Rorug05G0096600
NAC Family

Photosystem II 10 kDa polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0011962
Physical Location & Seq
Forward (+)
8555132 .. 8561634
6503 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0096600.1

Sequence Viewer

Length: 2499 bp
ATGAGCGGGAGAGGCGGCGGCAATGGGAAGGGCAATACTGGAATATCGGGAATACCAGCTGGGTCCCGGAAGATGGTTCAGAGCTTGAAAGAGATAGTCAATAACTGCACTGAGCAGGAGATCTATGCTATGCTTAAAGACTGTAACATGGACCCTAATGAAGCCGTTAATCGTCTCCTAGCTCAAGATCCTTTCCATGAAGTGAAGAGCAAACGAGAGAAGAAAAAGGAGAGTAAGGAGCCAACGGATTCTAGGTCTCGCGGTGCTAATATTTCAAATCATGGTGGTAGAGGTGGTGATCGTTATGCTGCACGTGGCGGATCAAACCACTTTAGCACAAATGAGTCTGGTTCTTTGCATGGTAGACCTGCGTACAGAAAGGAAAATGGAACACCTGCCTATGCAGGTTCTTCCTCTTCTGCAGCTGGCACAACTGGATATAACTTGAGCCGACGACCTCCATCCTACAGTGATCCAGTGGCAGCTGAAAATAAAATTATGTCAGTAGGTGATGATGGAATATCTTCATCCTCACAGCCTTCCACTGGATATCAGTCTGCATGGGGAGGGGTGCCAGGTCAAGTTTCAATGGCTGACATTGTTAAGAAGGGTAGGCCGCAAGCCAAGGCACCCCCAACTTATAGTGTCAATCATCATGATTCAGGGGCACCTCCTGCAGCAGGATACAATTCAAATTCATCGCAGACTGAGCCCTTGGCTGATGAGTGGCCCTTGATTGAGCATCCTCCAGGTGTTAGCATGTCCTCCATTTTAGGGGCACCTGCAAATTCTGAGCTCTATGCTAATTCATCTAGCGTGCCCTTGGATAAAGCTAATCAGCATATAAAATCCCAACTAGATGAGGTTGAGACGGAAGATGATGGTTCTGTCGAGGCACTGAATACAAGCCATGATGGACCTACTTCTGTTTCCGGTAGAAATGTGCAAGAAGATAACTCGGCAACTGCATCTGCTTTTGATGATAGCTTGTATGAGGATATCAATTCCTACCATCCAGAGAGACATGACCTTGAGGATAATGAAGCTGAGCATGATGCTTCATCAGTGGCTGCAAACTTGCAGCAGCTTGACTTACAGAAGGATGATAGGGGAGCACCACCTGAAGACGAGAACCCTCCCCCTGTAGTCATTCCAAATCACCTACAACTTCATACTCCAGACTGCTTGCACTTGAGCTTTGGAAGTTTCCGATCCGGCCCTGAGCCTGATCTTTCGAGCTCCCATCCAGTGAAAAGTGACTTGGAAGAGACATCTGTAGCAGTAGATGTTTCTGCAGTCGGGCACTCAGATGCTAGAAATCCCGACTACTATGGAGATGAGCATCTCATAAATACCTCTGATGGAAGTTTGGTTCATAGAACTGGGGCCAGTGCTGGAGATTATGATTCTCCTTCAGTGTCACAACCAGAGGTCTTAAAACAGGAAACCCCTGAAGCTGGTCAGGGCATTCAATATACTTTTCCTTCTGCACCTGGATTTGCATATGACAGCTCCCAACAATTGAATATGGCATTTTCTCACCCACAGAGCTCACAAGTACAAAACAATGCTCCCTTTTCAAGTGTGATGGGATATACGAATTCGTTGCCTAGCACTCTATTGGCTTCAAATGCTCAGAATGTAAGGGAGGATCTTCCATACTCACCTTTCCCTGTGACACAATCTATGCCTACAAAATATAGCAATGTGCCTTCTTCCATCAGCGGTCCCACCATGTCCATGCCAGAGGCTTTGAGGGCAGGTGGTATCTCTTCTGCTCAACCTACTCAACAGACCCTACCTGGTGCTGGTGTCGCGACTGGACCTGCTCTTCCACAACAGCTGTTGCACCCTTACTCTCAACCTAGTCTTCCTTTGGGACATTTTTCCAACATGATTGGTTATCCTTTCTTGCCTCAGAGCTACACATATATGCCATCAGCATTCCAGCAAGCTTTTGCTGGTAACAGCACATACCATCAGTCGCTGGCTGCAGTTCTTCCACAGTATAAAAATAGTGTTTCTGTCAGCAGTTTGCCCCAGTCTGCTAATATTCCCTCTGGTTATGGGTTTGGTAGTTCAAGTAACATTCCTGGAGGAAACTTTCCTCTGAATCCACCGTCGGCACCTACCGGTACAACAATTGGTTATGATGATGTTATAAGCTCTCAGTACAAGGACAGTAACCATTTGATGTCACTTCAGCAGAATGACAACTCAGGCATGTGGGTTCACGGACCTGGTTCCCGAGCAATGCCTGCTGTTCCAGCCAGCAATTATTACAGCTTCCAGGGGCAGAATCAACAGCATGCTGGTTTCCGGCAAACCCAGCAACCGTCGCAGCAATTTGCTGGAGCTCTAAACTACCCGAACTTCTATCATTCTCAGACAGGGATGTCCCTCGATCATCAACAGCAAAGTTCAAGGGACGCATCCCTGGGTGGCTCACAGGGACAACCTTCTAAGCAGTCTCAACAATTATGGCAAAACAGCTACTAA

Protein Analysis

832

Amino Acids

88.54

Weight (kDa)

5.22

Isoelectric Point (pI)

62.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 18 - 77 9.2e-34 GBF-interacting protein 1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011962)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56010 AT1G56010 AT3G12977 AT3G12977
fragaria_vesca FvH4_3g16040
malus_domestica MD10G1198400.v1.1
prunus_persica Prupe.4G143600_v2.0.a1
pyrus_communis pycom05g19830 pycom10g17110
rosa_chinensis RchiOBHm_Chr5g0027011
rosa_laevigata RLG00000032977 RLG00000032981
rosa_multiflora Rmu_sc0000882.1_g000012
rosa_roxburghii Rroxscaffold_1G00052480
rosa_rugosa Rorug05G0096600
rosa_samantha Rh5AG190000 Rh5BG187600 Rh5CG207400
rosa_wichuraiana Rw5G017300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2162
AarI CACCTGC 3 cut(s) 403, 790, 1751
AasI GACNNNNNNGTC 1 cut(s) 2395
Acc36I ACCTGC 6 cut(s) 376, 395, 403, 790, 1751, 1834
AccB1I GGYRCC 5 cut(s) 571, 628, 667, 778, 2125
AccBSI CCGCTC 1 cut(s) 6
AccI GTMKAC 1 cut(s) 364
AccII CGCG 2 cut(s) 261, 1817
AciI CCGC 7 cut(s) 6, 15, 18, 261, 318, 617, 1725
AclWI GGATC 5 cut(s) 182, 328, 467, 1206, 1659
AcsI RAATTY 3 cut(s) 694, 787, 1600
AcuI CTGAAG 4 cut(s) 1143, 1398, 1473, 2186
AcvI CACGTG 1 cut(s) 314
AfaI GTAC 4 cut(s) 374, 1560, 2137, 2174
AfiI CCNNNNNNNGG 6 cut(s) 73, 545, 680, 774, 1457, 1808
AgeI ACCGGT 1 cut(s) 2132
AjnI CCWGG 8 cut(s) 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
AjuI GAANNNNNNNTTGG 2 cut(s) 1244, 1276
AloI GAACNNNNNNTCC 2 cut(s) 1356, 1388
Alw21I GWGCWC 5 cut(s) 798, 1117, 1241, 1553, 2359
Alw26I GTCTC 6 cut(s) 179, 261, 863, 1015, 1262, 2475
AlwI GGATC 5 cut(s) 182, 328, 467, 1206, 1659
AlwNI CAGNNNCTG 2 cut(s) 1070, 1987
Ama87I CYCGRG 1 cut(s) 2247
AoxI GGCC 4 cut(s) 614, 728, 1216, 1386
ApeKI GCWGC 9 cut(s) 308, 422, 482, 677, 1070, 1081, 1084, 1991, 2341
ApoI RAATTY 3 cut(s) 694, 787, 1600
AsiGI ACCGGT 1 cut(s) 2132
Asp700I GAANNNNTTC 1 cut(s) 523
AspS9I GGNCC 9 cut(s) 63, 151, 729, 917, 1217, 1386, 1727, 1823, 2237
AsuC2I CCSGG 1 cut(s) 67
AsuHPI GGTGA 5 cut(s) 308, 521, 1151, 1532, 1656
AvaI CYCGRG 1 cut(s) 2247
AvaII GGWCC 6 cut(s) 63, 151, 917, 1727, 1823, 2237
BaeGI GKGCMC 4 cut(s) 670, 781, 822, 1305
BanI GGYRCC 5 cut(s) 571, 628, 667, 778, 2125
BanII GRGCYC 5 cut(s) 714, 798, 1241, 1553, 2359
BbrPI CACGTG 1 cut(s) 314
BbsI GAAGAC 2 cut(s) 1131, 1862
Bbv12I GWGCWC 5 cut(s) 798, 1117, 1241, 1553, 2359
BbvI GCAGC 9 cut(s) 295, 434, 494, 689, 1057, 1093, 1096, 1978, 2353
BceAI ACGGC 1 cut(s) 149
BcgI CGANNNNNNTGC 2 cut(s) 1588, 1622
BciT130I CCWGG 8 cut(s) 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
BciVI GTATCC 1 cut(s) 677
BcnI CCSGG 1 cut(s) 67
BcoDI GTCTC 6 cut(s) 179, 261, 863, 1015, 1262, 2475
BfaI CTAG 7 cut(s) 179, 252, 813, 857, 1314, 1611, 1866
BfmI CTRYAG 7 cut(s) 420, 466, 675, 1143, 1275, 1293, 1992
BfuAI ACCTGC 6 cut(s) 376, 395, 403, 790, 1751, 1834
BfuI GTATCC 1 cut(s) 677
BglII AGATCT 1 cut(s) 120
BlpI GCTNAGC 1 cut(s) 1047
Bme1390I CCNGG 9 cut(s) 67, 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
Bme18I GGWCC 6 cut(s) 63, 151, 917, 1727, 1823, 2237
BmeT110I CYCGRG 1 cut(s) 2247
BmgT120I GGNCC 9 cut(s) 63, 151, 729, 917, 1217, 1386, 1727, 1823, 2237
BmrFI CCNGG 9 cut(s) 67, 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
BmrI ACTGGG 2 cut(s) 1392, 2035
BmsI GCATC 6 cut(s) 751, 977, 1045, 1300, 1351, 2441
BmuI ACTGGG 2 cut(s) 1392, 2035
BpiI GAAGAC 2 cut(s) 1131, 1862
BpmI CTGGAG 5 cut(s) 732, 1161, 1416, 2115, 2373
Bpu10I CCTNAGC 1 cut(s) 1221
Bpu1102I GCTNAGC 1 cut(s) 1047
BpuEI CTTGAG 4 cut(s) 168, 466, 1052, 1213
BpuMI CCSGG 1 cut(s) 67
BsaAI YACGTR 1 cut(s) 314
BsaBI GATNNNNATC 1 cut(s) 1341
BsaI GGTCTC 1 cut(s) 261
BsaJI CCNNGG 6 cut(s) 624, 714, 822, 2290, 2436, 2437
BsaWI WCCGGW 2 cut(s) 932, 2132
Bsc4I CCNNNNNNNGG 6 cut(s) 73, 545, 680, 774, 1457, 1808
Bse118I RCCGGY 1 cut(s) 2132
Bse1I ACTGG 9 cut(s) 43, 439, 476, 550, 1247, 1387, 1389, 1825, 2041
Bse3DI GCAATG 3 cut(s) 28, 1711, 2259
Bse8I GATNNNNATC 1 cut(s) 1341
BseBI CCWGG 8 cut(s) 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
BseDI CCNNGG 6 cut(s) 624, 714, 822, 2290, 2436, 2437
BseGI GGATG 8 cut(s) 461, 527, 742, 1012, 1108, 1243, 2400, 2432
BseJI GATNNNNATC 1 cut(s) 1341
BseLI CCNNNNNNNGG 6 cut(s) 73, 545, 680, 774, 1457, 1808
BseMI GCAATG 3 cut(s) 28, 1711, 2259
BseNI ACTGG 9 cut(s) 43, 439, 476, 550, 1247, 1387, 1389, 1825, 2041
BseSI GKGCMC 4 cut(s) 670, 781, 822, 1305
BseXI GCAGC 9 cut(s) 295, 434, 494, 689, 1057, 1093, 1096, 1978, 2353
BseYI CCCAGC 2 cut(s) 59, 2328
BsgI GTGCAG 3 cut(s) 91, 294, 1473
Bsh1236I CGCG 2 cut(s) 261, 1817
BshFI GGCC 4 cut(s) 616, 730, 1218, 1388
BshNI GGYRCC 5 cut(s) 571, 628, 667, 778, 2125
BshTI ACCGGT 1 cut(s) 2132
BsiHKAI GWGCWC 5 cut(s) 798, 1117, 1241, 1553, 2359
BsiHKCI CYCGRG 1 cut(s) 2247
BsiSI CCGG 5 cut(s) 67, 933, 1215, 2133, 2320
BslFI GGGAC 6 cut(s) 49, 1713, 1893, 2383, 2441, 2466
BslI CCNNNNNNNGG 6 cut(s) 73, 545, 680, 774, 1457, 1808
BsmAI GTCTC 6 cut(s) 179, 261, 863, 1015, 1262, 2475
BsmBI CGTCTC 2 cut(s) 179, 863
BsmFI GGGAC 6 cut(s) 49, 1713, 1893, 2383, 2441, 2466
BsmI GAATGC 2 cut(s) 1467, 1943
BsnI GGCC 4 cut(s) 616, 730, 1218, 1388
Bso31I GGTCTC 1 cut(s) 261
BsoBI CYCGRG 1 cut(s) 2247
Bsp143I GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
Bsp1720I GCTNAGC 1 cut(s) 1047
Bsp68I TCGCGA 1 cut(s) 1817
BspACI CCGC 7 cut(s) 6, 15, 18, 261, 318, 617, 1725
BspANI GGCC 4 cut(s) 616, 730, 1218, 1388
BspFNI CGCG 2 cut(s) 261, 1817
BspHI TCATGA 1 cut(s) 655
BspMAI CTGCAG 4 cut(s) 424, 679, 1297, 1996
BspMI ACCTGC 6 cut(s) 376, 395, 403, 790, 1751, 1834
BspPI GGATC 5 cut(s) 182, 328, 467, 1206, 1659
BspQI GCTCTTC 2 cut(s) 200, 1836
BspT107I GGYRCC 5 cut(s) 571, 628, 667, 778, 2125
BspTNI GGTCTC 1 cut(s) 261
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 3 cut(s) 28, 1711, 2259
BsrFI RCCGGY 1 cut(s) 2132
BsrI ACTGG 9 cut(s) 43, 439, 476, 550, 1247, 1387, 1389, 1825, 2041
BssAI RCCGGY 1 cut(s) 2132
BssECI CCNNGG 6 cut(s) 624, 714, 822, 2290, 2436, 2437
BssMI GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
BssT1I CCWWGG 3 cut(s) 624, 714, 822
Bst2UI CCWGG 8 cut(s) 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
Bst4CI ACNGT 6 cut(s) 143, 470, 2007, 2121, 2183, 2337
Bst6I CTCTTC 5 cut(s) 200, 421, 1260, 1777, 1836
BstAPI GCANNNNNTGC 2 cut(s) 674, 2258
BstBAI YACGTR 1 cut(s) 314
BstC8I GCNNGC 9 cut(s) 427, 621, 818, 1187, 1953, 1989, 2259, 2272, 2310
BstENI CCTNNNNNAGG 1 cut(s) 678
BstF5I GGATG 8 cut(s) 461, 527, 742, 1012, 1108, 1243, 2400, 2432
BstFNI CGCG 2 cut(s) 261, 1817
BstKTI GATC 9 cut(s) 123, 190, 301, 323, 475, 1214, 1231, 1654, 2407
BstMAI GTCTC 6 cut(s) 179, 261, 863, 1015, 1262, 2475
BstMBI GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
BstNI CCWGG 8 cut(s) 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
BstNSI RCATGY 3 cut(s) 763, 2227, 2312
BstSCI CCNGG 9 cut(s) 65, 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
BstSFI CTRYAG 7 cut(s) 420, 466, 675, 1143, 1275, 1293, 1992
BstSLI GKGCMC 4 cut(s) 670, 781, 822, 1305
BstUI CGCG 2 cut(s) 261, 1817
BstV1I GCAGC 9 cut(s) 295, 434, 494, 689, 1057, 1093, 1096, 1978, 2353
BstV2I GAAGAC 2 cut(s) 1131, 1862
BstX2I RGATCY 3 cut(s) 120, 187, 1651
BstYI RGATCY 3 cut(s) 120, 187, 1651
BsuI GTATCC 1 cut(s) 677
BsuRI GGCC 4 cut(s) 616, 730, 1218, 1388
BtgZI GCGATG 1 cut(s) 684
BtsCI GGATG 8 cut(s) 461, 527, 742, 1012, 1108, 1243, 2400, 2432
BtsIMutI CAGTG 9 cut(s) 108, 475, 483, 543, 896, 1071, 1254, 1396, 1422
BtuMI TCGCGA 1 cut(s) 1817
BveI ACCTGC 6 cut(s) 376, 395, 403, 790, 1751, 1834
Cac8I GCNNGC 9 cut(s) 427, 621, 818, 1187, 1953, 1989, 2259, 2272, 2310
CaiI CAGNNNCTG 2 cut(s) 1070, 1987
CciI TCATGA 1 cut(s) 655
Cfr10I RCCGGY 1 cut(s) 2132
Cfr13I GGNCC 9 cut(s) 63, 151, 729, 917, 1217, 1386, 1727, 1823, 2237
CseI GACGC 1 cut(s) 2438
CsiI ACCWGGT 2 cut(s) 1801, 2239
Csp6I GTAC 4 cut(s) 373, 1559, 2136, 2173
CspAI ACCGGT 1 cut(s) 2132
CviQI GTAC 4 cut(s) 373, 1559, 2136, 2173
DpnI GATC 9 cut(s) 122, 189, 300, 322, 474, 1213, 1230, 1653, 2406
DpnII GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
DrdI GACNNNNNNGTC 1 cut(s) 2395
DseDI GACNNNNNNGTC 1 cut(s) 2395
Eam1104I CTCTTC 5 cut(s) 200, 421, 1260, 1777, 1836
EarI CTCTTC 5 cut(s) 200, 421, 1260, 1777, 1836
EciI GGCGGA 1 cut(s) 333
Ecl136II GAGCTC 4 cut(s) 796, 1239, 1551, 2357
Eco130I CCWWGG 3 cut(s) 624, 714, 822
Eco24I GRGCYC 5 cut(s) 714, 798, 1241, 1553, 2359
Eco31I GGTCTC 1 cut(s) 261
Eco32I GATATC 2 cut(s) 551, 1000
Eco47I GGWCC 6 cut(s) 63, 151, 917, 1727, 1823, 2237
Eco53kI GAGCTC 4 cut(s) 796, 1239, 1551, 2357
Eco57I CTGAAG 4 cut(s) 1143, 1398, 1473, 2186
Eco72I CACGTG 1 cut(s) 314
Eco88I CYCGRG 1 cut(s) 2247
EcoICRI GAGCTC 4 cut(s) 796, 1239, 1551, 2357
EcoNI CCTNNNNNAGG 1 cut(s) 678
EcoO109I RGGNCCY 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 1600
EcoRII CCWGG 8 cut(s) 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
EcoRV GATATC 2 cut(s) 551, 1000
EcoT14I CCWWGG 3 cut(s) 624, 714, 822
EcoT38I GRGCYC 5 cut(s) 714, 798, 1241, 1553, 2359
ErhI CCWWGG 3 cut(s) 624, 714, 822
Esp3I CGTCTC 2 cut(s) 179, 863
FaqI GGGAC 6 cut(s) 49, 1713, 1893, 2383, 2441, 2466
FauNDI CATATG 1 cut(s) 1504
FblI GTMKAC 1 cut(s) 364
FokI GGATG 8 cut(s) 448, 514, 729, 999, 1115, 1230, 2407, 2419
FriOI GRGCYC 5 cut(s) 714, 798, 1241, 1553, 2359
FspBI CTAG 7 cut(s) 179, 252, 813, 857, 1314, 1611, 1866
GsaI CCCAGC 2 cut(s) 63, 2332
GsuI CTGGAG 5 cut(s) 732, 1161, 1416, 2115, 2373
HaeIII GGCC 4 cut(s) 616, 730, 1218, 1388
HapII CCGG 5 cut(s) 67, 933, 1215, 2133, 2320
HgaI GACGC 1 cut(s) 2438
HindIII AAGCTT 1 cut(s) 1953
HinfI GANTC 6 cut(s) 248, 344, 659, 1406, 2113, 2299
HpaII CCGG 5 cut(s) 67, 933, 1215, 2133, 2320
HphI GGTGA 5 cut(s) 308, 521, 1151, 1532, 1656
Hpy166II GTNNAC 2 cut(s) 365, 2233
Hpy188I TCNGA 9 cut(s) 81, 793, 1211, 1309, 1360, 1638, 1920, 2112, 2388
Hpy188III TCNNGA 8 cut(s) 48, 185, 656, 1016, 1178, 1322, 1816, 2247
Hpy8I GTNNAC 2 cut(s) 365, 2233
Hpy99I CGWCG 3 cut(s) 456, 2125, 2341
HpyAV CCTTC 8 cut(s) 22, 549, 601, 1093, 1422, 1494, 1722, 2469
HpyCH4III ACNGT 6 cut(s) 143, 470, 2007, 2121, 2183, 2337
HpyCH4IV ACGT 1 cut(s) 313
HpySE526I ACGT 1 cut(s) 313
KflI GGGWCCC 1 cut(s) 63
Kzo9I GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
LguI GCTCTTC 2 cut(s) 200, 1836
LmnI GCTCC 6 cut(s) 238, 1112, 1244, 1517, 1576, 2354
Lsp1109I GCAGC 9 cut(s) 295, 434, 494, 689, 1057, 1093, 1096, 1978, 2353
LweI GCATC 6 cut(s) 751, 977, 1045, 1300, 1351, 2441
MabI ACCWGGT 2 cut(s) 1801, 2239
MaeI CTAG 7 cut(s) 179, 252, 813, 857, 1314, 1611, 1866
MaeII ACGT 1 cut(s) 313
MaeIII GTNAC 8 cut(s) 143, 1256, 1419, 1675, 1964, 2084, 2183, 2196
MalI GATC 9 cut(s) 122, 189, 300, 322, 474, 1213, 1230, 1653, 2406
MbiI CCGCTC 1 cut(s) 6
MboI GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
MfeI CAATTG 2 cut(s) 1520, 2142
MflI RGATCY 3 cut(s) 120, 187, 1651
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 1 cut(s) 1914
MroXI GAANNNNTTC 1 cut(s) 523
MseI TTAA 4 cut(s) 135, 168, 603, 1436
MslI CAYNNNNRTG 3 cut(s) 1308, 1739, 1931
MspA1I CMGCKG 5 cut(s) 59, 425, 485, 1725, 1843
MspI CCGG 5 cut(s) 67, 933, 1215, 2133, 2320
MspR9I CCNGG 9 cut(s) 67, 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
MunI CAATTG 2 cut(s) 1520, 2142
Mva1269I GAATGC 2 cut(s) 1467, 1943
MvaI CCWGG 8 cut(s) 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
MvnI CGCG 2 cut(s) 261, 1817
NciI CCSGG 1 cut(s) 67
NdeI CATATG 1 cut(s) 1504
NdeII GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
NmeAIII GCCGAG 1 cut(s) 938
NmuCI GTSAC 4 cut(s) 1256, 1419, 1675, 2196
NruI TCGCGA 1 cut(s) 1817
NspI RCATGY 3 cut(s) 763, 2227, 2312
PaeI GCATGC 1 cut(s) 2312
PagI TCATGA 1 cut(s) 655
PaqCI CACCTGC 3 cut(s) 403, 790, 1751
PasI CCCWGGG 1 cut(s) 2437
PciSI GCTCTTC 2 cut(s) 200, 1836
PctI GAATGC 2 cut(s) 1467, 1943
PdmI GAANNNNTTC 1 cut(s) 523
PfeI GAWTC 5 cut(s) 248, 659, 1406, 2113, 2299
PfoI TCCNGGA 2 cut(s) 65, 2092
PinAI ACCGGT 1 cut(s) 2132
PleI GAGTC 1 cut(s) 352
PmaCI CACGTG 1 cut(s) 314
PmlI CACGTG 1 cut(s) 314
PpsI GAGTC 1 cut(s) 352
Ppu21I YACGTR 1 cut(s) 314
PpuMI RGGWCCY 1 cut(s) 63
PsiI TTATAA 1 cut(s) 2162
Psp124BI GAGCTC 4 cut(s) 798, 1241, 1553, 2359
Psp5II RGGWCCY 1 cut(s) 63
Psp6I CCWGG 8 cut(s) 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
PspCI CACGTG 1 cut(s) 314
PspFI CCCAGC 2 cut(s) 59, 2328
PspGI CCWGG 8 cut(s) 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
PspPI GGNCC 9 cut(s) 63, 151, 729, 917, 1217, 1386, 1727, 1823, 2237
PspPPI RGGWCCY 1 cut(s) 63
PstI CTGCAG 4 cut(s) 424, 679, 1297, 1996
PstNI CAGNNNCTG 2 cut(s) 1070, 1987
PsuI RGATCY 3 cut(s) 120, 187, 1651
PvuII CAGCTG 4 cut(s) 59, 425, 485, 1843
RruI TCGCGA 1 cut(s) 1817
RsaI GTAC 4 cut(s) 374, 1560, 2137, 2174
RsaNI GTAC 4 cut(s) 373, 1559, 2136, 2173
RseI CAYNNNNRTG 3 cut(s) 1308, 1739, 1931
SacI GAGCTC 4 cut(s) 798, 1241, 1553, 2359
SapI GCTCTTC 2 cut(s) 200, 1836
SaqAI TTAA 4 cut(s) 135, 168, 603, 1436
Sau3AI GATC 9 cut(s) 120, 187, 298, 320, 472, 1211, 1228, 1651, 2404
Sau96I GGNCC 9 cut(s) 63, 151, 729, 917, 1217, 1386, 1727, 1823, 2237
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 9 cut(s) 67, 576, 750, 1494, 1803, 2094, 2241, 2291, 2438
SexAI ACCWGGT 2 cut(s) 1801, 2239
SfaNI GCATC 6 cut(s) 751, 977, 1045, 1300, 1351, 2441
SfcI CTRYAG 7 cut(s) 420, 466, 675, 1143, 1275, 1293, 1992
SinI GGWCC 6 cut(s) 63, 151, 917, 1727, 1823, 2237
SmiMI CAYNNNNRTG 3 cut(s) 1308, 1739, 1931
SmlI CTYRAG 4 cut(s) 183, 445, 1031, 1192
SmoI CTYRAG 4 cut(s) 183, 445, 1031, 1192
SphI GCATGC 1 cut(s) 2312
SsiI CCGC 7 cut(s) 6, 15, 18, 261, 318, 617, 1725
SspI AATATT 2 cut(s) 271, 2053
SspMI CTAG 7 cut(s) 179, 252, 813, 857, 1314, 1611, 1866
SstI GAGCTC 4 cut(s) 798, 1241, 1553, 2359
StyD4I CCNGG 9 cut(s) 65, 574, 748, 1492, 1801, 2092, 2239, 2289, 2436
StyI CCWWGG 3 cut(s) 624, 714, 822
TaaI ACNGT 6 cut(s) 143, 470, 2007, 2121, 2183, 2337
TaiI ACGT 1 cut(s) 316
TaqI TCGA 3 cut(s) 891, 1235, 2403
TatI WGTACW 2 cut(s) 1558, 2172
TauI GCSGC 3 cut(s) 18, 21, 619
TfiI GAWTC 5 cut(s) 248, 659, 1406, 2113, 2299
Tru1I TTAA 4 cut(s) 135, 168, 603, 1436
Tru9I TTAA 4 cut(s) 135, 168, 603, 1436
TscAI CASTG 9 cut(s) 115, 475, 483, 550, 903, 1071, 1254, 1396, 1422
TseFI GTSAC 4 cut(s) 1256, 1419, 1675, 2196
TseI GCWGC 9 cut(s) 308, 422, 482, 677, 1070, 1081, 1084, 1991, 2341
Tsp45I GTSAC 4 cut(s) 1256, 1419, 1675, 2196
TspDTI ATGAA 9 cut(s) 174, 213, 516, 687, 798, 1050, 1056, 1160, 1364
TspGWI ACGGA 3 cut(s) 260, 887, 2250
TspRI CASTG 9 cut(s) 115, 475, 483, 550, 903, 1071, 1254, 1396, 1422
VpaK11BI GGWCC 6 cut(s) 63, 151, 917, 1727, 1823, 2237
XagI CCTNNNNNAGG 1 cut(s) 678
XapI RAATTY 3 cut(s) 694, 787, 1600
XceI RCATGY 3 cut(s) 763, 2227, 2312
XmiI GTMKAC 1 cut(s) 364
XmnI GAANNNNTTC 1 cut(s) 523
XspI CTAG 7 cut(s) 179, 252, 813, 857, 1314, 1611, 1866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.