Rorug02G0636500

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
74989635 .. 74991836
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0636500.1

Sequence Viewer

Length: 840 bp
ATGGGAAGCAACCAAGCCGCCGTGTCCTTCCTCACCAACCTCGCACGCGCCGCCTTCGGCCTCGGCGCCGGCGCCACAATCGTCAACTCCGCCCTCTACACCGTCGACGGCGGCCAGCGCGCCGTCCTCTTCGACCGTTTCCGCGGCGTCATCGACGAAACCGTCGGCGAAGGCACCCACTTCCTGATCCCATGGCTCCAGAAGCCCTACATCTTCGACATCAGGACCCGCCCCCACACCTTCTCCTCCATCTCCGGCACCAAGGACCTCCAGATGGTCAACCTCACTCTTAGGGTTCTCTCCCGCCCCGAGGTCAGTCGCCTCCCTCAGATCTTCAAAACCCTGGGGCTCGAGTACGACGAGAAGGTCCTCCCCTCGATCGGGAACGAGGTTCTCAAGGCGGTGGTGGCGCAGTTCAACGCCGATCAGCTCCTGACGGAGCGGCCGCACGTGTCGGCGCTGGTGCGGGAGAGCTTGATCCGCAGGGCTAAGGATTTCAACATTGAGCTGGACGACGTGGCCATCACGCACTTGTCGTACGGGGCGGAGTTCTCACGCGCCGTCGAGCAGAAGCAGGTGGCGCAGCAGGAGGCGGAGCGCTCCAAGTTTGTTGTGGCGAAGGCGGAGCAGGAGAGGAGGGCTGCTATTATCAGGGCTCAGGGTGAGAGTGAATCTGCTAAGCTGATTTCTGAGGCGACTGCCGCTGCCGGAAGTGACTTGATTGAACTTAGGAGGATAGAGGCCAGTCGAGAGATTGCCGCCACGCTCGCCAAGTCGCCGAATGTCAACTACCTGCCTAAGGGGAACCAGGTCCTCTTCGGCCTCGGTGGTGGTCGTTGA

Protein Analysis

279

Amino Acids

30.53

Weight (kDa)

8.8

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 34 - 211 2.6e-29 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 565
AasI GACNNNNNNGTC 2 cut(s) 161, 365
Acc36I ACCTGC 2 cut(s) 565, 801
AccB1I GGYRCC 4 cut(s) 65, 71, 173, 257
AccBSI CCGCTC 1 cut(s) 442
AccI GTMKAC 1 cut(s) 105
AccII CGCG 4 cut(s) 48, 120, 144, 558
AclWI GGATC 2 cut(s) 181, 472
AcoI YGGCCR 3 cut(s) 112, 443, 519
AcvI CACGTG 1 cut(s) 451
AcyI GRCGYC 3 cut(s) 66, 72, 147
AfaI GTAC 2 cut(s) 356, 539
AfeI AGCGCT 1 cut(s) 599
AfiI CCNNNNNNNGG 5 cut(s) 274, 310, 380, 381, 799
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 4 cut(s) 337, 418, 499, 725
AjiI CACGTC 1 cut(s) 517
AjnI CCWGG 2 cut(s) 342, 807
AluBI AGCT 4 cut(s) 430, 474, 508, 682
AluI AGCT 4 cut(s) 430, 474, 508, 682
AlwI GGATC 2 cut(s) 181, 472
AlwNI CAGNNNCTG 1 cut(s) 433
Ama87I CYCGRG 2 cut(s) 308, 350
Aor51HI AGCGCT 1 cut(s) 599
AoxI GGCC 6 cut(s) 58, 112, 443, 519, 741, 820
ApeKI GCWGC 3 cut(s) 583, 641, 704
AspS9I GGNCC 4 cut(s) 225, 265, 367, 811
AsuHPI GGTGA 2 cut(s) 25, 674
AvaI CYCGRG 2 cut(s) 308, 350
AvaII GGWCC 4 cut(s) 225, 265, 367, 811
AxyI CCTNAGG 1 cut(s) 798
BalI TGGCCA 1 cut(s) 521
BanI GGYRCC 4 cut(s) 65, 71, 173, 257
BanII GRGCYC 2 cut(s) 351, 658
BbrPI CACGTG 1 cut(s) 451
BbvI GCAGC 3 cut(s) 595, 628, 691
BccI CCATC 3 cut(s) 257, 268, 530
BceAI ACGGC 4 cut(s) 5, 107, 124, 545
BciT130I CCWGG 2 cut(s) 344, 809
BfoI RGCGCY 4 cut(s) 69, 75, 461, 601
BfuAI ACCTGC 2 cut(s) 565, 801
BglII AGATCT 1 cut(s) 330
BlpI GCTNAGC 1 cut(s) 678
Bme1390I CCNGG 2 cut(s) 344, 809
Bme18I GGWCC 4 cut(s) 225, 265, 367, 811
BmeT110I CYCGRG 2 cut(s) 308, 350
BmgBI CACGTC 1 cut(s) 517
BmgT120I GGNCC 4 cut(s) 225, 265, 367, 811
BmiI GGNNCC 7 cut(s) 67, 73, 175, 197, 227, 259, 806
BmrFI CCNGG 2 cut(s) 344, 809
BpmI CTGGAG 2 cut(s) 182, 254
Bpu10I CCTNAGC 2 cut(s) 489, 657
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 1 cut(s) 380
BsaAI YACGTR 1 cut(s) 451
BsaHI GRCGYC 3 cut(s) 66, 72, 147
BsaJI CCNNGG 8 cut(s) 61, 142, 191, 261, 309, 342, 343, 823
BsaXI ACNNNNNCTCC 2 cut(s) 227, 257
Bsc4I CCNNNNNNNGG 5 cut(s) 274, 310, 380, 381, 799
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 744
Bse21I CCTNAGG 1 cut(s) 798
BseBI CCWGG 2 cut(s) 344, 809
BseDI CCNNGG 8 cut(s) 61, 142, 191, 261, 309, 342, 343, 823
BseLI CCNNNNNNNGG 5 cut(s) 274, 310, 380, 381, 799
BseMII CTCAG 3 cut(s) 341, 671, 681
BseNI ACTGG 1 cut(s) 744
BsePI GCGCGC 1 cut(s) 118
BseRI GAGGAG 2 cut(s) 235, 649
BseX3I CGGCCG 1 cut(s) 443
BseXI GCAGC 3 cut(s) 595, 628, 691
Bsh1236I CGCG 4 cut(s) 48, 120, 144, 558
Bsh1285I CGRYCG 3 cut(s) 136, 381, 446
BshFI GGCC 6 cut(s) 60, 114, 445, 521, 743, 822
BshNI GGYRCC 4 cut(s) 65, 71, 173, 257
BsiEI CGRYCG 3 cut(s) 136, 381, 446
BsiHKCI CYCGRG 2 cut(s) 308, 350
BsiSI CCGG 3 cut(s) 69, 255, 708
BsiWI CGTACG 1 cut(s) 537
BslI CCNNNNNNNGG 5 cut(s) 274, 310, 380, 381, 799
BsnI GGCC 6 cut(s) 60, 114, 445, 521, 743, 822
BsoBI CYCGRG 2 cut(s) 308, 350
Bsp1286I GDGCHC 2 cut(s) 351, 658
Bsp143I GATC 5 cut(s) 186, 330, 378, 424, 477
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 191
BspANI GGCC 6 cut(s) 60, 114, 445, 521, 743, 822
BspCNI CTCAG 3 cut(s) 340, 670, 682
BspFNI CGCG 4 cut(s) 48, 120, 144, 558
BspLI GGNNCC 7 cut(s) 67, 73, 175, 197, 227, 259, 806
BspMI ACCTGC 2 cut(s) 565, 801
BspPI GGATC 2 cut(s) 181, 472
BspT107I GGYRCC 4 cut(s) 65, 71, 173, 257
BsrBI CCGCTC 1 cut(s) 442
BsrFI RCCGGY 1 cut(s) 68
BsrI ACTGG 1 cut(s) 744
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 8 cut(s) 61, 142, 191, 261, 309, 342, 343, 823
BssHII GCGCGC 1 cut(s) 118
BssMI GATC 5 cut(s) 186, 330, 378, 424, 477
BssNI GRCGYC 3 cut(s) 66, 72, 147
BssT1I CCWWGG 2 cut(s) 191, 261
Bst2UI CCWGG 2 cut(s) 344, 809
Bst4CI ACNGT 3 cut(s) 103, 137, 163
Bst6I CTCTTC 2 cut(s) 134, 821
BstACI GRCGYC 3 cut(s) 66, 72, 147
BstBAI YACGTR 1 cut(s) 451
BstC8I GCNNGC 5 cut(s) 46, 70, 116, 120, 768
BstDEI CTNAG 8 cut(s) 290, 327, 489, 657, 678, 690, 728, 798
BstDSI CCRYGG 2 cut(s) 142, 191
BstENI CCTNNNNNAGG 1 cut(s) 797
BstFNI CGCG 4 cut(s) 48, 120, 144, 558
BstH2I RGCGCY 4 cut(s) 69, 75, 461, 601
BstKTI GATC 5 cut(s) 189, 333, 381, 427, 480
BstMBI GATC 5 cut(s) 186, 330, 378, 424, 477
BstMCI CGRYCG 3 cut(s) 136, 381, 446
BstMWI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
BstNI CCWGG 2 cut(s) 344, 809
BstSCI CCNGG 2 cut(s) 342, 807
BstUI CGCG 4 cut(s) 48, 120, 144, 558
BstV1I GCAGC 3 cut(s) 595, 628, 691
BstX2I RGATCY 1 cut(s) 330
BstYI RGATCY 1 cut(s) 330
BstZI CGGCCG 1 cut(s) 443
Bsu36I CCTNAGG 1 cut(s) 798
BsuRI GGCC 6 cut(s) 60, 114, 445, 521, 743, 822
BtgI CCRYGG 2 cut(s) 142, 191
BtrI CACGTC 1 cut(s) 517
BveI ACCTGC 2 cut(s) 565, 801
Cac8I GCNNGC 5 cut(s) 46, 70, 116, 120, 768
CaiI CAGNNNCTG 1 cut(s) 433
CciNI GCGGCCGC 1 cut(s) 443
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 4 cut(s) 225, 265, 367, 811
Cfr42I CCGCGG 1 cut(s) 145
CseI GACGC 1 cut(s) 136
CsiI ACCWGGT 1 cut(s) 807
Csp6I GTAC 2 cut(s) 355, 538
CviAII CATG 1 cut(s) 192
CviQI GTAC 2 cut(s) 355, 538
DdeI CTNAG 8 cut(s) 290, 327, 489, 657, 678, 690, 728, 798
DinI GGCGCC 2 cut(s) 67, 73
DpnI GATC 5 cut(s) 188, 332, 380, 426, 479
DpnII GATC 5 cut(s) 186, 330, 378, 424, 477
DrdI GACNNNNNNGTC 2 cut(s) 161, 365
DseDI GACNNNNNNGTC 2 cut(s) 161, 365
EaeI YGGCCR 3 cut(s) 112, 443, 519
EagI CGGCCG 1 cut(s) 443
Eam1104I CTCTTC 2 cut(s) 134, 821
EarI CTCTTC 2 cut(s) 134, 821
EciI GGCGGA 4 cut(s) 79, 560, 608, 638
EclXI CGGCCG 1 cut(s) 443
Eco130I CCWWGG 2 cut(s) 191, 261
Eco24I GRGCYC 2 cut(s) 351, 658
Eco47I GGWCC 4 cut(s) 225, 265, 367, 811
Eco47III AGCGCT 1 cut(s) 599
Eco52I CGGCCG 1 cut(s) 443
Eco72I CACGTG 1 cut(s) 451
Eco81I CCTNAGG 1 cut(s) 798
Eco88I CYCGRG 2 cut(s) 308, 350
EcoNI CCTNNNNNAGG 1 cut(s) 797
EcoO109I RGGNCCY 4 cut(s) 225, 265, 367, 811
EcoRII CCWGG 2 cut(s) 342, 807
EcoT14I CCWWGG 2 cut(s) 191, 261
EcoT38I GRGCYC 2 cut(s) 351, 658
EgeI GGCGCC 2 cut(s) 67, 73
EheI GGCGCC 2 cut(s) 67, 73
ErhI CCWWGG 2 cut(s) 191, 261
FaeI CATG 1 cut(s) 195
FaiI YATR 1 cut(s) 193
FatI CATG 1 cut(s) 191
FauI CCCGC 3 cut(s) 236, 311, 459
FblI GTMKAC 1 cut(s) 105
FriOI GRGCYC 2 cut(s) 351, 658
GsuI CTGGAG 2 cut(s) 182, 254
HaeII RGCGCY 4 cut(s) 69, 75, 461, 601
HaeIII GGCC 6 cut(s) 60, 114, 445, 521, 743, 822
HapII CCGG 3 cut(s) 69, 255, 708
HgaI GACGC 1 cut(s) 136
Hin1I GRCGYC 3 cut(s) 66, 72, 147
Hin1II CATG 1 cut(s) 195
HincII GTYRAC 4 cut(s) 85, 106, 280, 787
HindII GTYRAC 4 cut(s) 85, 106, 280, 787
HinfI GANTC 1 cut(s) 671
HpaII CCGG 3 cut(s) 69, 255, 708
HphI GGTGA 2 cut(s) 25, 674
Hpy166II GTNNAC 4 cut(s) 85, 106, 280, 787
Hpy188I TCNGA 2 cut(s) 330, 691
Hpy188III TCNNGA 7 cut(s) 184, 199, 223, 271, 382, 433, 749
Hpy8I GTNNAC 4 cut(s) 85, 106, 280, 787
Hpy99I CGWCG 7 cut(s) 107, 110, 158, 167, 362, 518, 566
HpyAV CCTTC 6 cut(s) 37, 64, 164, 250, 358, 613
HpyCH4III ACNGT 3 cut(s) 103, 137, 163
HpyCH4IV ACGT 2 cut(s) 450, 516
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
HpyF3I CTNAG 8 cut(s) 290, 327, 489, 657, 678, 690, 728, 798
HpySE526I ACGT 2 cut(s) 450, 516
Hsp92I GRCGYC 3 cut(s) 66, 72, 147
Hsp92II CATG 1 cut(s) 195
KasI GGCGCC 2 cut(s) 65, 71
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
KspI CCGCGG 1 cut(s) 145
Kzo9I GATC 5 cut(s) 186, 330, 378, 424, 477
LmnI GCTCC 6 cut(s) 201, 435, 439, 595, 605, 625
Lsp1109I GCAGC 3 cut(s) 595, 628, 691
MabI ACCWGGT 1 cut(s) 807
MaeII ACGT 2 cut(s) 450, 516
MaeIII GTNAC 1 cut(s) 713
MalI GATC 5 cut(s) 188, 332, 380, 426, 479
MbiI CCGCTC 1 cut(s) 442
MboI GATC 5 cut(s) 186, 330, 378, 424, 477
MboII GAAGA 4 cut(s) 121, 205, 325, 808
MflI RGATCY 1 cut(s) 330
MhlI GDGCHC 2 cut(s) 351, 658
MlsI TGGCCA 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 521
Mly113I GGCGCC 2 cut(s) 66, 72
Mox20I TGGCCA 1 cut(s) 521
MreI CGCCGGCG 1 cut(s) 68
MroNI GCCGGC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 521
Msp20I TGGCCA 1 cut(s) 521
MspA1I CMGCKG 2 cut(s) 144, 704
MspI CCGG 3 cut(s) 69, 255, 708
MspR9I CCNGG 2 cut(s) 344, 809
MvaI CCWGG 2 cut(s) 344, 809
MvnI CGCG 4 cut(s) 48, 120, 144, 558
MwoI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
NaeI GCCGGC 1 cut(s) 70
NarI GGCGCC 2 cut(s) 66, 72
NcoI CCATGG 1 cut(s) 191
NdeII GATC 5 cut(s) 186, 330, 378, 424, 477
NgoMIV GCCGGC 1 cut(s) 68
NlaIII CATG 1 cut(s) 195
NlaIV GGNNCC 7 cut(s) 67, 73, 175, 197, 227, 259, 806
NmeAIII GCCGAG 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 713
NotI GCGGCCGC 1 cut(s) 443
PaeR7I CTCGAG 1 cut(s) 350
PaqCI CACCTGC 1 cut(s) 565
PasI CCCWGGG 1 cut(s) 343
PauI GCGCGC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 3 cut(s) 159, 357, 533
PdiI GCCGGC 1 cut(s) 70
PfeI GAWTC 1 cut(s) 671
Pfl23II CGTACG 1 cut(s) 537
Ple19I CGATCG 1 cut(s) 381
PluTI GGCGCC 2 cut(s) 69, 75
PmaCI CACGTG 1 cut(s) 451
PmlI CACGTG 1 cut(s) 451
Ppu21I YACGTR 1 cut(s) 451
PpuMI RGGWCCY 4 cut(s) 225, 265, 367, 811
Psp5II RGGWCCY 4 cut(s) 225, 265, 367, 811
Psp6I CCWGG 2 cut(s) 342, 807
PspCI CACGTG 1 cut(s) 451
PspGI CCWGG 2 cut(s) 342, 807
PspLI CGTACG 1 cut(s) 537
PspN4I GGNNCC 7 cut(s) 67, 73, 175, 197, 227, 259, 806
PspPI GGNCC 4 cut(s) 225, 265, 367, 811
PspPPI RGGWCCY 4 cut(s) 225, 265, 367, 811
PspXI VCTCGAGB 1 cut(s) 350
PstNI CAGNNNCTG 1 cut(s) 433
PsuI RGATCY 1 cut(s) 330
PteI GCGCGC 1 cut(s) 118
PvuI CGATCG 1 cut(s) 381
RsaI GTAC 2 cut(s) 356, 539
RsaNI GTAC 2 cut(s) 355, 538
SacII CCGCGG 1 cut(s) 145
SalI GTCGAC 1 cut(s) 104
Sau3AI GATC 5 cut(s) 186, 330, 378, 424, 477
Sau96I GGNCC 4 cut(s) 225, 265, 367, 811
ScrFI CCNGG 2 cut(s) 344, 809
SduI GDGCHC 2 cut(s) 351, 658
SexAI ACCWGGT 1 cut(s) 807
SfoI GGCGCC 2 cut(s) 67, 73
Sfr274I CTCGAG 1 cut(s) 350
Sfr303I CCGCGG 1 cut(s) 145
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 145
SgrDI CGTCGACG 1 cut(s) 104
SinI GGWCC 4 cut(s) 225, 265, 367, 811
SlaI CTCGAG 1 cut(s) 350
SmlI CTYRAG 2 cut(s) 350, 395
SmoI CTYRAG 2 cut(s) 350, 395
SspDI GGCGCC 2 cut(s) 65, 71
StyD4I CCNGG 2 cut(s) 342, 807
StyI CCWWGG 2 cut(s) 191, 261
TaaI ACNGT 3 cut(s) 103, 137, 163
TaiI ACGT 2 cut(s) 453, 519
TaqI TCGA 8 cut(s) 105, 132, 153, 216, 351, 377, 564, 748
TauI GCSGC 8 cut(s) 20, 53, 114, 147, 445, 448, 704, 761
TfiI GAWTC 1 cut(s) 671
TseFI GTSAC 1 cut(s) 713
TseI GCWGC 3 cut(s) 583, 641, 704
Tsp45I GTSAC 1 cut(s) 713
TspGWI ACGGA 1 cut(s) 452
VpaK11BI GGWCC 4 cut(s) 225, 265, 367, 811
XagI CCTNNNNNAGG 1 cut(s) 797
XcmI CCANNNNNNNNNTGG 1 cut(s) 610
XhoI CTCGAG 1 cut(s) 350
XmiI GTMKAC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.