Rorug04G0352900

Domain of unknown function (DUF4228)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0009900
Physical Location & Seq
Reverse (-)
52486752 .. 52490378
3627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0352900.1

Sequence Viewer

Length: 1677 bp
ATGGCTTCCCGTAGGCTCTTATCATCTCTCGTCCGGTTGTCGGTACGCCGATCTCCGTCCAAATCTCCGATCTCCAACTCACACCCTAGGCTCACCTCCCCGTCGCCCCCGCCTCACCGCGCGTCGCCGTACGGCTACCTCCTCACGCGCGTGGCCGAGTACGCCACCGCCGCAGCCGCAGAGGTCAAGTCGGCGTCACCGGCCGGGCCAAAGGACGGCGCCAAGGGAAAAATCACAGACGAATTCACCGGGAAAGGCTCGATCGGGCAGGTGTGCCAGGTCATCGGAGCCGTCGTCGATGTGAGGTTCCAGGAGGGCTTGCCGCCGATCTTGACGGCGCTGGAAGTGCTGGACAACTCGATCCGATTGGTGCTTGAGGTGGCTCAGCACTTGGGTGAGAACATGGTCAGGACCATTGCTATGGATGGGACTGAAGGGCTTGTTAGAGGACAGCGCGTGCTCAACACCGGCTCTCCCATCACTGTGCCTGTTGGTAGGTCTACACTTGGTCGTATCATGAACGTTATTGGAGAGCCCATTGATCATAGAGGCGATATCAAAACCGATCACTTTCTGCCCATTCATAGAGAAGCTCCAGCCTTTGTTGAGCAAGCTACTGAACAAGAGATCCTTGTTACTGGAATTAAGGTTGTTGACCTTCTTGCTCCGTACCAAAGAGGAGGAAAGATTGGGTTGTTCGGTGGTGCTGGTGTAGGAAAGACTGTGCTTATTATGGAACTCATCAACAATGTCGCAAAGGCTCATGGTGGTTTCTCCGTGTTTGCTGGTGTTGGAGAACGCACTCGTGAGGGTAATGACTTGTACAGGGAAATGATTGAGAGTGGTGTCATTAAGCTCGGTGAAAAGCAGGCTGACAGCAAATGTGCTCTAGTGTACGGTCAAATGAATGAGCCCCCTGGTGCCCGTGCTCGTGTTGGGTTGACTGGCCTGACTGTGGCAGAACATTTCCGTGATGCTGAAGGGCAAGATGTGCTCCTCTTTATCGACAACATTTTCCGATTTACCCAAGCTAACTCTGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCTGTCGGATACCAACCTACTTTAGCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCCATTACTTCTGTCCAAGCTATTTATGTGCCTGCTGATGACTTGACAGATCCTGCTCCTGCAACTACTTTTGCTCACTTGGATGCCACAACTGTGTTGTCTAGACAGATCTCTGAGCTTGGTATCTATCCTGCTGTCGATCCCCTTGATTCCACTTCTCGTATGCTTTCTCCCCATATTTTGGGTGAGGAACATTACAACACTGCTCGTGGAGTGCAGAAGGTTCTTCAGAACTACAAGAATTTGCAAGATATCATTGCTATTTTGGGAATGGATGAGCTTAGTGAAGATGATAAATTGACTGTTGCCCGTGCTCGTAAAATTCAACGTTTCTTGAGCCAGCCGTTCCACGTTGCAGAAGTTTTCACCGGTGCCCCCGGAAAGTACGTAGAGTTGAAAGAAAGCATTACCAGCTTCCAGGGAGTGTTGGATGGTAAGTACGATGACCTTCCAGAACAATCGTTCTACATGGTTGGAGGTATTGAGGAGGTCATTGCTAAGGCTGAGAAGATTGCCAAGGAAAATGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4228

Protein Analysis

558

Amino Acids

60.1

Weight (kDa)

6.11

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Synthase_beta PF11421 1 - 50 2.5e-15 ATP synthase F1 beta subunit
ATP-synt_ab_N PF02874 91 - 157 2.4e-17 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 214 - 435 1.7e-68 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 443 - 516 5.1e-15 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 259
Acc36I ACCTGC 1 cut(s) 259
AccB1I GGYRCC 3 cut(s) 218, 920, 1517
AccB7I CCANNNNNTGG 1 cut(s) 1327
AccI GTMKAC 1 cut(s) 500
AccII CGCG 5 cut(s) 120, 122, 148, 150, 456
AciI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
AclI AACGTT 2 cut(s) 522, 1474
AclWI GGATC 4 cut(s) 355, 622, 1190, 1280
AcoI YGGCCR 2 cut(s) 153, 201
AcsI RAATTY 3 cut(s) 242, 1387, 1467
AcuI CTGAAG 3 cut(s) 453, 999, 1358
AcyI GRCGYC 2 cut(s) 194, 219
AfaI GTAC 8 cut(s) 45, 131, 161, 671, 824, 896, 1532, 1586
AfiI CCNNNNNNNGG 4 cut(s) 40, 215, 955, 1327
AgeI ACCGGT 1 cut(s) 1514
AgsI TTSAA 3 cut(s) 1118, 1472, 1543
AjnI CCWGG 4 cut(s) 276, 309, 916, 1563
AleI CACNNNNGTG 3 cut(s) 149, 393, 1238
AloI GAACNNNNNNTCC 2 cut(s) 612, 644
AluBI AGCT 9 cut(s) 593, 614, 856, 1031, 1097, 1166, 1264, 1426, 1560
AluI AGCT 9 cut(s) 593, 614, 856, 1031, 1097, 1166, 1264, 1426, 1560
Alw21I GWGCWC 5 cut(s) 462, 889, 931, 996, 1462
AlwI GGATC 4 cut(s) 355, 622, 1190, 1280
AlwNI CAGNNNCTG 1 cut(s) 1199
AoxI GGCC 4 cut(s) 153, 201, 206, 946
ApeKI GCWGC 1 cut(s) 173
ApoI RAATTY 3 cut(s) 242, 1387, 1467
AsiGI ACCGGT 1 cut(s) 1514
AspA2I CCTAGG 1 cut(s) 86
AspLEI GCGC 5 cut(s) 122, 150, 221, 340, 456
AspS9I GGNCC 2 cut(s) 206, 411
AsuC2I CCSGG 3 cut(s) 205, 250, 1524
AsuHPI GGTGA 8 cut(s) 85, 107, 189, 238, 407, 872, 1343, 1504
AvaII GGWCC 1 cut(s) 411
AvrII CCTAGG 1 cut(s) 86
BaeGI GKGCMC 2 cut(s) 925, 1522
BanI GGYRCC 3 cut(s) 218, 920, 1517
BanII GRGCYC 2 cut(s) 537, 915
BauI CACGAG 3 cut(s) 804, 930, 1353
BbsI GAAGAC 1 cut(s) 1106
Bbv12I GWGCWC 5 cut(s) 462, 889, 931, 996, 1462
BbvI GCAGC 1 cut(s) 185
BccI CCATC 4 cut(s) 419, 485, 1075, 1571
BceAI ACGGC 6 cut(s) 112, 148, 232, 275, 351, 1474
BciT130I CCWGG 4 cut(s) 278, 311, 918, 1565
BciVI GTATCC 2 cut(s) 1073, 1073
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 3 cut(s) 205, 250, 1524
BfaI CTAG 3 cut(s) 87, 890, 1248
BfoI RGCGCY 2 cut(s) 222, 341
BfuAI ACCTGC 1 cut(s) 259
BfuI GTATCC 2 cut(s) 1073, 1073
BglII AGATCT 1 cut(s) 1254
BisI GCNGC 4 cut(s) 171, 174, 177, 323
BlnI CCTAGG 1 cut(s) 86
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 4 cut(s) 172, 175, 178, 324
Bme1390I CCNGG 7 cut(s) 205, 250, 278, 311, 918, 1524, 1565
Bme18I GGWCC 1 cut(s) 411
BmgT120I GGNCC 2 cut(s) 206, 411
BmiI GGNNCC 6 cut(s) 220, 289, 308, 922, 1147, 1519
BmrFI CCNGG 7 cut(s) 205, 250, 278, 311, 918, 1524, 1565
BmsI GCATC 2 cut(s) 964, 1219
BpiI GAAGAC 1 cut(s) 1106
BpmI CTGGAG 1 cut(s) 579
Bpu10I CCTNAGC 1 cut(s) 1644
Bpu1102I GCTNAGC 1 cut(s) 384
BpuEI CTTGAG 2 cut(s) 395, 1501
BpuMI CCSGG 3 cut(s) 205, 250, 1524
BsaAI YACGTR 1 cut(s) 1534
BsaHI GRCGYC 2 cut(s) 194, 219
BsaJI CCNNGG 6 cut(s) 86, 222, 916, 1522, 1564, 1662
BsaWI WCCGGW 2 cut(s) 33, 1514
BsaXI ACNNNNNCTCC 4 cut(s) 279, 309, 457, 487
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 215, 955, 1327
Bse118I RCCGGY 3 cut(s) 199, 467, 1514
Bse1I ACTGG 2 cut(s) 643, 949
Bse3DI GCAATG 3 cut(s) 414, 1401, 1638
BseBI CCWGG 4 cut(s) 278, 311, 918, 1565
BseDI CCNNGG 6 cut(s) 86, 222, 916, 1522, 1564, 1662
BseGI GGATG 4 cut(s) 430, 1234, 1426, 1582
BseLI CCNNNNNNNGG 4 cut(s) 40, 215, 955, 1327
BseMI GCAATG 3 cut(s) 414, 1401, 1638
BseMII CTCAG 4 cut(s) 398, 1029, 1251, 1641
BseNI ACTGG 2 cut(s) 643, 949
BseRI GAGGAG 4 cut(s) 131, 693, 986, 1646
BseSI GKGCMC 2 cut(s) 925, 1522
BseX3I CGGCCG 1 cut(s) 201
BseXI GCAGC 1 cut(s) 185
BsgI GTGCAG 1 cut(s) 1382
Bsh1236I CGCG 5 cut(s) 120, 122, 148, 150, 456
Bsh1285I CGRYCG 2 cut(s) 204, 264
BshFI GGCC 4 cut(s) 155, 203, 208, 948
BshNI GGYRCC 3 cut(s) 218, 920, 1517
BshTI ACCGGT 1 cut(s) 1514
BsiEI CGRYCG 2 cut(s) 204, 264
BsiHKAI GWGCWC 5 cut(s) 462, 889, 931, 996, 1462
BsiSI CCGG 7 cut(s) 34, 200, 204, 249, 468, 1515, 1524
BsiWI CGTACG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 442
BslI CCNNNNNNNGG 4 cut(s) 40, 215, 955, 1327
BsmFI GGGAC 1 cut(s) 442
BsnI GGCC 4 cut(s) 155, 203, 208, 948
Bsp1286I GDGCHC 9 cut(s) 462, 537, 889, 915, 925, 931, 996, 1462, 1522
Bsp1407I TGTACA 1 cut(s) 822
Bsp1720I GCTNAGC 1 cut(s) 384
BspACI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
BspANI GGCC 4 cut(s) 155, 203, 208, 948
BspCNI CTCAG 4 cut(s) 397, 1030, 1252, 1642
BspFNI CGCG 5 cut(s) 120, 122, 148, 150, 456
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 6 cut(s) 220, 289, 308, 922, 1147, 1519
BspMI ACCTGC 1 cut(s) 259
BspPI GGATC 4 cut(s) 355, 622, 1190, 1280
BspT107I GGYRCC 3 cut(s) 218, 920, 1517
BsrDI GCAATG 3 cut(s) 414, 1401, 1638
BsrFI RCCGGY 3 cut(s) 199, 467, 1514
BsrGI TGTACA 1 cut(s) 822
BsrI ACTGG 2 cut(s) 643, 949
BssAI RCCGGY 3 cut(s) 199, 467, 1514
BssECI CCNNGG 6 cut(s) 86, 222, 916, 1522, 1564, 1662
BssNI GRCGYC 2 cut(s) 194, 219
BssSI CACGAG 3 cut(s) 804, 930, 1353
BssT1I CCWWGG 3 cut(s) 86, 222, 1662
Bst2BI CACGAG 3 cut(s) 804, 930, 1353
Bst2UI CCWGG 4 cut(s) 278, 311, 918, 1565
Bst4CI ACNGT 6 cut(s) 484, 724, 899, 955, 1240, 1450
BstACI GRCGYC 2 cut(s) 194, 219
BstAPI GCANNNNNTGC 1 cut(s) 991
BstAUI TGTACA 1 cut(s) 822
BstBAI YACGTR 1 cut(s) 1534
BstC8I GCNNGC 6 cut(s) 320, 458, 612, 870, 1179, 1487
BstDEI CTNAG 6 cut(s) 384, 1038, 1260, 1427, 1644, 1650
BstF5I GGATG 4 cut(s) 430, 1234, 1426, 1582
BstFNI CGCG 5 cut(s) 120, 122, 148, 150, 456
BstH2I RGCGCY 2 cut(s) 222, 341
BstHHI GCGC 5 cut(s) 122, 150, 221, 340, 456
BstMCI CGRYCG 2 cut(s) 204, 264
BstMWI GCNNNNNNNGC 7 cut(s) 161, 170, 176, 200, 346, 991, 1557
BstNI CCWGG 4 cut(s) 278, 311, 918, 1565
BstSCI CCNGG 7 cut(s) 203, 248, 276, 309, 916, 1522, 1563
BstSLI GKGCMC 2 cut(s) 925, 1522
BstSNI TACGTA 1 cut(s) 1534
BstUI CGCG 5 cut(s) 120, 122, 148, 150, 456
BstV1I GCAGC 1 cut(s) 185
BstV2I GAAGAC 1 cut(s) 1106
BstX2I RGATCY 3 cut(s) 627, 1195, 1254
BstXI CCANNNNNNTGG 1 cut(s) 421
BstYI RGATCY 3 cut(s) 627, 1195, 1254
BstZI CGGCCG 1 cut(s) 201
BsuI GTATCC 2 cut(s) 1073, 1073
BsuRI GGCC 4 cut(s) 155, 203, 208, 948
BtsCI GGATG 4 cut(s) 430, 1234, 1426, 1582
BtsI GCAGTG 1 cut(s) 1347
BtsIMutI CAGTG 2 cut(s) 480, 1347
BveI ACCTGC 1 cut(s) 259
Cac8I GCNNGC 6 cut(s) 320, 458, 612, 870, 1179, 1487
CaiI CAGNNNCTG 1 cut(s) 1199
CciI TCATGA 1 cut(s) 516
CfoI GCGC 5 cut(s) 122, 150, 221, 340, 456
Cfr10I RCCGGY 3 cut(s) 199, 467, 1514
Cfr13I GGNCC 2 cut(s) 206, 411
CseI GACGC 2 cut(s) 111, 183
Csp6I GTAC 8 cut(s) 44, 130, 160, 670, 823, 895, 1531, 1585
CspAI ACCGGT 1 cut(s) 1514
CviAII CATG 4 cut(s) 403, 517, 764, 1615
CviQI GTAC 8 cut(s) 44, 130, 160, 670, 823, 895, 1531, 1585
DdeI CTNAG 6 cut(s) 384, 1038, 1260, 1427, 1644, 1650
DinI GGCGCC 1 cut(s) 220
EaeI YGGCCR 2 cut(s) 153, 201
EagI CGGCCG 1 cut(s) 201
EclXI CGGCCG 1 cut(s) 201
Eco105I TACGTA 1 cut(s) 1534
Eco130I CCWWGG 3 cut(s) 86, 222, 1662
Eco24I GRGCYC 2 cut(s) 537, 915
Eco32I GATATC 2 cut(s) 556, 1399
Eco47I GGWCC 1 cut(s) 411
Eco52I CGGCCG 1 cut(s) 201
Eco57I CTGAAG 3 cut(s) 453, 999, 1358
EcoRI GAATTC 1 cut(s) 242
EcoRII CCWGG 4 cut(s) 276, 309, 916, 1563
EcoRV GATATC 2 cut(s) 556, 1399
EcoT14I CCWWGG 3 cut(s) 86, 222, 1662
EcoT38I GRGCYC 2 cut(s) 537, 915
EgeI GGCGCC 1 cut(s) 220
EheI GGCGCC 1 cut(s) 220
ErhI CCWWGG 3 cut(s) 86, 222, 1662
FaeI CATG 4 cut(s) 406, 520, 767, 1618
FalI AAGNNNNNCTT 2 cut(s) 615, 647
FaqI GGGAC 1 cut(s) 442
FatI CATG 4 cut(s) 402, 516, 763, 1614
FauI CCCGC 1 cut(s) 117
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 500
Fnu4HI GCNGC 4 cut(s) 171, 174, 177, 323
FokI GGATG 4 cut(s) 437, 1241, 1433, 1589
FriOI GRGCYC 2 cut(s) 537, 915
Fsp4HI GCNGC 4 cut(s) 171, 174, 177, 323
FspBI CTAG 3 cut(s) 87, 890, 1248
GlaI GCGC 5 cut(s) 121, 149, 220, 339, 455
GluI GCNGC 4 cut(s) 171, 174, 177, 323
GsuI CTGGAG 1 cut(s) 579
HaeII RGCGCY 2 cut(s) 222, 341
HaeIII GGCC 4 cut(s) 155, 203, 208, 948
HapII CCGG 7 cut(s) 34, 200, 204, 249, 468, 1515, 1524
HgaI GACGC 2 cut(s) 111, 183
HhaI GCGC 5 cut(s) 122, 150, 221, 340, 456
Hin1I GRCGYC 2 cut(s) 194, 219
Hin1II CATG 4 cut(s) 406, 520, 767, 1618
Hin6I GCGC 5 cut(s) 120, 148, 219, 338, 454
HinP1I GCGC 5 cut(s) 120, 148, 219, 338, 454
HincII GTYRAC 2 cut(s) 655, 942
HindII GTYRAC 2 cut(s) 655, 942
HinfI GANTC 1 cut(s) 1295
HpaII CCGG 7 cut(s) 34, 200, 204, 249, 468, 1515, 1524
HphI GGTGA 8 cut(s) 85, 107, 189, 238, 407, 872, 1343, 1504
Hpy166II GTNNAC 4 cut(s) 501, 655, 895, 942
Hpy188I TCNGA 8 cut(s) 69, 287, 365, 1019, 1039, 1079, 1261, 1377
Hpy188III TCNNGA 8 cut(s) 331, 409, 517, 806, 1118, 1248, 1480, 1598
Hpy8I GTNNAC 4 cut(s) 501, 655, 895, 942
Hpy99I CGWCG 4 cut(s) 106, 127, 296, 299
HpyAV CCTTC 6 cut(s) 428, 668, 974, 1135, 1360, 1604
HpyCH4III ACNGT 6 cut(s) 484, 724, 899, 955, 1240, 1450
HpyCH4IV ACGT 4 cut(s) 522, 1474, 1497, 1533
HpyCH4V TGCA 4 cut(s) 1208, 1363, 1393, 1502
HpyF10VI GCNNNNNNNGC 7 cut(s) 161, 170, 176, 200, 346, 991, 1557
HpyF3I CTNAG 6 cut(s) 384, 1038, 1260, 1427, 1644, 1650
HpySE526I ACGT 4 cut(s) 522, 1474, 1497, 1533
Hsp92I GRCGYC 2 cut(s) 194, 219
Hsp92II CATG 4 cut(s) 406, 520, 767, 1618
HspAI GCGC 5 cut(s) 120, 148, 219, 338, 454
KasI GGCGCC 1 cut(s) 218
Ksp22I TGATCA 1 cut(s) 541
LmnI GCTCC 5 cut(s) 287, 598, 670, 999, 1207
Lsp1109I GCAGC 1 cut(s) 185
LweI GCATC 2 cut(s) 964, 1219
MaeI CTAG 3 cut(s) 87, 890, 1248
MaeII ACGT 4 cut(s) 522, 1474, 1497, 1533
MaeIII GTNAC 2 cut(s) 195, 634
MboII GAAGA 4 cut(s) 1106, 1364, 1445, 1666
MflI RGATCY 3 cut(s) 627, 1195, 1254
MhlI GDGCHC 9 cut(s) 462, 537, 889, 915, 925, 931, 996, 1462, 1522
MluCI AATT 5 cut(s) 242, 642, 1387, 1442, 1467
Mly113I GGCGCC 1 cut(s) 219
MmeI TCCRAC 5 cut(s) 99, 772, 1057, 1554, 1600
MseI TTAA 3 cut(s) 645, 852, 1675
MslI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
MspI CCGG 7 cut(s) 34, 200, 204, 249, 468, 1515, 1524
MspR9I CCNGG 7 cut(s) 205, 250, 278, 311, 918, 1524, 1565
MvaI CCWGG 4 cut(s) 278, 311, 918, 1565
MvnI CGCG 5 cut(s) 120, 122, 148, 150, 456
MwoI GCNNNNNNNGC 7 cut(s) 161, 170, 176, 200, 346, 991, 1557
NarI GGCGCC 1 cut(s) 219
NciI CCSGG 3 cut(s) 205, 250, 1524
NlaIII CATG 4 cut(s) 406, 520, 767, 1618
NlaIV GGNNCC 6 cut(s) 220, 289, 308, 922, 1147, 1519
NmeAIII GCCGAG 1 cut(s) 181
NmuCI GTSAC 1 cut(s) 195
OliI CACNNNNGTG 3 cut(s) 149, 393, 1238
PagI TCATGA 1 cut(s) 516
PaqCI CACCTGC 1 cut(s) 259
PcsI WCGNNNNNNNCGW 1 cut(s) 291
PfeI GAWTC 1 cut(s) 1295
Pfl23II CGTACG 1 cut(s) 129
PflMI CCANNNNNTGG 1 cut(s) 1327
PfoI TCCNGGA 1 cut(s) 309
PinAI ACCGGT 1 cut(s) 1514
PkrI GCNGC 4 cut(s) 172, 175, 178, 324
Ple19I CGATCG 1 cut(s) 264
PluTI GGCGCC 1 cut(s) 222
Ppu21I YACGTR 1 cut(s) 1534
Psp1406I AACGTT 2 cut(s) 522, 1474
Psp6I CCWGG 4 cut(s) 276, 309, 916, 1563
PspGI CCWGG 4 cut(s) 276, 309, 916, 1563
PspLI CGTACG 1 cut(s) 129
PspN4I GGNNCC 6 cut(s) 220, 289, 308, 922, 1147, 1519
PspPI GGNCC 2 cut(s) 206, 411
PstNI CAGNNNCTG 1 cut(s) 1199
PsuI RGATCY 3 cut(s) 627, 1195, 1254
PvuI CGATCG 1 cut(s) 264
RsaI GTAC 8 cut(s) 45, 131, 161, 671, 824, 896, 1532, 1586
RsaNI GTAC 8 cut(s) 44, 130, 160, 670, 823, 895, 1531, 1585
RseI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
SaqAI TTAA 3 cut(s) 645, 852, 1675
SatI GCNGC 4 cut(s) 171, 174, 177, 323
Sau96I GGNCC 2 cut(s) 206, 411
ScrFI CCNGG 7 cut(s) 205, 250, 278, 311, 918, 1524, 1565
SduI GDGCHC 9 cut(s) 462, 537, 889, 915, 925, 931, 996, 1462, 1522
SfaNI GCATC 2 cut(s) 964, 1219
SfoI GGCGCC 1 cut(s) 220
SgrAI CRCCGGYG 1 cut(s) 1514
SinI GGWCC 1 cut(s) 411
SmiMI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
SmlI CTYRAG 2 cut(s) 374, 1480
SmoI CTYRAG 2 cut(s) 374, 1480
SnaBI TACGTA 1 cut(s) 1534
Sse9I AATT 5 cut(s) 242, 642, 1387, 1442, 1467
SsiI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
SspDI GGCGCC 1 cut(s) 218
SspMI CTAG 3 cut(s) 87, 890, 1248
StyD4I CCNGG 7 cut(s) 203, 248, 276, 309, 916, 1522, 1563
StyI CCWWGG 3 cut(s) 86, 222, 1662
TaaI ACNGT 6 cut(s) 484, 724, 899, 955, 1240, 1450
TaiI ACGT 4 cut(s) 525, 1477, 1500, 1536
TaqI TCGA 5 cut(s) 260, 297, 359, 1005, 1284
TasI AATT 5 cut(s) 242, 642, 1387, 1442, 1467
TatI WGTACW 1 cut(s) 822
TauI GCSGC 3 cut(s) 173, 179, 325
TfiI GAWTC 1 cut(s) 1295
Tru1I TTAA 3 cut(s) 645, 852, 1675
Tru9I TTAA 3 cut(s) 645, 852, 1675
TscAI CASTG 2 cut(s) 487, 1354
TseFI GTSAC 1 cut(s) 195
TseI GCWGC 1 cut(s) 173
Tsp45I GTSAC 1 cut(s) 195
TspDTI ATGAA 3 cut(s) 533, 572, 920
TspGWI ACGGA 4 cut(s) 45, 657, 766, 959
TspRI CASTG 2 cut(s) 487, 1354
Van91I CCANNNNNTGG 1 cut(s) 1327
VpaK11BI GGWCC 1 cut(s) 411
XapI RAATTY 3 cut(s) 242, 1387, 1467
XbaI TCTAGA 1 cut(s) 1247
XmaJI CCTAGG 1 cut(s) 86
XmiI GTMKAC 1 cut(s) 500
XspI CTAG 3 cut(s) 87, 890, 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.