No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08780 AT3G08780 |
| fragaria_vesca | FvH4_6g10650 FvH4_6g10650 FvH4_6g10650 FvH4_6g10650 |
| malus_domestica | MD04G1166100.v1.1 MD04G1166200.v1.1 |
| prunus_persica | Prupe.6G284500_v2.0.a1 |
| pyrus_communis | pycom04g14770 |
| rosa_chinensis | RchiOBHm_Chr3g0461671 |
| rosa_laevigata | RLG00000024906 RLG00000024907 |
| rosa_multiflora | Rmu_sc0012406.1_g000006 Rmu_sc0038320.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00332550 Rroxscaffold_6G00418050 |
| rosa_rugosa | Rorug03G0052800 Rorug03G0052900 Rorug03G0053000 Rorug03G0053000 |
| rosa_samantha | Rh3BG114100 Rh3CG116200 Rh3DG116000 |
| rosa_wichuraiana | Rw3G009400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 12 |
| AciI | CCGC | 3 cut(s) | 7, 10, 106 |
| AclWI | GGATC | 1 cut(s) | 290 |
| AcyI | GRCGYC | 1 cut(s) | 265 |
| AgsI | TTSAA | 1 cut(s) | 97 |
| AluBI | AGCT | 1 cut(s) | 146 |
| AluI | AGCT | 1 cut(s) | 146 |
| Alw26I | GTCTC | 1 cut(s) | 278 |
| AlwI | GGATC | 1 cut(s) | 290 |
| ApeKI | GCWGC | 1 cut(s) | 64 |
| AsuII | TTCGAA | 1 cut(s) | 237 |
| BbsI | GAAGAC | 1 cut(s) | 332 |
| BbvI | GCAGC | 1 cut(s) | 51 |
| BccI | CCATC | 2 cut(s) | 127, 243 |
| BceAI | ACGGC | 1 cut(s) | 137 |
| BcoDI | GTCTC | 1 cut(s) | 278 |
| BisI | GCNGC | 3 cut(s) | 10, 65, 106 |
| BlsI | GCNGC | 3 cut(s) | 11, 66, 107 |
| BpiI | GAAGAC | 1 cut(s) | 332 |
| Bpu14I | TTCGAA | 1 cut(s) | 237 |
| Bsa29I | ATCGAT | 1 cut(s) | 349 |
| BsaHI | GRCGYC | 1 cut(s) | 265 |
| Bse118I | RCCGGY | 1 cut(s) | 189 |
| BseCI | ATCGAT | 1 cut(s) | 349 |
| BseGI | GGATG | 1 cut(s) | 318 |
| BseXI | GCAGC | 1 cut(s) | 51 |
| Bsh1236I | CGCG | 1 cut(s) | 12 |
| BshVI | ATCGAT | 1 cut(s) | 349 |
| BsiSI | CCGG | 1 cut(s) | 190 |
| BsmAI | GTCTC | 1 cut(s) | 278 |
| BsmBI | CGTCTC | 1 cut(s) | 278 |
| Bsp119I | TTCGAA | 1 cut(s) | 237 |
| Bsp143I | GATC | 3 cut(s) | 3, 211, 295 |
| BspACI | CCGC | 3 cut(s) | 7, 10, 106 |
| BspDI | ATCGAT | 1 cut(s) | 349 |
| BspFNI | CGCG | 1 cut(s) | 12 |
| BspPI | GGATC | 1 cut(s) | 290 |
| BspT104I | TTCGAA | 1 cut(s) | 237 |
| BsrFI | RCCGGY | 1 cut(s) | 189 |
| BssAI | RCCGGY | 1 cut(s) | 189 |
| BssMI | GATC | 3 cut(s) | 3, 211, 295 |
| BssNI | GRCGYC | 1 cut(s) | 265 |
| BstACI | GRCGYC | 1 cut(s) | 265 |
| BstBI | TTCGAA | 1 cut(s) | 237 |
| BstEII | GGTNACC | 1 cut(s) | 185 |
| BstF5I | GGATG | 1 cut(s) | 318 |
| BstFNI | CGCG | 1 cut(s) | 12 |
| BstKTI | GATC | 3 cut(s) | 6, 214, 298 |
| BstMAI | GTCTC | 1 cut(s) | 278 |
| BstMBI | GATC | 3 cut(s) | 3, 211, 295 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 262 |
| BstPI | GGTNACC | 1 cut(s) | 185 |
| BstUI | CGCG | 1 cut(s) | 12 |
| BstV1I | GCAGC | 1 cut(s) | 51 |
| BstV2I | GAAGAC | 1 cut(s) | 332 |
| Bsu15I | ATCGAT | 1 cut(s) | 349 |
| BsuTUI | ATCGAT | 1 cut(s) | 349 |
| BtsCI | GGATG | 1 cut(s) | 318 |
| Cfr10I | RCCGGY | 1 cut(s) | 189 |
| ClaI | ATCGAT | 1 cut(s) | 349 |
| CseI | GACGC | 1 cut(s) | 254 |
| CviJI | RGCY | 2 cut(s) | 105, 146 |
| CviKI_1 | RGCY | 2 cut(s) | 105, 146 |
| DpnI | GATC | 3 cut(s) | 5, 213, 297 |
| DpnII | GATC | 3 cut(s) | 3, 211, 295 |
| Eco91I | GGTNACC | 1 cut(s) | 185 |
| EcoO65I | GGTNACC | 1 cut(s) | 185 |
| Esp3I | CGTCTC | 1 cut(s) | 278 |
| FaiI | YATR | 1 cut(s) | 333 |
| Fnu4HI | GCNGC | 3 cut(s) | 10, 65, 106 |
| FokI | GGATG | 1 cut(s) | 305 |
| Fsp4HI | GCNGC | 3 cut(s) | 10, 65, 106 |
| GluI | GCNGC | 3 cut(s) | 10, 65, 106 |
| HapII | CCGG | 1 cut(s) | 190 |
| HgaI | GACGC | 1 cut(s) | 254 |
| Hin1I | GRCGYC | 1 cut(s) | 265 |
| HpaII | CCGG | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 2 cut(s) | 314, 322 |
| HpyCH4IV | ACGT | 1 cut(s) | 287 |
| HpyCH4V | TGCA | 1 cut(s) | 201 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 262 |
| HpySE526I | ACGT | 1 cut(s) | 287 |
| Hsp92I | GRCGYC | 1 cut(s) | 265 |
| Kzo9I | GATC | 3 cut(s) | 3, 211, 295 |
| LpnPI | CCDG | 6 cut(s) | 104, 200, 203, 247, 327, 335 |
| Lsp1109I | GCAGC | 1 cut(s) | 51 |
| MaeII | ACGT | 1 cut(s) | 287 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 3 cut(s) | 5, 213, 297 |
| MboI | GATC | 3 cut(s) | 3, 211, 295 |
| MboII | GAAGA | 1 cut(s) | 337 |
| MfeI | CAATTG | 2 cut(s) | 20, 75 |
| MluCI | AATT | 3 cut(s) | 20, 75, 269 |
| MnlI | CCTC | 2 cut(s) | 246, 309 |
| MseI | TTAA | 1 cut(s) | 243 |
| MspI | CCGG | 1 cut(s) | 190 |
| MunI | CAATTG | 2 cut(s) | 20, 75 |
| MvnI | CGCG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 262 |
| NdeII | GATC | 3 cut(s) | 3, 211, 295 |
| NspV | TTCGAA | 1 cut(s) | 237 |
| PkrI | GCNGC | 3 cut(s) | 11, 66, 107 |
| PspEI | GGTNACC | 1 cut(s) | 185 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| SatI | GCNGC | 3 cut(s) | 10, 65, 106 |
| Sau3AI | GATC | 3 cut(s) | 3, 211, 295 |
| SetI | ASST | 3 cut(s) | 148, 290, 346 |
| SfuI | TTCGAA | 1 cut(s) | 237 |
| Sse9I | AATT | 3 cut(s) | 20, 75, 269 |
| SsiI | CCGC | 3 cut(s) | 7, 10, 106 |
| TaiI | ACGT | 1 cut(s) | 290 |
| TaqI | TCGA | 2 cut(s) | 237, 349 |
| TasI | AATT | 3 cut(s) | 20, 75, 269 |
| TauI | GCSGC | 2 cut(s) | 12, 108 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TseI | GCWGC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 1 cut(s) | 280 |