Rh3DG038400

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
2552428 .. 2552640
213 bp
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UTR
Exon/CDS
Intron
Rh3DG038400.1

Sequence Viewer

Length: 213 bp
ATGGCCGATTCAACCAAACCCACCACCGCCGTCGCCACCGCGAAGCCCTACAACCCCTACCAAGACCTCGACGCTCCGATCAAGAGGCTCTACTACCTCCCAACCTCGCCGGAGCACCTCTATCCCGAAAAAGCTCCAAAACCCTACCGTCCCTTTGGAGACAACCTCGTGAGTTGCACCGGCATTTGCTACCTCTCCGGCCGGACCGCCTGA

Protein Analysis

70

Amino Acids

7.77

Weight (kDa)

8.6

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 41
AciI CCGC 3 cut(s) 27, 39, 207
AcoI YGGCCR 2 cut(s) 3, 199
AgsI TTSAA 1 cut(s) 12
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
Alw21I GWGCWC 1 cut(s) 117
Alw26I GTCTC 1 cut(s) 153
AoxI GGCC 2 cut(s) 3, 199
AspS9I GGNCC 1 cut(s) 204
AvaII GGWCC 1 cut(s) 204
BauI CACGAG 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 14
BcoDI GTCTC 1 cut(s) 153
Bme18I GGWCC 1 cut(s) 204
BmgT120I GGNCC 1 cut(s) 204
BplI GAGNNNNNCTC 2 cut(s) 150, 182
Bse118I RCCGGY 1 cut(s) 179
BseX3I CGGCCG 1 cut(s) 199
Bsh1236I CGCG 1 cut(s) 41
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 2 cut(s) 5, 201
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 117
BsiSI CCGG 4 cut(s) 110, 180, 198, 202
BslFI GGGAC 1 cut(s) 135
BsmAI GTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 135
BsnI GGCC 2 cut(s) 5, 201
Bsp1286I GDGCHC 1 cut(s) 117
Bsp143I GATC 1 cut(s) 78
BspACI CCGC 3 cut(s) 27, 39, 207
BspANI GGCC 2 cut(s) 5, 201
BspFNI CGCG 1 cut(s) 41
BsrFI RCCGGY 1 cut(s) 179
BssAI RCCGGY 1 cut(s) 179
BssMI GATC 1 cut(s) 78
BssSI CACGAG 1 cut(s) 167
Bst2BI CACGAG 1 cut(s) 167
Bst4CI ACNGT 1 cut(s) 149
BstFNI CGCG 1 cut(s) 41
BstKTI GATC 1 cut(s) 81
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 1 cut(s) 78
BstMCI CGRYCG 1 cut(s) 202
BstUI CGCG 1 cut(s) 41
BstZI CGGCCG 1 cut(s) 199
BsuRI GGCC 2 cut(s) 5, 201
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 1 cut(s) 204
CpoI CGGWCCG 1 cut(s) 204
CseI GACGC 1 cut(s) 80
CspI CGGWCCG 1 cut(s) 204
CviJI RGCY 5 cut(s) 5, 46, 88, 134, 201
CviKI_1 RGCY 5 cut(s) 5, 46, 88, 134, 201
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
EaeI YGGCCR 2 cut(s) 3, 199
EagI CGGCCG 1 cut(s) 199
EclXI CGGCCG 1 cut(s) 199
Eco47I GGWCC 1 cut(s) 204
Eco52I CGGCCG 1 cut(s) 199
FaqI GGGAC 1 cut(s) 135
HaeIII GGCC 2 cut(s) 5, 201
HapII CCGG 4 cut(s) 110, 180, 198, 202
HgaI GACGC 1 cut(s) 80
HinfI GANTC 1 cut(s) 8
HpaII CCGG 4 cut(s) 110, 180, 198, 202
Hpy188I TCNGA 1 cut(s) 78
Hpy188III TCNNGA 3 cut(s) 82, 125, 169
Hpy99I CGWCG 2 cut(s) 35, 74
HpyCH4III ACNGT 1 cut(s) 149
HpyCH4V TGCA 1 cut(s) 177
Kzo9I GATC 1 cut(s) 78
LmnI GCTCC 3 cut(s) 79, 112, 139
LpnPI CCDG 2 cut(s) 123, 193
MalI GATC 1 cut(s) 80
MboI GATC 1 cut(s) 78
MhlI GDGCHC 1 cut(s) 117
MnlI CCTC 7 cut(s) 77, 78, 107, 115, 128, 176, 203
MspI CCGG 4 cut(s) 110, 180, 198, 202
MvnI CGCG 1 cut(s) 41
NdeII GATC 1 cut(s) 78
PfeI GAWTC 1 cut(s) 8
PspPI GGNCC 1 cut(s) 204
Rsr2I CGGWCCG 1 cut(s) 204
RsrII CGGWCCG 1 cut(s) 204
Sau3AI GATC 1 cut(s) 78
Sau96I GGNCC 1 cut(s) 204
SduI GDGCHC 1 cut(s) 117
SetI ASST 7 cut(s) 69, 99, 107, 120, 136, 168, 195
SinI GGWCC 1 cut(s) 204
SsiI CCGC 3 cut(s) 27, 39, 207
TaaI ACNGT 1 cut(s) 149
TaqI TCGA 1 cut(s) 69
TfiI GAWTC 1 cut(s) 8
VpaK11BI GGWCC 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.