Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003839

Physical Location & Seq

Genomic Coordinates Reverse (-)

13841470 .. 13846952

Gene Structure 5483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0149100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3684 bp

ATGGAGTCAGATGAGGAGCACAGGACTGTTCAAGGAATGTCTCCCGAGTATGGTGCAATTTTCATGTCAAGCAGTTTTACAAAAGATGAATGTTTTAGACGAAGACTGTTTGGCCTTCCATCTGGACAAGGCCCATTTGTAAAGCAGATCAAAAGTGGAATGATTTTATTTCTCTTTGAATTTGAGAAGAGAGAACTCCATGGTGTATTCCAGGCATCCTCTGATGGTAGAATGAATATTGTTTCTAATGCATGGAGTAGATCAGGAAAGAAGTTTCCTGCTCAGGTGAGAGTCAACCCAATTTGGCATTGTCATCCACTTCCAGAATCTGAGTTTGGTGACGCTATCAAAGAAAACTATTTTTCAAAATGGAAATTCAATTTTGGTCTTTCCAAAGCTCAGGTTTGGAGGCTTCTAATGTTGTTTAATTTGCGAAAATTGAAAAGTCCACATCCTCAGAGAGCACTAGCTAGAAATACTGCTGCACAACCGGTGGACATTTATCGAGAACTTGATGATGGCAGATTATCAAGTGATAAAGTGGGTAATCTACATAAAGTGGACAATACGCTTCGGTCGATCATCCAGAGCAGGTATCTTGAACACCTGCCAGGCAAAGTTGAAAGAGATGATGCTAAGTTTGGGAATGGAGTTAATGTGGATTTTGAACACAGGGCATTGTCATCAACTGAGCATACTAGGTCAGGCCAAAATGGAAGATGTGATGGCAGCCTGGCAATGTGTGGAAGGGAAGGAAGTGTCAGTCACTTGGATGGTCCTTTTTATTCTGGAATGCCTCTTCAAGAAACATATTCTTTGGTTCAAGATAAAAAAACTTCTAGCCATCAGATGGAGCTGCCAATCACTGGCCACTCTTATGCAGCATCTCGTGGAGATGCAATTATTACGAGCATTCTTCCCTATGATCCTGATGATCCTAGTTTGAACCTTGCACATTCTCGATTAGTTGGAAATTATGATTCTGTTCAAGACTGTGATGGCCAGAATGGCATTCCTGCGGTGAGGAATGAAGTAAATCCCTCGTACACAGAGACAAATGGACTAAATCAAAGCCTAGAAGACATTTCTAAGGTTGATGTTCGCAGATCACTTTCAGCCATCAATATTACTCCTTTTCCAGGGGCAACATCTTCAGCAGAAATGGCTATTTACTATTCAAAGTCCTCTTTAGCTCCTGAATCTTTATCAGAATTTGGAAGTAATGGGAGGGACGGGCCTTCCTCTTATCCCCTTAGCCCCAGTAATTATCCTTCCTTTCTGGTTGAACGGAGGCATCCTGTAGCAATACAAAATAAACCAGTGCATGAAATAGGACCATTTACTGCAAATGTAACTTCATTAGAGGAGATACAGTGCCAGTCACCATGCCGCACTCATTCTGCTGACCTTGAGAGTGTGGACTACCACGACTGTAAATGTTCTGATAGAATGCTGTGTTCAGATCTTCTGGAAAACAGAAGTAGTGTGTTCTCTCGCCTGAGATTCAATAACCCTGGATGGTGTCTGGAAAACCTTGGACATCTTGGCCACGAGGAAGATGTTAAAGACACGTCATCAGTGGATGAAGTCATGGAAATGTTGAGCGAGAGTCACTACCCCTGGATGGAAAGTGAAAAATCTAAACTGCATAAGAGACGACAAGGTAATGCAGAGAAGTCTAGGAATTTGAAGCAGACTGCTGTGAAGTCTGAGTTGGAAATGATTCCAGAGAAGGCAAACACAGCTTCTGCTTCACCAACTGGAGATAAAGATGATCAAAGCAGTAAAAAGACACTGTTTGTGGACTTCAAGCGGCGGAGTGATTTGCGAAAAGTCGATAGCAATACTAATGGGGAAAGTGCTGGAAGCGAGGGATTGTTAGGTGGGCAGTGCAAGAGAAGGAAGTTAATCAGGCCTAACTTCAGTGAGAATGAGCCACGTGATAACAAAAGCTATAATAGAAGTCATTTTATGAATTCACCAGGATCAGCCCAAGAATGTCGTAGTTGTGAAGATGCTGGTGGCAAGAAAAGGAAGCTGGCTAAGCCAAATTTCAGAGAGAACAAGTCATCTCAGGAATCATCTGCGCAATGTTCTATTGGTGAAGATGCTGGTGGCAAGAGAAGGAAGCTGGCTAGGCCAAATTTCGGAGAAAATGAGTCATCTTTAATATCCTCGCCACAATGTTCTGTTGGTGAAGCTGCTGGTGGAAGTTGCGGGTCTTTTGTTGGAAGCCAAGGTAAGTCGTTATTACAAGATGCAGAATCTTCACACGACAATGAGAAGATCGATACTGAATGTGTTTCTAAATATGAACGAGAAATTATAGTAGAAAGTTCTGGGGGTTCTCCCAAAATTGGAGATGATAGTGGAAAGGGGTGTTTGCATGCCTATCCTGGAAATTCTTGTCTGAACTTACAAGCATCAGTCGATGAATCTTCTTTTTGTGAAGATGCTAATTGTAAGAAGAAGTTAGTTGGGCCAGACTTCAGAGAGAATGAGCTATTCCAAGTGTCGCCACATGAATGTTCTAGTGGTGAATATGCTGGTGAAAATTATGAGGTATTGGTTGGAAGCCACGGTAACATTGATGCTCAAAGATGTCCAACATTCAAGATGGAAACTAAACTAGAAAGCTCTGGGGAGTCTCTCAAAATTGGAGATGAAAGTGGAAAGGATCCTGTGCATGATGTTGGCAGCCAAATTGCCATCGTCCCTTCCAAAGATGATATTCTTAATGCACAGGAAGACTTGGATCACAAGGACCCTATGGTGTTGTCTCGAGATGGTCATCAGCCCAGTCAGTCCACCGTGCTAGAGTCAGCTTCTCAACTCAAGACAAATGGATTTTCTGAATTTGAAAGTGACAGAGGCAGTGAACTGGAGATGCTTACAAGGGTTGAATTTTCTCCAAACATAGCTGGCAATGGTGGCTCCAGGAAGCAGAACTCTGACTCACCAAGAGTATCTGAAAACATCTCTAATCGCGTGGATGCGGGTATGATAAATTATCAACACGGATCCAGTACTGAGCAGGGTCAGGCATCTTGCAACTCCAACCAGCATGATTCACTTAAACAGGAAGGGTTCGGGAATGACGTGCTGGAGGCTGTGGAGTTTGGTGATAATGTTGCTAGTGATTACACTTCAAGAGAAAGAGAAATAGACATTAAACTAGAAAGCTTTGTGGATTCTGTCAAAAGTGGAGATGAAAATGGAATGGAGAGCGTGCAGGTTGGTATTCTTAGTGCACTGGAAGACTCTATACTTACCAGGTTGTCTGAAGACTTTCCCGAGACCGATCAGATAACTGTGCTAGAGTCAGCTACGCAACCTAAGACGAATTCTGGAACAAGTAATGGATTTTCTGAAATCGAAGCTGACAGAGGCAGTGAACTGCAGGTGCTTCCAATAGTTGAACGTTGTCCAAACACAAACGCTTCCAATCGTGCAGATGCAAGTATGGTAAATAACCAACAAGGAGTCAATTCTGAGCAGTTGCAGACGTCTTGCAACTCCAACAATCACAGATCACATCAAGAGCATGGATCCAAACATAATGTGCAAGAGAGCATGGAGTTCGGCGATAATGAGGCAATTGATGACACTGTAAGAGAAAACAAGAGGCAATGGAGTATTTTAACAGCTAGATTGCAGCTTGTTAAGAGGGCACAACAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

1227

Amino Acids

135.45

Weight (kDa)

5.37

Isoelectric Point (pI)

53.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dev_Cell_Death	PF10539	18 - 142	5e-48	Development and cell death domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15520 AT3G15520 AT3G15520 AT3G15520
fragaria_vesca	FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740 FvH4_3g20740
malus_domestica	MD03G1222300.v1.1
prunus_persica	Prupe.4G187400_v2.0.a1 Prupe.4G187400_v2.0.a1 Prupe.4G187400_v2.0.a1 Prupe.4G187400_v2.0.a1 Prupe.4G187400_v2.0.a1
pyrus_communis	pycom03g17090
rosa_chinensis	RchiOBHm_Chr5g0034911 RchiOBHm_Chr5g0034961
rosa_laevigata	RLG00000033585 RLG00000033588
rosa_multiflora	Rmu_co8461127.1_g000001 Rmu_sc0001580.1_g000024
rosa_roxburghii	Rroxscaffold_1G00045420
rosa_rugosa	Rorug05G0149100 Rorug05G0149100
rosa_samantha	Rh5AG242100 Rh5BG241700 Rh5CG273200 Rh5DG250300
rosa_wichuraiana	Rw5G022110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	615, 3391
AatII	GACGTC	1 cut(s)	3509
Acc16I	TGCGCA	1 cut(s)	2088
Acc36I	ACCTGC	4 cut(s)	582, 615, 3223, 3391
AccB7I	CCANNNNNTGG	2 cut(s)	850, 866
AccII	CGCG	1 cut(s)	2988
AciI	CCGC	6 cut(s)	1019, 1390, 1813, 1816, 2217, 2996
AclI	AACGTT	1 cut(s)	3421
AcoI	YGGCCR	3 cut(s)	868, 1000, 1546
AcuI	CTGAAG	4 cut(s)	1137, 1906, 2473, 3303
AcvI	CACGTG	1 cut(s)	1940
AcyI	GRCGYC	1 cut(s)	3506
AfaI	GTAC	2 cut(s)	1046, 3028
AfiI	CCNNNNNNNGG	7 cut(s)	50, 850, 866, 1139, 1624, 2147, 2357
AflIII	ACRYGT	1 cut(s)	1569
AgeI	ACCGGT	1 cut(s)	490
AjiI	CACGTC	2 cut(s)	1572, 3100
AjuI	GAANNNNNNNTTGG	4 cut(s)	318, 350, 1697, 1729
Alw21I	GWGCWC	3 cut(s)	21, 466, 3253
Alw26I	GTCTC	6 cut(s)	45, 1046, 1648, 2652, 2784, 3290
Alw44I	GTGCAC	1 cut(s)	3249
AlwNI	CAGNNNCTG	2 cut(s)	329, 1748
Ama87I	CYCGRG	3 cut(s)	44, 2781, 3293
ApaLI	GTGCAC	1 cut(s)	3249
ApeKI	GCWGC	7 cut(s)	482, 729, 856, 881, 2201, 2697, 3655
AsiGI	ACCGGT	1 cut(s)	490
Asp700I	GAANNNNTTC	2 cut(s)	1722, 3288
AspLEI	GCGC	1 cut(s)	2089
AspS9I	GGNCC	6 cut(s)	131, 776, 1235, 1334, 2480, 2764
AvaI	CYCGRG	3 cut(s)	44, 2781, 3293
AvaII	GGWCC	3 cut(s)	776, 1334, 2764
BaeGI	GKGCMC	2 cut(s)	3253, 3673
BalI	TGGCCA	3 cut(s)	870, 1002, 1548
BamHI	GGATCC	3 cut(s)	2677, 3020, 3548
BarI	GAAGNNNNNNTAC	4 cut(s)	1255, 1287, 3249, 3281
BauI	CACGAG	2 cut(s)	888, 1550
BbrPI	CACGTG	1 cut(s)	1940
BbsI	GAAGAC	5 cut(s)	109, 1086, 2754, 3264, 3291
Bbv12I	GWGCWC	3 cut(s)	21, 466, 3253
BbvI	GCAGC	7 cut(s)	469, 741, 843, 893, 2188, 2709, 3667
BcgI	CGANNNNNNTGC	4 cut(s)	35, 69, 3562, 3596
BclI	TGATCA	1 cut(s)	1774
BcoDI	GTCTC	6 cut(s)	45, 1046, 1648, 2652, 2784, 3290
BfmI	CTRYAG	2 cut(s)	1299, 3398
BfuAI	ACCTGC	4 cut(s)	582, 615, 3223, 3391
BglI	GCCNNNNNGGC	1 cut(s)	1008
BglII	AGATCT	1 cut(s)	1462
BisI	GCNGC	9 cut(s)	483, 730, 857, 882, 1390, 1814, 2202, 2698, 3656
BlpI	GCTNAGC	1 cut(s)	2043
BlsI	GCNGC	9 cut(s)	484, 731, 858, 883, 1391, 1815, 2203, 2699, 3657
BmcAI	AGTACT	1 cut(s)	3028
Bme18I	GGWCC	3 cut(s)	776, 1334, 2764
BmeT110I	CYCGRG	3 cut(s)	44, 2781, 3293
BmgBI	CACGTC	2 cut(s)	1572, 3100
BmgT120I	GGNCC	6 cut(s)	131, 776, 1235, 1334, 2480, 2764
BmiI	GGNNCC	5 cut(s)	2679, 2766, 2935, 3022, 3550
BmrI	ACTGGG	2 cut(s)	1254, 2793
BmuI	ACTGGG	2 cut(s)	1254, 2793
BpiI	GAAGAC	5 cut(s)	109, 1086, 2754, 3264, 3291
BpmI	CTGGAG	4 cut(s)	1782, 2903, 2920, 3125
Bpu10I	CCTNAGC	3 cut(s)	282, 399, 1253
Bpu1102I	GCTNAGC	1 cut(s)	2043
BpuEI	CTTGAG	2 cut(s)	1430, 2819
Bsa29I	ATCGAT	1 cut(s)	2289
BsaAI	YACGTR	1 cut(s)	1940
BsaBI	GATNNNNATC	1 cut(s)	2790
BsaHI	GRCGYC	1 cut(s)	3506
BsaI	GGTCTC	1 cut(s)	3290
BsaJI	CCNNGG	7 cut(s)	199, 1139, 1513, 1534, 1619, 2236, 2578
BsaWI	WCCGGW	1 cut(s)	490
BsaXI	ACNNNNNCTCC	4 cut(s)	642, 672, 1358, 1388
Bsc4I	CCNNNNNNNGG	7 cut(s)	50, 850, 866, 1139, 1624, 2147, 2357
Bse118I	RCCGGY	1 cut(s)	490
Bse1I	ACTGG	9 cut(s)	871, 1260, 1319, 1378, 1765, 2799, 2886, 3024, 3258
Bse3DI	GCAATG	4 cut(s)	744, 2096, 2932, 3635
Bse8I	GATNNNNATC	1 cut(s)	2790
BseCI	ATCGAT	1 cut(s)	2289
BseDI	CCNNGG	7 cut(s)	199, 1139, 1513, 1534, 1619, 2236, 2578
BseJI	GATNNNNATC	1 cut(s)	2790
BseLI	CCNNNNNNNGG	7 cut(s)	50, 850, 866, 1139, 1624, 2147, 2357
BseMI	GCAATG	4 cut(s)	744, 2096, 2932, 3635
BseNI	ACTGG	9 cut(s)	871, 1260, 1319, 1378, 1765, 2799, 2886, 3024, 3258
BseRI	GAGGAG	2 cut(s)	29, 1379
BseSI	GKGCMC	2 cut(s)	3253, 3673
BseXI	GCAGC	7 cut(s)	469, 741, 843, 893, 2188, 2709, 3667
BsgI	GTGCAG	3 cut(s)	468, 3251, 3471
Bsh1236I	CGCG	1 cut(s)	2988
Bsh1285I	CGRYCG	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	490
BshVI	ATCGAT	1 cut(s)	2289
BsiEI	CGRYCG	1 cut(s)	578
BsiHKAI	GWGCWC	3 cut(s)	21, 466, 3253
BsiHKCI	CYCGRG	3 cut(s)	44, 2781, 3293
BsiSI	CCGG	1 cut(s)	491
BslFI	GGGAC	2 cut(s)	1244, 2699
BslI	CCNNNNNNNGG	7 cut(s)	50, 850, 866, 1139, 1624, 2147, 2357
BsmAI	GTCTC	6 cut(s)	45, 1046, 1648, 2652, 2784, 3290
BsmBI	CGTCTC	1 cut(s)	1648
BsmFI	GGGAC	2 cut(s)	1244, 2699
BsmI	GAATGC	4 cut(s)	798, 912, 1011, 1455
Bso31I	GGTCTC	1 cut(s)	3290
BsoBI	CYCGRG	3 cut(s)	44, 2781, 3293
Bsp1286I	GDGCHC	4 cut(s)	21, 466, 3253, 3673
Bsp1720I	GCTNAGC	1 cut(s)	2043
Bsp19I	CCATGG	1 cut(s)	199
BspACI	CCGC	6 cut(s)	1019, 1390, 1813, 1816, 2217, 2996
BspDI	ATCGAT	1 cut(s)	2289
BspFNI	CGCG	1 cut(s)	2988
BspLI	GGNNCC	5 cut(s)	2679, 2766, 2935, 3022, 3550
BspMAI	CTGCAG	1 cut(s)	3402
BspMI	ACCTGC	4 cut(s)	582, 615, 3223, 3391
BspTNI	GGTCTC	1 cut(s)	3290
BsrDI	GCAATG	4 cut(s)	744, 2096, 2932, 3635
BsrFI	RCCGGY	1 cut(s)	490
BsrI	ACTGG	9 cut(s)	871, 1260, 1319, 1378, 1765, 2799, 2886, 3024, 3258
BssAI	RCCGGY	1 cut(s)	490
BssECI	CCNNGG	7 cut(s)	199, 1139, 1513, 1534, 1619, 2236, 2578
BssNI	GRCGYC	1 cut(s)	3506
BssSI	CACGAG	2 cut(s)	888, 1550
BssT1I	CCWWGG	3 cut(s)	199, 1534, 2236
Bst2BI	CACGAG	2 cut(s)	888, 1550
Bst6I	CTCTTC	2 cut(s)	182, 804
BstACI	GRCGYC	1 cut(s)	3506
BstBAI	YACGTR	1 cut(s)	1940
BstC8I	GCNNGC	5 cut(s)	2040, 2133, 2388, 2923, 3230
BstDSI	CCRYGG	2 cut(s)	199, 2578
BstENI	CCTNNNNNAGG	1 cut(s)	1137
BstFNI	CGCG	1 cut(s)	2988
BstHHI	GCGC	1 cut(s)	2089
BstMAI	GTCTC	6 cut(s)	45, 1046, 1648, 2652, 2784, 3290
BstMCI	CGRYCG	1 cut(s)	578
BstMWI	GCNNNNNNNGC	6 cut(s)	1008, 1163, 1742, 2044, 2137, 2931
BstNSI	RCATGY	1 cut(s)	2390
BstSFI	CTRYAG	2 cut(s)	1299, 3398
BstSLI	GKGCMC	2 cut(s)	3253, 3673
BstUI	CGCG	1 cut(s)	2988
BstV1I	GCAGC	7 cut(s)	469, 741, 843, 893, 2188, 2709, 3667
BstV2I	GAAGAC	5 cut(s)	109, 1086, 2754, 3264, 3291
BstX2I	RGATCY	4 cut(s)	1462, 2677, 3020, 3548
BstYI	RGATCY	4 cut(s)	1462, 2677, 3020, 3548
Bsu15I	ATCGAT	1 cut(s)	2289
BsuTUI	ATCGAT	1 cut(s)	2289
BtgI	CCRYGG	2 cut(s)	199, 2578
BtrI	CACGTC	2 cut(s)	1572, 3100
BtsI	GCAGTG	3 cut(s)	1895, 2881, 3397
BveI	ACCTGC	4 cut(s)	582, 615, 3223, 3391
Cac8I	GCNNGC	5 cut(s)	2040, 2133, 2388, 2923, 3230
CaiI	CAGNNNCTG	2 cut(s)	329, 1748
CfoI	GCGC	1 cut(s)	2089
Cfr10I	RCCGGY	1 cut(s)	490
Cfr13I	GGNCC	6 cut(s)	131, 776, 1235, 1334, 2480, 2764
ClaI	ATCGAT	1 cut(s)	2289
CseI	GACGC	1 cut(s)	350
CsiI	ACCWGGT	1 cut(s)	3272
Csp6I	GTAC	2 cut(s)	1045, 3027
CspAI	ACCGGT	1 cut(s)	490
CviQI	GTAC	2 cut(s)	1045, 3027
EaeI	YGGCCR	3 cut(s)	868, 1000, 1546
Eam1104I	CTCTTC	2 cut(s)	182, 804
EarI	CTCTTC	2 cut(s)	182, 804
EciI	GGCGGA	1 cut(s)	1831
Eco130I	CCWWGG	3 cut(s)	199, 1534, 2236
Eco147I	AGGCCT	1 cut(s)	1915
Eco31I	GGTCTC	1 cut(s)	3290
Eco47I	GGWCC	3 cut(s)	776, 1334, 2764
Eco57I	CTGAAG	4 cut(s)	1137, 1906, 2473, 3303
Eco72I	CACGTG	1 cut(s)	1940
Eco88I	CYCGRG	3 cut(s)	44, 2781, 3293
EcoNI	CCTNNNNNAGG	1 cut(s)	1137
EcoO109I	RGGNCCY	1 cut(s)	2764
EcoRI	GAATTC	2 cut(s)	1975, 3343
EcoT14I	CCWWGG	3 cut(s)	199, 1534, 2236
EcoT22I	ATGCAT	1 cut(s)	253
ErhI	CCWWGG	3 cut(s)	199, 1534, 2236
Esp3I	CGTCTC	1 cut(s)	1648
FaqI	GGGAC	2 cut(s)	1244, 2699
FauI	CCCGC	2 cut(s)	2210, 2989
FbaI	TGATCA	1 cut(s)	1774
Fnu4HI	GCNGC	9 cut(s)	483, 730, 857, 882, 1390, 1814, 2202, 2698, 3656
Fsp4HI	GCNGC	9 cut(s)	483, 730, 857, 882, 1390, 1814, 2202, 2698, 3656
FspI	TGCGCA	1 cut(s)	2088
GlaI	GCGC	1 cut(s)	2088
GluI	GCNGC	9 cut(s)	483, 730, 857, 882, 1390, 1814, 2202, 2698, 3656
GsuI	CTGGAG	4 cut(s)	1782, 2903, 2920, 3125
HapII	CCGG	1 cut(s)	491
HgaI	GACGC	1 cut(s)	350
HhaI	GCGC	1 cut(s)	2089
Hin1I	GRCGYC	1 cut(s)	3506
Hin6I	GCGC	1 cut(s)	2087
HinP1I	GCGC	1 cut(s)	2087
HincII	GTYRAC	1 cut(s)	295
HindII	GTYRAC	1 cut(s)	295
HindIII	AAGCTT	1 cut(s)	3181
HpaII	CCGG	1 cut(s)	491
HpyCH4IV	ACGT	5 cut(s)	1571, 1939, 3099, 3421, 3506
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1008, 1163, 1742, 2044, 2137, 2931
HpySE526I	ACGT	5 cut(s)	1571, 1939, 3099, 3421, 3506
Hsp92I	GRCGYC	1 cut(s)	3506
HspAI	GCGC	1 cut(s)	2087
Ksp22I	TGATCA	1 cut(s)	1774
LmnI	GCTCC	4 cut(s)	16, 853, 1198, 2939
Lsp1109I	GCAGC	7 cut(s)	469, 741, 843, 893, 2188, 2709, 3667
MabI	ACCWGGT	1 cut(s)	3272
MaeII	ACGT	5 cut(s)	1571, 1939, 3099, 3421, 3506
MaeIII	GTNAC	7 cut(s)	338, 764, 1351, 1380, 1610, 2582, 2864
MfeI	CAATTG	1 cut(s)	3597
MflI	RGATCY	4 cut(s)	1462, 2677, 3020, 3548
MhlI	GDGCHC	4 cut(s)	21, 466, 3253, 3673
MlsI	TGGCCA	3 cut(s)	870, 1002, 1548
MluNI	TGGCCA	3 cut(s)	870, 1002, 1548
MmeI	TCCRAC	7 cut(s)	949, 1695, 2209, 2551, 2630, 3081, 3543
Mox20I	TGGCCA	3 cut(s)	870, 1002, 1548
Mph1103I	ATGCAT	1 cut(s)	253
MroXI	GAANNNNTTC	2 cut(s)	1722, 3288
MscI	TGGCCA	3 cut(s)	870, 1002, 1548
MslI	CAYNNNNRTG	5 cut(s)	771, 876, 1595, 2277, 2524
Msp20I	TGGCCA	3 cut(s)	870, 1002, 1548
MspI	CCGG	1 cut(s)	491
MunI	CAATTG	1 cut(s)	3597
Mva1269I	GAATGC	4 cut(s)	798, 912, 1011, 1455
MvnI	CGCG	1 cut(s)	2988
MwoI	GCNNNNNNNGC	6 cut(s)	1008, 1163, 1742, 2044, 2137, 2931
NcoI	CCATGG	1 cut(s)	199
NlaIV	GGNNCC	5 cut(s)	2679, 2766, 2935, 3022, 3550
NmuCI	GTSAC	5 cut(s)	338, 764, 1380, 1610, 2864
NsbI	TGCGCA	1 cut(s)	2088
NsiI	ATGCAT	1 cut(s)	253
NspI	RCATGY	1 cut(s)	2390
PaeI	GCATGC	1 cut(s)	2390
PaeR7I	CTCGAG	1 cut(s)	2781
PaqCI	CACCTGC	2 cut(s)	615, 3391
PceI	AGGCCT	1 cut(s)	1915
PcsI	WCGNNNNNNNCGW	2 cut(s)	575, 3096
PctI	GAATGC	4 cut(s)	798, 912, 1011, 1455
PdmI	GAANNNNTTC	2 cut(s)	1722, 3288
PflMI	CCANNNNNTGG	2 cut(s)	850, 866
PfoI	TCCNGGA	2 cut(s)	2395, 2936
PinAI	ACCGGT	1 cut(s)	490
PkrI	GCNGC	9 cut(s)	484, 731, 858, 883, 1391, 1815, 2203, 2699, 3657
PmaCI	CACGTG	1 cut(s)	1940
PmlI	CACGTG	1 cut(s)	1940
Ppu21I	YACGTR	1 cut(s)	1940
PpuMI	RGGWCCY	1 cut(s)	2764
Psp1406I	AACGTT	1 cut(s)	3421
Psp5II	RGGWCCY	1 cut(s)	2764
PspCI	CACGTG	1 cut(s)	1940
PspN4I	GGNNCC	5 cut(s)	2679, 2766, 2935, 3022, 3550
PspPI	GGNCC	6 cut(s)	131, 776, 1235, 1334, 2480, 2764
PspPPI	RGGWCCY	1 cut(s)	2764
PstI	CTGCAG	1 cut(s)	3402
PstNI	CAGNNNCTG	2 cut(s)	329, 1748
PsuI	RGATCY	4 cut(s)	1462, 2677, 3020, 3548
RsaI	GTAC	2 cut(s)	1046, 3028
RsaNI	GTAC	2 cut(s)	1045, 3027
RseI	CAYNNNNRTG	5 cut(s)	771, 876, 1595, 2277, 2524
SatI	GCNGC	9 cut(s)	483, 730, 857, 882, 1390, 1814, 2202, 2698, 3656
Sau96I	GGNCC	6 cut(s)	131, 776, 1235, 1334, 2480, 2764
ScaI	AGTACT	1 cut(s)	3028
SduI	GDGCHC	4 cut(s)	21, 466, 3253, 3673
SexAI	ACCWGGT	1 cut(s)	3272
SfcI	CTRYAG	2 cut(s)	1299, 3398
Sfr274I	CTCGAG	1 cut(s)	2781
SinI	GGWCC	3 cut(s)	776, 1334, 2764
SlaI	CTCGAG	1 cut(s)	2781
SmiMI	CAYNNNNRTG	5 cut(s)	771, 876, 1595, 2277, 2524
SmlI	CTYRAG	3 cut(s)	1409, 2781, 2834
SmoI	CTYRAG	3 cut(s)	1409, 2781, 2834
SphI	GCATGC	1 cut(s)	2390
SseBI	AGGCCT	1 cut(s)	1915
SsiI	CCGC	6 cut(s)	1019, 1390, 1813, 1816, 2217, 2996
SspI	AATATT	2 cut(s)	238, 1126
StuI	AGGCCT	1 cut(s)	1915
StyI	CCWWGG	3 cut(s)	199, 1534, 2236
TaiI	ACGT	5 cut(s)	1574, 1942, 3102, 3424, 3509
TaqI	TCGA	8 cut(s)	505, 578, 961, 1836, 2289, 2430, 2782, 3375
TaqII	GACCGA	2 cut(s)	564, 3314
TatI	WGTACW	1 cut(s)	3026
TauI	GCSGC	2 cut(s)	1392, 1816
TseFI	GTSAC	5 cut(s)	338, 764, 1380, 1610, 2864
TseI	GCWGC	7 cut(s)	482, 729, 856, 881, 2201, 2697, 3655
Tsp45I	GTSAC	5 cut(s)	338, 764, 1380, 1610, 2864
TspGWI	ACGGA	2 cut(s)	1303, 3033
Van91I	CCANNNNNTGG	2 cut(s)	850, 866
VneI	GTGCAC	1 cut(s)	3249
VpaK11BI	GGWCC	3 cut(s)	776, 1334, 2764
XagI	CCTNNNNNAGG	1 cut(s)	1137
XceI	RCATGY	1 cut(s)	2390
XhoI	CTCGAG	1 cut(s)	2781
XmnI	GAANNNNTTC	2 cut(s)	1722, 3288
ZraI	GACGTC	1 cut(s)	3507
ZrmI	AGTACT	1 cut(s)	3028
Zsp2I	ATGCAT	1 cut(s)	253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.