Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0010282

Physical Location & Seq

Genomic Coordinates Forward (+)

12272284 .. 12274531

Gene Structure 2248 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0149000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGCCGACCAAAGGGATGAGGAGCCTCCTCTTTCACCACAAGGCCCCGTCTTTCTCTAGAAATTCTTCACCCTCAAGGTCCTCCATTTCATTCCCCACTCCTCGCCGTAACCCTAGTGCCGGCCTTGACTTCTCAGACGCGATGATCGAGGAGGTCATCGGAAACTTCGCCGTTTTGGCGATCAAATGGGACCCGGAGGCCTCCGGATACGCGAAAGTAACCTCCATGTTCTACGAGAGCAAAACGGAAGCTCACCAGTTCATCAAGTCCGTGAACGACCTCCAGAAGGTCATGCATTACTTGGTCGGGGAGGACCCCACCTCCGAAAAACTCGTCCACGGCCACAGCCTCATGCAGATCGCCATGAAGCGGTTACAGAAGGAGTTCTACCAGATTCTCTCCACGAACCGGGCTCACCTCGACCCGGAATCGGTCTCGACCCGGTCCAGGTCTTCCCGCGTTTCCGTCAGCACTTCTGACGACGAAATCGACGACGGAGCCTTAACAGACGAAGATGTACGCTTCGCCGGAGAATCCCTCTCCGACGTTGAACAAGTCTCCTTTGTTGCCATGGCCGACCTGAGGTCCATCGCCGAATGCATGATCTCCTCCGGCTACGCCAAGGAGTGCGTTCACATATACAAAATCATCAGAAAATCGATAATCGACGAAGGAATGTATAAGCTCGGAGTGGAGAAATTCGCCTCTTCTCGGATCCATAAGATCGACAAAGAGGTCCTCGATCTCAGAATCAAGAACTGGCTGAATGCGGTGAAGGTGGCCACGACCACGCTATTCAACGGAGAGAAGATCCTCTGCGACACCGTTTTCGCCGTCTCCAACTCAATCAGAGAGTCTTGCTTCTCTCACATCGCCAAAGAAGCCGCCACTCTTCTCTTCGAATTTCCTCAAATCCTCGTCGCCAAGAGCAAGAATTTTTCCTCGGAGGAGAATATATTCCGGCTGCTGGATATGTACACCGCCATATCGGAAAATTGGCCGGAAATAGACTCCATCTTCTCTTTCGAGTCCACCGCCAGCGTCCGATCCCAAGCGCTCAACTCGCTGATCAAAATCGGCGAGTCGGTCCGGTCAATGCTGTCCGATTTTGAATCGTCAATTCAAAAGGAATCGTCAAAATCACCCGTCGCAGGCGGCGGAGTTCATCCTCTGACCCTCCGTGTGATGAATTACCTTTCCATGCTCACCGATTACAGCAACGTCTTGGCTGACATTTTCGTCGACTTCCCTCCGCCGGCGAAGGGGTTGCTGCCGGAGTTCGACATCCCCCAAGCCGACGAGTCATCGGCGCCGCCGATCTGCCACCACATCGCTTGGATCGTCCTCATCCTCATCTGCAAGCTCGACGGCAAAGCCAAGCATTACAAGGACGTTTCGCTCTCTTATCTCTTCTTAGCCAACAATCTCCAACACGTCATCTCGAAAGTCCGGACGTCGAATCTCCAGTACCTTCTCGGCGAGCAGTGGATCGCGAAATACGAAGCGAAGGTGAGACAGTTCGCCGTCAACTACGAACGGGTGGCCTGGGGGAAGGTGTTCTCCACCTTGCCGGAAAATCTAACGGAGGAAATACCCGCGGACGAAGCTAGGTTGATTTTCCGGAACTTCAACTTCAGCTTGGACGAAGCTTACCGGAAACAGAAGTCGTGTGTTGTACCGGACGAGAAACTCCGAGAAGAACTCAAAGAGTCGCTGACGAAAGCCCTCGTTTCGGTTTACAAGGAGTTTCACGATACGCATAGGGTTTCGGTTGGGAGTGCGAGAAATCTGGCCTTGTATGTCAGATTAACCCCTGAAGATGTTGCACATTACTTATCGGACTTGTTTTCCGGGACGACGGAATCTGTTAGTTCTTCGTCTCGTCGGCGCTCTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009987 GO:0010319 GO:0016209 GO:0016491 GO:0016684 GO:0031967 GO:0031975 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0051920 GO:0055114 GO:0070887 GO:0097237 GO:0098542 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko04214 map04214

Pfam Domains

Protein Families

1-cysPrx_C AhpC-TSA

Protein Analysis

632

Amino Acids

71.17

Weight (kDa)

6.34

Isoelectric Point (pI)

53.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo70_N	PF20669	49 - 134	2.4e-15	Exocyst complex component Exo70 N-terminal
Exo70_C	PF03081	252 - 614	3.5e-110	Exo70 exocyst complex subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11630 AT5G06290 AT5G06290
fragaria_vesca	FvH4_6g20020 FvH4_6g20020
malus_domestica	MD12G1037300.v1.1 MD14G1036400.v1.1
prunus_persica	Prupe.7G097900_v2.0.a1
pyrus_communis	pycom12g03230 pycom14g03190
rosa_chinensis	RchiOBHm_Chr3g0475471
rosa_laevigata	RLG00000023842
rosa_multiflora	Rmu_sc0015717.1_g000003 Rmu_sc0016637.1_g000010
rosa_roxburghii	Rroxscaffold_6G00406290
rosa_rugosa	Rorug03G0149000
rosa_samantha	Rh3AG199300 Rh3BG229100 Rh3CG223500 Rh3DG224400
rosa_wichuraiana	Rw3G018070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	734, 1238
AatII	GACGTC	1 cut(s)	1457
AccB1I	GGYRCC	1 cut(s)	1309
AccI	GTMKAC	1 cut(s)	1242
AccII	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
AccIII	TCCGGA	3 cut(s)	203, 1449, 1620
AclWI	GGATC	6 cut(s)	709, 722, 805, 1041, 1346, 1496
AcoI	YGGCCR	4 cut(s)	340, 573, 780, 998
AcsI	RAATTY	4 cut(s)	61, 698, 902, 934
AcuI	CTGAAG	2 cut(s)	1618, 1836
AcyI	GRCGYC	2 cut(s)	1310, 1454
AfaI	GTAC	4 cut(s)	519, 977, 1469, 1677
AfeI	AGCGCT	1 cut(s)	1056
AflIII	ACRYGT	1 cut(s)	1432
AgsI	TTSAA	5 cut(s)	551, 799, 1112, 1124, 1630
AhdI	GACNNNNNGTC	1 cut(s)	583
AjiI	CACGTC	1 cut(s)	1435
AjnI	CCWGG	2 cut(s)	446, 1544
AluBI	AGCT	6 cut(s)	251, 685, 1363, 1607, 1638, 1649
AluI	AGCT	6 cut(s)	251, 685, 1363, 1607, 1638, 1649
Alw26I	GTCTC	5 cut(s)	439, 562, 841, 1507, 1884
AlwI	GGATC	6 cut(s)	709, 722, 805, 1041, 1346, 1496
Aor13HI	TCCGGA	3 cut(s)	203, 1449, 1620
Aor51HI	AGCGCT	1 cut(s)	1056
AoxI	GGCC	9 cut(s)	42, 121, 198, 340, 573, 780, 998, 1542, 1791
ApeKI	GCWGC	2 cut(s)	964, 1270
ApoI	RAATTY	4 cut(s)	61, 698, 902, 934
ArsI	GACNNNNNNTTYG	4 cut(s)	318, 350, 812, 844
Asp700I	GAANNNNTTC	4 cut(s)	64, 383, 956, 1556
AspLEI	GCGC	3 cut(s)	1057, 1312, 1890
AspS9I	GGNCC	8 cut(s)	43, 78, 190, 313, 444, 585, 736, 1087
AsuC2I	CCSGG	5 cut(s)	194, 410, 425, 442, 1852
AsuHPI	GGTGA	8 cut(s)	26, 60, 245, 407, 784, 1134, 1198, 1522
AsuII	TTCGAA	1 cut(s)	900
AvaII	GGWCC	7 cut(s)	78, 190, 313, 444, 585, 736, 1087
AxyI	CCTNAGG	1 cut(s)	581
BalI	TGGCCA	1 cut(s)	782
BamHI	GGATCC	1 cut(s)	714
BanI	GGYRCC	1 cut(s)	1309
BanII	GRGCYC	1 cut(s)	415
BarI	GAAGNNNNNNTAC	2 cut(s)	371, 403
BbsI	GAAGAC	1 cut(s)	444
BbvI	GCAGC	2 cut(s)	951, 1257
BccI	CCATC	2 cut(s)	596, 1022
BceAI	ACGGC	6 cut(s)	90, 155, 355, 818, 1384, 1508
BcgI	CGANNNNNNTGC	2 cut(s)	1249, 1283
BciT130I	CCWGG	2 cut(s)	448, 1546
BciVI	GTATCC	1 cut(s)	200
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	5 cut(s)	194, 410, 425, 442, 1852
BcoDI	GTCTC	5 cut(s)	439, 562, 841, 1507, 1884
BfaI	CTAG	3 cut(s)	57, 114, 1608
BfoI	RGCGCY	3 cut(s)	1058, 1313, 1891
BfuI	GTATCC	1 cut(s)	200
BglI	GCCNNNNNGGC	1 cut(s)	176
BisI	GCNGC	5 cut(s)	885, 965, 1156, 1271, 1313
BlsI	GCNGC	5 cut(s)	886, 966, 1157, 1272, 1314
Bme1390I	CCNGG	7 cut(s)	194, 410, 425, 442, 448, 1546, 1852
Bme18I	GGWCC	7 cut(s)	78, 190, 313, 444, 585, 736, 1087
BmeRI	GACNNNNNGTC	1 cut(s)	583
BmgBI	CACGTC	1 cut(s)	1435
BmgT120I	GGNCC	8 cut(s)	43, 78, 190, 313, 444, 585, 736, 1087
BmiI	GGNNCC	8 cut(s)	23, 45, 191, 192, 315, 499, 716, 1311
BmrFI	CCNGG	7 cut(s)	194, 410, 425, 442, 448, 1546, 1852
BpiI	GAAGAC	1 cut(s)	444
BplI	GAGNNNNNCTC	4 cut(s)	522, 554, 1686, 1718
BpmI	CTGGAG	2 cut(s)	266, 1448
Bpu14I	TTCGAA	1 cut(s)	900
BpuEI	CTTGAG	1 cut(s)	58
BpuMI	CCSGG	5 cut(s)	194, 410, 425, 442, 1852
Bsa29I	ATCGAT	1 cut(s)	659
BsaBI	GATNNNNATC	1 cut(s)	1073
BsaHI	GRCGYC	2 cut(s)	1310, 1454
BsaI	GGTCTC	1 cut(s)	439
BsaJI	CCNNGG	6 cut(s)	337, 570, 621, 942, 1545, 1596
BsaWI	WCCGGW	6 cut(s)	203, 1089, 1449, 1620, 1653, 1678
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bse118I	RCCGGY	2 cut(s)	119, 1255
Bse1I	ACTGG	3 cut(s)	256, 764, 1465
Bse21I	CCTNAGG	1 cut(s)	581
Bse8I	GATNNNNATC	1 cut(s)	1073
BseAI	TCCGGA	3 cut(s)	203, 1449, 1620
BseBI	CCWGG	2 cut(s)	448, 1546
BseCI	ATCGAT	1 cut(s)	659
BseDI	CCNNGG	6 cut(s)	337, 570, 621, 942, 1545, 1596
BseGI	GGATG	4 cut(s)	21, 1165, 1284, 1347
BseJI	GATNNNNATC	1 cut(s)	1073
BseMII	CTCAG	3 cut(s)	147, 572, 760
BseNI	ACTGG	3 cut(s)	256, 764, 1465
BseRI	GAGGAG	6 cut(s)	17, 34, 90, 164, 598, 962
BseXI	GCAGC	2 cut(s)	951, 1257
Bsh1236I	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
BshFI	GGCC	9 cut(s)	44, 123, 200, 342, 575, 782, 1000, 1544, 1793
BshNI	GGYRCC	1 cut(s)	1309
BshVI	ATCGAT	1 cut(s)	659
BslFI	GGGAC	2 cut(s)	203, 1867
BsmAI	GTCTC	5 cut(s)	439, 562, 841, 1507, 1884
BsmBI	CGTCTC	2 cut(s)	841, 1884
BsmFI	GGGAC	2 cut(s)	203, 1867
BsmI	GAATGC	2 cut(s)	602, 772
BsnI	GGCC	9 cut(s)	44, 123, 200, 342, 575, 782, 1000, 1544, 1793
Bso31I	GGTCTC	1 cut(s)	439
Bsp119I	TTCGAA	1 cut(s)	900
Bsp1286I	GDGCHC	1 cut(s)	415
Bsp13I	TCCGGA	3 cut(s)	203, 1449, 1620
Bsp1407I	TGTACA	1 cut(s)	975
Bsp19I	CCATGG	1 cut(s)	570
Bsp68I	TCGCGA	1 cut(s)	1493
BspANI	GGCC	9 cut(s)	44, 123, 200, 342, 575, 782, 1000, 1544, 1793
BspCNI	CTCAG	3 cut(s)	146, 573, 759
BspDI	ATCGAT	1 cut(s)	659
BspEI	TCCGGA	3 cut(s)	203, 1449, 1620
BspFNI	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
BspLI	GGNNCC	8 cut(s)	23, 45, 191, 192, 315, 499, 716, 1311
BspPI	GGATC	6 cut(s)	709, 722, 805, 1041, 1346, 1496
BspT104I	TTCGAA	1 cut(s)	900
BspT107I	GGYRCC	1 cut(s)	1309
BspTNI	GGTCTC	1 cut(s)	439
BsrFI	RCCGGY	2 cut(s)	119, 1255
BsrGI	TGTACA	1 cut(s)	975
BsrI	ACTGG	3 cut(s)	256, 764, 1465
BssAI	RCCGGY	2 cut(s)	119, 1255
BssECI	CCNNGG	6 cut(s)	337, 570, 621, 942, 1545, 1596
BssNI	GRCGYC	2 cut(s)	1310, 1454
BssT1I	CCWWGG	2 cut(s)	570, 621
Bst2UI	CCWGG	2 cut(s)	448, 1546
Bst4CI	ACNGT	2 cut(s)	826, 1518
Bst6I	CTCTTC	4 cut(s)	712, 897, 902, 1415
BstACI	GRCGYC	2 cut(s)	1310, 1454
BstAUI	TGTACA	1 cut(s)	975
BstBI	TTCGAA	1 cut(s)	900
BstC8I	GCNNGC	6 cut(s)	121, 1039, 1153, 1257, 1361, 1481
BstDEI	CTNAG	4 cut(s)	133, 581, 746, 1414
BstDSI	CCRYGG	3 cut(s)	337, 570, 1596
BstENI	CCTNNNNNAGG	1 cut(s)	284
BstF5I	GGATG	4 cut(s)	21, 1165, 1284, 1347
BstFNI	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
BstH2I	RGCGCY	3 cut(s)	1058, 1313, 1891
BstHHI	GCGC	3 cut(s)	1057, 1312, 1890
BstMAI	GTCTC	5 cut(s)	439, 562, 841, 1507, 1884
BstMWI	GCNNNNNNNGC	4 cut(s)	176, 881, 1063, 1604
BstNI	CCWGG	2 cut(s)	448, 1546
BstSCI	CCNGG	7 cut(s)	192, 408, 423, 440, 446, 1544, 1850
BstUI	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
BstV1I	GCAGC	2 cut(s)	951, 1257
BstV2I	GAAGAC	1 cut(s)	444
BstX2I	RGATCY	2 cut(s)	714, 810
BstYI	RGATCY	2 cut(s)	714, 810
Bsu15I	ATCGAT	1 cut(s)	659
Bsu36I	CCTNAGG	1 cut(s)	581
BsuI	GTATCC	1 cut(s)	200
BsuRI	GGCC	9 cut(s)	44, 123, 200, 342, 575, 782, 1000, 1544, 1793
BsuTUI	ATCGAT	1 cut(s)	659
BtgI	CCRYGG	3 cut(s)	337, 570, 1596
BtgZI	GCGATG	4 cut(s)	155, 574, 856, 1315
BtrI	CACGTC	1 cut(s)	1435
BtsCI	GGATG	4 cut(s)	21, 1165, 1284, 1347
BtsI	GCAGTG	1 cut(s)	1490
BtsIMutI	CAGTG	1 cut(s)	1490
BtuMI	TCGCGA	1 cut(s)	1493
Cac8I	GCNNGC	6 cut(s)	121, 1039, 1153, 1257, 1361, 1481
CfoI	GCGC	3 cut(s)	1057, 1312, 1890
Cfr10I	RCCGGY	2 cut(s)	119, 1255
Cfr13I	GGNCC	8 cut(s)	43, 78, 190, 313, 444, 585, 736, 1087
Cfr42I	CCGCGG	1 cut(s)	1599
ClaI	ATCGAT	1 cut(s)	659
CpoI	CGGWCCG	1 cut(s)	1087
CseI	GACGC	2 cut(s)	146, 1030
Csp6I	GTAC	4 cut(s)	518, 976, 1468, 1676
CspCI	CAANNNNNGTGG	2 cut(s)	1316, 1351
CspI	CGGWCCG	1 cut(s)	1087
CviAII	CATG	7 cut(s)	226, 292, 352, 364, 571, 601, 1201
CviQI	GTAC	4 cut(s)	518, 976, 1468, 1676
DdeI	CTNAG	4 cut(s)	133, 581, 746, 1414
DinI	GGCGCC	1 cut(s)	1311
DrdI	GACNNNNNNGTC	2 cut(s)	734, 1238
DriI	GACNNNNNGTC	1 cut(s)	583
DseDI	GACNNNNNNGTC	2 cut(s)	734, 1238
EaeI	YGGCCR	4 cut(s)	340, 573, 780, 998
Eam1104I	CTCTTC	4 cut(s)	712, 897, 902, 1415
Eam1105I	GACNNNNNGTC	1 cut(s)	583
EarI	CTCTTC	4 cut(s)	712, 897, 902, 1415
EciI	GGCGGA	2 cut(s)	1173, 1242
Eco130I	CCWWGG	2 cut(s)	570, 621
Eco147I	AGGCCT	1 cut(s)	200
Eco24I	GRGCYC	1 cut(s)	415
Eco31I	GGTCTC	1 cut(s)	439
Eco47I	GGWCC	7 cut(s)	78, 190, 313, 444, 585, 736, 1087
Eco47III	AGCGCT	1 cut(s)	1056
Eco57I	CTGAAG	2 cut(s)	1618, 1836
Eco81I	CCTNAGG	1 cut(s)	581
EcoNI	CCTNNNNNAGG	1 cut(s)	284
EcoO109I	RGGNCCY	5 cut(s)	43, 78, 190, 313, 736
EcoRII	CCWGG	2 cut(s)	446, 1544
EcoT14I	CCWWGG	2 cut(s)	570, 621
EcoT22I	ATGCAT	2 cut(s)	297, 602
EcoT38I	GRGCYC	1 cut(s)	415
EgeI	GGCGCC	1 cut(s)	1311
EheI	GGCGCC	1 cut(s)	1311
ErhI	CCWWGG	2 cut(s)	570, 621
Esp3I	CGTCTC	2 cut(s)	841, 1884
FaeI	CATG	7 cut(s)	229, 295, 355, 367, 574, 604, 1204
FaqI	GGGAC	2 cut(s)	203, 1867
FatI	CATG	7 cut(s)	225, 291, 351, 363, 570, 600, 1200
FauI	CCCGC	2 cut(s)	464, 1603
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	1 cut(s)	1242
Fnu4HI	GCNGC	5 cut(s)	885, 965, 1156, 1271, 1313
FokI	GGATG	4 cut(s)	28, 1152, 1271, 1334
FriOI	GRGCYC	1 cut(s)	415
Fsp4HI	GCNGC	5 cut(s)	885, 965, 1156, 1271, 1313
FspBI	CTAG	3 cut(s)	57, 114, 1608
GlaI	GCGC	3 cut(s)	1056, 1311, 1889
GluI	GCNGC	5 cut(s)	885, 965, 1156, 1271, 1313
GsuI	CTGGAG	2 cut(s)	266, 1448
HaeII	RGCGCY	3 cut(s)	1058, 1313, 1891
HaeIII	GGCC	9 cut(s)	44, 123, 200, 342, 575, 782, 1000, 1544, 1793
HgaI	GACGC	2 cut(s)	146, 1030
HhaI	GCGC	3 cut(s)	1057, 1312, 1890
Hin1I	GRCGYC	2 cut(s)	1310, 1454
Hin1II	CATG	7 cut(s)	229, 295, 355, 367, 574, 604, 1204
Hin6I	GCGC	3 cut(s)	1055, 1310, 1888
HinP1I	GCGC	3 cut(s)	1055, 1310, 1888
HincII	GTYRAC	2 cut(s)	1243, 1528
HindII	GTYRAC	2 cut(s)	1243, 1528
HindIII	AAGCTT	1 cut(s)	1647
HphI	GGTGA	8 cut(s)	26, 60, 245, 407, 784, 1134, 1198, 1522
Hpy166II	GTNNAC	8 cut(s)	274, 337, 634, 978, 1032, 1243, 1528, 1738
Hpy8I	GTNNAC	8 cut(s)	274, 337, 634, 978, 1032, 1243, 1528, 1738
HpyAV	CCTTC	8 cut(s)	280, 373, 665, 769, 1255, 1481, 1501, 1546
HpyCH4III	ACNGT	2 cut(s)	826, 1518
HpyCH4IV	ACGT	5 cut(s)	546, 1221, 1392, 1434, 1454
HpyCH4V	TGCA	5 cut(s)	295, 355, 600, 1359, 1826
HpyF10VI	GCNNNNNNNGC	4 cut(s)	176, 881, 1063, 1604
HpyF3I	CTNAG	4 cut(s)	133, 581, 746, 1414
HpySE526I	ACGT	5 cut(s)	546, 1221, 1392, 1434, 1454
Hsp92I	GRCGYC	2 cut(s)	1310, 1454
Hsp92II	CATG	7 cut(s)	229, 295, 355, 367, 574, 604, 1204
HspAI	GCGC	3 cut(s)	1055, 1310, 1888
KasI	GGCGCC	1 cut(s)	1309
KflI	GGGWCCC	1 cut(s)	190
Kpn2I	TCCGGA	3 cut(s)	203, 1449, 1620
KroI	GCCGGC	2 cut(s)	119, 1255
KroNI	GCCGGC	2 cut(s)	121, 1257
Ksp22I	TGATCA	1 cut(s)	1068
KspI	CCGCGG	1 cut(s)	1599
LmnI	GCTCC	2 cut(s)	21, 497
Lsp1109I	GCAGC	2 cut(s)	951, 1257
MaeI	CTAG	3 cut(s)	57, 114, 1608
MaeII	ACGT	5 cut(s)	546, 1221, 1392, 1434, 1454
MaeIII	GTNAC	3 cut(s)	107, 217, 372
MflI	RGATCY	2 cut(s)	714, 810
MhlI	GDGCHC	1 cut(s)	415
MlsI	TGGCCA	1 cut(s)	782
MluCI	AATT	7 cut(s)	61, 698, 902, 934, 994, 1119, 1189
MluNI	TGGCCA	1 cut(s)	782
Mly113I	GGCGCC	1 cut(s)	1310
MlyI	GAGTC	6 cut(s)	863, 1004, 1037, 1091, 1310, 1718
MmeI	TCCRAC	3 cut(s)	567, 864, 1453
Mox20I	TGGCCA	1 cut(s)	782
Mph1103I	ATGCAT	2 cut(s)	297, 602
MreI	CGCCGGCG	1 cut(s)	1255
MroI	TCCGGA	3 cut(s)	203, 1449, 1620
MroNI	GCCGGC	2 cut(s)	119, 1255
MroXI	GAANNNNTTC	4 cut(s)	64, 383, 956, 1556
MscI	TGGCCA	1 cut(s)	782
MseI	TTAA	2 cut(s)	503, 1808
Msp20I	TGGCCA	1 cut(s)	782
MspA1I	CMGCKG	1 cut(s)	1598
MspR9I	CCNGG	7 cut(s)	194, 410, 425, 442, 448, 1546, 1852
Mva1269I	GAATGC	2 cut(s)	602, 772
MvaI	CCWGG	2 cut(s)	448, 1546
MvnI	CGCG	5 cut(s)	140, 212, 459, 1493, 1598
MwoI	GCNNNNNNNGC	4 cut(s)	176, 881, 1063, 1604
NaeI	GCCGGC	2 cut(s)	121, 1257
NarI	GGCGCC	1 cut(s)	1310
NciI	CCSGG	5 cut(s)	194, 410, 425, 442, 1852
NcoI	CCATGG	1 cut(s)	570
NgoMIV	GCCGGC	2 cut(s)	119, 1255
NlaIII	CATG	7 cut(s)	229, 295, 355, 367, 574, 604, 1204
NlaIV	GGNNCC	8 cut(s)	23, 45, 191, 192, 315, 499, 716, 1311
NmeAIII	GCCGAG	1 cut(s)	1455
NruI	TCGCGA	1 cut(s)	1493
NsiI	ATGCAT	2 cut(s)	297, 602
NspV	TTCGAA	1 cut(s)	900
PceI	AGGCCT	1 cut(s)	200
PcsI	WCGNNNNNNNCGW	6 cut(s)	144, 486, 489, 1313, 1338, 1497
PctI	GAATGC	2 cut(s)	602, 772
PdiI	GCCGGC	2 cut(s)	121, 1257
PdmI	GAANNNNTTC	4 cut(s)	64, 383, 956, 1556
PfeI	GAWTC	8 cut(s)	394, 428, 533, 750, 1112, 1130, 1459, 1862
PflFI	GACNNNGTC	1 cut(s)	442
PfoI	TCCNGGA	1 cut(s)	1850
PkrI	GCNGC	5 cut(s)	886, 966, 1157, 1272, 1314
PleI	GAGTC	6 cut(s)	862, 1004, 1036, 1090, 1309, 1717
PluTI	GGCGCC	1 cut(s)	1313
PpsI	GAGTC	6 cut(s)	862, 1004, 1036, 1090, 1309, 1717
PpuMI	RGGWCCY	4 cut(s)	78, 190, 313, 736
Psp5II	RGGWCCY	4 cut(s)	78, 190, 313, 736
Psp6I	CCWGG	2 cut(s)	446, 1544
PspGI	CCWGG	2 cut(s)	446, 1544
PspN4I	GGNNCC	8 cut(s)	23, 45, 191, 192, 315, 499, 716, 1311
PspPI	GGNCC	8 cut(s)	43, 78, 190, 313, 444, 585, 736, 1087
PspPPI	RGGWCCY	4 cut(s)	78, 190, 313, 736
PsuI	RGATCY	2 cut(s)	714, 810
PsyI	GACNNNGTC	1 cut(s)	442
RruI	TCGCGA	1 cut(s)	1493
RsaI	GTAC	4 cut(s)	519, 977, 1469, 1677
RsaNI	GTAC	4 cut(s)	518, 976, 1468, 1676
Rsr2I	CGGWCCG	1 cut(s)	1087
RsrII	CGGWCCG	1 cut(s)	1087
SacII	CCGCGG	1 cut(s)	1599
SalI	GTCGAC	1 cut(s)	1241
SaqAI	TTAA	2 cut(s)	503, 1808
SatI	GCNGC	5 cut(s)	885, 965, 1156, 1271, 1313
Sau96I	GGNCC	8 cut(s)	43, 78, 190, 313, 444, 585, 736, 1087
SchI	GAGTC	6 cut(s)	863, 1004, 1037, 1091, 1310, 1718
ScrFI	CCNGG	7 cut(s)	194, 410, 425, 442, 448, 1546, 1852
SduI	GDGCHC	1 cut(s)	415
SfoI	GGCGCC	1 cut(s)	1311
Sfr303I	CCGCGG	1 cut(s)	1599
SfuI	TTCGAA	1 cut(s)	900
SgrAI	CRCCGGYG	1 cut(s)	1255
SgrBI	CCGCGG	1 cut(s)	1599
SinI	GGWCC	7 cut(s)	78, 190, 313, 444, 585, 736, 1087
SmlI	CTYRAG	1 cut(s)	73
SmoI	CTYRAG	1 cut(s)	73
Sse9I	AATT	7 cut(s)	61, 698, 902, 934, 994, 1119, 1189
SseBI	AGGCCT	1 cut(s)	200
SspDI	GGCGCC	1 cut(s)	1309
SspMI	CTAG	3 cut(s)	57, 114, 1608
StuI	AGGCCT	1 cut(s)	200
StyD4I	CCNGG	7 cut(s)	192, 408, 423, 440, 446, 1544, 1850
StyI	CCWWGG	2 cut(s)	570, 621
TaaI	ACNGT	2 cut(s)	826, 1518
TaiI	ACGT	5 cut(s)	549, 1224, 1395, 1437, 1457
TaqII	GACCGA	2 cut(s)	421, 1075
TasI	AATT	7 cut(s)	61, 698, 902, 934, 994, 1119, 1189
TatI	WGTACW	1 cut(s)	975
TauI	GCSGC	3 cut(s)	887, 1158, 1315
TfiI	GAWTC	8 cut(s)	394, 428, 533, 750, 1112, 1130, 1459, 1862
Tru1I	TTAA	2 cut(s)	503, 1808
Tru9I	TTAA	2 cut(s)	503, 1808
TscAI	CASTG	1 cut(s)	1490
TseI	GCWGC	2 cut(s)	964, 1270
TspDTI	ATGAA	5 cut(s)	78, 250, 380, 1154, 1202
TspGWI	ACGGA	8 cut(s)	259, 260, 454, 510, 816, 1169, 1598, 1874
TspRI	CASTG	1 cut(s)	1490
Tth111I	GACNNNGTC	1 cut(s)	442
VpaK11BI	GGWCC	7 cut(s)	78, 190, 313, 444, 585, 736, 1087
XagI	CCTNNNNNAGG	1 cut(s)	284
XapI	RAATTY	4 cut(s)	61, 698, 902, 934
XbaI	TCTAGA	1 cut(s)	56
XmiI	GTMKAC	1 cut(s)	1242
XmnI	GAANNNNTTC	4 cut(s)	64, 383, 956, 1556
XspI	CTAG	3 cut(s)	57, 114, 1608
ZraI	GACGTC	1 cut(s)	1455
Zsp2I	ATGCAT	2 cut(s)	297, 602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.