Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003818

Physical Location & Seq

Genomic Coordinates Reverse (-)

4590791 .. 4595584

Gene Structure 4794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0052600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGCCTGCCGAGACGCTCTCTCAGCACCCAAACGGCGCCGTCGCCAACGGCGATCTGAATCCGCTCGCTAACGGCGCCGTCAAAAAAGCGAGGGAGATCGAACGACGCCGTCGGAGGAGAAAGCAGAAGAAGAACCGCAAAGCTTCTCAATCCACCACCGCCAGCGACGTCAGCGACGGCGAAGATGTGAAGGAGAACAACGATCCTCAACAGGTTGTTGAGCAAGTTGAAATCGAGTATGTTCCAGAGAAAGCTGAGCTAAATGAAGACATGGATGAGGAGTTCAGGAAAATTTTTGAAAAATTCACATTCAAGAATGCTGCGGGTGTTGAGGAGGAAAAGAAAGATGAGTCTCAAGAAGGAGCCTCAAAGAAGAAGGCTGATTCAGATTCTGAAGAGGAGGAACAGGATAATGAACAAAAAGAGAAAGGCGTTTCAAACAAGAAGAAAAAGCTTCAACGGCGAATGAAGATTGCAGAATTGAAACAGATCTGTGCAAGGCCTGATGTTGTTGAGGTGTGGGATGCAACTGCAGCTGATCCTAAATTGCTGGTCTTTTTGAAATCGTACCGGAATACTGTACCGGTGCCAAGGCATTGGTGCCAGAAAAGGAAATTTTTACAGGGTAAACGTGGTATCGAGAAGCAACCGTTCCAGCTTCCTGATTTCATTGCTGCAACTGGAATTGAGAAAATTAGACAGGCATACATTGAAAAAGAAGATAGTAAGAAGTTGAAGCAAAAACAACGAGAACGTATGCAGCCAAAGATGGGCAAAATGGATATTGATTATCAGGTTCTTCATGATGCTTTCTTCAAGTACCAAACTAAGCCAAAGCTCACAACACTTGGTGATCTGTACCATGAAGGGAAAGAGTTTGAGGTAAAATTAAGAGAGATGAAGCCAGGCATGCTGTCACATGAACTGAAAGAAGCTCTGGGTATGCCAGATGGTGCTCCTCCCCCATGGCTCATTAATATGCAGAGATATGGTCCTCCTCCATCATATCCACATTTGAAAATCCCTGGGCTGAATGCTCCAATCCCCGCTGGAGCTAGCTTTGGTTATCATCCAGGTGGCTGGGGAAAGCCTCCTGTTGATGAATATGGCCAACCGTTGTATGGAGACGTTTTTGGTGTTCAGCAGCAAGATCAGCCTAATTATGAGGAAGAGCCAGTTGATAAGACAAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAAGAGGACGAGGAAGAGGAAGAACTGATGGAGGACGAAGATTTAGAGGATGGTATTGAATCTGTAGATAGCATTTCAAGTACTCCCACTGGCGTTGAGACACCTGATGTCATGGACCTTCGCAAGCTTCAGAGAAAGGAACCTGAAAGGCCTTTATACCAAGTACTTGAAGAGAAAGAAGAAAGGGTTGCCTCAGGGACATTGCTTGGAACGACTCACACCTATGTTGTTGGTAGTGGCACGCAAGACAAAGCAGGAGCTAAAAGGGTGGATCTACTCCGAGGTCAGAAAGCAGATAAAGTGGATGTCACTCTACAACCTGAAGAATTGGAAGCTATGGAGAATGTCTTGCCTGAAAAGTATGAACAAGCAAGGGAGGAGGAGAAGCTGCGGAGTCAGCGAGAGGATTTCAGTGATATGGTTGCGGAGAATGAGAAGAAGAGGAAACGTAAGATGCAGGACAAGGAAGGGAAATCCAACAAAAAGAAAGATTTCAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RVT_3 zf-C3HC4

Protein Analysis

575

Amino Acids

66.1

Weight (kDa)

5.28

Isoelectric Point (pI)

57.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF382	PF04037	167 - 292	8.6e-60	Domain of unknown function (DUF382)
PSP	PF04046	301 - 346	9.9e-23	PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19670 AT4G19670 AT4G19670 AT4G19670 AT4G19670 AT4G19670 AT4G19670
fragaria_vesca	FvH4_3g12010 FvH4_3g12010 FvH4_3g12010 FvH4_3g12010
malus_domestica	MD05G1255900.v1.1 MD10G1236000.v1.1 MD10G1236100.v1.1
prunus_persica	Prupe.4G108300_v2.0.a1 Prupe.4G108300_v2.0.a1 Prupe.4G108300_v2.0.a1 Prupe.4G108300_v2.0.a1
pyrus_communis	pycom05g23470 pycom10g19720 pycom10g19730
rosa_chinensis	RchiOBHm_Chr5g0019691
rosa_laevigata	RLG00000032461
rosa_multiflora	Rmu_co8286553.1_g000001 Rmu_sc0012330.1_g000002
rosa_roxburghii	Rroxscaffold_1G00058420
rosa_rugosa	Rorug05G0052500 Rorug05G0052500 Rorug05G0052600
rosa_samantha	Rh5AG143300 Rh5BG141900 Rh5CG153800 Rh5DG142500
rosa_wichuraiana	Rw5G012700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	171
AccB1I	GGYRCC	4 cut(s)	35, 74, 586, 600
AccBSI	CCGCTC	1 cut(s)	64
AciI	CCGC	7 cut(s)	62, 136, 159, 323, 1047, 1615, 1649
AclWI	GGATC	3 cut(s)	197, 533, 1503
AcoI	YGGCCR	1 cut(s)	1108
AcsI	RAATTY	3 cut(s)	291, 302, 614
AcuI	CTGAAG	3 cut(s)	414, 1337, 1566
AcyI	GRCGYC	4 cut(s)	36, 75, 106, 168
AdeI	CACNNNGTG	1 cut(s)	851
AfaI	GTAC	6 cut(s)	569, 582, 821, 860, 1306, 1389
AfiI	CCNNNNNNNGG	2 cut(s)	770, 1121
AgeI	ACCGGT	1 cut(s)	583
AjnI	CCWGG	3 cut(s)	904, 1024, 1072
AloI	GAACNNNNNNTCC	2 cut(s)	266, 298
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	4 cut(s)	5, 357, 1119, 1316
AlwI	GGATC	3 cut(s)	197, 533, 1503
AlwNI	CAGNNNCTG	1 cut(s)	392
AoxI	GGCC	3 cut(s)	500, 1108, 1373
ApeKI	GCWGC	6 cut(s)	320, 533, 674, 760, 1144, 1612
ApoI	RAATTY	3 cut(s)	291, 302, 614
AseI	ATTAAT	1 cut(s)	975
AsiGI	ACCGGT	1 cut(s)	583
Asp700I	GAANNNNTTC	1 cut(s)	1715
AspLEI	GCGC	2 cut(s)	38, 77
AspS9I	GGNCC	2 cut(s)	992, 1339
AsuHPI	GGTGA	2 cut(s)	863, 1211
AsuNHI	GCTAGC	1 cut(s)	1055
AvaII	GGWCC	2 cut(s)	992, 1339
AxyI	CCTNAGG	1 cut(s)	1417
BalI	TGGCCA	1 cut(s)	1110
BanI	GGYRCC	4 cut(s)	35, 74, 586, 600
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	6 cut(s)	307, 545, 661, 772, 1156, 1599
BccI	CCATC	5 cut(s)	763, 944, 1009, 1246, 1268
BceAI	ACGGC	8 cut(s)	23, 49, 62, 64, 88, 93, 193, 476
BciT130I	CCWGG	3 cut(s)	906, 1026, 1074
BcoDI	GTCTC	4 cut(s)	5, 357, 1119, 1316
BfaI	CTAG	1 cut(s)	1056
BfmI	CTRYAG	2 cut(s)	531, 1287
BfoI	RGCGCY	2 cut(s)	39, 78
BglII	AGATCT	1 cut(s)	489
BisI	GCNGC	6 cut(s)	321, 534, 675, 761, 1145, 1613
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	6 cut(s)	322, 535, 676, 762, 1146, 1614
BmcAI	AGTACT	2 cut(s)	1306, 1389
Bme1390I	CCNGG	3 cut(s)	906, 1026, 1074
Bme18I	GGWCC	2 cut(s)	992, 1339
BmgT120I	GGNCC	2 cut(s)	992, 1339
BmiI	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1365
BmrFI	CCNGG	3 cut(s)	906, 1026, 1074
BmsI	GCATC	3 cut(s)	514, 796, 1668
BmtI	GCTAGC	1 cut(s)	1059
BpiI	GAAGAC	1 cut(s)	273
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	1071
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	339
BsaBI	GATNNNNATC	1 cut(s)	57
BsaHI	GRCGYC	4 cut(s)	36, 75, 106, 168
BsaJI	CCNNGG	5 cut(s)	590, 965, 1024, 1025, 1504
BsaWI	WCCGGW	2 cut(s)	570, 583
Bsc4I	CCNNNNNNNGG	2 cut(s)	770, 1121
Bse118I	RCCGGY	1 cut(s)	583
Bse1I	ACTGG	3 cut(s)	685, 1175, 1318
Bse21I	CCTNAGG	1 cut(s)	1417
Bse3DI	GCAATG	2 cut(s)	669, 1424
Bse8I	GATNNNNATC	1 cut(s)	57
BseBI	CCWGG	3 cut(s)	906, 1026, 1074
BseDI	CCNNGG	5 cut(s)	590, 965, 1024, 1025, 1504
BseGI	GGATG	5 cut(s)	280, 529, 1069, 1279, 1534
BseJI	GATNNNNATC	1 cut(s)	57
BseLI	CCNNNNNNNGG	2 cut(s)	770, 1121
BseMI	GCAATG	2 cut(s)	669, 1424
BseMII	CTCAG	3 cut(s)	35, 246, 1431
BseNI	ACTGG	3 cut(s)	685, 1175, 1318
BseRI	GAGGAG	8 cut(s)	130, 293, 347, 413, 948, 987, 1616, 1619
BseXI	GCAGC	6 cut(s)	307, 545, 661, 772, 1156, 1599
BseYI	CCCAGC	1 cut(s)	1080
BshFI	GGCC	3 cut(s)	502, 1110, 1375
BshNI	GGYRCC	4 cut(s)	35, 74, 586, 600
BshTI	ACCGGT	1 cut(s)	583
BsiHKAI	GWGCWC	1 cut(s)	958
BsiSI	CCGG	2 cut(s)	571, 584
BslFI	GGGAC	1 cut(s)	1435
BslI	CCNNNNNNNGG	2 cut(s)	770, 1121
BsmAI	GTCTC	4 cut(s)	5, 357, 1119, 1316
BsmBI	CGTCTC	2 cut(s)	5, 1119
BsmFI	GGGAC	1 cut(s)	1435
BsmI	GAATGC	2 cut(s)	322, 1039
BsnI	GGCC	3 cut(s)	502, 1110, 1375
Bsp1286I	GDGCHC	1 cut(s)	958
Bsp143I	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	1 cut(s)	965
BspACI	CCGC	7 cut(s)	62, 136, 159, 323, 1047, 1615, 1649
BspANI	GGCC	3 cut(s)	502, 1110, 1375
BspCNI	CTCAG	3 cut(s)	34, 247, 1430
BspHI	TCATGA	1 cut(s)	802
BspLI	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1365
BspMAI	CTGCAG	1 cut(s)	535
BspOI	GCTAGC	1 cut(s)	1059
BspPI	GGATC	3 cut(s)	197, 533, 1503
BspQI	GCTCTTC	1 cut(s)	1164
BspT107I	GGYRCC	4 cut(s)	35, 74, 586, 600
BsrBI	CCGCTC	1 cut(s)	64
BsrDI	GCAATG	2 cut(s)	669, 1424
BsrFI	RCCGGY	1 cut(s)	583
BsrI	ACTGG	3 cut(s)	685, 1175, 1318
BssAI	RCCGGY	1 cut(s)	583
BssECI	CCNNGG	5 cut(s)	590, 965, 1024, 1025, 1504
BssMI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
BssNI	GRCGYC	4 cut(s)	36, 75, 106, 168
BssT1I	CCWWGG	2 cut(s)	590, 965
Bst2UI	CCWGG	3 cut(s)	906, 1026, 1074
Bst4CI	ACNGT	3 cut(s)	580, 651, 1116
Bst6I	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1389, 1658
BstACI	GRCGYC	4 cut(s)	36, 75, 106, 168
BstC8I	GCNNGC	7 cut(s)	6, 66, 163, 911, 1057, 1349, 1466
BstDEI	CTNAG	4 cut(s)	21, 255, 828, 1417
BstDSI	CCRYGG	1 cut(s)	965
BstF5I	GGATG	5 cut(s)	280, 529, 1069, 1279, 1534
BstH2I	RGCGCY	2 cut(s)	39, 78
BstHHI	GCGC	2 cut(s)	38, 77
BstKTI	GATC	8 cut(s)	55, 99, 205, 492, 541, 856, 1153, 1498
BstMAI	GTCTC	4 cut(s)	5, 357, 1119, 1316
BstMBI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1621
BstNI	CCWGG	3 cut(s)	906, 1026, 1074
BstNSI	RCATGY	1 cut(s)	913
BstSCI	CCNGG	3 cut(s)	904, 1024, 1072
BstSFI	CTRYAG	2 cut(s)	531, 1287
BstV1I	GCAGC	6 cut(s)	307, 545, 661, 772, 1156, 1599
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	2 cut(s)	489, 1495
BstXI	CCANNNNNNTGG	2 cut(s)	597, 1080
BstYI	RGATCY	2 cut(s)	489, 1495
Bsu36I	CCTNAGG	1 cut(s)	1417
BsuRI	GGCC	3 cut(s)	502, 1110, 1375
BtgI	CCRYGG	1 cut(s)	965
BtsCI	GGATG	5 cut(s)	280, 529, 1069, 1279, 1534
BtsIMutI	CAGTG	2 cut(s)	1311, 1642
Cac8I	GCNNGC	7 cut(s)	6, 66, 163, 911, 1057, 1349, 1466
CaiI	CAGNNNCTG	1 cut(s)	392
CciI	TCATGA	1 cut(s)	802
CfoI	GCGC	2 cut(s)	38, 77
Cfr10I	RCCGGY	1 cut(s)	583
Cfr13I	GGNCC	2 cut(s)	992, 1339
CseI	GACGC	2 cut(s)	22, 114
Csp6I	GTAC	6 cut(s)	568, 581, 820, 859, 1305, 1388
CspAI	ACCGGT	1 cut(s)	583
CspCI	CAANNNNNGTGG	2 cut(s)	1300, 1335
CviAII	CATG	7 cut(s)	271, 803, 863, 910, 920, 966, 1336
CviQI	GTAC	6 cut(s)	568, 581, 820, 859, 1305, 1388
DdeI	CTNAG	4 cut(s)	21, 255, 828, 1417
DinI	GGCGCC	2 cut(s)	37, 76
DpnI	GATC	8 cut(s)	54, 98, 204, 491, 540, 855, 1152, 1497
DpnII	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
DraIII	CACNNNGTG	1 cut(s)	851
EaeI	YGGCCR	1 cut(s)	1108
Eam1104I	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1389, 1658
EarI	CTCTTC	8 cut(s)	390, 1164, 1206, 1212, 1221, 1233, 1389, 1658
Eco130I	CCWWGG	2 cut(s)	590, 965
Eco147I	AGGCCT	2 cut(s)	502, 1375
Eco47I	GGWCC	2 cut(s)	992, 1339
Eco57I	CTGAAG	3 cut(s)	414, 1337, 1566
Eco81I	CCTNAGG	1 cut(s)	1417
EcoRII	CCWGG	3 cut(s)	904, 1024, 1072
EcoT14I	CCWWGG	2 cut(s)	590, 965
EgeI	GGCGCC	2 cut(s)	37, 76
EheI	GGCGCC	2 cut(s)	37, 76
ErhI	CCWWGG	2 cut(s)	590, 965
Esp3I	CGTCTC	2 cut(s)	5, 1119
FaeI	CATG	7 cut(s)	274, 806, 866, 913, 923, 969, 1339
FaqI	GGGAC	1 cut(s)	1435
FatI	CATG	7 cut(s)	270, 802, 862, 909, 919, 965, 1335
FauI	CCCGC	2 cut(s)	316, 1054
Fnu4HI	GCNGC	6 cut(s)	321, 534, 675, 761, 1145, 1613
FokI	GGATG	5 cut(s)	287, 536, 1056, 1286, 1541
Fsp4HI	GCNGC	6 cut(s)	321, 534, 675, 761, 1145, 1613
FspBI	CTAG	1 cut(s)	1056
GlaI	GCGC	2 cut(s)	37, 76
GluI	GCNGC	6 cut(s)	321, 534, 675, 761, 1145, 1613
GsaI	CCCAGC	1 cut(s)	1084
GsuI	CTGGAG	1 cut(s)	1071
HaeII	RGCGCY	2 cut(s)	39, 78
HaeIII	GGCC	3 cut(s)	502, 1110, 1375
HapII	CCGG	2 cut(s)	571, 584
HgaI	GACGC	2 cut(s)	22, 114
HhaI	GCGC	2 cut(s)	38, 77
Hin1I	GRCGYC	4 cut(s)	36, 75, 106, 168
Hin1II	CATG	7 cut(s)	274, 806, 866, 913, 923, 969, 1339
Hin6I	GCGC	2 cut(s)	36, 75
HinP1I	GCGC	2 cut(s)	36, 75
HindIII	AAGCTT	3 cut(s)	141, 452, 1349
HinfI	GANTC	7 cut(s)	58, 350, 383, 389, 1283, 1438, 1618
HpaII	CCGG	2 cut(s)	571, 584
HphI	GGTGA	2 cut(s)	863, 1211
Hpy166II	GTNNAC	1 cut(s)	629
Hpy188I	TCNGA	7 cut(s)	57, 114, 388, 394, 1356, 1505, 1512
Hpy188III	TCNNGA	7 cut(s)	245, 286, 313, 356, 640, 662, 803
Hpy8I	GTNNAC	1 cut(s)	629
Hpy99I	CGWCG	5 cut(s)	44, 108, 114, 170, 179
HpyAV	CCTTC	6 cut(s)	184, 353, 370, 860, 1352, 1685
HpyCH4III	ACNGT	3 cut(s)	580, 651, 1116
HpyCH4IV	ACGT	5 cut(s)	168, 631, 754, 1128, 1672
HpyCH4V	TGCA	8 cut(s)	476, 497, 527, 533, 677, 760, 982, 1681
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1621
HpyF3I	CTNAG	4 cut(s)	21, 255, 828, 1417
HpySE526I	ACGT	5 cut(s)	168, 631, 754, 1128, 1672
Hsp92I	GRCGYC	4 cut(s)	36, 75, 106, 168
Hsp92II	CATG	7 cut(s)	274, 806, 866, 913, 923, 969, 1339
HspAI	GCGC	2 cut(s)	36, 75
KasI	GGCGCC	2 cut(s)	35, 74
Kzo9I	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
LguI	GCTCTTC	1 cut(s)	1164
LmnI	GCTCC	5 cut(s)	362, 961, 1042, 1052, 1481
Lsp1109I	GCAGC	6 cut(s)	307, 545, 661, 772, 1156, 1599
LweI	GCATC	3 cut(s)	514, 796, 1668
MaeI	CTAG	1 cut(s)	1056
MaeII	ACGT	5 cut(s)	168, 631, 754, 1128, 1672
MaeIII	GTNAC	2 cut(s)	915, 1531
MalI	GATC	8 cut(s)	54, 98, 204, 491, 540, 855, 1152, 1497
MbiI	CCGCTC	1 cut(s)	64
MboI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
MflI	RGATCY	2 cut(s)	489, 1495
MhlI	GDGCHC	1 cut(s)	958
MlsI	TGGCCA	1 cut(s)	1110
MluNI	TGGCCA	1 cut(s)	1110
Mly113I	GGCGCC	2 cut(s)	36, 75
MlyI	GAGTC	3 cut(s)	359, 1432, 1627
MmeI	TCCRAC	2 cut(s)	92, 1725
Mox20I	TGGCCA	1 cut(s)	1110
MroXI	GAANNNNTTC	1 cut(s)	1715
MscI	TGGCCA	1 cut(s)	1110
MseI	TTAA	2 cut(s)	890, 975
MslI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1446
Msp20I	TGGCCA	1 cut(s)	1110
MspA1I	CMGCKG	2 cut(s)	536, 1049
MspI	CCGG	2 cut(s)	571, 584
MspR9I	CCNGG	3 cut(s)	906, 1026, 1074
Mva1269I	GAATGC	2 cut(s)	322, 1039
MvaI	CCWGG	3 cut(s)	906, 1026, 1074
MwoI	GCNNNNNNNGC	8 cut(s)	22, 74, 171, 460, 533, 910, 1153, 1621
NarI	GGCGCC	2 cut(s)	36, 75
NcoI	CCATGG	1 cut(s)	965
NdeII	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
NheI	GCTAGC	1 cut(s)	1055
NlaIII	CATG	7 cut(s)	274, 806, 866, 913, 923, 969, 1339
NlaIV	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1365
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	2 cut(s)	915, 1531
NspI	RCATGY	1 cut(s)	913
PaeI	GCATGC	1 cut(s)	913
PagI	TCATGA	1 cut(s)	802
PasI	CCCWGGG	1 cut(s)	1025
PceI	AGGCCT	2 cut(s)	502, 1375
PciSI	GCTCTTC	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	2 cut(s)	322, 1039
PdmI	GAANNNNTTC	1 cut(s)	1715
PfeI	GAWTC	4 cut(s)	58, 383, 389, 1283
PflFI	GACNNNGTC	1 cut(s)	108
PinAI	ACCGGT	1 cut(s)	583
PkrI	GCNGC	6 cut(s)	322, 535, 676, 762, 1146, 1614
PleI	GAGTC	3 cut(s)	358, 1432, 1626
PluTI	GGCGCC	2 cut(s)	39, 78
PpsI	GAGTC	3 cut(s)	358, 1432, 1626
PshBI	ATTAAT	1 cut(s)	975
Psp6I	CCWGG	3 cut(s)	904, 1024, 1072
PspFI	CCCAGC	1 cut(s)	1080
PspGI	CCWGG	3 cut(s)	904, 1024, 1072
PspN4I	GGNNCC	6 cut(s)	37, 76, 364, 588, 602, 1365
PspPI	GGNCC	2 cut(s)	992, 1339
PstI	CTGCAG	1 cut(s)	535
PstNI	CAGNNNCTG	1 cut(s)	392
PsuI	RGATCY	2 cut(s)	489, 1495
PsyI	GACNNNGTC	1 cut(s)	108
PvuII	CAGCTG	1 cut(s)	536
RsaI	GTAC	6 cut(s)	569, 582, 821, 860, 1306, 1389
RsaNI	GTAC	6 cut(s)	568, 581, 820, 859, 1305, 1388
RseI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1446
SapI	GCTCTTC	1 cut(s)	1164
SaqAI	TTAA	2 cut(s)	890, 975
SatI	GCNGC	6 cut(s)	321, 534, 675, 761, 1145, 1613
Sau3AI	GATC	8 cut(s)	52, 96, 202, 489, 538, 853, 1150, 1495
Sau96I	GGNCC	2 cut(s)	992, 1339
ScaI	AGTACT	2 cut(s)	1306, 1389
SchI	GAGTC	3 cut(s)	359, 1432, 1627
ScrFI	CCNGG	3 cut(s)	906, 1026, 1074
SduI	GDGCHC	1 cut(s)	958
SfaNI	GCATC	3 cut(s)	514, 796, 1668
SfcI	CTRYAG	2 cut(s)	531, 1287
SfoI	GGCGCC	2 cut(s)	37, 76
SinI	GGWCC	2 cut(s)	992, 1339
SmiMI	CAYNNNNRTG	4 cut(s)	977, 1074, 1197, 1446
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SphI	GCATGC	1 cut(s)	913
SseBI	AGGCCT	2 cut(s)	502, 1375
SsiI	CCGC	7 cut(s)	62, 136, 159, 323, 1047, 1615, 1649
SspDI	GGCGCC	2 cut(s)	35, 74
SspMI	CTAG	1 cut(s)	1056
StuI	AGGCCT	2 cut(s)	502, 1375
StyD4I	CCNGG	3 cut(s)	904, 1024, 1072
StyI	CCWWGG	2 cut(s)	590, 965
TaaI	ACNGT	3 cut(s)	580, 651, 1116
TaiI	ACGT	5 cut(s)	171, 634, 757, 1131, 1675
TaqI	TCGA	3 cut(s)	99, 234, 639
TatI	WGTACW	2 cut(s)	1304, 1387
TfiI	GAWTC	4 cut(s)	58, 383, 389, 1283
Tru1I	TTAA	2 cut(s)	890, 975
Tru9I	TTAA	2 cut(s)	890, 975
TscAI	CASTG	2 cut(s)	1318, 1642
TseFI	GTSAC	2 cut(s)	915, 1531
TseI	GCWGC	6 cut(s)	320, 533, 674, 760, 1144, 1612
Tsp45I	GTSAC	2 cut(s)	915, 1531
TspRI	CASTG	2 cut(s)	1318, 1642
Tth111I	GACNNNGTC	1 cut(s)	108
VpaK11BI	GGWCC	2 cut(s)	992, 1339
VspI	ATTAAT	1 cut(s)	975
XapI	RAATTY	3 cut(s)	291, 302, 614
XceI	RCATGY	1 cut(s)	913
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1118
XmnI	GAANNNNTTC	1 cut(s)	1715
XspI	CTAG	1 cut(s)	1056
ZraI	GACGTC	1 cut(s)	169
ZrmI	AGTACT	2 cut(s)	1306, 1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.