Rorug04G0207100

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
36048306 .. 36069117
20812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0207100.1

Sequence Viewer

Length: 8529 bp
ATGGCCGGTTACCCTCATCACTTCCGCCCCTCCAGTGGGGACTGGAACTGGGCACACCCACCTCCTCACCTCTCCCACCCACAATTTCCTTACCCCAATTTTCCTCCCCAAAACCCCACCAATTTAAACATCTATCCCCCTCAACCTTCCGCCTTTCCACCACCGCAACCGCAACCGCCGCCGCCGCCGCAACCGTCAAACCCTAATTTCCACCTCCAACACCCTACAGATGTCAATATCTTTCCCGCCAACCACTATGGACACTCCTCATTTTCCAATTACTACCCAACCCCAAGCTCTAATTTCTCTCTGCAAAACCCTAACCCCACTCCACCCTTCCCCCCTCAGAGCTTCTCCCGTAACCCTAACGAGGCGCCCGACCCGCCGAACCTCTCGAATTCGGCTAGGCATTTGCCTGAGGGCCCGAGAGAGGTGCTCGAGAAGATCGACCGTGCGGTGGAGAAGCTTCGCGACGAGCTTGTCGCCGCCGGGAAGAACGTCTCGGCCTGGAAGGTGTTACAGTCTGCGCTTCTGATGCTCAATGTTGATGCCGAGACTTGTTTGGGCCTCAAAGTTGAGCAAGTGCCGTCTCTTCACCGCCTCATGGTCACTGAAGGAAGGATAAATGCATTTATTCATTGCTTTGTTGGAGTTCGAACAATTACATCTTTGTATGATTTGGAAGTTGCAATCTGCAAGAATGAGGATATTGAGCAGTTTGAAGAGCTTGGATTGGGTCCTTTGTTGAAACACCCACTAGTTTTGCAATATTTCTCGGTGGATTCTGAAACAACTGAAGTCTGTAAGATATCTAGTGAGGAGATACTACATTTACTCAGTAGGTACCTAAAGAAGCCGAAAGTTAAGGAAAATTCTGTTGAGGGGTTCTTGGACTTCATTGTTACGAAGCGACCTGTTGCAGGCAAGGAAAAGCTTGGAATTCGAATATTTAGTTTGGGGGTGCATGCTTCTGCTATGCGTGAAGCCAAGGCTTCAGAACGTGCAGCTTTATGGAAATCATTACAGGAATTAAAACAAAAGTCTCCCAAAATATCTAGGAGGAAGGCACCAATTTTCTCCTCGCTGAAAAATCGGCTAGATAAACATTTTCGCGCCATTTCGCAGCAATCTGGATTGTGTTCTGTTGTGAATGGAAAGGAAGATACACTTGTTTCTTCAAGATCAAAGGATGAAGGTATTAATGATTATTTACATGATGACAAAGGTAATGACCATGGTACTGGTGGTCATATTGACTCACTAAAATCCCTGAAAAGTTCTGACAGAGAGGGTAAGTGTTCTTACTTGTCTGAAGTGGAGGAGAGGTCTTCGCTCATGTCAAACCACCCTTCTCCAAGCCAAAAGCATAATGAGAGTAATGGGTCAGTTAAAAAGAAAAGAAAATATGAAAATCTAAGCTGCCCTATTTCTGTTCCCTCAAAGTTGAGCAAGAGAGAGAAGGTAGAGCAAGATGCTCTTCCTACAGAAAGTGACAGTGAAACTAAGGAGGTCAGCGAGATGCTTAAACTTGATCTTTCAATTGCCAATAATCTTTTGAGGATGTTCATTACAACTTGGAAGGAGGCATGTAGGGAGCAGCCTGTGGCTGAGGTACTTTGGGCCATGCTTCGCTCTTGTAATACAAAATATAGGAGGACAAAGAGAATCATGGCAATGTTTTCGACATACCCTTTGGTTGGATTACTCAATGTTGCCGTCTCATCTATCAAATGTGGAATGTGGGATAATATGTTTGATACGTCCCAAACCATTAGTCCACGTGAGTTGGCTAACACTGTAACTGATAATTATCCTGAACATGTCGAACAAAGTATAAAGGATGCACCACCAGTCAGCACCGAACATGCTACCGAACATGGACAAACCTCTTGCTGCCTGAAGCCAAATCATCAGGATCGTCCACGTCGGTGGAGGAAGATCCCAAGGAGTCGTAAGAAGTTGGAGCCTGAAAACGGACACATCTGCTACCTTTGTCATCAAGAGGGACATGTCAAGAGAAGATGCCCTCTGTGGCAGCAAACTAAAAAATCATCATATGAACCACAGAGTCCTCAACAATTGGCTCAGTATTCTATTTCCGGAGAAGAGGTGGAGGAGAAAGTCAGTGCTGTGGTGGACGGTGTTTCAGTTAAAGAGATAATCAGGAAAGTTGCTACATATTTTGAGACTGATCACGGAATGTCTAGCAATGGTAAATCACTTCCGGAGAAGATATTTATTTACTTCAGAAAGCTTTGCAATTGTGAGCTCTGGTTGACTGAAGAATTTTCTGTCAAGGAATTTAGATCCCTTGGTTATGGGGAATTTATGATGTTTTTAGAAAAGTATGCCCGTCTTCTGCCACCGGAGATGTGCAAGTTCTTGAAAGATGACAGCAGTGGAAAGTTTCCTTTGGAGGTTTGCATGCTTCCGCATTATTTAGTTGTTTTGGTATCTCAAGCTTTAAACAATTTATGGGAGGACCAAAATATTACCAAACTGAACATTTCTTCTCTGCTTGGGAAGCAGTTCCCGGCCCTTAGTTTCCATACCATTGAAAATGGTTCAGTAGAAGACTTTAAAAGTATAGTAGGAAAGCATAAAGACACTGCAATTTCCAAATGTGTACTATTTTCAATGACAATATGCGGAACTAGTTACACTCTAGAATCATTGGAAAACTGTAGTAAGAATGCTGTATTGAAAAGCAGTTTGGTGAGTGTTAACAGTGACCAGAAAATAAGCATTCAATCTGTTGCATCCAAGGAGGCAATTGCAGTCTTACTTAGGGCACCCATGATGTCAGATTTGAATTTATGGTCACATTGGGACCTCTTATTTGCTCCCTCTCTTGGCCCTCTTGTACCGTGGTTATTGAATGAAGTCAACACAGATGAATTACTCTGTTTGGTAACCAAAGATGGCAAAGTTATTCGGTTAGATCATTCAGCTACTGTAGATTCATTCTCGAAAGCTGCTCTTCAAGGATCCTCTTTTCAAACAGCAGTGAAAATGTTATCTCTCTTTTCACTGGTTGGGGGAGAAAAACATGTCCCCGTGTCCCTTTTGAAATTCCATGTACAGCGTGCATTTGAAGTTATTTTCAAGACCTATCTAGATGGTATGGAAGTATATGACAAGAAGAGTTCTCTTAATCAAGGAACAGTTTTGTGTGGACAGAAAATGGTTGTTGAAATTGCTGCTGGTAAATGCAGTAACTTACACAGAGCTGTAACGCAGACGAAAATTGCTGAGTCTGTTATATCACATTTTTTTCTTGATTGCCTGGGGTATCTACCTGCAGAGTTTCGCAGTTTTGCTGCTGATGTGTTACTTTCTGGGATGCGGTCTGTTTTTAAGCATGCGGCTTCAGCCATTTTGGATGAATGCATCCAAATAGAGCAGCGTCTCATACTTCATGAAGTTGGCTTATCTCTTGGTATAGTGGAGTGGATTAGTGATTACCATGTATTTAGTTCCTTGGATTCTACTGATTCGTTCATGTCTGAGGATTCTGGTCTCAATGCTGATAGAGATCAAATGGGGTCAGACTCAAAATATATGCAAAATGTGTCAAAAAAGTTGGCTGCTTCTGAACAGAGTATGGCTGCATCTGTTAGGGCAGTTGAGCATAAAGGAGGATGTGCTGATGTTAGCCGGATGGTTGATGGTGCAGGAGTTTCTGATGCTGGGATTGGCATTGGCATTGGTTACAGACAACATCCTACTAATATTAATGAACATGAAGATGCTTTCCAGGTTATTGAGTCAATCAGGAGAGATGAATTCGGTTTGGATTCAAGCCCATTGACCTTTGAAAGTATCGTCTTAAAGAAACAGCATGCTCGCTTAGGGAGAGCTCTGCACTGTCTTTCACAGGAATTATATTCTCAAGATTCTCATTTTCTTCTTGAGCTGGTTCAAAATGCTGATGATAATACTTATCCAACAAATATAGAACCAACTCTAGCATTCATTCTTCAAGAATCAGGTATTGTTGTTTTGAATAATGAGCAAGGCTTCTCTGCCCAGAACATTAGAGCACTTTGTGATGTTGGAAATTCAACCAAGAAAGGATCCAGTGCCGGATATATAGGGCAAAAGGGCATCGGTTTCAAATCAGTATTTCGTGTCACAGATGCTCCAGAAATTCATTCTAATGGATTTCATATCAAGTTTGATACAAGTGAGGGTCAGATTGGTTTAATTCTGCCCACAGTTGTACCTCCTTGCAATCTTGAGTTGTTTAGACAGCTGACATCTAGTGACATTGATAAACCAGATTGTTACTGCTGGAAAACTTGTATTGTTCTTCCTTTCAGATCGAAAGTATCAGATGGAACTGTCTTGAACCACATAATGAATATGTTTTCAGATCTTCATCCATCTTTACTACTATTTCTTCACCGCCTCAAGTGTATCCGGTTTAGAAACCTAATCGATGATTCACTTACTGTCATGAGAAAAGAAATTGTAGGAGACGGTATTGTCAAGGTTTCACATGGGAATACGAAGATGACATGGTTTGTAGTATCTCAGAAATTGCACTCAGATAATCTTCGTAGTGATGTGCAAACAACAGAAATCTCAATTGCTTTTACATTGAAGGAATCGGATAAGGGCATTTATCGTCCAGATATAGGCCAACAGCCTGTGTTTGCATTTCTTCCTCTTAGAACATACGGACTGAAATTTATTGTTCAGGGTGATTTTGTTCTTCCTTCATCCAGAGAGGAGGTGGATGGAGATAGTCCCTGGAACCAATGGCTATTGTCAGAATTTCCTGGTTTCTTTGTCGATGCAGAGAAATCATTTTGTTCTCTTCCATGTTTCAAAGAGAATCCTGGGACTGCTGTGGCAGCTTACATGTCCTTTGTTCCACTTGTTGGGGAAGTGCATGGTTTCTTTTCTTCTCTTCCTCGATTAATTATTTCTAAATTACGGATGTCAAATTGCTTTCTTCAGGAAGGAGAAAAGAAAGAATGGGTTCCTCCTTGCAAGGTCCTAAGAAATTGGAGTAAACAGGCTCGTTCACTTCTCCCTGATGGTCTACTGCATGAGCATCTTGGCCTTGGATTCTTGGATAAAGATATAGTTCTGCCTGATCCACTTGCAAGAGTTCTAGGTATTGCAGAGTATGGGCCCACAGTTCTGCTTCAGGTAATGGCTTCTTTATGTGGTAAGCAGGATGGCCTCAAATCAATGGGAATGGGTTGGATGGCCTCTTTGCTTAGTGAACTTTATGCAATGTCATTCAAATCTTCTGTTGAAACTTCCTTTGATTCTGGAATAGAAATGGGATTCCTAGAAAAACTTCAAAAAATTCCATTCATACCTCTTTCAGATGGTACATATGGTGCAGTTGTTGAAGGCCCAATTTGGCTACAGTTTGATGCCGTTGGGACTGGTTTTGGGGATCATCATGGACTTGAATCTTTTCCAAAGTTATATGCTAAACTTCGGATTGTAAGTCCGGAGCTCTATGCATCGTCTGCTGATATGCCATCCATGGATGTGACGCCGATTGACAAAGTCATTAGTATGCTCCATAGAATTGGTGTCCAACGGTTGTCCGCACACGAGATTCTCAAGGCTCACATCTTGCCAGCTATATCTGATGATAGAATTACAGTTAGGGATGAAGATTTGATGACTGATTATATCTGCTTCGCAATGGTTCACTTACAGTCGAGCTGCTCTGATTGTCATGCTGAAAGGGAATACATAATATCAGAACTACAAAATAAAGCTTATATTCTAACTAATAATGGCTTTAAACGACCTGCTGAGGCATCAATTCATTTCAGTAAAGAATTTGGAAATCCAGTGGACATAAGTAGGTTGATTGATAGGGTAAATCTGACATGGGATGAGGTTGATATCTCCTATTTGAAGCATCCAGTTGCTAAATCACTTCCAAATGGACTGATGAAGTGGAGAGATTTTTTCCAGAAAATTGGCATTGTGGATTTTGTGAAGGTAGTTCAAGTTGAGAAGGGTTTCACTGAGTTGTCTGAGGCTCTATTTAATAATCTAACTTGGGACCAGCACACTATTTCCCATGGGTTGAATGCCACAGATTGGGAATCACCTGAGTTAGTCCATTTATTATCCCTATTGTCCAGAGATGGCAACAGAAAAGGTTGTGAGTATCTCTTAGAGGTTCTCGATAAATTATGGGATGATTGCTATAGTGACAGAGCTACAGGGTACTGCTCTTCTAAGTCTGTTGCAGATAGAAAGCCCTTCAAATCTTCATTTATGAGCACCATCTGCGATGTGCAATGGGTAGTATCAGGAATGGATGATAAACTTCACTATCCCAAGGATCTATATCACGACAGTGTTGCAGTGCGGTCAATTCTTGGTGGATCTGCCCCATTTTTTGTTCCTAAGGCTACCAGTGAAAAATTTGTATCTGATATTGGTTTTAAGACAAGAGTCTCTCTTCACGATGCTCTGGAGATGTTGAAACTATGGAGATGTGAGAATCCGTTTAGGGCCAGCCTAGCACAAATGTCCAAATTTTACTCATTAATCTGGAATGAAATGGCTTCTTCAAAGAAGACAACTGCAGAGGAATTCTGTTTGGAACCTTTTGTATTTGTTCCATATGAATCTAGCTTCCGGCATGAGGATGTGGTGTCTGGTACATTTCTGTCCCTTGAAGAAGTATACTGGGATGATTCTACTTTCTTTGTGGACCAAATCAAGGAGATCCATCATCAGTGCAACTCAACAGTTGGTAATCATGGCCCCATAAACAGGATTCTGAGTAATTTCTACCCGGCCCTTCATGACTTCTTTGTTGATATATGTGGAGTACATGAGATCCCTCCTCTTCGTAGCTACCTTCAGATTTTGCTACAGTTTTCAAATGCTGTTTTGCCTTCACAAGCAGCTAATGCTGTTTTTCAAGTTTTTCAGAAGTGGGCTGATGGGCTCCAATCAGGAATGAGTGCTGAGGATATTGTATACTTGAAAGATTCTCTTACAAGGATGGAATGTACTGTGCTTCCTACTGTACAGGATAAGTGGGTATCTCTACATCCTTCCTATGGTCTCCTGTGCTGGTGTGATGATAAGACGTTGAAGAAGCAGTTTATGCATATGGATGGACTTGATTTTCTTTACTCCGGTGGACTAAGTAATGATGATGAAGAGATCCTAAGTACAAAAATGTCCGTCCTCATGCGAACCTTAGGGATTCCTGCACTTTCAGAGGTTGTGACTCGTGAGGCGATGTTTAATGGTCCGACAGATTCTAGCTTTAAAGCTGCATTGCTGGATTGGGCTTTGCCATATGCGCAGCGCTACTTACATAGTTTACATCCTGATAAATATTCTCAACTCAAGCAGTCTGGATTCGATATACTAAATCGTTTGCGAGTAGTAGAAGTTCAAAAGCTGTCCTACCGCAATGTTATAAAGATTGCTGGAAGTGAATCCAAGAAGCAAATCGAATGTAGTTGTGTTCTGCAGGATCACGATCTGTATACAACCCAGGAATCAGATTCTCACGCATTATTTATGGAGCTTTCTCGTTTGTTTTTTGATGGAAAGCCAGAATTACACTTGGCAAATTTCCTTCATATGATCACAACAATGGCTGAATCAGGTTCAACTGAGGAGCAGATAGACTTTTTTATCTTCAATAGCCAAAAGGTGCCAAAGCTTCCTGATGGAGAATCTGTTTGGTCCCTGTCACATGTGCATAATGATAGGTTACCCCAGCCAAGTGACTGGCGCTTTGTTGGTTGGAAAGCCCCACTAAGCTTTGGTTATGCAAATCTTTTCAAGGCTCAGGCACAATTTGCACAGCTTACCAGTGTCTCACAAATTGAAATGGATAATGATTCTGAAACCCATGTCAGACAAACAGTTGAATCAACTCCCATTTCAGTCGACATTAAATGGACAATTGGTGAGGGTACAGCAACAACATCTGCACCTTTAGTGCTGCCAAACTCCAATGATTTGCAAGAACACTTTGATGATGAGACTGATATGGATACTGATTTCAATCCTAATAATCTAGATTTTGTTGTTGACCCTCGCGTTTTGGGTTCATCTGATTGTAGCAAGGTAGACCATCCTAGATATGGCTCTAGTGGAAGAGATGCAATGCGTGGAAGAGATGCAATGCTTACCGGGAGGTTAGGTGAGGTTGTTGCTTTTAAATACTTAATTGCAAAAGCTGGCAAGTCAGTTGTGAGGTGGGTTAATGAAAGAATTGAAACTGGGCTACCCTATGACATAGTTGTAGGTGAGAAGGAAGATAGTCTAGAGTTCATTGAGGTTAAAGCCACCCAACAACAAAAAAAGGATTGGTTCCACATATCAATGAGGGAGTGGCAATTTGCAGCGGAAAAAGGCGAAGCCTTCAGCATTTTGCACGTCCTCTTATTGGGTAATAATGCTGCAAGAGTCTCAGTTTACAAGAATCCTGTAAAATTGTGTCATCTGGGCAAGCTACAGTTGCATCTTTCGATGCCTAGGCAGGAGAAGGAATTATTTCTTGTGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2842

Amino Acids

319.51

Weight (kDa)

6.04

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 1300 - 1400 2.5e-08 Sacsin domain
NOV_C PF13020 2721 - 2807 1.8e-19 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 7427
AasI GACNNNNNNGTC 2 cut(s) 479, 4487
Acc16I TGCGCA 1 cut(s) 7308
Acc36I ACCTGC 2 cut(s) 3307, 5791
Acc65I GGTACC 1 cut(s) 843
AccB1I GGYRCC 5 cut(s) 373, 843, 1066, 2791, 7666
AccB7I CCANNNNNTGG 2 cut(s) 4886, 6081
AccI GTMKAC 6 cut(s) 5050, 6675, 6975, 7496, 7905, 8088
AccII CGCG 3 cut(s) 471, 1113, 8058
AccIII TCCGGA 3 cut(s) 2099, 2224, 5473
AcoI YGGCCR 1 cut(s) 3
AcvI CACGTG 1 cut(s) 1781
AcyI GRCGYC 2 cut(s) 374, 5519
AdeI CACNNNGTG 1 cut(s) 4049
AfeI AGCGCT 1 cut(s) 7313
AflIII ACRYGT 5 cut(s) 1819, 2008, 3049, 4866, 7708
AhlI ACTAGT 2 cut(s) 757, 2654
AjiI CACGTC 2 cut(s) 1925, 8398
AjnI CCWGG 7 cut(s) 506, 3285, 3756, 4754, 4783, 4843, 7503
AjuI GAANNNNNNNTTGG 2 cut(s) 2696, 2728
AleI CACNNNNGTG 2 cut(s) 1927, 6342
Alw21I GWGCWC 6 cut(s) 438, 2271, 3862, 4045, 5481, 6269
AlwNI CAGNNNCTG 1 cut(s) 2954
Ama87I CYCGRG 2 cut(s) 424, 437
Aor13HI TCCGGA 3 cut(s) 2099, 2224, 5473
Aor51HI AGCGCT 1 cut(s) 7313
ApaI GGGCCC 2 cut(s) 425, 5145
ArsI GACNNNNNNTTYG 8 cut(s) 1675, 1707, 1759, 1791, 2822, 2854, 7733, 7765
AseI ATTAAT 4 cut(s) 1200, 3735, 4925, 6536
Asp700I GAANNNNTTC 6 cut(s) 2528, 4986, 5313, 5436, 5999, 8514
Asp718I GGTACC 1 cut(s) 843
AspA2I CCTAGG 1 cut(s) 8495
AspLEI GCGC 6 cut(s) 376, 529, 1115, 7309, 7314, 7749
AsuC2I CCSGG 4 cut(s) 490, 2534, 6788, 8152
AsuHPI GGTGA 9 cut(s) 59, 587, 2728, 4397, 4718, 6081, 7937, 8174, 8279
AsuII TTCGAA 2 cut(s) 655, 943
AvaI CYCGRG 2 cut(s) 424, 437
AvaII GGWCC 8 cut(s) 737, 2482, 2830, 5002, 6043, 6703, 7253, 7698
AvrII CCTAGG 1 cut(s) 8495
AxyI CCTNAGG 3 cut(s) 417, 6393, 7201
BaeGI GKGCMC 4 cut(s) 55, 425, 2794, 5145
BaeI ACNNNNGTAYC 4 cut(s) 1155, 1188, 4206, 4239
BamHI GGATCC 2 cut(s) 2987, 4076
BanI GGYRCC 5 cut(s) 373, 843, 1066, 2791, 7666
BanII GRGCYC 6 cut(s) 425, 2271, 3862, 5145, 5481, 6945
BauI CACGAG 2 cut(s) 5579, 7233
BbrPI CACGTG 1 cut(s) 1781
BbsI GAAGAC 4 cut(s) 1320, 2348, 2580, 6572
Bbv12I GWGCWC 6 cut(s) 438, 2271, 3862, 4045, 5481, 6269
BbvCI CCTCAGC 3 cut(s) 1608, 5787, 6963
BceAI ACGGC 3 cut(s) 571, 1700, 5381
BcgI CGANNNNNNTGC 6 cut(s) 415, 449, 1662, 1696, 6329, 6363
BciT130I CCWGG 7 cut(s) 508, 3287, 3758, 4756, 4785, 4845, 7505
BciVI GTATCC 2 cut(s) 4430, 8005
BclI TGATCA 2 cut(s) 2191, 7596
BcnI CCSGG 4 cut(s) 490, 2534, 6788, 8152
BcuI ACTAGT 2 cut(s) 757, 2654
BfoI RGCGCY 3 cut(s) 377, 7315, 7750
BfuAI ACCTGC 2 cut(s) 3307, 5791
BfuI GTATCC 2 cut(s) 4430, 8005
BglII AGATCT 1 cut(s) 4375
BlnI CCTAGG 1 cut(s) 8495
Bme18I GGWCC 8 cut(s) 737, 2482, 2830, 5002, 6043, 6703, 7253, 7698
BmeT110I CYCGRG 2 cut(s) 424, 437
BmgBI CACGTC 2 cut(s) 1925, 8398
BmrI ACTGGG 3 cut(s) 58, 6688, 8250
BmuI ACTGGG 3 cut(s) 58, 6688, 8250
BoxI GACNNNNGTC 1 cut(s) 6440
BpiI GAAGAC 4 cut(s) 1320, 2348, 2580, 6572
BplI GAGNNNNNCTC 2 cut(s) 420, 452
BpmI CTGGAG 3 cut(s) 16, 4128, 6482
Bpu10I CCTNAGC 5 cut(s) 1608, 3850, 5787, 6963, 7803
Bpu14I TTCGAA 2 cut(s) 655, 943
BpuEI CTTGAG 7 cut(s) 2442, 3876, 3932, 4259, 4397, 5573, 7337
BpuMI CCSGG 4 cut(s) 490, 2534, 6788, 8152
Bsa29I ATCGAT 1 cut(s) 4440
BsaAI YACGTR 1 cut(s) 1781
BsaBI GATNNNNATC 6 cut(s) 1809, 3534, 4380, 6333, 7488, 8022
BsaHI GRCGYC 2 cut(s) 374, 5519
BsaI GGTCTC 2 cut(s) 3524, 7067
BsaWI WCCGGW 6 cut(s) 2099, 2224, 2365, 4422, 5473, 7136
Bse118I RCCGGY 1 cut(s) 5
Bse21I CCTNAGG 3 cut(s) 417, 6393, 7201
Bse8I GATNNNNATC 6 cut(s) 1809, 3534, 4380, 6333, 7488, 8022
BseAI TCCGGA 3 cut(s) 2099, 2224, 5473
BseBI CCWGG 7 cut(s) 508, 3287, 3758, 4756, 4785, 4845, 7505
BseCI ATCGAT 1 cut(s) 4440
BseJI GATNNNNATC 6 cut(s) 1809, 3534, 4380, 6333, 7488, 8022
BseRI GAGGAG 9 cut(s) 54, 256, 833, 1069, 1334, 2129, 4748, 6828, 7643
BseSI GKGCMC 4 cut(s) 55, 425, 2794, 5145
BseYI CCCAGC 2 cut(s) 3689, 7731
BsgI GTGCAG 6 cut(s) 1023, 3693, 3848, 5379, 7197, 7932
Bsh1236I CGCG 3 cut(s) 471, 1113, 8058
Bsh1285I CGRYCG 1 cut(s) 451
BshNI GGYRCC 5 cut(s) 373, 843, 1066, 2791, 7666
BshVI ATCGAT 1 cut(s) 4440
BsiEI CGRYCG 1 cut(s) 451
BsiHKAI GWGCWC 6 cut(s) 438, 2271, 3862, 4045, 5481, 6269
BsiHKCI CYCGRG 2 cut(s) 424, 437
BsmBI CGTCTC 5 cut(s) 505, 594, 1723, 3413, 4473
BsmI GAATGC 5 cut(s) 2698, 2745, 3392, 3971, 6076
Bso31I GGTCTC 2 cut(s) 3524, 7067
BsoBI CYCGRG 2 cut(s) 424, 437
Bsp119I TTCGAA 2 cut(s) 655, 943
Bsp120I GGGCCC 2 cut(s) 421, 5141
Bsp13I TCCGGA 3 cut(s) 2099, 2224, 5473
Bsp1407I TGTACA 2 cut(s) 3079, 7024
Bsp19I CCATGG 3 cut(s) 1234, 5508, 6061
Bsp68I TCGCGA 1 cut(s) 471
BspDI ATCGAT 1 cut(s) 4440
BspEI TCCGGA 3 cut(s) 2099, 2224, 5473
BspFNI CGCG 3 cut(s) 471, 1113, 8058
BspHI TCATGA 3 cut(s) 3418, 4458, 6796
BspMAI CTGCAG 3 cut(s) 3304, 6577, 7482
BspMI ACCTGC 2 cut(s) 3307, 5791
BspQI GCTCTTC 4 cut(s) 717, 1482, 2985, 6223
BspT104I TTCGAA 2 cut(s) 655, 943
BspT107I GGYRCC 5 cut(s) 373, 843, 1066, 2791, 7666
BspTNI GGTCTC 2 cut(s) 3524, 7067
BsrFI RCCGGY 1 cut(s) 5
BsrGI TGTACA 2 cut(s) 3079, 7024
BssAI RCCGGY 1 cut(s) 5
BssNAI GTATAC 3 cut(s) 6676, 6976, 7497
BssNI GRCGYC 2 cut(s) 374, 5519
BssSI CACGAG 2 cut(s) 5579, 7233
Bst1107I GTATAC 3 cut(s) 6676, 6976, 7497
Bst2BI CACGAG 2 cut(s) 5579, 7233
Bst2UI CCWGG 7 cut(s) 508, 3287, 3758, 4756, 4785, 4845, 7505
BstACI GRCGYC 2 cut(s) 374, 5519
BstAPI GCANNNNNTGC 5 cut(s) 5492, 6273, 6905, 7105, 7814
BstAUI TGTACA 2 cut(s) 3079, 7024
BstBAI YACGTR 1 cut(s) 1781
BstBI TTCGAA 2 cut(s) 655, 943
BstDSI CCRYGG 4 cut(s) 1234, 2867, 5508, 6061
BstEII GGTNACC 3 cut(s) 8, 2911, 7725
BstENI CCTNNNNNAGG 1 cut(s) 918
BstFNI CGCG 3 cut(s) 471, 1113, 8058
BstH2I RGCGCY 3 cut(s) 377, 7315, 7750
BstHHI GCGC 6 cut(s) 376, 529, 1115, 7309, 7314, 7749
BstMCI CGRYCG 1 cut(s) 451
BstNI CCWGG 7 cut(s) 508, 3287, 3758, 4756, 4785, 4845, 7505
BstPAI GACNNNNGTC 1 cut(s) 6440
BstPI GGTNACC 3 cut(s) 8, 2911, 7725
BstSLI GKGCMC 4 cut(s) 55, 425, 2794, 5145
BstUI CGCG 3 cut(s) 471, 1113, 8058
BstV2I GAAGAC 4 cut(s) 1320, 2348, 2580, 6572
BstXI CCANNNNNNTGG 5 cut(s) 1241, 1929, 5555, 5957, 7743
BstZ17I GTATAC 3 cut(s) 6676, 6976, 7497
Bsu15I ATCGAT 1 cut(s) 4440
Bsu36I CCTNAGG 3 cut(s) 417, 6393, 7201
BsuI GTATCC 2 cut(s) 4430, 8005
BsuTUI ATCGAT 1 cut(s) 4440
BtgI CCRYGG 4 cut(s) 1234, 2867, 5508, 6061
BtgZI GCGATG 2 cut(s) 6291, 7256
BtrI CACGTC 2 cut(s) 1925, 8398
BtsI GCAGTG 4 cut(s) 2404, 2607, 3012, 6357
BtuMI TCGCGA 1 cut(s) 471
BveI ACCTGC 2 cut(s) 3307, 5791
CaiI CAGNNNCTG 1 cut(s) 2954
CciI TCATGA 3 cut(s) 3418, 4458, 6796
CfoI GCGC 6 cut(s) 376, 529, 1115, 7309, 7314, 7749
Cfr10I RCCGGY 1 cut(s) 5
ClaI ATCGAT 1 cut(s) 4440
CseI GACGC 2 cut(s) 3395, 5527
CspCI CAANNNNNGTGG 4 cut(s) 744, 779, 1767, 1802
DinI GGCGCC 1 cut(s) 375
DraI TTTAAA 6 cut(s) 126, 2466, 2581, 5776, 7273, 8179
DraIII CACNNNGTG 1 cut(s) 4049
DrdI GACNNNNNNGTC 2 cut(s) 479, 4487
DseDI GACNNNNNNGTC 2 cut(s) 479, 4487
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 2 cut(s) 14, 139
Ecl136II GAGCTC 3 cut(s) 2269, 3860, 5479
Eco24I GRGCYC 6 cut(s) 425, 2271, 3862, 5145, 5481, 6945
Eco31I GGTCTC 2 cut(s) 3524, 7067
Eco32I GATATC 2 cut(s) 810, 5881
Eco47I GGWCC 8 cut(s) 737, 2482, 2830, 5002, 6043, 6703, 7253, 7698
Eco47III AGCGCT 1 cut(s) 7313
Eco53kI GAGCTC 3 cut(s) 2269, 3860, 5479
Eco72I CACGTG 1 cut(s) 1781
Eco81I CCTNAGG 3 cut(s) 417, 6393, 7201
Eco88I CYCGRG 2 cut(s) 424, 437
Eco91I GGTNACC 3 cut(s) 8, 2911, 7725
EcoICRI GAGCTC 3 cut(s) 2269, 3860, 5479
EcoNI CCTNNNNNAGG 1 cut(s) 918
EcoO109I RGGNCCY 4 cut(s) 421, 737, 2830, 5002
EcoO65I GGTNACC 3 cut(s) 8, 2911, 7725
EcoRI GAATTC 4 cut(s) 397, 939, 3785, 6581
EcoRII CCWGG 7 cut(s) 506, 3285, 3756, 4754, 4783, 4843, 7503
EcoRV GATATC 2 cut(s) 810, 5881
EcoT22I ATGCAT 4 cut(s) 631, 3392, 5488, 7110
EcoT38I GRGCYC 6 cut(s) 425, 2271, 3862, 5145, 5481, 6945
EgeI GGCGCC 1 cut(s) 375
EheI GGCGCC 1 cut(s) 375
Esp3I CGTCTC 5 cut(s) 505, 594, 1723, 3413, 4473
FalI AAGNNNNNCTT 8 cut(s) 1152, 1184, 1461, 1493, 2964, 2996, 6975, 7007
FauI CCCGC 2 cut(s) 253, 390
FauNDI CATATG 6 cut(s) 2056, 5353, 6613, 7110, 7303, 7593
FbaI TGATCA 2 cut(s) 2191, 7596
FblI GTMKAC 6 cut(s) 5050, 6675, 6975, 7496, 7905, 8088
FriOI GRGCYC 6 cut(s) 425, 2271, 3862, 5145, 5481, 6945
FspI TGCGCA 1 cut(s) 7308
GlaI GCGC 6 cut(s) 375, 528, 1114, 7308, 7313, 7748
GsaI CCCAGC 2 cut(s) 3693, 7735
GsuI CTGGAG 3 cut(s) 16, 4128, 6482
HaeII RGCGCY 3 cut(s) 377, 7315, 7750
HgaI GACGC 2 cut(s) 3395, 5527
HhaI GCGC 6 cut(s) 376, 529, 1115, 7309, 7314, 7749
Hin1I GRCGYC 2 cut(s) 374, 5519
Hin6I GCGC 6 cut(s) 374, 527, 1113, 7307, 7312, 7747
HinP1I GCGC 6 cut(s) 374, 527, 1113, 7307, 7312, 7747
HincII GTYRAC 5 cut(s) 2277, 2725, 2887, 7906, 8050
HindII GTYRAC 5 cut(s) 2277, 2725, 2887, 7906, 8050
HindIII AAGCTT 7 cut(s) 464, 932, 2252, 2460, 5748, 7673, 7774
HpaI GTTAAC 1 cut(s) 2725
HphI GGTGA 9 cut(s) 59, 587, 2728, 4397, 4718, 6081, 7937, 8174, 8279
Hpy99I CGWCG 2 cut(s) 476, 1929
HpyCH4IV ACGT 7 cut(s) 498, 1000, 1760, 1780, 1924, 7088, 8397
HpySE526I ACGT 7 cut(s) 498, 1000, 1760, 1780, 1924, 7088, 8397
Hsp92I GRCGYC 2 cut(s) 374, 5519
HspAI GCGC 6 cut(s) 374, 527, 1113, 7307, 7312, 7747
KasI GGCGCC 1 cut(s) 373
Kpn2I TCCGGA 3 cut(s) 2099, 2224, 5473
KpnI GGTACC 1 cut(s) 847
Ksp22I TGATCA 2 cut(s) 2191, 7596
KspAI GTTAAC 1 cut(s) 2725
LguI GCTCTTC 4 cut(s) 717, 1482, 2985, 6223
LmnI GCTCC 9 cut(s) 1594, 1963, 2848, 4147, 5476, 5550, 6948, 7534, 7630
MaeII ACGT 7 cut(s) 498, 1000, 1760, 1780, 1924, 7088, 8397
MfeI CAATTG 6 cut(s) 1539, 2078, 2260, 2772, 4590, 7920
Mly113I GGCGCC 1 cut(s) 374
MlyI GAGTC 9 cut(s) 1250, 1957, 2077, 3263, 3545, 3776, 6450, 7225, 8436
Mph1103I ATGCAT 4 cut(s) 631, 3392, 5488, 7110
MroI TCCGGA 3 cut(s) 2099, 2224, 5473
MroXI GAANNNNTTC 6 cut(s) 2528, 4986, 5313, 5436, 5999, 8514
MspA1I CMGCKG 2 cut(s) 4255, 8366
MteI GCGCNGCGC 1 cut(s) 7310
MunI CAATTG 6 cut(s) 1539, 2078, 2260, 2772, 4590, 7920
Mva1269I GAATGC 5 cut(s) 2698, 2745, 3392, 3971, 6076
MvaI CCWGG 7 cut(s) 508, 3287, 3758, 4756, 4785, 4845, 7505
MvnI CGCG 3 cut(s) 471, 1113, 8058
NarI GGCGCC 1 cut(s) 374
NciI CCSGG 4 cut(s) 490, 2534, 6788, 8152
NcoI CCATGG 3 cut(s) 1234, 5508, 6061
NdeI CATATG 6 cut(s) 2056, 5353, 6613, 7110, 7303, 7593
NmeAIII GCCGAG 2 cut(s) 482, 577
NruI TCGCGA 1 cut(s) 471
NsbI TGCGCA 1 cut(s) 7308
NsiI ATGCAT 4 cut(s) 631, 3392, 5488, 7110
NspV TTCGAA 2 cut(s) 655, 943
OliI CACNNNNGTG 2 cut(s) 1927, 6342
PaeI GCATGC 4 cut(s) 968, 2428, 3365, 3845
PaeR7I CTCGAG 1 cut(s) 437
PagI TCATGA 3 cut(s) 3418, 4458, 6796
PciI ACATGT 5 cut(s) 1819, 2008, 3049, 4866, 7708
PciSI GCTCTTC 4 cut(s) 717, 1482, 2985, 6223
PcsI WCGNNNNNNNCGW 2 cut(s) 375, 444
PctI GAATGC 5 cut(s) 2698, 2745, 3392, 3971, 6076
PdmI GAANNNNTTC 6 cut(s) 2528, 4986, 5313, 5436, 5999, 8514
PflFI GACNNNGTC 1 cut(s) 5531
PflMI CCANNNNNTGG 2 cut(s) 4886, 6081
PleI GAGTC 9 cut(s) 1250, 1956, 2076, 3262, 3545, 3775, 6449, 7225, 8435
PluTI GGCGCC 1 cut(s) 377
PmaCI CACGTG 1 cut(s) 1781
PmlI CACGTG 1 cut(s) 1781
PpsI GAGTC 9 cut(s) 1250, 1956, 2076, 3262, 3545, 3775, 6449, 7225, 8435
Ppu21I YACGTR 1 cut(s) 1781
PpuMI RGGWCCY 3 cut(s) 737, 2830, 5002
PscI ACATGT 5 cut(s) 1819, 2008, 3049, 4866, 7708
PshAI GACNNNNGTC 1 cut(s) 6440
PshBI ATTAAT 4 cut(s) 1200, 3735, 4925, 6536
PsiI TTATAA 1 cut(s) 7427
Psp124BI GAGCTC 3 cut(s) 2271, 3862, 5481
Psp5II RGGWCCY 3 cut(s) 737, 2830, 5002
Psp6I CCWGG 7 cut(s) 506, 3285, 3756, 4754, 4783, 4843, 7503
PspCI CACGTG 1 cut(s) 1781
PspEI GGTNACC 3 cut(s) 8, 2911, 7725
PspFI CCCAGC 2 cut(s) 3689, 7731
PspGI CCWGG 7 cut(s) 506, 3285, 3756, 4754, 4783, 4843, 7503
PspOMI GGGCCC 2 cut(s) 421, 5141
PspPPI RGGWCCY 3 cut(s) 737, 2830, 5002
PsrI GAACNNNNNNTAC 2 cut(s) 7383, 7415
PstI CTGCAG 3 cut(s) 3304, 6577, 7482
PstNI CAGNNNCTG 1 cut(s) 2954
PsyI GACNNNGTC 1 cut(s) 5531
PvuII CAGCTG 1 cut(s) 4255
RruI TCGCGA 1 cut(s) 471
SacI GAGCTC 3 cut(s) 2271, 3862, 5481
SalI GTCGAC 1 cut(s) 7904
SapI GCTCTTC 4 cut(s) 717, 1482, 2985, 6223
SchI GAGTC 9 cut(s) 1250, 1957, 2077, 3263, 3545, 3776, 6450, 7225, 8436
SfoI GGCGCC 1 cut(s) 375
Sfr274I CTCGAG 1 cut(s) 437
SfuI TTCGAA 2 cut(s) 655, 943
SinI GGWCC 8 cut(s) 737, 2482, 2830, 5002, 6043, 6703, 7253, 7698
SlaI CTCGAG 1 cut(s) 437
SmlI CTYRAG 8 cut(s) 437, 2457, 3891, 3911, 4238, 4412, 5588, 7352
SmoI CTYRAG 8 cut(s) 437, 2457, 3891, 3911, 4238, 4412, 5588, 7352
SpeI ACTAGT 2 cut(s) 757, 2654
SphI GCATGC 4 cut(s) 968, 2428, 3365, 3845
SspDI GGCGCC 1 cut(s) 373
SspI AATATT 5 cut(s) 770, 948, 2491, 3733, 7343
SstI GAGCTC 3 cut(s) 2271, 3862, 5481
TaiI ACGT 7 cut(s) 501, 1003, 1763, 1783, 1927, 7091, 8400
TatI WGTACW 6 cut(s) 2626, 3079, 6823, 7007, 7024, 7172
TauI GCSGC 6 cut(s) 181, 184, 187, 190, 488, 3368
TspGWI ACGGA 6 cut(s) 1989, 2211, 4698, 4957, 6483, 7174
Tth111I GACNNNGTC 1 cut(s) 5531
Van91I CCANNNNNTGG 2 cut(s) 4886, 6081
VpaK11BI GGWCC 8 cut(s) 737, 2482, 2830, 5002, 6043, 6703, 7253, 7698
VspI ATTAAT 4 cut(s) 1200, 3735, 4925, 6536
XagI CCTNNNNNAGG 1 cut(s) 918
XbaI TCTAGA 4 cut(s) 2665, 3115, 8035, 8284
XcmI CCANNNNNNNNNTGG 3 cut(s) 1241, 4735, 8099
XhoI CTCGAG 1 cut(s) 437
XmaJI CCTAGG 1 cut(s) 8495
XmiI GTMKAC 6 cut(s) 5050, 6675, 6975, 7496, 7905, 8088
XmnI GAANNNNTTC 6 cut(s) 2528, 4986, 5313, 5436, 5999, 8514
Zsp2I ATGCAT 4 cut(s) 631, 3392, 5488, 7110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.