 2552
BfmI CTRYAG 4 cut(s) 777, 1434, 1762, 2238
BfoI RGCGCY 1 cut(s) 1378
BfuAI ACCTGC 2 cut(s) 701, 2745
BglII AGATCT 1 cut(s) 2755
BisI GCNGC 4 cut(s) 1100, 1298, 2650, 2705
BlnI CCTAGG 1 cut(s) 1579
BlsI GCNGC 4 cut(s) 1101, 1299, 2651, 2706
BmcAI AGTACT 2 cut(s) 546, 564
Bme1390I CCNGG 2 cut(s) 906, 2099
Bme18I GGWCC 2 cut(s) 902, 2159
BmeRI GACNNNNNGTC 1 cut(s) 2584
BmgT120I GGNCC 3 cut(s) 902, 1872, 2159
BmiI GGNNCC 4 cut(s) 540, 904, 1062, 2379
BmrFI CCNGG 2 cut(s) 906, 2099
BmsI GCATC 8 cut(s) 941, 1325, 1522, 1588, 1965, 2502, 2661, 2853
BmtI GCTAGC 1 cut(s) 339
BpiI GAAGAC 3 cut(s) 84, 863, 2117
Bpu14I TTCGAA 1 cut(s) 1820
BpuEI CTTGAG 4 cut(s) 641, 695, 1955, 2780
BpuMI CCSGG 2 cut(s) 906, 2099
BsaBI GATNNNNATC 1 cut(s) 1171
BsaHI GRCGYC 1 cut(s) 957
BsaJI CCNNGG 2 cut(s) 1320, 1579
Bsc4I CCNNNNNNNGG 3 cut(s) 121, 128, 189
Bse118I RCCGGY 1 cut(s) 404
Bse1I ACTGG 4 cut(s) 542, 904, 1088, 1398
Bse3DI GCAATG 3 cut(s) 209, 588, 1299
Bse8I GATNNNNATC 1 cut(s) 1171
BseDI CCNNGG 2 cut(s) 1320, 1579
BseGI GGATG 7 cut(s) 199, 495, 880, 917, 1156, 1316, 1759
BseJI GATNNNNATC 1 cut(s) 1171
BseLI CCNNNNNNNGG 3 cut(s) 121, 128, 189
BseMI GCAATG 3 cut(s) 209, 588, 1299
BseMII CTCAG 1 cut(s) 594
BseNI ACTGG 4 cut(s) 542, 904, 1088, 1398
BseRI GAGGAG 1 cut(s) 1763
BseSI GKGCMC 1 cut(s) 802
BseXI GCAGC 4 cut(s) 1086, 1309, 2661, 2691
BshFI GGCC 3 cut(s) 1397, 1873, 2070
BshNI GGYRCC 1 cut(s) 1060
BsiHKAI GWGCWC 3 cut(s) 802, 1337, 2247
BsiSI CCGG 4 cut(s) 122, 405, 906, 2099
BslFI GGGAC 4 cut(s) 70, 888, 1675, 2807
BslI CCNNNNNNNGG 3 cut(s) 121, 128, 189
BsmAI GTCTC 5 cut(s) 478, 546, 1490, 1752, 2341
BsmBI CGTCTC 1 cut(s) 478
BsmFI GGGAC 4 cut(s) 70, 888, 1675, 2807
BsmI GAATGC 1 cut(s) 2706
BsnI GGCC 3 cut(s) 1397, 1873, 2070
Bsp119I TTCGAA 1 cut(s) 1820
Bsp1286I GDGCHC 4 cut(s) 802, 1337, 2099, 2247
BspACI CCGC 4 cut(s) 356, 815, 1425, 2491
BspANI GGCC 3 cut(s) 1397, 1873, 2070
BspCNI CTCAG 1 cut(s) 595
BspLI GGNNCC 4 cut(s) 540, 904, 1062, 2379
BspMAI CTGCAG 1 cut(s) 2242
BspMI ACCTGC 2 cut(s) 701, 2745
BspOI GCTAGC 1 cut(s) 339
BspPI GGATC 7 cut(s) 113, 144, 533, 546, 1124, 1174, 1823
BspT104I TTCGAA 1 cut(s) 1820
BspT107I GGYRCC 1 cut(s) 1060
BsrDI GCAATG 3 cut(s) 209, 588, 1299
BsrFI RCCGGY 1 cut(s) 404
BsrI ACTGG 4 cut(s) 542, 904, 1088, 1398
BssAI RCCGGY 1 cut(s) 404
BssECI CCNNGG 2 cut(s) 1320, 1579
BssNI GRCGYC 1 cut(s) 957
BssSI CACGAG 1 cut(s) 587
BssT1I CCWWGG 2 cut(s) 1320, 1579
Bst2BI CACGAG 1 cut(s) 587
Bst4CI ACNGT 8 cut(s) 347, 399, 997, 1405, 1777, 2106, 2141, 2159
Bst6I CTCTTC 1 cut(s) 2684
BstACI GRCGYC 1 cut(s) 957
BstAPI GCANNNNNTGC 1 cut(s) 401
BstBI TTCGAA 1 cut(s) 1820
BstC8I GCNNGC 7 cut(s) 216, 282, 337, 341, 2252, 2306, 2431
BstF5I GGATG 7 cut(s) 199, 495, 880, 917, 1156, 1316, 1759
BstH2I RGCGCY 1 cut(s) 1378
BstHHI GCGC 2 cut(s) 581, 1377
BstMAI GTCTC 5 cut(s) 478, 546, 1490, 1752, 2341
BstMWI GCNNNNNNNGC 6 cut(s) 392, 401, 517, 1879, 1975, 2251
BstNSI RCATGY 1 cut(s) 2180
BstSCI CCNGG 2 cut(s) 904, 2097
BstSFI CTRYAG 4 cut(s) 777, 1434, 1762, 2238
BstSLI GKGCMC 1 cut(s) 802
BstV1I GCAGC 4 cut(s) 1086, 1309, 2661, 2691
BstV2I GAAGAC 3 cut(s) 84, 863, 2117
BstX2I RGATCY 4 cut(s) 118, 538, 1828, 2755
BstXI CCANNNNNNTGG 2 cut(s) 1095, 1405
BstYI RGATCY 4 cut(s) 118, 538, 1828, 2755
BsuRI GGCC 3 cut(s) 1397, 1873, 2070
BtgZI GCGATG 1 cut(s) 2799
BtsCI GGATG 7 cut(s) 199, 495, 880, 917, 1156, 1316, 1759
BtsIMutI CAGTG 7 cut(s) 343, 395, 993, 1095, 1391, 1410, 1773
BveI ACCTGC 2 cut(s) 701, 2745
Cac8I GCNNGC 7 cut(s) 216, 282, 337, 341, 2252, 2306, 2431
CaiI CAGNNNCTG 1 cut(s) 1175
CfoI GCGC 2 cut(s) 581, 1377
Cfr10I RCCGGY 1 cut(s) 404
Cfr13I GGNCC 3 cut(s) 902, 1872, 2159
CseI GACGC 2 cut(s) 401, 1930
CspCI CAANNNNNGTGG 4 cut(s) 212, 247, 570, 605
CviAII CATG 5 cut(s) 352, 743, 1787, 2177, 2497
DraI TTTAAA 1 cut(s) 442
DrdI GACNNNNNNGTC 1 cut(s) 1231
DriI GACNNNNNGTC 1 cut(s) 2584
DseDI GACNNNNNNGTC 1 cut(s) 1231
EaeI YGGCCR 1 cut(s) 1395
Eam1104I CTCTTC 1 cut(s) 2684
Eam1105I GACNNNNNGTC 1 cut(s) 2584
EarI CTCTTC 1 cut(s) 2684
Ecl136II GAGCTC 2 cut(s) 1335, 2245
Eco130I CCWWGG 2 cut(s) 1320, 1579
Eco24I GRGCYC 3 cut(s) 1337, 2099, 2247
Eco47I GGWCC 2 cut(s) 902, 2159
Eco47III AGCGCT 1 cut(s) 1376
Eco53kI GAGCTC 2 cut(s) 1335, 2245
Eco57I CTGAAG 6 cut(s) 1166, 1911, 2213, 2331, 2492, 2547
EcoICRI GAGCTC 2 cut(s) 1335, 2245
EcoRI GAATTC 2 cut(s) 1193, 1856
EcoT14I CCWWGG 2 cut(s) 1320, 1579
EcoT22I ATGCAT 1 cut(s) 1673
EcoT38I GRGCYC 3 cut(s) 1337, 2099, 2247
ErhI CCWWGG 2 cut(s) 1320, 1579
Esp3I CGTCTC 1 cut(s) 478
FaeI CATG 5 cut(s) 355, 746, 1790, 2180, 2500
FalI AAGNNNNNCTT 4 cut(s) 237, 269, 2612, 2644
FaqI GGGAC 4 cut(s) 70, 888, 1675, 2807
FatI CATG 5 cut(s) 351, 742, 1786, 2176, 2496
FblI GTMKAC 2 cut(s) 720, 1267
Fnu4HI GCNGC 4 cut(s) 1100, 1298, 2650, 2705
FokI GGATG 7 cut(s) 206, 502, 887, 924, 1163, 1303, 1766
FriOI GRGCYC 3 cut(s) 1337, 2099, 2247
Fsp4HI GCNGC 4 cut(s) 1100, 1298, 2650, 2705
FspBI CTAG 8 cut(s) 336, 473, 1524, 1580, 1706, 1904, 1995, 2552
GlaI GCGC 2 cut(s) 580, 1376
GluI GCNGC 4 cut(s) 1100, 1298, 2650, 2705
HaeII RGCGCY 1 cut(s) 1378
HaeIII GGCC 3 cut(s) 1397, 1873, 2070
HapII CCGG 4 cut(s) 122, 405, 906, 2099
HgaI GACGC 2 cut(s) 401, 1930
HhaI GCGC 2 cut(s) 581, 1377
Hin1I GRCGYC 1 cut(s) 957
Hin1II CATG 5 cut(s) 355, 746, 1790, 2180, 2500
Hin6I GCGC 2 cut(s) 579, 1375
HinP1I GCGC 2 cut(s) 579, 1375
HindIII AAGCTT 1 cut(s) 216
HpaII CCGG 4 cut(s) 122, 405, 906, 2099
HphI GGTGA 3 cut(s) 2153, 2477, 2693
Hpy166II GTNNAC 6 cut(s) 8, 721, 800, 1268, 1430, 2137
Hpy8I GTNNAC 6 cut(s) 8, 721, 800, 1268, 1430, 2137
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 5 cut(s) 97, 569, 1108, 2188, 2849
HpyCH4III ACNGT 8 cut(s) 347, 399, 997, 1405, 1777, 2106, 2141, 2159
HpyCH4IV ACGT 3 cut(s) 61, 957, 1187
HpyF10VI GCNNNNNNNGC 6 cut(s) 392, 401, 517, 1879, 1975, 2251
HpySE526I ACGT 3 cut(s) 61, 957, 1187
Hsp92I GRCGYC 1 cut(s) 957
Hsp92II CATG 5 cut(s) 355, 746, 1790, 2180, 2500
HspAI GCGC 2 cut(s) 579, 1375
KpnI GGTACC 1 cut(s) 1064
LmnI GCTCC 3 cut(s) 1018, 1837, 2726
Lsp1109I GCAGC 4 cut(s) 1086, 1309, 2661, 2691
LweI GCATC 8 cut(s) 941, 1325, 1522, 1588, 1965, 2502, 2661, 2853
MaeI CTAG 8 cut(s) 336, 473, 1524, 1580, 1706, 1904, 1995, 2552
MaeII ACGT 3 cut(s) 61, 957, 1187
MfeI CAATTG 1 cut(s) 86
MflI RGATCY 4 cut(s) 118, 538, 1828, 2755
MhlI GDGCHC 4 cut(s) 802, 1337, 2099, 2247
MlsI TGGCCA 1 cut(s) 1397
MluNI TGGCCA 1 cut(s) 1397
MlyI GAGTC 6 cut(s) 470, 1089, 2107, 2378, 2572, 2609
MmeI TCCRAC 3 cut(s) 52, 808, 1370
Mox20I TGGCCA 1 cut(s) 1397
Mph1103I ATGCAT 1 cut(s) 1673
MroXI GAANNNNTTC 3 cut(s) 81, 1176, 1506
MscI TGGCCA 1 cut(s) 1397
MslI CAYNNNNRTG 6 cut(s) 192, 1403, 1628, 2463, 2806, 2849
Msp20I TGGCCA 1 cut(s) 1397
MspI CCGG 4 cut(s) 122, 405, 906, 2099
MspR9I CCNGG 2 cut(s) 906, 2099
MunI CAATTG 1 cut(s) 86
Mva1269I GAATGC 1 cut(s) 2706
MwoI GCNNNNNNNGC 6 cut(s) 392, 401, 517, 1879, 1975, 2251
NciI CCSGG 2 cut(s) 906, 2099
NheI GCTAGC 1 cut(s) 335
NlaIII CATG 5 cut(s) 355, 746, 1790, 2180, 2500
NlaIV GGNNCC 4 cut(s) 540, 904, 1062, 2379
NmeAIII GCCGAG 1 cut(s) 2130
NmuCI GTSAC 6 cut(s) 347, 991, 1222, 1716, 1766, 2576
NsiI ATGCAT 1 cut(s) 1673
NspI RCATGY 1 cut(s) 2180
NspV TTCGAA 1 cut(s) 1820
OliI CACNNNNGTG 1 cut(s) 2463
PaqCI CACCTGC 1 cut(s) 701
PciI ACATGT 1 cut(s) 2176
PctI GAATGC 1 cut(s) 2706
PdmI GAANNNNTTC 3 cut(s) 81, 1176, 1506
PfeI GAWTC 8 cut(s) 493, 668, 679, 763, 1172, 1248, 2033, 2144
PfoI TCCNGGA 1 cut(s) 904
PkrI GCNGC 4 cut(s) 1101, 1299, 2651, 2706
PleI GAGTC 6 cut(s) 470, 1088, 2107, 2378, 2571, 2608
PpsI GAGTC 6 cut(s) 470, 1088, 2107, 2378, 2571, 2608
PscI ACATGT 1 cut(s) 2176
Psp124BI GAGCTC 2 cut(s) 1337, 2247
PspN4I GGNNCC 4 cut(s) 540, 904, 1062, 2379
PspPI GGNCC 3 cut(s) 902, 1872, 2159
PstI CTGCAG 1 cut(s) 2242
PstNI CAGNNNCTG 1 cut(s) 1175
PsuI RGATCY 4 cut(s) 118, 538, 1828, 2755
RseI CAYNNNNRTG 6 cut(s) 192, 1403, 1628, 2463, 2806, 2849
SacI GAGCTC 2 cut(s) 1337, 2247
SatI GCNGC 4 cut(s) 1100, 1298, 2650, 2705
Sau96I GGNCC 3 cut(s) 902, 1872, 2159
ScaI AGTACT 2 cut(s) 546, 564
SchI GAGTC 6 cut(s) 470, 1089, 2107, 2378, 2572, 2609
ScrFI CCNGG 2 cut(s) 906, 2099
SduI GDGCHC 4 cut(s) 802, 1337, 2099, 2247
SfaNI GCATC 8 cut(s) 941, 1325, 1522, 1588, 1965, 2502, 2661, 2853
SfcI CTRYAG 4 cut(s) 777, 1434, 1762, 2238
SfuI TTCGAA 1 cut(s) 1820
SinI GGWCC 2 cut(s) 902, 2159
SmiMI CAYNNNNRTG 6 cut(s) 192, 1403, 1628, 2463, 2806, 2849
SmlI CTYRAG 4 cut(s) 656, 674, 1970, 2759
SmoI CTYRAG 4 cut(s) 656, 674, 1970, 2759
SsiI CCGC 4 cut(s) 356, 815, 1425, 2491
SspMI CTAG 8 cut(s) 336, 473, 1524, 1580, 1706, 1904, 1995, 2552
SstI GAGCTC 2 cut(s) 1337, 2247
StyD4I CCNGG 2 cut(s) 904, 2097
StyI CCWWGG 2 cut(s) 1320, 1579
TaaI ACNGT 8 cut(s) 347, 399, 997, 1405, 1777, 2106, 2141, 2159
TaiI ACGT 3 cut(s) 64, 960, 1190
TatI WGTACW 4 cut(s) 544, 562, 633, 892
TfiI GAWTC 8 cut(s) 493, 668, 679, 763, 1172, 1248, 2033, 2144
TscAI CASTG 7 cut(s) 350, 402, 1000, 1095, 1398, 1410, 1780
TseFI GTSAC 6 cut(s) 347, 991, 1222, 1716, 1766, 2576
TseI GCWGC 4 cut(s) 1099, 1297, 2649, 2704
Tsp45I GTSAC 6 cut(s) 347, 991, 1222, 1716, 1766, 2576
TspGWI ACGGA 3 cut(s) 149, 502, 875
TspRI CASTG 7 cut(s) 350, 402, 1000, 1095, 1398, 1410, 1780
VneI GTGCAC 1 cut(s) 798
VpaK11BI GGWCC 2 cut(s) 902, 2159
XapI RAATTY 9 cut(s) 968, 1193, 1238, 1856, 1912, 1990, 2231, 2412, 2539
XbaI TCTAGA 1 cut(s) 2551
XceI RCATGY 1 cut(s) 2180
XcmI CCANNNNNNNNNTGG 1 cut(s) 1405
XmaJI CCTAGG 1 cut(s) 1579
XmiI GTMKAC 2 cut(s) 720, 1267
XmnI GAANNNNTTC 3 cut(s) 81, 1176, 1506
XspI CTAG 8 cut(s) 336, 473, 1524, 1580, 1706, 1904, 1995, 2552
ZraI GACGTC 1 cut(s) 958
ZrmI AGTACT 2 cut(s) 546, 564
Zsp2I ATGCAT 1 cut(s) 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.