Transcription initiation factor TFIID subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02680 |
| fragaria_vesca | FvH4_5g39500 FvH4_6g14960 |
| malus_domestica | MD02G1287100.v1.1 MD02G1287200.v1.1 |
| prunus_persica | Prupe.2G036200_v2.0.a1 |
| pyrus_communis | pycom02g24340 |
| rosa_chinensis | RchiOBHm_Chr4g0410491 RchiOBHm_Chr7g0241821 |
| rosa_laevigata | RLG00000000541 RLG00000008420 |
| rosa_multiflora | Rmu_co8297743.1_g000001 Rmu_sc0001865.1_g000010 Rmu_sc0007471.1_g000001 Rmu_sc0016181.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00218640 Rroxscaffold_5G00355320 |
| rosa_rugosa | Rorug04G0114100 Rorug07G0347400 Rorug07G0347500 |
| rosa_samantha | Rh4AG161000 Rh4BG160600 Rh4CG173300 Rh4DG156600 Rh7AG501800 Rh7BG473200 Rh7CG518300 Rh7DG487100 |
| rosa_wichuraiana | Rw4G013450 Rw7G042420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 1 cut(s) | 43 |
| BaeGI | GKGCMC | 1 cut(s) | 210 |
| BmiI | GGNNCC | 2 cut(s) | 144, 198 |
| BpmI | CTGGAG | 1 cut(s) | 183 |
| BsaAI | YACGTR | 1 cut(s) | 95 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BseRI | GAGGAG | 1 cut(s) | 155 |
| BseSI | GKGCMC | 1 cut(s) | 210 |
| BslFI | GGGAC | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BsmFI | GGGAC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 1 cut(s) | 210 |
| BspCNI | CTCAG | 1 cut(s) | 62 |
| BspLI | GGNNCC | 2 cut(s) | 144, 198 |
| Bst4CI | ACNGT | 2 cut(s) | 178, 212 |
| Bst6I | CTCTTC | 3 cut(s) | 56, 97, 239 |
| BstBAI | YACGTR | 1 cut(s) | 95 |
| BstDEI | CTNAG | 1 cut(s) | 49 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 116 |
| BstSLI | GKGCMC | 1 cut(s) | 210 |
| BstSNI | TACGTA | 1 cut(s) | 95 |
| BtsIMutI | CAGTG | 1 cut(s) | 208 |
| CviJI | RGCY | 2 cut(s) | 145, 197 |
| CviKI_1 | RGCY | 2 cut(s) | 145, 197 |
| DdeI | CTNAG | 1 cut(s) | 49 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 3 cut(s) | 56, 97, 239 |
| EarI | CTCTTC | 3 cut(s) | 56, 97, 239 |
| Eco105I | TACGTA | 1 cut(s) | 95 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 116 |
| FaiI | YATR | 4 cut(s) | 150, 158, 164, 222 |
| FaqI | GGGAC | 1 cut(s) | 82 |
| GsuI | CTGGAG | 1 cut(s) | 183 |
| HinfI | GANTC | 2 cut(s) | 10, 185 |
| HphI | GGTGA | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 1 cut(s) | 52 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 200 |
| HpyAV | CCTTC | 3 cut(s) | 31, 126, 197 |
| HpyCH4III | ACNGT | 2 cut(s) | 178, 212 |
| HpyCH4IV | ACGT | 1 cut(s) | 94 |
| HpyF3I | CTNAG | 1 cut(s) | 49 |
| HpySE526I | ACGT | 1 cut(s) | 94 |
| LmnI | GCTCC | 2 cut(s) | 142, 202 |
| LpnPI | CCDG | 1 cut(s) | 213 |
| MaeII | ACGT | 1 cut(s) | 94 |
| MaeIII | GTNAC | 1 cut(s) | 44 |
| MboII | GAAGA | 5 cut(s) | 46, 73, 114, 209, 226 |
| MhlI | GDGCHC | 1 cut(s) | 210 |
| MmeI | TCCRAC | 1 cut(s) | 197 |
| MnlI | CCTC | 4 cut(s) | 22, 57, 133, 242 |
| MseI | TTAA | 1 cut(s) | 116 |
| NlaIV | GGNNCC | 2 cut(s) | 144, 198 |
| PfeI | GAWTC | 2 cut(s) | 10, 185 |
| Ppu21I | YACGTR | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 2 cut(s) | 144, 198 |
| SaqAI | TTAA | 1 cut(s) | 116 |
| SduI | GDGCHC | 1 cut(s) | 210 |
| SetI | ASST | 6 cut(s) | 33, 42, 46, 97, 137, 234 |
| SgeI | CNNG | 3 cut(s) | 84, 194, 212 |
| SnaBI | TACGTA | 1 cut(s) | 95 |
| TaaI | ACNGT | 2 cut(s) | 178, 212 |
| TaiI | ACGT | 1 cut(s) | 97 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TfiI | GAWTC | 2 cut(s) | 10, 185 |
| Tru1I | TTAA | 1 cut(s) | 116 |
| Tru9I | TTAA | 1 cut(s) | 116 |
| TscAI | CASTG | 1 cut(s) | 215 |
| TspDTI | ATGAA | 3 cut(s) | 151, 177, 209 |
| TspRI | CASTG | 1 cut(s) | 215 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 116 |