Rorug03G0241000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0006267
Physical Location & Seq
Reverse (-)
22513113 .. 22515249
2137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0241000.1

Sequence Viewer

Length: 1671 bp
ATGTCAGTTGAATTGGGACAGGGAGGCGAGACTGAGAATAGTCTTTATGATACTTTTTTTTTTTTTGGCAAAGTAGTCTTTATGATACTTGGCCATTCACTTTTGTCTTTTGGCAAGCTTAGATCGATGGCGGACGGTATTGATCAAGAGCTTGTGGACTTCGAAAGTCTGCACGAAACCATCAGCATTGGATCCTTTATACATAAACAGCCAGAGAGCGAGATAAGCTTTACCCAAAAGATGTATCGAAAGAAACTTAAGTGGACCACCGAAATCGAAGAAAAGCTCCACAATGTGCGGCCGTGGAACTTGGGCATCTACAGAGTTCCAAATAGACTTCGTCAAGTCAATGAGGATGCCTACAGCCCTCATGTTGTCTCCATCGGTCCTTTCCATCGACACAAGCCTAACCTAGTAGCCATGAGAGAGCACAAGTTGCGTTATGCGCTATATTTCTTTAAGCAAGCACAAGAAATAGCACAAAAACGAGCTCTGAGTTTCAGCTTTGGATCGCGCGAGTCTTCCGAATGCATGAGAGAGTGGGCGACTGCTATTTATGATTCAGACGCAGAGGTTCGTGGAAGCTACGCTGAAGATATGAGCAACATTGATCAGGAGGAACTAGCAGAAATAATGTTGGTCGATGGTTGCTTCTTATTAGAACTTTTCATCAGGTTTTACCTATACGTGCACGGGAAGTTAGAAGGCCCTGAATCTGATCCAATTCTAGAAAGTGCTTGGATGATTGCAGATCTACGGCACGATCTGGCATTGCTTGAAAACCAAATCCCCTTATTTATTATACATGATTTGTATGATGCTATCAGTGGTCATCAGATTCTTGTTGACAATGATTTGCCTCCGCCACATGGTCTTGCTCTTCATTTCTTTCAACCTGTGAGCCTCAAGGCAAGCATTGTAACAGAGTGGAGACATGAGCACAAGCATTTGCTGGATATCTTGCACAAGTTCTATTTCCTTCCGACTAAAACTACGGACTTGTCTATGAGGCTCAATATGGAATTGATCCCTGAGGAGCAGCGTCTTAGGGCAGTCCAAAAGAATAAAGTATGGGGATTCAATTATTGTGCCTCCGAACTTTTGGAATCTGGAGTCGAGTTTGGCATTGGCTCCAGCCAGGACCAGTTGCTGGACATAACTTTCCGTGAGGGAGTAATCAGAATTCCACCACTGTTTATCCACGAGACGACGAGTTCATTGTTGAGGAACCTGATTGCTTATGAGCAATGCAGTCTTAGTAGTACGCATGGCGTTACATCATATGCCTGCCTCATGAAGAGTCTCATCGATTCCTCGCGGGATAGCAATCTGCTTCAGGAGAAGGGGATAACAAAATATCACCACTGGATTGGAGGTGAAGATGAATATTTGACTCAAATATTCAGAAGTATACTAGATGAAGTTGTTGTCAAGGAATTCCATTTTAGAACCTTGTGCGATGAAGTGAATGAATACTGTACGTCCTGGTTTCATCTGAGAAAACTCAAAGTATTTCTGAGGGTGCGGATTCAAAGATATAGGAGGCTCCTTTTCAGCACTTATTTTTCTTCTCCATGGAGTTTCATATCATTCATGGCAGCGCTCACCATTCTCATTCTCACATCTTTGCAGACATACTATTCCATGCACACAGCTCGTACTATCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

556

Amino Acids

64.74

Weight (kDa)

5.98

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 106 - 540 8.2e-100 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1150
AccI GTMKAC 1 cut(s) 1411
AccII CGCG 3 cut(s) 514, 516, 1318
AciI CCGC 5 cut(s) 131, 298, 863, 1318, 1525
AclWI GGATC 5 cut(s) 186, 199, 517, 713, 1021
AcoI YGGCCR 2 cut(s) 91, 299
AcsI RAATTY 2 cut(s) 1182, 1436
AcuI CTGAAG 2 cut(s) 612, 1319
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 3 cut(s) 1264, 1480, 1660
AfeI AGCGCT 1 cut(s) 1602
AfiI CCNNNNNNNGG 2 cut(s) 869, 1150
AflII CTTAAG 1 cut(s) 257
AgsI TTSAA 5 cut(s) 11, 779, 893, 1081, 1532
AjnI CCWGG 2 cut(s) 1137, 1484
AluBI AGCT 8 cut(s) 118, 151, 228, 286, 491, 504, 585, 1655
AluI AGCT 8 cut(s) 118, 151, 228, 286, 491, 504, 585, 1655
Alw21I GWGCWC 4 cut(s) 432, 493, 693, 942
Alw26I GTCTC 5 cut(s) 23, 382, 925, 1199, 1307
Alw44I GTGCAC 1 cut(s) 689
AlwI GGATC 5 cut(s) 186, 199, 517, 713, 1021
AlwNI CAGNNNCTG 1 cut(s) 1150
Aor51HI AGCGCT 1 cut(s) 1602
AoxI GGCC 3 cut(s) 91, 299, 706
ApaLI GTGCAC 1 cut(s) 689
ApeKI GCWGC 2 cut(s) 1039, 1598
ApoI RAATTY 2 cut(s) 1182, 1436
AspLEI GCGC 3 cut(s) 448, 516, 1603
AspS9I GGNCC 4 cut(s) 264, 386, 707, 1141
AsuHPI GGTGA 3 cut(s) 1352, 1388, 1597
AsuII TTCGAA 1 cut(s) 162
AvaII GGWCC 3 cut(s) 264, 386, 1141
AxyI CCTNAGG 1 cut(s) 1032
BaeGI GKGCMC 1 cut(s) 693
BalI TGGCCA 1 cut(s) 93
BamHI GGATCC 1 cut(s) 191
BanII GRGCYC 1 cut(s) 493
BauI CACGAG 1 cut(s) 1202
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 4 cut(s) 432, 493, 693, 942
BbvI GCAGC 2 cut(s) 1051, 1610
BccI CCATC 5 cut(s) 121, 188, 389, 402, 638
BceAI ACGGC 2 cut(s) 286, 773
BcgI CGANNNNNNTGC 2 cut(s) 1637, 1671
BciT130I CCWGG 2 cut(s) 1139, 1486
BclI TGATCA 2 cut(s) 142, 610
BcoDI GTCTC 5 cut(s) 23, 382, 925, 1199, 1307
BfaI CTAG 4 cut(s) 413, 623, 728, 1415
BfmI CTRYAG 2 cut(s) 319, 361
BfoI RGCGCY 1 cut(s) 1604
BfrI CTTAAG 1 cut(s) 257
BglII AGATCT 1 cut(s) 751
BisI GCNGC 3 cut(s) 299, 1040, 1599
BlsI GCNGC 3 cut(s) 300, 1041, 1600
Bme1390I CCNGG 2 cut(s) 1139, 1486
Bme18I GGWCC 3 cut(s) 264, 386, 1141
BmgT120I GGNCC 4 cut(s) 264, 386, 707, 1141
BmiI GGNNCC 4 cut(s) 193, 1132, 1229, 1547
BmrFI CCNGG 2 cut(s) 1139, 1486
BmsI GCATC 3 cut(s) 324, 346, 808
BpiI GAAGAC 1 cut(s) 513
BpmI CTGGAG 2 cut(s) 1117, 1131
Bpu14I TTCGAA 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 890
Bsa29I ATCGAT 2 cut(s) 125, 1308
BsaAI YACGTR 1 cut(s) 688
BsaBI GATNNNNATC 1 cut(s) 1326
BsaJI CCNNGG 2 cut(s) 302, 1574
Bsc4I CCNNNNNNNGG 2 cut(s) 869, 1150
Bse1I ACTGG 2 cut(s) 1144, 1370
Bse21I CCTNAGG 1 cut(s) 1032
Bse3DI GCAATG 2 cut(s) 770, 1253
Bse8I GATNNNNATC 1 cut(s) 1326
BseBI CCWGG 2 cut(s) 1139, 1486
BseCI ATCGAT 2 cut(s) 125, 1308
BseDI CCNNGG 2 cut(s) 302, 1574
BseGI GGATG 2 cut(s) 361, 747
BseJI GATNNNNATC 1 cut(s) 1326
BseLI CCNNNNNNNGG 2 cut(s) 869, 1150
BseMI GCAATG 2 cut(s) 770, 1253
BseMII CTCAG 5 cut(s) 24, 485, 1023, 1487, 1508
BseNI ACTGG 2 cut(s) 1144, 1370
BseRI GAGGAG 1 cut(s) 1049
BseSI GKGCMC 1 cut(s) 693
BseX3I CGGCCG 1 cut(s) 299
BseXI GCAGC 2 cut(s) 1051, 1610
BsgI GTGCAG 1 cut(s) 155
Bsh1236I CGCG 3 cut(s) 514, 516, 1318
Bsh1285I CGRYCG 1 cut(s) 302
BshFI GGCC 3 cut(s) 93, 301, 708
BshVI ATCGAT 2 cut(s) 125, 1308
BsiEI CGRYCG 1 cut(s) 302
BsiHKAI GWGCWC 4 cut(s) 432, 493, 693, 942
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 2 cut(s) 869, 1150
BsmAI GTCTC 5 cut(s) 23, 382, 925, 1199, 1307
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 533
BsnI GGCC 3 cut(s) 93, 301, 708
Bsp119I TTCGAA 1 cut(s) 162
Bsp1286I GDGCHC 4 cut(s) 432, 493, 693, 942
Bsp143I GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
Bsp19I CCATGG 1 cut(s) 1574
BspACI CCGC 5 cut(s) 131, 298, 863, 1318, 1525
BspANI GGCC 3 cut(s) 93, 301, 708
BspCNI CTCAG 5 cut(s) 25, 486, 1024, 1488, 1509
BspDI ATCGAT 2 cut(s) 125, 1308
BspFNI CGCG 3 cut(s) 514, 516, 1318
BspHI TCATGA 1 cut(s) 1293
BspLI GGNNCC 4 cut(s) 193, 1132, 1229, 1547
BspPI GGATC 5 cut(s) 186, 199, 517, 713, 1021
BspQI GCTCTTC 1 cut(s) 885
BspT104I TTCGAA 1 cut(s) 162
BspTI CTTAAG 1 cut(s) 257
BsrDI GCAATG 2 cut(s) 770, 1253
BsrI ACTGG 2 cut(s) 1144, 1370
BssECI CCNNGG 2 cut(s) 302, 1574
BssMI GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
BssNAI GTATAC 1 cut(s) 1412
BssSI CACGAG 1 cut(s) 1202
BssT1I CCWWGG 1 cut(s) 1574
Bst1107I GTATAC 1 cut(s) 1412
Bst2BI CACGAG 1 cut(s) 1202
Bst2UI CCWGG 2 cut(s) 1139, 1486
Bst4CI ACNGT 3 cut(s) 137, 1194, 1478
Bst6I CTCTTC 2 cut(s) 885, 1292
BstAFI CTTAAG 1 cut(s) 257
BstAPI GCANNNNNTGC 1 cut(s) 436
BstBAI YACGTR 1 cut(s) 688
BstBI TTCGAA 1 cut(s) 162
BstC8I GCNNGC 4 cut(s) 116, 465, 913, 1288
BstDEI CTNAG 8 cut(s) 33, 119, 494, 1032, 1046, 1256, 1496, 1517
BstDSI CCRYGG 2 cut(s) 302, 1574
BstF5I GGATG 2 cut(s) 361, 747
BstFNI CGCG 3 cut(s) 514, 516, 1318
BstH2I RGCGCY 1 cut(s) 1604
BstHHI GCGC 3 cut(s) 448, 516, 1603
BstKTI GATC 9 cut(s) 125, 145, 194, 512, 613, 721, 754, 766, 1029
BstMAI GTCTC 5 cut(s) 23, 382, 925, 1199, 1307
BstMBI GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
BstMCI CGRYCG 1 cut(s) 302
BstMWI GCNNNNNNNGC 3 cut(s) 225, 436, 445
BstNI CCWGG 2 cut(s) 1139, 1486
BstSCI CCNGG 2 cut(s) 1137, 1484
BstSFI CTRYAG 2 cut(s) 319, 361
BstSLI GKGCMC 1 cut(s) 693
BstUI CGCG 3 cut(s) 514, 516, 1318
BstV1I GCAGC 2 cut(s) 1051, 1610
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 2 cut(s) 191, 751
BstXI CCANNNNNNTGG 1 cut(s) 1370
BstYI RGATCY 2 cut(s) 191, 751
BstZ17I GTATAC 1 cut(s) 1412
BstZI CGGCCG 1 cut(s) 299
Bsu15I ATCGAT 2 cut(s) 125, 1308
Bsu36I CCTNAGG 1 cut(s) 1032
BsuRI GGCC 3 cut(s) 93, 301, 708
BsuTUI ATCGAT 2 cut(s) 125, 1308
BtgI CCRYGG 2 cut(s) 302, 1574
BtgZI GCGATG 1 cut(s) 1473
BtsCI GGATG 2 cut(s) 361, 747
BtsIMutI CAGTG 3 cut(s) 832, 1190, 1363
Cac8I GCNNGC 4 cut(s) 116, 465, 913, 1288
CaiI CAGNNNCTG 1 cut(s) 1150
CciI TCATGA 1 cut(s) 1293
CfoI GCGC 3 cut(s) 448, 516, 1603
Cfr13I GGNCC 4 cut(s) 264, 386, 707, 1141
ClaI ATCGAT 2 cut(s) 125, 1308
CseI GACGC 2 cut(s) 575, 1031
Csp6I GTAC 3 cut(s) 1263, 1479, 1659
CviQI GTAC 3 cut(s) 1263, 1479, 1659
DdeI CTNAG 8 cut(s) 33, 119, 494, 1032, 1046, 1256, 1496, 1517
DpnI GATC 9 cut(s) 124, 144, 193, 511, 612, 720, 753, 765, 1028
DpnII GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
DraIII CACNNNGTG 1 cut(s) 295
EaeI YGGCCR 2 cut(s) 91, 299
EagI CGGCCG 1 cut(s) 299
Eam1104I CTCTTC 2 cut(s) 885, 1292
EarI CTCTTC 2 cut(s) 885, 1292
EciI GGCGGA 2 cut(s) 146, 852
Ecl136II GAGCTC 1 cut(s) 491
EclXI CGGCCG 1 cut(s) 299
Eco130I CCWWGG 1 cut(s) 1574
Eco24I GRGCYC 1 cut(s) 493
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 3 cut(s) 264, 386, 1141
Eco47III AGCGCT 1 cut(s) 1602
Eco52I CGGCCG 1 cut(s) 299
Eco53kI GAGCTC 1 cut(s) 491
Eco57I CTGAAG 2 cut(s) 612, 1319
Eco81I CCTNAGG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 491
EcoO109I RGGNCCY 1 cut(s) 707
EcoRI GAATTC 2 cut(s) 1182, 1436
EcoRII CCWGG 2 cut(s) 1137, 1484
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 1574
EcoT22I ATGCAT 1 cut(s) 533
EcoT38I GRGCYC 1 cut(s) 493
ErhI CCWWGG 1 cut(s) 1574
Esp3I CGTCTC 1 cut(s) 1199
FaqI GGGAC 1 cut(s) 30
FauI CCCGC 1 cut(s) 1311
FauNDI CATATG 1 cut(s) 1282
FbaI TGATCA 2 cut(s) 142, 610
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 3 cut(s) 299, 1040, 1599
FokI GGATG 2 cut(s) 368, 754
FriOI GRGCYC 1 cut(s) 493
Fsp4HI GCNGC 3 cut(s) 299, 1040, 1599
FspBI CTAG 4 cut(s) 413, 623, 728, 1415
GlaI GCGC 3 cut(s) 447, 515, 1602
GluI GCNGC 3 cut(s) 299, 1040, 1599
GsuI CTGGAG 2 cut(s) 1117, 1131
HaeII RGCGCY 1 cut(s) 1604
HaeIII GGCC 3 cut(s) 93, 301, 708
HgaI GACGC 2 cut(s) 575, 1031
HhaI GCGC 3 cut(s) 448, 516, 1603
Hin6I GCGC 3 cut(s) 446, 514, 1601
HinP1I GCGC 3 cut(s) 446, 514, 1601
HincII GTYRAC 1 cut(s) 847
HindII GTYRAC 1 cut(s) 847
HindIII AAGCTT 2 cut(s) 116, 226
HphI GGTGA 3 cut(s) 1352, 1388, 1597
Hpy166II GTNNAC 5 cut(s) 157, 264, 691, 847, 1412
Hpy188III TCNNGA 6 cut(s) 146, 614, 728, 1110, 1294, 1337
Hpy8I GTNNAC 5 cut(s) 157, 264, 691, 847, 1412
Hpy99I CGWCG 1 cut(s) 1213
HpyAV CCTTC 3 cut(s) 698, 989, 1336
HpyCH4III ACNGT 3 cut(s) 137, 1194, 1478
HpyCH4IV ACGT 2 cut(s) 687, 1481
HpyCH4V TGCA 8 cut(s) 172, 531, 691, 749, 964, 1251, 1630, 1648
HpyF10VI GCNNNNNNNGC 3 cut(s) 225, 436, 445
HpyF3I CTNAG 8 cut(s) 33, 119, 494, 1032, 1046, 1256, 1496, 1517
HpySE526I ACGT 2 cut(s) 687, 1481
HspAI GCGC 3 cut(s) 446, 514, 1601
Ksp22I TGATCA 2 cut(s) 142, 610
Kzo9I GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
LguI GCTCTTC 1 cut(s) 885
LmnI GCTCC 4 cut(s) 291, 1036, 1136, 1551
Lsp1109I GCAGC 2 cut(s) 1051, 1610
LweI GCATC 3 cut(s) 324, 346, 808
MaeI CTAG 4 cut(s) 413, 623, 728, 1415
MaeII ACGT 2 cut(s) 687, 1481
MaeIII GTNAC 2 cut(s) 919, 1273
MalI GATC 9 cut(s) 124, 144, 193, 511, 612, 720, 753, 765, 1028
MboI GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
MboII GAAGA 7 cut(s) 290, 513, 605, 872, 1309, 1391, 1560
MflI RGATCY 2 cut(s) 191, 751
MhlI GDGCHC 4 cut(s) 432, 493, 693, 942
MlsI TGGCCA 1 cut(s) 93
MluCI AATT 7 cut(s) 11, 723, 1022, 1081, 1182, 1436, 1666
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 4 cut(s) 527, 1122, 1309, 1387
MmeI TCCRAC 1 cut(s) 1007
Mox20I TGGCCA 1 cut(s) 93
Mph1103I ATGCAT 1 cut(s) 533
MscI TGGCCA 1 cut(s) 93
MseI TTAA 3 cut(s) 258, 459, 1669
Msp20I TGGCCA 1 cut(s) 93
MspCI CTTAAG 1 cut(s) 257
MspR9I CCNGG 2 cut(s) 1139, 1486
Mva1269I GAATGC 1 cut(s) 533
MvaI CCWGG 2 cut(s) 1139, 1486
MvnI CGCG 3 cut(s) 514, 516, 1318
MwoI GCNNNNNNNGC 3 cut(s) 225, 436, 445
NcoI CCATGG 1 cut(s) 1574
NdeI CATATG 1 cut(s) 1282
NdeII GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
NlaIV GGNNCC 4 cut(s) 193, 1132, 1229, 1547
NsiI ATGCAT 1 cut(s) 533
NspV TTCGAA 1 cut(s) 162
PagI TCATGA 1 cut(s) 1293
PciSI GCTCTTC 1 cut(s) 885
PctI GAATGC 1 cut(s) 533
PfeI GAWTC 7 cut(s) 560, 713, 838, 1077, 1106, 1310, 1528
PflFI GACNNNGTC 1 cut(s) 339
PflMI CCANNNNNTGG 1 cut(s) 1150
PkrI GCNGC 3 cut(s) 300, 1041, 1600
PleI GAGTC 4 cut(s) 526, 1121, 1308, 1387
PpsI GAGTC 4 cut(s) 526, 1121, 1308, 1387
Ppu21I YACGTR 1 cut(s) 688
Psp124BI GAGCTC 1 cut(s) 493
Psp6I CCWGG 2 cut(s) 1137, 1484
PspGI CCWGG 2 cut(s) 1137, 1484
PspN4I GGNNCC 4 cut(s) 193, 1132, 1229, 1547
PspPI GGNCC 4 cut(s) 264, 386, 707, 1141
PstNI CAGNNNCTG 1 cut(s) 1150
PsuI RGATCY 2 cut(s) 191, 751
PsyI GACNNNGTC 1 cut(s) 339
RsaI GTAC 3 cut(s) 1264, 1480, 1660
RsaNI GTAC 3 cut(s) 1263, 1479, 1659
SacI GAGCTC 1 cut(s) 493
SapI GCTCTTC 1 cut(s) 885
SaqAI TTAA 3 cut(s) 258, 459, 1669
SatI GCNGC 3 cut(s) 299, 1040, 1599
Sau3AI GATC 9 cut(s) 122, 142, 191, 509, 610, 718, 751, 763, 1026
Sau96I GGNCC 4 cut(s) 264, 386, 707, 1141
SchI GAGTC 4 cut(s) 527, 1122, 1309, 1387
ScrFI CCNGG 2 cut(s) 1139, 1486
SduI GDGCHC 4 cut(s) 432, 493, 693, 942
SfaNI GCATC 3 cut(s) 324, 346, 808
SfcI CTRYAG 2 cut(s) 319, 361
SfuI TTCGAA 1 cut(s) 162
SinI GGWCC 3 cut(s) 264, 386, 1141
SmlI CTYRAG 2 cut(s) 257, 905
SmoI CTYRAG 2 cut(s) 257, 905
Sse9I AATT 7 cut(s) 11, 723, 1022, 1081, 1182, 1436, 1666
SsiI CCGC 5 cut(s) 131, 298, 863, 1318, 1525
SspI AATATT 2 cut(s) 1388, 1401
SspMI CTAG 4 cut(s) 413, 623, 728, 1415
SstI GAGCTC 1 cut(s) 493
StyD4I CCNGG 2 cut(s) 1137, 1484
StyI CCWWGG 1 cut(s) 1574
TaaI ACNGT 3 cut(s) 137, 1194, 1478
TaiI ACGT 2 cut(s) 690, 1484
TaqI TCGA 8 cut(s) 125, 162, 247, 276, 397, 642, 1116, 1308
TaqII GACCGA 1 cut(s) 374
TasI AATT 7 cut(s) 11, 723, 1022, 1081, 1182, 1436, 1666
TauI GCSGC 1 cut(s) 301
TfiI GAWTC 7 cut(s) 560, 713, 838, 1077, 1106, 1310, 1528
Tru1I TTAA 3 cut(s) 258, 459, 1669
Tru9I TTAA 3 cut(s) 258, 459, 1669
TscAI CASTG 3 cut(s) 832, 1197, 1370
TseI GCWGC 2 cut(s) 1039, 1598
TspGWI ACGGA 2 cut(s) 1010, 1154
TspRI CASTG 3 cut(s) 832, 1197, 1370
Tth111I GACNNNGTC 1 cut(s) 339
Van91I CCANNNNNTGG 1 cut(s) 1150
Vha464I CTTAAG 1 cut(s) 257
VneI GTGCAC 1 cut(s) 689
VpaK11BI GGWCC 3 cut(s) 264, 386, 1141
XapI RAATTY 2 cut(s) 1182, 1436
XbaI TCTAGA 1 cut(s) 727
XmiI GTMKAC 1 cut(s) 1411
XspI CTAG 4 cut(s) 413, 623, 728, 1415
Zsp2I ATGCAT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.