Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007622

Physical Location & Seq

Genomic Coordinates Reverse (-)

58021818 .. 58026190

Gene Structure 4373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0419700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGTTTGGTGACAAGGACCGCAGCAGTGCTCTGCTGGCCGCCGGAGACGAGGCTTCTCAGAGCAAGGTGACGCGCCACGTCTCCAAGCAAAGCAAGGACTACAACAACCCGGAAAAGAAAGCGGGGGGTCTTAATTTTCTGAGGGATTCAGGCTCTGATGGGTTTCAATCAAAGCCTTCCTCTAATTTTGGGTCTCAGGAGCTGACCCTGAGCTACCTCTGCGATAATTCCAAGCTGGGTTTTCTGGAGAAAGAGTTTTCCGGCAAGAATCTGTTGACTTCTTTGGAGAAAGGTAAGGAAATCTTGGTTCCCGAGAATTCAAGCCAAGATCACAACAAGTGGGTTGAGAGGGATTTCCTCAATTTAAACGAGACCAGGCTCAATTCCTCAAAACGTGAGCTTGGTGAAGATGTTGAGAGAGACAATAGGGAGAAGAAGCCAAAGCTTGAGACTTTGAATCTCTCTCTGGCCTTGCCTCAGGTCTCGCTCTCTCTCACCGCCTCAAACGCTTTGCAAAACGGCGAGCCTTCTATGCTGAGGCCCATGGCGCCTTCCACCAATACGTTAACCACTTATTCCAACGATTACACAGCTGCTGCTTCTTTATCTTACTCTTATTCGCATCCCTATTCACACAATCCAAGTTGCTCGCTGACAGAGAATTTCGAGTATTCTGTTGGGAAGGATGATCATATTTGGAACTGTGGGGAGGGCACTAATGGTTCTGTTCATAGCAGGTTCAAGCCGATTGGGGATGGAGTTGGTTTGGCAAATCCTGGTGGGATTCTCTCGATGATGCAGAGTAACAATCGAAAGGATTCAGGTACTAATAGTCTTTATAGGACAACTAGCTCTGATAATAACCAGTCTTTTTTTCCATCCGAGTTGCCTGCTAAGCCTAGAATTGATACTCATTCTGGAGATTCGAGAGGGAGAGGTTCGGACAGTTTGAGAGGTTTGGAGGGTGGTGGTGGGAGGGTTAGGAAGCTTTCTAGGCCGGAGAGAATTCTTCGTGAAATTGTTTCCGAGTCTATACCTGTCATGGCTCCGGTGGTTCAGGAGCTTCCTGAGGAAACACTTTTATCGACTAATGAGTACTTGAGGAACCTGATTTCAATGCCTGAGAAGAAAGAGGAGTTGGTGAGCCTTCAGAAAAGGCTTGAGAGGAGGTCTGATCTTACAAAGGAGAATCTGTCAAAGTGTCAGAAGGATCAATTGGAGATTCTGGTTGCGGTGAAAATGGGGCTTGCGAGCTTTGTATCTGGGAAAAACCGCCTTTCGGCAACTGAGTTGGTGGAGACTTTCTTGTTTATGAGATGTAGGAACGTGAATTGCAAGAGTTTGTTGCCTGTTGATGATTGTGACTGCAAGATTTGCTCAGGAAATAAGGGGTTTTGTAGTTCATGTATGTGTCCTGTTTGTTTGAATTTTGACTGTGCTAGTAACACTTGTAGTTGGGTTGGATGTGATGTTTGTTCGCATTGGTGCCATGCTGCGTGTGGTATTCAGAAGAATCTCATTAAGCCAGGTCCGAGCTTGAAGGGGCCTTCTGGGACAACTGAGATGCAATTCCATTGCATTGGATGCAGTCATGCTTCGGAAATGTTTGGGTTTGTTAAGGATGTGTTTCTGTGCTGTGCAAAGGACTGGGGACTAGAGACCCTTGTGAAGGAGCTTGACTGTGTTAAGCAGATTTTTAGGAGAAGTGAAGATTTTAAAGGCCGGGAACTGCATATCAAGGCTGAGGAGATTATCTCCAAGCTAGGAAGCCAAGTGATGTCTCCTTCAGATGCCTGCAATTTTATTATCCAGTTTTTCAACTATACAGATGGAGTGTCAGAATATCCAGCTTCTAGTATAACCACATCCTCAACAAAGGAGTTGGCAACTCCTCAAACCAGCCTTAGGAAAGAAGCAACCCTTTTTTCACAACCTGCTTCTCTACCTCCAAAATATGCTGCTTACAACACAAGTTCCAGTGTACAATCTGATTTATTGTCAAATGATCTCCGTCAGATTGACCGAAAATCTTCCCTCATAAGCACTGAGGATGAGTTCCGTTTTGGAACAGTACCGAAAATAGAAGGGTTTGACAGTTTGGAAAGCATGGTGAGGATAAAGCAAGCTGAAGCTAGAATGTACCAGAGCAAGGCAGACGAAGCACGGAGAGAGGCAGAAGGTTACCGGCAGATGATTCGGGAAAATTCAGAGAAGGTGGAGGAAGAGTATGCTGGAAAGTTTTCCGAATTGTGTCTGCAAGAGACGGAGGAAAAGCGAAGGAAGAAACTGGAGGAGCTCAAAGTTTTGGAAGGTTCACATTGTGATTATTACAACATGAAGACTAGGATGCAAGCCGAAATTGCTGGCTTGTTGGCAAAAATGGAAGCGACAAAGCAGCAACAACGGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Motile_Sperm

Protein Analysis

803

Amino Acids

89.46

Weight (kDa)

6.32

Isoelectric Point (pI)

50.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	440 - 563	2.4e-36	PHD - plant homeodomain finger protein
Oberon_cc	PF16312	670 - 791	1.3e-41	Coiled-coil region of Oberon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21450 AT4G21450
fragaria_vesca	FvH4_3g03880 FvH4_3g03880 FvH4_3g03880
malus_domestica	MD05G1326200.v1.1 MD10G1304100.v1.1
prunus_persica	Prupe.4G035500_v2.0.a1 Prupe.4G035500_v2.0.a1 Prupe.4G035500_v2.0.a1 Prupe.4G035500_v2.0.a1
pyrus_communis	pycom05g30060 pycom10g25670
rosa_chinensis	RchiOBHm_Chr5g0006131
rosa_laevigata	RLG00000031380
rosa_multiflora	Rmu_co8404829.1_g000001 Rmu_sc0004331.1_g000010
rosa_roxburghii	Rroxscaffold_1G00069870
rosa_rugosa	Rorug04G0419700
rosa_samantha	Rh5AG047500 Rh5BG046200 Rh5CG054900 Rh5DG046000
rosa_wichuraiana	Rw5G004740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	726, 1942
AccB1I	GGYRCC	2 cut(s)	547, 1485
AccII	CGCG	1 cut(s)	73
AciI	CCGC	6 cut(s)	19, 39, 122, 498, 1232, 1273
AclWI	GGATC	1 cut(s)	1218
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	5 cut(s)	316, 661, 1005, 1426, 2203
AcuI	CTGAAG	3 cut(s)	1133, 1770, 2148
AcyI	GRCGYC	1 cut(s)	548
AdeI	CACNNNGTG	1 cut(s)	2321
AfaI	GTAC	5 cut(s)	826, 1097, 1983, 2073, 2141
AfiI	CCNNNNNNNGG	4 cut(s)	1279, 1669, 1905, 2149
AgsI	TTSAA	8 cut(s)	167, 321, 457, 742, 1116, 1426, 1540, 1819
AjiI	CACGTC	1 cut(s)	79
AjnI	CCWGG	3 cut(s)	374, 775, 1525
AjuI	GAANNNNNNNTTGG	4 cut(s)	1121, 1153, 1199, 1231
Alw21I	GWGCWC	2 cut(s)	31, 2298
AlwI	GGATC	1 cut(s)	1218
AlwNI	CAGNNNCTG	3 cut(s)	155, 202, 596
Ama87I	CYCGRG	1 cut(s)	311
AoxI	GGCC	6 cut(s)	36, 468, 539, 995, 1544, 1720
ApeKI	GCWGC	6 cut(s)	21, 593, 596, 1493, 1958, 2395
ApoI	RAATTY	5 cut(s)	316, 661, 1005, 1426, 2203
Asp700I	GAANNNNTTC	3 cut(s)	817, 2029, 2239
AspLEI	GCGC	2 cut(s)	75, 550
AspS9I	GGNCC	4 cut(s)	16, 540, 1529, 1544
AsuC2I	CCSGG	2 cut(s)	110, 1724
AsuHPI	GGTGA	7 cut(s)	20, 79, 416, 487, 1153, 1246, 2122
AvaI	CYCGRG	1 cut(s)	311
AvaII	GGWCC	2 cut(s)	16, 1529
AxyI	CCTNAGG	3 cut(s)	477, 1068, 1904
BaeGI	GKGCMC	1 cut(s)	716
BanI	GGYRCC	2 cut(s)	547, 1485
BanII	GRGCYC	1 cut(s)	2298
BbsI	GAAGAC	1 cut(s)	2345
Bbv12I	GWGCWC	2 cut(s)	31, 2298
BbvCI	CCTCAGC	2 cut(s)	536, 1743
BbvI	GCAGC	6 cut(s)	33, 580, 583, 1480, 1945, 2407
BccI	CCATC	4 cut(s)	152, 749, 886, 1823
BceAI	ACGGC	1 cut(s)	535
BcgI	CGANNNNNNTGC	4 cut(s)	872, 906, 2177, 2211
BciT130I	CCWGG	3 cut(s)	376, 777, 1527
BclI	TGATCA	1 cut(s)	688
BcnI	CCSGG	2 cut(s)	110, 1724
BfaI	CTAG	9 cut(s)	849, 900, 993, 1440, 1655, 1763, 1854, 2133, 2343
BfoI	RGCGCY	1 cut(s)	551
BfuAI	ACCTGC	2 cut(s)	726, 1942
BisI	GCNGC	7 cut(s)	22, 39, 594, 597, 1494, 1959, 2396
BlpI	GCTNAGC	1 cut(s)	894
BlsI	GCNGC	7 cut(s)	23, 40, 595, 598, 1495, 1960, 2397
BmcAI	AGTACT	1 cut(s)	1097
Bme1390I	CCNGG	5 cut(s)	110, 376, 777, 1527, 1724
Bme18I	GGWCC	2 cut(s)	16, 1529
BmeT110I	CYCGRG	1 cut(s)	311
BmgBI	CACGTC	1 cut(s)	79
BmgT120I	GGNCC	4 cut(s)	16, 540, 1529, 1544
BmiI	GGNNCC	6 cut(s)	309, 549, 1047, 1106, 1487, 1545
BmrFI	CCNGG	5 cut(s)	110, 376, 777, 1527, 1724
BmrI	ACTGGG	1 cut(s)	1657
BmsI	GCATC	6 cut(s)	631, 786, 1554, 1574, 1780, 2337
BmuI	ACTGGG	1 cut(s)	1657
BpiI	GAAGAC	1 cut(s)	2345
BplI	GAGNNNNNCTC	2 cut(s)	1739, 1771
BpmI	CTGGAG	3 cut(s)	266, 939, 2309
Bpu10I	CCTNAGC	4 cut(s)	209, 536, 1378, 1743
Bpu1102I	GCTNAGC	1 cut(s)	894
BpuEI	CTTGAG	3 cut(s)	467, 1120, 1181
BpuMI	CCSGG	2 cut(s)	110, 1724
BsaHI	GRCGYC	1 cut(s)	548
BsaI	GGTCTC	4 cut(s)	198, 365, 487, 1652
BsaJI	CCNNGG	1 cut(s)	543
BsaWI	WCCGGW	1 cut(s)	1048
BsaXI	ACNNNNNCTCC	6 cut(s)	239, 269, 1178, 1208, 2210, 2240
Bsc4I	CCNNNNNNNGG	4 cut(s)	1279, 1669, 1905, 2149
Bse118I	RCCGGY	1 cut(s)	2184
Bse1I	ACTGG	5 cut(s)	865, 1652, 1810, 1977, 2292
Bse21I	CCTNAGG	3 cut(s)	477, 1068, 1904
Bse3DI	GCAATG	1 cut(s)	1573
BseBI	CCWGG	3 cut(s)	376, 777, 1527
BseDI	CCNNGG	1 cut(s)	543
BseLI	CCNNNNNNNGG	4 cut(s)	1279, 1669, 1905, 2149
BseMI	GCAATG	1 cut(s)	1573
BseNI	ACTGG	5 cut(s)	865, 1652, 1810, 1977, 2292
BseRI	GAGGAG	5 cut(s)	1148, 1180, 1760, 1881, 2306
BseSI	GKGCMC	1 cut(s)	716
BseXI	GCAGC	6 cut(s)	33, 580, 583, 1480, 1945, 2407
BseYI	CCCAGC	1 cut(s)	235
Bsh1236I	CGCG	1 cut(s)	73
BshFI	GGCC	6 cut(s)	38, 470, 541, 997, 1546, 1722
BshNI	GGYRCC	2 cut(s)	547, 1485
BsiHKAI	GWGCWC	2 cut(s)	31, 2298
BsiHKCI	CYCGRG	1 cut(s)	311
BsiSI	CCGG	7 cut(s)	42, 110, 261, 998, 1049, 1723, 2185
BslFI	GGGAC	2 cut(s)	1567, 1665
BslI	CCNNNNNNNGG	4 cut(s)	1279, 1669, 1905, 2149
BsmBI	CGTCTC	3 cut(s)	39, 85, 2255
BsmFI	GGGAC	2 cut(s)	1567, 1665
BsnI	GGCC	6 cut(s)	38, 470, 541, 997, 1546, 1722
Bso31I	GGTCTC	4 cut(s)	198, 365, 487, 1652
BsoBI	CYCGRG	1 cut(s)	311
Bsp1286I	GDGCHC	3 cut(s)	31, 716, 2298
Bsp1407I	TGTACA	1 cut(s)	1981
Bsp143I	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
Bsp1720I	GCTNAGC	1 cut(s)	894
Bsp19I	CCATGG	1 cut(s)	543
BspACI	CCGC	6 cut(s)	19, 39, 122, 498, 1232, 1273
BspANI	GGCC	6 cut(s)	38, 470, 541, 997, 1546, 1722
BspFNI	CGCG	1 cut(s)	73
BspLI	GGNNCC	6 cut(s)	309, 549, 1047, 1106, 1487, 1545
BspMI	ACCTGC	2 cut(s)	726, 1942
BspPI	GGATC	1 cut(s)	1218
BspT107I	GGYRCC	2 cut(s)	547, 1485
BspTNI	GGTCTC	4 cut(s)	198, 365, 487, 1652
BsrDI	GCAATG	1 cut(s)	1573
BsrFI	RCCGGY	1 cut(s)	2184
BsrGI	TGTACA	1 cut(s)	1981
BsrI	ACTGG	5 cut(s)	865, 1652, 1810, 1977, 2292
BssAI	RCCGGY	1 cut(s)	2184
BssECI	CCNNGG	1 cut(s)	543
BssMI	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
BssNI	GRCGYC	1 cut(s)	548
BssT1I	CCWWGG	1 cut(s)	543
Bst2UI	CCWGG	3 cut(s)	376, 777, 1527
Bst4CI	ACNGT	6 cut(s)	704, 947, 1436, 1682, 2071, 2096
Bst6I	CTCTTC	1 cut(s)	2217
BstACI	GRCGYC	1 cut(s)	548
BstAPI	GCANNNNNTGC	2 cut(s)	1374, 1584
BstAUI	TGTACA	1 cut(s)	1981
BstDSI	CCRYGG	1 cut(s)	543
BstEII	GGTNACC	1 cut(s)	2180
BstENI	CCTNNNNNAGG	1 cut(s)	1667
BstFNI	CGCG	1 cut(s)	73
BstH2I	RGCGCY	1 cut(s)	551
BstHHI	GCGC	2 cut(s)	75, 550
BstKTI	GATC	5 cut(s)	331, 691, 1177, 1213, 2008
BstMBI	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
BstNI	CCWGG	3 cut(s)	376, 777, 1527
BstPI	GGTNACC	1 cut(s)	2180
BstSCI	CCNGG	5 cut(s)	108, 374, 775, 1525, 1722
BstSLI	GKGCMC	1 cut(s)	716
BstUI	CGCG	1 cut(s)	73
BstV1I	GCAGC	6 cut(s)	33, 580, 583, 1480, 1945, 2407
BstV2I	GAAGAC	1 cut(s)	2345
BstXI	CCANNNNNNTGG	1 cut(s)	1580
Bsu36I	CCTNAGG	3 cut(s)	477, 1068, 1904
BsuRI	GGCC	6 cut(s)	38, 470, 541, 997, 1546, 1722
BtgI	CCRYGG	1 cut(s)	543
BtrI	CACGTC	1 cut(s)	79
BtsI	GCAGTG	1 cut(s)	31
BtsIMutI	CAGTG	3 cut(s)	31, 1984, 2043
BveI	ACCTGC	2 cut(s)	726, 1942
CaiI	CAGNNNCTG	3 cut(s)	155, 202, 596
CfoI	GCGC	2 cut(s)	75, 550
Cfr10I	RCCGGY	1 cut(s)	2184
Cfr13I	GGNCC	4 cut(s)	16, 540, 1529, 1544
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	5 cut(s)	825, 1096, 1982, 2072, 2140
CviAII	CATG	7 cut(s)	544, 1042, 1404, 1490, 1592, 2107, 2335
CviQI	GTAC	5 cut(s)	825, 1096, 1982, 2072, 2140
DinI	GGCGCC	1 cut(s)	549
DpnI	GATC	5 cut(s)	330, 690, 1176, 1212, 2007
DpnII	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
DraI	TTTAAA	2 cut(s)	366, 1717
DraIII	CACNNNGTG	1 cut(s)	2321
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	1 cut(s)	2217
EarI	CTCTTC	1 cut(s)	2217
Ecl136II	GAGCTC	1 cut(s)	2296
Eco130I	CCWWGG	1 cut(s)	543
Eco24I	GRGCYC	1 cut(s)	2298
Eco31I	GGTCTC	4 cut(s)	198, 365, 487, 1652
Eco47I	GGWCC	2 cut(s)	16, 1529
Eco53kI	GAGCTC	1 cut(s)	2296
Eco57I	CTGAAG	3 cut(s)	1133, 1770, 2148
Eco81I	CCTNAGG	3 cut(s)	477, 1068, 1904
Eco88I	CYCGRG	1 cut(s)	311
Eco91I	GGTNACC	1 cut(s)	2180
EcoICRI	GAGCTC	1 cut(s)	2296
EcoNI	CCTNNNNNAGG	1 cut(s)	1667
EcoO109I	RGGNCCY	1 cut(s)	1544
EcoO65I	GGTNACC	1 cut(s)	2180
EcoRI	GAATTC	2 cut(s)	316, 1005
EcoRII	CCWGG	3 cut(s)	374, 775, 1525
EcoT14I	CCWWGG	1 cut(s)	543
EcoT38I	GRGCYC	1 cut(s)	2298
EgeI	GGCGCC	1 cut(s)	549
EheI	GGCGCC	1 cut(s)	549
ErhI	CCWWGG	1 cut(s)	543
Esp3I	CGTCTC	3 cut(s)	39, 85, 2255
FaeI	CATG	7 cut(s)	547, 1045, 1407, 1493, 1595, 2110, 2338
FalI	AAGNNNNNCTT	4 cut(s)	287, 319, 1905, 1937
FaqI	GGGAC	2 cut(s)	1567, 1665
FatI	CATG	7 cut(s)	543, 1041, 1403, 1489, 1591, 2106, 2334
FauI	CCCGC	1 cut(s)	115
FbaI	TGATCA	1 cut(s)	688
Fnu4HI	GCNGC	7 cut(s)	22, 39, 594, 597, 1494, 1959, 2396
FriOI	GRGCYC	1 cut(s)	2298
Fsp4HI	GCNGC	7 cut(s)	22, 39, 594, 597, 1494, 1959, 2396
FspBI	CTAG	9 cut(s)	849, 900, 993, 1440, 1655, 1763, 1854, 2133, 2343
GlaI	GCGC	2 cut(s)	74, 549
GluI	GCNGC	7 cut(s)	22, 39, 594, 597, 1494, 1959, 2396
GsaI	CCCAGC	1 cut(s)	239
GsuI	CTGGAG	3 cut(s)	266, 939, 2309
HaeII	RGCGCY	1 cut(s)	551
HaeIII	GGCC	6 cut(s)	38, 470, 541, 997, 1546, 1722
HapII	CCGG	7 cut(s)	42, 110, 261, 998, 1049, 1723, 2185
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	2 cut(s)	75, 550
Hin1I	GRCGYC	1 cut(s)	548
Hin1II	CATG	7 cut(s)	547, 1045, 1407, 1493, 1595, 2110, 2338
Hin6I	GCGC	2 cut(s)	73, 548
HinP1I	GCGC	2 cut(s)	73, 548
HincII	GTYRAC	2 cut(s)	276, 567
HindII	GTYRAC	2 cut(s)	276, 567
HindIII	AAGCTT	2 cut(s)	443, 986
HpaI	GTTAAC	1 cut(s)	567
HpaII	CCGG	7 cut(s)	42, 110, 261, 998, 1049, 1723, 2185
HphI	GGTGA	7 cut(s)	20, 79, 416, 487, 1153, 1246, 2122
Hpy166II	GTNNAC	4 cut(s)	276, 567, 1982, 2315
Hpy8I	GTNNAC	4 cut(s)	276, 567, 1982, 2315
HpyCH4III	ACNGT	6 cut(s)	704, 947, 1436, 1682, 2071, 2096
HpyCH4IV	ACGT	4 cut(s)	78, 394, 563, 1326
HpySE526I	ACGT	4 cut(s)	78, 394, 563, 1326
Hsp92I	GRCGYC	1 cut(s)	548
Hsp92II	CATG	7 cut(s)	547, 1045, 1407, 1493, 1595, 2110, 2338
HspAI	GCGC	2 cut(s)	73, 548
KasI	GGCGCC	1 cut(s)	547
Ksp22I	TGATCA	1 cut(s)	688
KspAI	GTTAAC	1 cut(s)	567
Kzo9I	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
LmnI	GCTCC	5 cut(s)	199, 1051, 1060, 1672, 2293
Lsp1109I	GCAGC	6 cut(s)	33, 580, 583, 1480, 1945, 2407
LweI	GCATC	6 cut(s)	631, 786, 1554, 1574, 1780, 2337
MaeI	CTAG	9 cut(s)	849, 900, 993, 1440, 1655, 1763, 1854, 2133, 2343
MaeII	ACGT	4 cut(s)	78, 394, 563, 1326
MaeIII	GTNAC	6 cut(s)	8, 67, 803, 1361, 1442, 2180
MalI	GATC	5 cut(s)	330, 690, 1176, 1212, 2007
MboI	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
MfeI	CAATTG	1 cut(s)	1214
MhlI	GDGCHC	3 cut(s)	31, 716, 2298
Mly113I	GGCGCC	1 cut(s)	548
MlyI	GAGTC	1 cut(s)	1037
MmeI	TCCRAC	2 cut(s)	603, 1441
MroXI	GAANNNNTTC	3 cut(s)	817, 2029, 2239
MseI	TTAA	7 cut(s)	132, 365, 566, 1521, 1617, 1686, 1716
MslI	CAYNNNNRTG	1 cut(s)	1408
MspA1I	CMGCKG	1 cut(s)	593
MspI	CCGG	7 cut(s)	42, 110, 261, 998, 1049, 1723, 2185
MspR9I	CCNGG	5 cut(s)	110, 376, 777, 1527, 1724
MunI	CAATTG	1 cut(s)	1214
MvaI	CCWGG	3 cut(s)	376, 777, 1527
MvnI	CGCG	1 cut(s)	73
NarI	GGCGCC	1 cut(s)	548
NciI	CCSGG	2 cut(s)	110, 1724
NcoI	CCATGG	1 cut(s)	543
NdeII	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
NlaIII	CATG	7 cut(s)	547, 1045, 1407, 1493, 1595, 2110, 2338
NlaIV	GGNNCC	6 cut(s)	309, 549, 1047, 1106, 1487, 1545
NmuCI	GTSAC	3 cut(s)	8, 67, 1361
PdmI	GAANNNNTTC	3 cut(s)	817, 2029, 2239
PkrI	GCNGC	7 cut(s)	23, 40, 595, 598, 1495, 1960, 2397
PleI	GAGTC	1 cut(s)	1036
PluTI	GGCGCC	1 cut(s)	551
PpsI	GAGTC	1 cut(s)	1036
Psp124BI	GAGCTC	1 cut(s)	2298
Psp6I	CCWGG	3 cut(s)	374, 775, 1525
PspEI	GGTNACC	1 cut(s)	2180
PspFI	CCCAGC	1 cut(s)	235
PspGI	CCWGG	3 cut(s)	374, 775, 1525
PspN4I	GGNNCC	6 cut(s)	309, 549, 1047, 1106, 1487, 1545
PspPI	GGNCC	4 cut(s)	16, 540, 1529, 1544
PstNI	CAGNNNCTG	3 cut(s)	155, 202, 596
PvuII	CAGCTG	1 cut(s)	593
RsaI	GTAC	5 cut(s)	826, 1097, 1983, 2073, 2141
RsaNI	GTAC	5 cut(s)	825, 1096, 1982, 2072, 2140
RseI	CAYNNNNRTG	1 cut(s)	1408
SacI	GAGCTC	1 cut(s)	2298
SaqAI	TTAA	7 cut(s)	132, 365, 566, 1521, 1617, 1686, 1716
SatI	GCNGC	7 cut(s)	22, 39, 594, 597, 1494, 1959, 2396
Sau3AI	GATC	5 cut(s)	328, 688, 1174, 1210, 2005
Sau96I	GGNCC	4 cut(s)	16, 540, 1529, 1544
ScaI	AGTACT	1 cut(s)	1097
SchI	GAGTC	1 cut(s)	1037
ScrFI	CCNGG	5 cut(s)	110, 376, 777, 1527, 1724
SduI	GDGCHC	3 cut(s)	31, 716, 2298
SfaNI	GCATC	6 cut(s)	631, 786, 1554, 1574, 1780, 2337
SfoI	GGCGCC	1 cut(s)	549
SinI	GGWCC	2 cut(s)	16, 1529
SmiMI	CAYNNNNRTG	1 cut(s)	1408
SmlI	CTYRAG	3 cut(s)	446, 1099, 1160
SmoI	CTYRAG	3 cut(s)	446, 1099, 1160
SsiI	CCGC	6 cut(s)	19, 39, 122, 498, 1232, 1273
SspDI	GGCGCC	1 cut(s)	547
SspMI	CTAG	9 cut(s)	849, 900, 993, 1440, 1655, 1763, 1854, 2133, 2343
SstI	GAGCTC	1 cut(s)	2298
StyD4I	CCNGG	5 cut(s)	108, 374, 775, 1525, 1722
StyI	CCWWGG	1 cut(s)	543
TaaI	ACNGT	6 cut(s)	704, 947, 1436, 1682, 2071, 2096
TaiI	ACGT	4 cut(s)	81, 397, 566, 1329
TaqI	TCGA	5 cut(s)	666, 791, 811, 926, 1085
TaqII	GACCGA	1 cut(s)	2037
TatI	WGTACW	2 cut(s)	1095, 1981
TauI	GCSGC	1 cut(s)	41
Tru1I	TTAA	7 cut(s)	132, 365, 566, 1521, 1617, 1686, 1716
Tru9I	TTAA	7 cut(s)	132, 365, 566, 1521, 1617, 1686, 1716
TscAI	CASTG	3 cut(s)	31, 1984, 2050
TseFI	GTSAC	3 cut(s)	8, 67, 1361
TseI	GCWGC	6 cut(s)	21, 593, 596, 1493, 1958, 2395
Tsp45I	GTSAC	3 cut(s)	8, 67, 1361
TspDTI	ATGAA	3 cut(s)	719, 1392, 2351
TspGWI	ACGGA	4 cut(s)	2000, 2048, 2179, 2279
TspRI	CASTG	3 cut(s)	31, 1984, 2050
VpaK11BI	GGWCC	2 cut(s)	16, 1529
XagI	CCTNNNNNAGG	1 cut(s)	1667
XapI	RAATTY	5 cut(s)	316, 661, 1005, 1426, 2203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1496
XmnI	GAANNNNTTC	3 cut(s)	817, 2029, 2239
XspI	CTAG	9 cut(s)	849, 900, 993, 1440, 1655, 1763, 1854, 2133, 2343
ZrmI	AGTACT	1 cut(s)	1097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.