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| Species | Orthologous Gene IDs |
|---|---|
| rosa_rugosa | Rorug04G0089900 |
| rosa_samantha | Rh1AG149700 Rh2DG289000 Rh3DG187200 Rh3DG218600 Rh4AG030300 Rh4AG153600 Rh4CG032700 Rh4DG147000 Rh5BG168800 Rh5BG462800 Rh5CG120200 Rh5DG107200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 89 |
| AccI | GTMKAC | 1 cut(s) | 135 |
| AciI | CCGC | 2 cut(s) | 155, 179 |
| AjiI | CACGTC | 1 cut(s) | 139 |
| AluBI | AGCT | 1 cut(s) | 238 |
| AluI | AGCT | 1 cut(s) | 238 |
| Alw26I | GTCTC | 3 cut(s) | 33, 94, 208 |
| AoxI | GGCC | 1 cut(s) | 242 |
| AspLEI | GCGC | 1 cut(s) | 184 |
| AspS9I | GGNCC | 2 cut(s) | 82, 242 |
| AsuHPI | GGTGA | 3 cut(s) | 79, 175, 217 |
| AvaII | GGWCC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 193 |
| BcoDI | GTCTC | 3 cut(s) | 33, 94, 208 |
| BfaI | CTAG | 2 cut(s) | 86, 224 |
| BfoI | RGCGCY | 1 cut(s) | 185 |
| BfuAI | ACCTGC | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme18I | GGWCC | 1 cut(s) | 82 |
| BmgBI | CACGTC | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 2 cut(s) | 82, 242 |
| BsaI | GGTCTC | 1 cut(s) | 33 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 66, 96 |
| BseMII | CTCAG | 2 cut(s) | 105, 203 |
| BshFI | GGCC | 1 cut(s) | 244 |
| BsmAI | GTCTC | 3 cut(s) | 33, 94, 208 |
| BsnI | GGCC | 1 cut(s) | 244 |
| Bso31I | GGTCTC | 1 cut(s) | 33 |
| Bsp143I | GATC | 1 cut(s) | 36 |
| BspACI | CCGC | 2 cut(s) | 155, 179 |
| BspANI | GGCC | 1 cut(s) | 244 |
| BspCNI | CTCAG | 2 cut(s) | 104, 204 |
| BspMI | ACCTGC | 1 cut(s) | 89 |
| BspTNI | GGTCTC | 1 cut(s) | 33 |
| BssMI | GATC | 1 cut(s) | 36 |
| Bst6I | CTCTTC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 3 cut(s) | 91, 212, 229 |
| BstH2I | RGCGCY | 1 cut(s) | 185 |
| BstHHI | GCGC | 1 cut(s) | 184 |
| BstKTI | GATC | 1 cut(s) | 39 |
| BstMAI | GTCTC | 3 cut(s) | 33, 94, 208 |
| BstMBI | GATC | 1 cut(s) | 36 |
| BsuRI | GGCC | 1 cut(s) | 244 |
| BtgZI | GCGATG | 1 cut(s) | 212 |
| BtrI | CACGTC | 1 cut(s) | 139 |
| BveI | ACCTGC | 1 cut(s) | 89 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| CfoI | GCGC | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 2 cut(s) | 82, 242 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 108, 143 |
| CviAII | CATG | 1 cut(s) | 172 |
| CviJI | RGCY | 4 cut(s) | 211, 228, 238, 244 |
| CviKI_1 | RGCY | 4 cut(s) | 211, 228, 238, 244 |
| DdeI | CTNAG | 3 cut(s) | 91, 212, 229 |
| DpnI | GATC | 1 cut(s) | 38 |
| DpnII | GATC | 1 cut(s) | 36 |
| Eam1104I | CTCTTC | 1 cut(s) | 10 |
| EarI | CTCTTC | 1 cut(s) | 10 |
| Eco31I | GGTCTC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 1 cut(s) | 82 |
| FaeI | CATG | 1 cut(s) | 175 |
| FaiI | YATR | 1 cut(s) | 173 |
| FatI | CATG | 1 cut(s) | 171 |
| FblI | GTMKAC | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 2 cut(s) | 86, 224 |
| GlaI | GCGC | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeII | RGCGCY | 1 cut(s) | 185 |
| HaeIII | GGCC | 1 cut(s) | 244 |
| HhaI | GCGC | 1 cut(s) | 184 |
| Hin1II | CATG | 1 cut(s) | 175 |
| Hin6I | GCGC | 1 cut(s) | 182 |
| HinP1I | GCGC | 1 cut(s) | 182 |
| HinfI | GANTC | 1 cut(s) | 216 |
| HphI | GGTGA | 3 cut(s) | 79, 175, 217 |
| Hpy166II | GTNNAC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 1 cut(s) | 94 |
| Hpy8I | GTNNAC | 1 cut(s) | 136 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 3 cut(s) | 91, 212, 229 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| Hsp92II | CATG | 1 cut(s) | 175 |
| HspAI | GCGC | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 36 |
| LmnI | GCTCC | 1 cut(s) | 235 |
| LpnPI | CCDG | 4 cut(s) | 47, 84, 137, 201 |
| MaeI | CTAG | 2 cut(s) | 86, 224 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MaeIII | GTNAC | 2 cut(s) | 115, 163 |
| MalI | GATC | 1 cut(s) | 38 |
| MboI | GATC | 1 cut(s) | 36 |
| MboII | GAAGA | 1 cut(s) | 27 |
| MlyI | GAGTC | 1 cut(s) | 210 |
| MnlI | CCTC | 2 cut(s) | 88, 201 |
| NdeII | GATC | 1 cut(s) | 36 |
| NlaIII | CATG | 1 cut(s) | 175 |
| NmuCI | GTSAC | 2 cut(s) | 115, 163 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| PspPI | GGNCC | 2 cut(s) | 82, 242 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau3AI | GATC | 1 cut(s) | 36 |
| Sau96I | GGNCC | 2 cut(s) | 82, 242 |
| SchI | GAGTC | 1 cut(s) | 210 |
| SetI | ASST | 3 cut(s) | 103, 141, 240 |
| SinI | GGWCC | 1 cut(s) | 82 |
| SsiI | CCGC | 2 cut(s) | 155, 179 |
| SspMI | CTAG | 2 cut(s) | 86, 224 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TauI | GCSGC | 1 cut(s) | 182 |
| TseFI | GTSAC | 2 cut(s) | 115, 163 |
| Tsp45I | GTSAC | 2 cut(s) | 115, 163 |
| TspDTI | ATGAA | 1 cut(s) | 160 |
| VpaK11BI | GGWCC | 1 cut(s) | 82 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 154 |
| XmiI | GTMKAC | 1 cut(s) | 135 |
| XspI | CTAG | 2 cut(s) | 86, 224 |