RING-like zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06320 FvH4_6g41400 |
| rosa_chinensis | RchiOBHm_Chr5g0012991 |
| rosa_laevigata | RLG00000031975 |
| rosa_multiflora | Rmu_sc0003892.1_g000024 Rmu_sc0005409.1_g000017 Rmu_sc0005409.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00062560 Rroxscaffold_1G00063580 Rroxscaffold_1G00063590 |
| rosa_rugosa | Rorug05G0005800 Rorug05G0005900 Rorug05G0006000 |
| rosa_samantha | Rh5BG096900 Rh5CG109100 |
| rosa_wichuraiana | Rw5G008760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 250 |
| AcoI | YGGCCR | 1 cut(s) | 247 |
| AfaI | GTAC | 1 cut(s) | 29 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 2 cut(s) | 19, 190 |
| AluI | AGCT | 2 cut(s) | 19, 190 |
| AoxI | GGCC | 3 cut(s) | 125, 135, 247 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| AsuHPI | GGTGA | 1 cut(s) | 221 |
| AsuII | TTCGAA | 1 cut(s) | 185 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BisI | GCNGC | 2 cut(s) | 90, 250 |
| BlsI | GCNGC | 2 cut(s) | 91, 251 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| Bpu14I | TTCGAA | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 2 cut(s) | 95, 172 |
| Bse3DI | GCAATG | 1 cut(s) | 45 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 2 cut(s) | 95, 172 |
| BseMI | GCAATG | 1 cut(s) | 45 |
| BseMII | CTCAG | 1 cut(s) | 104 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BshFI | GGCC | 3 cut(s) | 127, 137, 249 |
| BsnI | GGCC | 3 cut(s) | 127, 137, 249 |
| Bsp119I | TTCGAA | 1 cut(s) | 185 |
| BspACI | CCGC | 1 cut(s) | 250 |
| BspANI | GGCC | 3 cut(s) | 127, 137, 249 |
| BspCNI | CTCAG | 1 cut(s) | 105 |
| BspT104I | TTCGAA | 1 cut(s) | 185 |
| BsrDI | GCAATG | 1 cut(s) | 45 |
| BssECI | CCNNGG | 2 cut(s) | 95, 172 |
| BssT1I | CCWWGG | 1 cut(s) | 172 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| BstBI | TTCGAA | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 1 cut(s) | 247 |
| BstDEI | CTNAG | 1 cut(s) | 113 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BsuRI | GGCC | 3 cut(s) | 127, 137, 249 |
| Cac8I | GCNNGC | 1 cut(s) | 247 |
| Csp6I | GTAC | 1 cut(s) | 28 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 38 |
| CviAII | CATG | 1 cut(s) | 206 |
| CviJI | RGCY | 6 cut(s) | 19, 92, 127, 137, 190, 249 |
| CviKI_1 | RGCY | 6 cut(s) | 19, 92, 127, 137, 190, 249 |
| CviQI | GTAC | 1 cut(s) | 28 |
| DdeI | CTNAG | 1 cut(s) | 113 |
| EaeI | YGGCCR | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 1 cut(s) | 172 |
| Eco32I | GATATC | 2 cut(s) | 7, 35 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| EcoRV | GATATC | 2 cut(s) | 7, 35 |
| EcoT14I | CCWWGG | 1 cut(s) | 172 |
| ErhI | CCWWGG | 1 cut(s) | 172 |
| FaeI | CATG | 1 cut(s) | 209 |
| FaiI | YATR | 4 cut(s) | 85, 87, 207, 240 |
| FatI | CATG | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 2 cut(s) | 90, 250 |
| Fsp4HI | GCNGC | 2 cut(s) | 90, 250 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GluI | GCNGC | 2 cut(s) | 90, 250 |
| HaeIII | GGCC | 3 cut(s) | 127, 137, 249 |
| Hin1II | CATG | 1 cut(s) | 209 |
| HincII | GTYRAC | 1 cut(s) | 195 |
| HindII | GTYRAC | 1 cut(s) | 195 |
| HinfI | GANTC | 2 cut(s) | 100, 228 |
| HphI | GGTGA | 1 cut(s) | 221 |
| Hpy166II | GTNNAC | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 114 |
| Hpy8I | GTNNAC | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 50, 89 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 1 cut(s) | 113 |
| Hsp92II | CATG | 1 cut(s) | 209 |
| LpnPI | CCDG | 4 cut(s) | 119, 146, 231, 267 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MboII | GAAGA | 1 cut(s) | 46 |
| MnlI | CCTC | 3 cut(s) | 105, 138, 148 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NlaIII | CATG | 1 cut(s) | 209 |
| NspV | TTCGAA | 1 cut(s) | 185 |
| PfeI | GAWTC | 2 cut(s) | 100, 228 |
| PkrI | GCNGC | 2 cut(s) | 91, 251 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 29 |
| RsaNI | GTAC | 1 cut(s) | 28 |
| SatI | GCNGC | 2 cut(s) | 90, 250 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SetI | ASST | 4 cut(s) | 21, 192, 223, 264 |
| SfuI | TTCGAA | 1 cut(s) | 185 |
| SsiI | CCGC | 1 cut(s) | 250 |
| SspMI | CTAG | 1 cut(s) | 263 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| StyI | CCWWGG | 1 cut(s) | 172 |
| TaqI | TCGA | 1 cut(s) | 185 |
| TatI | WGTACW | 1 cut(s) | 27 |
| TauI | GCSGC | 1 cut(s) | 252 |
| TfiI | GAWTC | 2 cut(s) | 100, 228 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 2 cut(s) | 51, 194 |
| XspI | CTAG | 1 cut(s) | 263 |