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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06320 FvH4_6g41400 |
| rosa_chinensis | RchiOBHm_Chr5g0012991 |
| rosa_laevigata | RLG00000031975 |
| rosa_multiflora | Rmu_sc0003892.1_g000024 Rmu_sc0005409.1_g000017 Rmu_sc0005409.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00062560 Rroxscaffold_1G00063580 Rroxscaffold_1G00063590 |
| rosa_rugosa | Rorug05G0005800 Rorug05G0005900 Rorug05G0006000 |
| rosa_samantha | Rh5BG096900 Rh5CG109100 |
| rosa_wichuraiana | Rw5G008760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 300 |
| AccII | CGCG | 1 cut(s) | 17 |
| AciI | CCGC | 6 cut(s) | 17, 86, 131, 224, 255, 284 |
| AcoI | YGGCCR | 2 cut(s) | 162, 196 |
| AdeI | CACNNNGTG | 1 cut(s) | 336 |
| AfaI | GTAC | 3 cut(s) | 56, 117, 363 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 194 |
| Alw26I | GTCTC | 1 cut(s) | 169 |
| Ama87I | CYCGRG | 1 cut(s) | 300 |
| AoxI | GGCC | 6 cut(s) | 8, 93, 152, 162, 196, 260 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 127, 159 |
| AspS9I | GGNCC | 1 cut(s) | 260 |
| AsuHPI | GGTGA | 1 cut(s) | 454 |
| AvaI | CYCGRG | 1 cut(s) | 300 |
| BalI | TGGCCA | 1 cut(s) | 198 |
| BbsI | GAAGAC | 1 cut(s) | 137 |
| BccI | CCATC | 2 cut(s) | 34, 395 |
| BclI | TGATCA | 2 cut(s) | 321, 444 |
| BcoDI | GTCTC | 1 cut(s) | 169 |
| BisI | GCNGC | 1 cut(s) | 284 |
| BlsI | GCNGC | 1 cut(s) | 285 |
| BmcAI | AGTACT | 1 cut(s) | 56 |
| BmeT110I | CYCGRG | 1 cut(s) | 300 |
| BmgT120I | GGNCC | 1 cut(s) | 260 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmsI | GCATC | 1 cut(s) | 13 |
| BpiI | GAAGAC | 1 cut(s) | 137 |
| Bpu10I | CCTNAGC | 1 cut(s) | 386 |
| BpuEI | CTTGAG | 3 cut(s) | 22, 64, 217 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 2 cut(s) | 149, 263 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 456 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 194 |
| Bse1I | ACTGG | 3 cut(s) | 62, 199, 466 |
| BseDI | CCNNGG | 2 cut(s) | 149, 263 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 194 |
| BseNI | ACTGG | 3 cut(s) | 62, 199, 466 |
| BseYI | CCCAGC | 1 cut(s) | 257 |
| Bsh1236I | CGCG | 1 cut(s) | 17 |
| BshFI | GGCC | 6 cut(s) | 10, 95, 154, 164, 198, 262 |
| BsiHKCI | CYCGRG | 1 cut(s) | 300 |
| BslFI | GGGAC | 1 cut(s) | 236 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 194 |
| BsmAI | GTCTC | 1 cut(s) | 169 |
| BsmFI | GGGAC | 1 cut(s) | 236 |
| BsnI | GGCC | 6 cut(s) | 10, 95, 154, 164, 198, 262 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| BsoBI | CYCGRG | 1 cut(s) | 300 |
| Bsp143I | GATC | 2 cut(s) | 321, 444 |
| BspACI | CCGC | 6 cut(s) | 17, 86, 131, 224, 255, 284 |
| BspANI | GGCC | 6 cut(s) | 10, 95, 154, 164, 198, 262 |
| BspFNI | CGCG | 1 cut(s) | 17 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrI | ACTGG | 3 cut(s) | 62, 199, 466 |
| BssECI | CCNNGG | 2 cut(s) | 149, 263 |
| BssMI | GATC | 2 cut(s) | 321, 444 |
| Bst4CI | ACNGT | 4 cut(s) | 120, 180, 334, 433 |
| BstC8I | GCNNGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 1 cut(s) | 386 |
| BstDSI | CCRYGG | 2 cut(s) | 149, 263 |
| BstFNI | CGCG | 1 cut(s) | 17 |
| BstKTI | GATC | 2 cut(s) | 324, 447 |
| BstMAI | GTCTC | 1 cut(s) | 169 |
| BstMBI | GATC | 2 cut(s) | 321, 444 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 376 |
| BstUI | CGCG | 1 cut(s) | 17 |
| BstV2I | GAAGAC | 1 cut(s) | 137 |
| BsuRI | GGCC | 6 cut(s) | 10, 95, 154, 164, 198, 262 |
| BtgI | CCRYGG | 2 cut(s) | 149, 263 |
| BtsI | GCAGTG | 1 cut(s) | 475 |
| BtsIMutI | CAGTG | 3 cut(s) | 206, 330, 475 |
| Cac8I | GCNNGC | 1 cut(s) | 107 |
| Cfr13I | GGNCC | 1 cut(s) | 260 |
| Csp6I | GTAC | 3 cut(s) | 55, 116, 362 |
| CviAII | CATG | 2 cut(s) | 194, 325 |
| CviQI | GTAC | 3 cut(s) | 55, 116, 362 |
| DdeI | CTNAG | 1 cut(s) | 386 |
| DpnI | GATC | 2 cut(s) | 323, 446 |
| DpnII | GATC | 2 cut(s) | 321, 444 |
| DraIII | CACNNNGTG | 1 cut(s) | 336 |
| EaeI | YGGCCR | 2 cut(s) | 162, 196 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| Eco88I | CYCGRG | 1 cut(s) | 300 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 197, 328 |
| FaiI | YATR | 7 cut(s) | 161, 195, 209, 326, 368, 422, 475 |
| FaqI | GGGAC | 1 cut(s) | 236 |
| FatI | CATG | 2 cut(s) | 193, 324 |
| FauI | CCCGC | 3 cut(s) | 10, 138, 262 |
| FbaI | TGATCA | 2 cut(s) | 321, 444 |
| Fnu4HI | GCNGC | 1 cut(s) | 284 |
| Fsp4HI | GCNGC | 1 cut(s) | 284 |
| GluI | GCNGC | 1 cut(s) | 284 |
| GsaI | CCCAGC | 1 cut(s) | 261 |
| HaeIII | GGCC | 6 cut(s) | 10, 95, 154, 164, 198, 262 |
| Hin1II | CATG | 2 cut(s) | 197, 328 |
| HphI | GGTGA | 1 cut(s) | 454 |
| Hpy166II | GTNNAC | 2 cut(s) | 330, 362 |
| Hpy8I | GTNNAC | 2 cut(s) | 330, 362 |
| HpyCH4III | ACNGT | 4 cut(s) | 120, 180, 334, 433 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 379 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 376 |
| HpyF3I | CTNAG | 1 cut(s) | 386 |
| Hsp92II | CATG | 2 cut(s) | 197, 328 |
| Ksp22I | TGATCA | 2 cut(s) | 321, 444 |
| Kzo9I | GATC | 2 cut(s) | 321, 444 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| LpnPI | CCDG | 6 cut(s) | 24, 43, 168, 212, 243, 447 |
| LweI | GCATC | 1 cut(s) | 13 |
| MaeIII | GTNAC | 2 cut(s) | 180, 427 |
| MalI | GATC | 2 cut(s) | 323, 446 |
| MboI | GATC | 2 cut(s) | 321, 444 |
| MboII | GAAGA | 2 cut(s) | 137, 421 |
| MfeI | CAATTG | 1 cut(s) | 242 |
| MlsI | TGGCCA | 1 cut(s) | 198 |
| MluCI | AATT | 1 cut(s) | 242 |
| MluNI | TGGCCA | 1 cut(s) | 198 |
| MnlI | CCTC | 5 cut(s) | 46, 241, 296, 309, 458 |
| Mox20I | TGGCCA | 1 cut(s) | 198 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MscI | TGGCCA | 1 cut(s) | 198 |
| Msp20I | TGGCCA | 1 cut(s) | 198 |
| MspA1I | CMGCKG | 1 cut(s) | 257 |
| MunI | CAATTG | 1 cut(s) | 242 |
| MvnI | CGCG | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 376 |
| NdeII | GATC | 2 cut(s) | 321, 444 |
| NlaIII | CATG | 2 cut(s) | 197, 328 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NmeAIII | GCCGAG | 1 cut(s) | 190 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PaeR7I | CTCGAG | 1 cut(s) | 300 |
| PkrI | GCNGC | 1 cut(s) | 285 |
| PspFI | CCCAGC | 1 cut(s) | 257 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| PspPI | GGNCC | 1 cut(s) | 260 |
| PspXI | VCTCGAGB | 1 cut(s) | 300 |
| RsaI | GTAC | 3 cut(s) | 56, 117, 363 |
| RsaNI | GTAC | 3 cut(s) | 55, 116, 362 |
| SatI | GCNGC | 1 cut(s) | 284 |
| Sau3AI | GATC | 2 cut(s) | 321, 444 |
| Sau96I | GGNCC | 1 cut(s) | 260 |
| ScaI | AGTACT | 1 cut(s) | 56 |
| SetI | ASST | 2 cut(s) | 233, 301 |
| SfaNI | GCATC | 1 cut(s) | 13 |
| Sfr274I | CTCGAG | 1 cut(s) | 300 |
| SlaI | CTCGAG | 1 cut(s) | 300 |
| SmlI | CTYRAG | 4 cut(s) | 37, 79, 232, 300 |
| SmoI | CTYRAG | 4 cut(s) | 37, 79, 232, 300 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SsiI | CCGC | 6 cut(s) | 17, 86, 131, 224, 255, 284 |
| TaaI | ACNGT | 4 cut(s) | 120, 180, 334, 433 |
| TaqI | TCGA | 2 cut(s) | 213, 301 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 2 cut(s) | 54, 361 |
| TauI | GCSGC | 1 cut(s) | 286 |
| TscAI | CASTG | 3 cut(s) | 206, 337, 475 |
| TspGWI | ACGGA | 2 cut(s) | 138, 280 |
| TspRI | CASTG | 3 cut(s) | 206, 337, 475 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 147 |
| XhoI | CTCGAG | 1 cut(s) | 300 |
| ZrmI | AGTACT | 1 cut(s) | 56 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |