Rorug04G0089900

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0017467
Physical Location & Seq
Forward (+)
13947739 .. 13952288
4550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0089900.1

Sequence Viewer

Length: 2283 bp
ATGGAGAGGCGCAGCAAAAGAAAACGGAAACCGGAATCCGACGCCGCCGTCAGTGAAGACACCACCGCCTTCGCCGTCTTACTCTCCGCCCTCTCATCTCAAAACCCCGACTCCCACCGCCCCTTACTCACCAAATGCCTCAACAAACTCCGCCGCTCCTTCCACAGCCCCCTCCTCTCTCTCCTCCCCACTCTCCTCACCCGCACCTCCGCTTCCCTCGCCTCCCGCGCCGCCGACATGGTGGGCTCCGCCGCCCTCGAGTCCCTCGACATGAACCGCACCATCGCTTCCGACGCTGACATCATCCATGCCTTGCTCTCCAGGTGCTCCGTCTCCGCCTGCAATGCTCTTCTCGATTTGTGCACTACTTGGGTCGGACGACGCCGTTTGATCGAGTTCTCTGCTCTTCCGACGATTCTATTTCGGTTTCTTCGGGTTCGTAAATATTCAACAATTTCAGTTACTGTGTGCTCTGCCTCTGGGGATAGCAAAGATGTAAACTCTGTTAGTGTAGGATTTAAGATGGATGAAGTTTCTGTGTTGATTCTCAATTCTGCAATTATTCTCATCAATACCTGTGACATTGAACAATTGGATAAAATCCCGGGACACCTATCGCAAGCTTTCTTTGCATTTATGAGGAATCTGTGGGCGAATGTGCGAAATGCAATGTCACTCGCAAGCCCTTTGGATTCTACACCAGGGGGAGACTTGTATATTAGCAACATTAGAGTTGGTCATGTGGCCGAAAGCCTGTTCAGGCTTTCCATTTGTGCGTCTCGGCTCGTCACGCCTTTGCCTTTTCGTGTGGTTGAGAGACGTGTATTTGGTTTCACTGAGTCGGGTTTTAGAGGTTTTATGTCTAACCACTGGGAGGTATCGCCATTTCTTGTGAGGAGGCTGTCAGCTGGGGTGAAAATTGAGGAGGATGATTTTTTCGGCCCATTATCAGTGAATTTGGTGGGAGCATATCCTTCTTTTCTTTCGTCAATCCTTCCAGGGATGGTTTCTTGTCTTCCGATTTCTTCAGACGAGTTAAATATCCTTGCATTTCTGGAAGAGGCGCAGAGCAAATTGGGTTGTCCTCTAATTTACCAGCAGGACATTCGGGTTGTTAAAACGAAAAGCAAGAAGGAGGTGCATTTCTTTGTGGACAGTCTGGCATCTTGCTGCATAAAGGATCCTCATTGTCTTAGTGCCGAGGATGTTTCAAAATGCGAAGAAGCATATAAAGACGGTTATACAGTTGCGTTACGCGGAATGGAGTTCCGGTTTGACAGTGTTGCTGCTATTGCAGAAGGATTAGCATCTGTTTTTGGTCAACCATCTGTAGGTGCTAATATGTACTTGACACCACCAAATTCTCAGGGCTTGGCTTGTCACTATGATGACCACTGTGTGTTTGTATGCCAACTTGTTGGGACTAAGAAATGGAGAGTTTCTTCTCAGTCAAATGTTCAGTTACCTCGATTGTATGACCCTCTTGATAGCCTACATGGTTCAGAAGTTCAGAATTCAATGGGTGACTGCAAACAATATTTGCTTAGGGAAGGTGATATTTTGTATATCCCCAGAGGTGTTCTTCATGAGGCATGCACTGAGAATGTTAGTCTTGATGGGTCTGCTAGCTGTTCCTTACACATTACACTTGGTATCGAGGTTGAACCTCCTTTCGAGTGGGAAGGATTTGTTCATGTTGCATTCTTCAGTTGGTACCAGAAGCAAAAACAAGTTAACAATTCTTTTGAGTCTTCATCTGGAACCATTCATGATATATCTGCGAATCTCTTCCATGTTGCCATTGGGTTGCTAGGTGATTCTGATCCTACCTTTAGGAAGGCTTGCTTGGTTGCTTCAATCTTTTCCAGTTCACATACAAATAACTGGCTTGATTTAAACCAGAGAATCATCTTCTCTCAGCTGATTGATAAAATTAGTACTCAGACAAGGTTCTTGGAAATGTTCAGGAGCATAGAATTAGCAGTCCAGGAAAACAAGGATTCCTTACAACGAATTAAATGGCTCGGTTTTCTCAATCTGGATAAGGAAAGCAGTCTAAATCATGACCAGAATATGCCTTTCATGGGGATGAAAAATTTATTGTCATTATGTATTCAACACAAAGACAATGTAGAAGCTGCATTCCAGCAGCTTAAATCTGGGTTCTGTGAAAACGTGATATTTGAGGATGCAATAGTTAGTTATAAGTTACTGTTAGATAAATACAGGAATGTCAGAAAGCAGTATATGAATGGAATGGTTTCACTGCACCATCAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

760

Amino Acids

84.72

Weight (kDa)

6.61

Isoelectric Point (pI)

51.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC_2 PF08007 422 - 543 1.2e-21 JmjC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2205
AasI GACNNNNNNGTC 1 cut(s) 47
Acc65I GGTACC 1 cut(s) 1713
AccB1I GGYRCC 1 cut(s) 1713
AccBSI CCGCTC 1 cut(s) 156
AccII CGCG 2 cut(s) 228, 1257
AclWI GGATC 3 cut(s) 1175, 1188, 1817
AcoI YGGCCR 1 cut(s) 744
AcsI RAATTY 4 cut(s) 955, 1360, 1513, 2095
AcuI CTGAAG 2 cut(s) 1011, 1690
AcyI GRCGYC 2 cut(s) 42, 382
AdeI CACNNNGTG 1 cut(s) 1399
AfaI GTAC 3 cut(s) 1346, 1715, 1939
AfiI CCNNNNNNNGG 3 cut(s) 874, 1331, 2084
AflIII ACRYGT 1 cut(s) 820
AgsI TTSAA 7 cut(s) 450, 587, 1212, 1518, 1664, 1857, 2117
AjiI CACGTC 1 cut(s) 821
AjnI CCWGG 4 cut(s) 320, 700, 997, 1986
AjuI GAANNNNNNNTTGG 2 cut(s) 1829, 1861
AluBI AGCT 6 cut(s) 623, 908, 1629, 1921, 2138, 2152
AluI AGCT 6 cut(s) 623, 908, 1629, 1921, 2138, 2152
Alw21I GWGCWC 3 cut(s) 329, 365, 473
Alw26I GTCTC 4 cut(s) 337, 702, 783, 811
Alw44I GTGCAC 1 cut(s) 361
AlwI GGATC 3 cut(s) 1175, 1188, 1817
AlwNI CAGNNNCTG 1 cut(s) 464
Ama87I CYCGRG 2 cut(s) 257, 604
AoxI GGCC 2 cut(s) 744, 940
ApaLI GTGCAC 1 cut(s) 361
ApeKI GCWGC 5 cut(s) 12, 1170, 1286, 2138, 2149
ApoI RAATTY 4 cut(s) 955, 1360, 1513, 2095
Asp700I GAANNNNTTC 2 cut(s) 1787, 2260
Asp718I GGTACC 1 cut(s) 1713
AspLEI GCGC 3 cut(s) 12, 230, 1066
AspS9I GGNCC 1 cut(s) 941
AsuC2I CCSGG 2 cut(s) 605, 606
AsuHPI GGTGA 6 cut(s) 121, 190, 925, 1535, 1565, 1826
AsuNHI GCTAGC 1 cut(s) 1625
AvaI CYCGRG 2 cut(s) 257, 604
BaeGI GKGCMC 1 cut(s) 365
BamHI GGATCC 1 cut(s) 1180
BanI GGYRCC 1 cut(s) 1713
BanII GRGCYC 1 cut(s) 248
BbsI GAAGAC 3 cut(s) 63, 1007, 1743
Bbv12I GWGCWC 3 cut(s) 329, 365, 473
BbvI GCAGC 5 cut(s) 24, 1157, 1273, 2125, 2161
BccI CCATC 6 cut(s) 290, 517, 997, 1333, 1610, 2280
BceAI ACGGC 3 cut(s) 32, 59, 369
BcgI CGANNNNNNTGC 4 cut(s) 383, 417, 1088, 1122
BciT130I CCWGG 4 cut(s) 322, 702, 999, 1988
BcnI CCSGG 2 cut(s) 605, 606
BcoDI GTCTC 4 cut(s) 337, 702, 783, 811
BfaI CTAG 2 cut(s) 1626, 1811
BfmI CTRYAG 1 cut(s) 1329
BisI GCNGC 9 cut(s) 13, 45, 154, 231, 252, 1171, 1287, 2139, 2150
BlsI GCNGC 9 cut(s) 14, 46, 155, 232, 253, 1172, 1288, 2140, 2151
BmcAI AGTACT 1 cut(s) 1939
Bme1390I CCNGG 6 cut(s) 322, 605, 606, 702, 999, 1988
BmeT110I CYCGRG 2 cut(s) 257, 604
BmgBI CACGTC 1 cut(s) 821
BmgT120I GGNCC 1 cut(s) 941
BmiI GGNNCC 4 cut(s) 247, 1182, 1715, 1762
BmrFI CCNGG 6 cut(s) 322, 605, 606, 702, 999, 1988
BmrI ACTGGG 1 cut(s) 880
BmsI GCATC 3 cut(s) 1172, 1316, 2179
BmtI GCTAGC 1 cut(s) 1629
BmuI ACTGGG 1 cut(s) 880
BpiI GAAGAC 3 cut(s) 63, 1007, 1743
BpmI CTGGAG 1 cut(s) 304
Bpu10I CCTNAGC 1 cut(s) 1544
BpuMI CCSGG 2 cut(s) 605, 606
BsaBI GATNNNNATC 2 cut(s) 1306, 1821
BsaHI GRCGYC 2 cut(s) 42, 382
BsaJI CCNNGG 4 cut(s) 604, 701, 998, 1200
BsaWI WCCGGW 2 cut(s) 31, 1269
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 1256, 1286
Bsc4I CCNNNNNNNGG 3 cut(s) 874, 1331, 2084
Bse1I ACTGG 3 cut(s) 875, 1866, 1889
Bse3DI GCAATG 2 cut(s) 349, 675
Bse8I GATNNNNATC 2 cut(s) 1306, 1821
BseBI CCWGG 4 cut(s) 322, 702, 999, 1988
BseDI CCNNGG 4 cut(s) 604, 701, 998, 1200
BseGI GGATG 7 cut(s) 303, 532, 934, 1008, 1210, 2094, 2194
BseJI GATNNNNATC 2 cut(s) 1306, 1821
BseLI CCNNNNNNNGG 3 cut(s) 874, 1331, 2084
BseMI GCAATG 2 cut(s) 349, 675
BseMII CTCAG 6 cut(s) 828, 1379, 1460, 1590, 1931, 1955
BseNI ACTGG 3 cut(s) 875, 1866, 1889
BseRI GAGGAG 5 cut(s) 164, 173, 185, 910, 938
BseSI GKGCMC 1 cut(s) 365
BseXI GCAGC 5 cut(s) 24, 1157, 1273, 2125, 2161
BseYI CCCAGC 1 cut(s) 908
BsgI GTGCAG 1 cut(s) 2252
Bsh1236I CGCG 2 cut(s) 228, 1257
BshFI GGCC 2 cut(s) 746, 942
BshNI GGYRCC 1 cut(s) 1713
BsiHKAI GWGCWC 3 cut(s) 329, 365, 473
BsiHKCI CYCGRG 2 cut(s) 257, 604
BsiSI CCGG 3 cut(s) 32, 605, 1270
BslFI GGGAC 3 cut(s) 247, 621, 1435
BslI CCNNNNNNNGG 3 cut(s) 874, 1331, 2084
BsmAI GTCTC 4 cut(s) 337, 702, 783, 811
BsmBI CGTCTC 3 cut(s) 337, 783, 811
BsmFI GGGAC 3 cut(s) 247, 621, 1435
BsmI GAATGC 2 cut(s) 1700, 2141
BsnI GGCC 2 cut(s) 746, 942
BsoBI CYCGRG 2 cut(s) 257, 604
Bsp1286I GDGCHC 4 cut(s) 248, 329, 365, 473
Bsp143I GATC 3 cut(s) 390, 1180, 1822
BspANI GGCC 2 cut(s) 746, 942
BspCNI CTCAG 6 cut(s) 829, 1378, 1459, 1591, 1930, 1954
BspFNI CGCG 2 cut(s) 228, 1257
BspHI TCATGA 3 cut(s) 1585, 1768, 2062
BspLI GGNNCC 4 cut(s) 247, 1182, 1715, 1762
BspOI GCTAGC 1 cut(s) 1629
BspPI GGATC 3 cut(s) 1175, 1188, 1817
BspQI GCTCTTC 2 cut(s) 354, 411
BspT107I GGYRCC 1 cut(s) 1713
BsrBI CCGCTC 1 cut(s) 156
BsrDI GCAATG 2 cut(s) 349, 675
BsrI ACTGG 3 cut(s) 875, 1866, 1889
BssECI CCNNGG 4 cut(s) 604, 701, 998, 1200
BssMI GATC 3 cut(s) 390, 1180, 1822
BssNI GRCGYC 2 cut(s) 42, 382
Bst2UI CCWGG 4 cut(s) 322, 702, 999, 1988
Bst4CI ACNGT 7 cut(s) 466, 1157, 1238, 1246, 1280, 1397, 2214
Bst6I CTCTTC 4 cut(s) 354, 411, 1053, 1793
BstACI GRCGYC 2 cut(s) 42, 382
BstC8I GCNNGC 6 cut(s) 340, 621, 682, 1594, 1627, 1843
BstDEI CTNAG 9 cut(s) 837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
BstF5I GGATG 7 cut(s) 303, 532, 934, 1008, 1210, 2094, 2194
BstFNI CGCG 2 cut(s) 228, 1257
BstHHI GCGC 3 cut(s) 12, 230, 1066
BstKTI GATC 3 cut(s) 393, 1183, 1825
BstMAI GTCTC 4 cut(s) 337, 702, 783, 811
BstMBI GATC 3 cut(s) 390, 1180, 1822
BstMWI GCNNNNNNNGC 7 cut(s) 218, 227, 293, 344, 629, 790, 1292
BstNI CCWGG 4 cut(s) 322, 702, 999, 1988
BstNSI RCATGY 1 cut(s) 1596
BstSCI CCNGG 6 cut(s) 320, 603, 604, 700, 997, 1986
BstSFI CTRYAG 1 cut(s) 1329
BstSLI GKGCMC 1 cut(s) 365
BstUI CGCG 2 cut(s) 228, 1257
BstV1I GCAGC 5 cut(s) 24, 1157, 1273, 2125, 2161
BstV2I GAAGAC 3 cut(s) 63, 1007, 1743
BstX2I RGATCY 1 cut(s) 1180
BstXI CCANNNNNNTGG 1 cut(s) 1418
BstYI RGATCY 1 cut(s) 1180
BsuRI GGCC 2 cut(s) 746, 942
BtgZI GCGATG 1 cut(s) 268
BtrI CACGTC 1 cut(s) 821
BtsCI GGATG 7 cut(s) 303, 532, 934, 1008, 1210, 2094, 2194
BtsI GCAGTG 1 cut(s) 2264
BtsIMutI CAGTG 8 cut(s) 58, 834, 868, 957, 1285, 1393, 1596, 2264
Cac8I GCNNGC 6 cut(s) 340, 621, 682, 1594, 1627, 1843
CaiI CAGNNNCTG 1 cut(s) 464
CciI TCATGA 3 cut(s) 1585, 1768, 2062
CfoI GCGC 3 cut(s) 12, 230, 1066
Cfr13I GGNCC 1 cut(s) 941
Cfr9I CCCGGG 1 cut(s) 604
CseI GACGC 4 cut(s) 50, 302, 390, 765
Csp6I GTAC 3 cut(s) 1345, 1714, 1938
CviQI GTAC 3 cut(s) 1345, 1714, 1938
DdeI CTNAG 9 cut(s) 837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
DpnI GATC 3 cut(s) 392, 1182, 1824
DpnII GATC 3 cut(s) 390, 1180, 1822
DraI TTTAAA 1 cut(s) 1896
DraIII CACNNNGTG 1 cut(s) 1399
DrdI GACNNNNNNGTC 1 cut(s) 47
DseDI GACNNNNNNGTC 1 cut(s) 47
EaeI YGGCCR 1 cut(s) 744
Eam1104I CTCTTC 4 cut(s) 354, 411, 1053, 1793
EarI CTCTTC 4 cut(s) 354, 411, 1053, 1793
EciI GGCGGA 4 cut(s) 76, 140, 238, 325
Eco24I GRGCYC 1 cut(s) 248
Eco57I CTGAAG 2 cut(s) 1011, 1690
Eco88I CYCGRG 2 cut(s) 257, 604
EcoRI GAATTC 1 cut(s) 1513
EcoRII CCWGG 4 cut(s) 320, 700, 997, 1986
EcoT38I GRGCYC 1 cut(s) 248
Esp3I CGTCTC 3 cut(s) 337, 783, 811
FalI AAGNNNNNCTT 4 cut(s) 1829, 1861, 1988, 2020
FaqI GGGAC 3 cut(s) 247, 621, 1435
FauI CCCGC 2 cut(s) 209, 233
Fnu4HI GCNGC 9 cut(s) 13, 45, 154, 231, 252, 1171, 1287, 2139, 2150
FokI GGATG 7 cut(s) 290, 539, 941, 1015, 1217, 2101, 2201
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 9 cut(s) 13, 45, 154, 231, 252, 1171, 1287, 2139, 2150
FspBI CTAG 2 cut(s) 1626, 1811
GlaI GCGC 3 cut(s) 11, 229, 1065
GluI GCNGC 9 cut(s) 13, 45, 154, 231, 252, 1171, 1287, 2139, 2150
GsaI CCCAGC 1 cut(s) 912
GsuI CTGGAG 1 cut(s) 304
HaeIII GGCC 2 cut(s) 746, 942
HapII CCGG 3 cut(s) 32, 605, 1270
HgaI GACGC 4 cut(s) 50, 302, 390, 765
HhaI GCGC 3 cut(s) 12, 230, 1066
Hin1I GRCGYC 2 cut(s) 42, 382
Hin6I GCGC 3 cut(s) 10, 228, 1064
HinP1I GCGC 3 cut(s) 10, 228, 1064
HincII GTYRAC 2 cut(s) 1322, 1735
HindII GTYRAC 2 cut(s) 1322, 1735
HindIII AAGCTT 1 cut(s) 621
HpaI GTTAAC 1 cut(s) 1735
HpaII CCGG 3 cut(s) 32, 605, 1270
HphI GGTGA 6 cut(s) 121, 190, 925, 1535, 1565, 1826
Hpy166II GTNNAC 6 cut(s) 363, 499, 1153, 1322, 1735, 1871
Hpy8I GTNNAC 6 cut(s) 363, 499, 1153, 1322, 1735, 1871
Hpy99I CGWCG 4 cut(s) 44, 296, 384, 415
HpyAV CCTTC 9 cut(s) 79, 169, 984, 1004, 1126, 1292, 1544, 1676, 1831
HpyCH4III ACNGT 7 cut(s) 466, 1157, 1238, 1246, 1280, 1397, 2214
HpyCH4IV ACGT 2 cut(s) 820, 2175
HpyF10VI GCNNNNNNNGC 7 cut(s) 218, 227, 293, 344, 629, 790, 1292
HpyF3I CTNAG 9 cut(s) 837, 1193, 1365, 1425, 1446, 1544, 1599, 1917, 1941
HpySE526I ACGT 2 cut(s) 820, 2175
Hsp92I GRCGYC 2 cut(s) 42, 382
HspAI GCGC 3 cut(s) 10, 228, 1064
KpnI GGTACC 1 cut(s) 1717
KspAI GTTAAC 1 cut(s) 1735
Kzo9I GATC 3 cut(s) 390, 1180, 1822
LguI GCTCTTC 2 cut(s) 354, 411
LmnI GCTCC 5 cut(s) 161, 251, 332, 965, 1968
Lsp1109I GCAGC 5 cut(s) 24, 1157, 1273, 2125, 2161
LweI GCATC 3 cut(s) 1172, 1316, 2179
MaeI CTAG 2 cut(s) 1626, 1811
MaeII ACGT 2 cut(s) 820, 2175
MaeIII GTNAC 9 cut(s) 460, 578, 672, 787, 1251, 1379, 1461, 1523, 2208
MalI GATC 3 cut(s) 392, 1182, 1824
MbiI CCGCTC 1 cut(s) 156
MboI GATC 3 cut(s) 390, 1180, 1822
MfeI CAATTG 2 cut(s) 590, 2276
MflI RGATCY 1 cut(s) 1180
MhlI GDGCHC 4 cut(s) 248, 329, 365, 473
MlyI GAGTC 4 cut(s) 104, 269, 848, 1757
MmeI TCCRAC 4 cut(s) 63, 315, 355, 434
MroXI GAANNNNTTC 2 cut(s) 1787, 2260
MseI TTAA 7 cut(s) 519, 1037, 1116, 1734, 1895, 2016, 2154
MslI CAYNNNNRTG 2 cut(s) 1386, 2087
MspA1I CMGCKG 2 cut(s) 908, 1921
MspI CCGG 3 cut(s) 32, 605, 1270
MspR9I CCNGG 6 cut(s) 322, 605, 606, 702, 999, 1988
MunI CAATTG 2 cut(s) 590, 2276
Mva1269I GAATGC 2 cut(s) 1700, 2141
MvaI CCWGG 4 cut(s) 322, 702, 999, 1988
MvnI CGCG 2 cut(s) 228, 1257
MwoI GCNNNNNNNGC 7 cut(s) 218, 227, 293, 344, 629, 790, 1292
NciI CCSGG 2 cut(s) 605, 606
NdeII GATC 3 cut(s) 390, 1180, 1822
NheI GCTAGC 1 cut(s) 1625
NlaIV GGNNCC 4 cut(s) 247, 1182, 1715, 1762
NmeAIII GCCGAG 2 cut(s) 760, 1225
NmuCI GTSAC 5 cut(s) 578, 672, 787, 1379, 1523
NspI RCATGY 1 cut(s) 1596
PaeI GCATGC 1 cut(s) 1596
PaeR7I CTCGAG 1 cut(s) 257
PagI TCATGA 3 cut(s) 1585, 1768, 2062
PciSI GCTCTTC 2 cut(s) 354, 411
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 2 cut(s) 1700, 2141
PdmI GAANNNNTTC 2 cut(s) 1787, 2260
PfeI GAWTC 9 cut(s) 35, 415, 544, 643, 692, 1783, 1817, 1905, 2000
PfoI TCCNGGA 1 cut(s) 1986
PkrI GCNGC 9 cut(s) 14, 46, 155, 232, 253, 1172, 1288, 2140, 2151
PleI GAGTC 4 cut(s) 104, 268, 847, 1756
PpsI GAGTC 4 cut(s) 104, 268, 847, 1756
PsiI TTATAA 1 cut(s) 2205
Psp6I CCWGG 4 cut(s) 320, 700, 997, 1986
PspFI CCCAGC 1 cut(s) 908
PspGI CCWGG 4 cut(s) 320, 700, 997, 1986
PspN4I GGNNCC 4 cut(s) 247, 1182, 1715, 1762
PspPI GGNCC 1 cut(s) 941
PspXI VCTCGAGB 1 cut(s) 257
PstNI CAGNNNCTG 1 cut(s) 464
PsuI RGATCY 1 cut(s) 1180
PvuII CAGCTG 2 cut(s) 908, 1921
RsaI GTAC 3 cut(s) 1346, 1715, 1939
RsaNI GTAC 3 cut(s) 1345, 1714, 1938
RseI CAYNNNNRTG 2 cut(s) 1386, 2087
SapI GCTCTTC 2 cut(s) 354, 411
SaqAI TTAA 7 cut(s) 519, 1037, 1116, 1734, 1895, 2016, 2154
SatI GCNGC 9 cut(s) 13, 45, 154, 231, 252, 1171, 1287, 2139, 2150
Sau3AI GATC 3 cut(s) 390, 1180, 1822
Sau96I GGNCC 1 cut(s) 941
ScaI AGTACT 1 cut(s) 1939
SchI GAGTC 4 cut(s) 104, 269, 848, 1757
ScrFI CCNGG 6 cut(s) 322, 605, 606, 702, 999, 1988
SduI GDGCHC 4 cut(s) 248, 329, 365, 473
SfaNI GCATC 3 cut(s) 1172, 1316, 2179
SfcI CTRYAG 1 cut(s) 1329
Sfr274I CTCGAG 1 cut(s) 257
SlaI CTCGAG 1 cut(s) 257
SmaI CCCGGG 1 cut(s) 606
SmiMI CAYNNNNRTG 2 cut(s) 1386, 2087
SmlI CTYRAG 1 cut(s) 257
SmoI CTYRAG 1 cut(s) 257
SphI GCATGC 1 cut(s) 1596
SspI AATATT 2 cut(s) 446, 1538
SspMI CTAG 2 cut(s) 1626, 1811
StyD4I CCNGG 6 cut(s) 320, 603, 604, 700, 997, 1986
TaaI ACNGT 7 cut(s) 466, 1157, 1238, 1246, 1280, 1397, 2214
TaiI ACGT 2 cut(s) 823, 2178
TaqI TCGA 7 cut(s) 258, 267, 354, 393, 1468, 1656, 1674
TatI WGTACW 2 cut(s) 1344, 1937
TauI GCSGC 4 cut(s) 47, 156, 233, 254
TfiI GAWTC 9 cut(s) 35, 415, 544, 643, 692, 1783, 1817, 1905, 2000
Tru1I TTAA 7 cut(s) 519, 1037, 1116, 1734, 1895, 2016, 2154
Tru9I TTAA 7 cut(s) 519, 1037, 1116, 1734, 1895, 2016, 2154
TscAI CASTG 8 cut(s) 58, 841, 875, 957, 1285, 1400, 1603, 2271
TseFI GTSAC 5 cut(s) 578, 672, 787, 1379, 1523
TseI GCWGC 5 cut(s) 12, 1170, 1286, 2138, 2149
Tsp45I GTSAC 5 cut(s) 578, 672, 787, 1379, 1523
TspDTI ATGAA 9 cut(s) 287, 543, 1574, 1682, 1743, 1757, 2071, 2105, 2264
TspGWI ACGGA 2 cut(s) 40, 319
TspMI CCCGGG 1 cut(s) 604
TspRI CASTG 8 cut(s) 58, 841, 875, 957, 1285, 1400, 1603, 2271
VneI GTGCAC 1 cut(s) 361
XapI RAATTY 4 cut(s) 955, 1360, 1513, 2095
XceI RCATGY 1 cut(s) 1596
XcmI CCANNNNNNNNNTGG 1 cut(s) 1799
XhoI CTCGAG 1 cut(s) 257
XmaI CCCGGG 1 cut(s) 604
XmnI GAANNNNTTC 2 cut(s) 1787, 2260
XspI CTAG 2 cut(s) 1626, 1811
ZrmI AGTACT 1 cut(s) 1939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.