Rorug05G0239100

Coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0010292
Physical Location & Seq
Reverse (-)
25328170 .. 25330938
2769 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0239100.1

Sequence Viewer

Length: 2769 bp
ATGACTAAAGAACCTATGACCATTTTCATGAAAAATTTCATTTTCTTCTTTGTTTTTGTCACACGTTCGTTAAACTCTGTTTCGTTCTCCACTTCAGATGCTCAAGTGTATTTTGCTGATCATTGTGCTTCAATTGCTCCTCGCTACTCAACCCCACAAAGATATGCCGGACTTAATTCCTCTGTTCACCGCCTTACCGGTTTCTACTACAGTGCTGGTGAAACTAACATTCTTAGTCAGAACTCAATTGTATTCCGCTTCCGGAATGATGGAGCAGCGGATGAACAAGGCTTGTTCATGGTCCAAGGAAGTCTTCGATTTCCTAGTGACAGTACATATAACCTTGTGGGAAACTCTACAAGGAGCTGGCAATCCACTGACTTAAGAGTTCCATATGGACAGCGTCCCAGAAGCTTTAGGCTAGATGGGGTCTGGTCAGAATCTTCTGGGGAGCTTTGTATGGTTGGATCAGGTTCTAATTCCTCGGACCAAGGTAATTTACTGACCTTTCCTGTTGGTCTTAAACTACATAAACTCAAGAGTTCAAGTAGTCTTACTAGTTTAATTAGTGGCACCTTAGAGAGCTTGGTAACTTCTAAGAATGAACCAAATTATTTTGGACCAATCTCTATATCATTGCTTCCTTCCATGAACTACCAGTACACTTTTGTTTCAAACAAATCTCATAACAGCTATTCGGATGGAAGTGTTGTTCCCCCAAGTTCTTTAAAAATAGGGAGATTTTGCAGGGTATTCTCAAGAGCAATACTATTCCGTGAGTTACAACTGAGATATTCAAGCCATTGTGGTTCTGCAAAGAACTGCTCTCCTCTTGCTGTGTCTGATTTGCCTCGCGTCATGTCGTTGAATAATATTGAGTGTTTGGAGGATAGAAAAACGTTGCGACTTCTGGTAGATTTTGCAGCCAGTAGCATCAGTTACCAGAGGCCTTTCAATCCAACTACAACATTGGTTGCGGAAGGTTCATGGGATGCAAGGAAAAATCAGCTAAATGTTGTTGCTTGTCGGTTCGTGCATGCAAGAAATTCTTTGAGTCCTAGTCATGTGGGTGATTGTTCAACAAGATTGACCATGGGATTTCCTTCAATATGGACAATTGGAAATTCTAGCTGCATTGTGGGGAAAATTTGGAGCAACAAATCCGCGACAGAGGCAGGTTACTTCAAAAACATCACATTTGACAGTGCTCAAAGTGATTCATCTGTATTTCAAGGCCAGAGGTATGAGTATACCAAAATAGACAAAGCAACAAAGTTGTGCCCAAGAAAGAAGACTGATGCTGATGACAAGAACAACATTTATCCAAATCCTTTTTCTTATTACATGGGATTGGATATTACAGCCAACAGTTCTTCAGGAGAAGTTGGATGGGGCTATTCTGTCCCTCTCTCTGTTGATAACAAATTCTTCCAACCGTATTGGTACTCTCTGGAAGATGGAACTGAAGAATACCTTGGAGCTCCTGTGAGTGCTCCTGTGAGCGATAGAAACAACAATAGCAACAGGTACAACATCAGCTACAGAATAAGCATTAAAGCAGTAGATGGGGTTAGGTTTCCTAGTGGAGTGTCCCAACTTAATTCATTATATGAGATGGGGATTTTTGCTGAAGGGATATATGATGGCAGAGATGGAAGCCTGTGTATGGTAGGTTGCCGATACTTGAGCTCAACCAGTCACCAACAGCCAACATATGATTCTGTAGACTGTGAGATTGTTGTCAATGTTCAGTTTCCTCCAACAAATCCAAACAGTACCTATTCGGGTTTTATCAAGGGAAGCATCGAAAGCACACGAGAAATGTCTGATCCTCTTCATTTTGAGGGATTGGATTTGACCTCAGCTGCTGTTAACGTGGTCGAAGCAAGCCAATCCATTTGGAGAATGGATGTGGAGATCATATTGGTTGTTATATCCAACACACTCGCTTGTGTTTTTGGGGCATTACAACTCTTTCATGTGAAACGGAATCCGGATGTGCTCCCATCCATTTCTATCTTGATGCTGTATATTCTTGCTCTTGGCTACATGATACCTCTTATGCTAAACTTTGATGCCTTGTTCACACAACATGGTAGCCAAACTGTGTTCCTTGGAAGTGGATGGCTTGAACTCAATGAAGTAATTGTAAGGGTAGTAACAATGGTAGGTTTCTTGCTGCAAATTCGTCTTCTGCAGATAACAATGTCAGCAAAATCAGCAAATGGAAACCAAAAGGAGCTCTGGGCAGTGGAGAAGCTGGCTCTCTTTGTGGCTTTACCAGTATATGTTGGAGGGTCCTTGGTTGCTTTGCTTCTGATGAACTGGAGGAGGAACGATATTGCTGTGATGGTTTCGAGTGGTCAAAAGCATCCCATTTTGGGTACTATTTTGAAATCTTGTGCTGGTTTGTTCTTGGATGCATTTTTGTTCCCTCAAATTCTTCTCAACATGTTCTCCAAATCAACGGAAAAGGCATTGTCAGTTTCGTTCTTCGTTGGAACAACTCTTGTTCGTGTGCTGCCACATGCATATGATCTTTACAGGGCTCATACCTCTGGTCACCAATTGAAAGATTCATACATTTATGCAAGCCCTGCAGCAGACTTTTACTCTACTGCTTGGAATGTCATTATTCCTTTTGGAGGTCTACTTTTTGCTGTGATAATCTACTTGCAGCAGCGCTTTGGGGGTTGCTGCATTCTTCCTCAGAAGTTCATAGAGTTGGGTGAATATGAGAAGGTGCCTATCGTTACTGAAGCGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

922

Amino Acids

102.26

Weight (kDa)

8.16

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 68 - 210 5.1e-18 DUF2921 lipocalin-like domain
DUF2921_N PF25333 231 - 398 7.7e-27 DUF2921 lipocalin-like domain
DUF2921_N PF25333 425 - 617 1.1e-31 DUF2921 lipocalin-like domain
DUF2921 PF11145 629 - 906 1.7e-60 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1166
AccB1I GGYRCC 2 cut(s) 572, 2743
AccI GTMKAC 3 cut(s) 1250, 1725, 2650
AccII CGCG 2 cut(s) 855, 1166
AccIII TCCGGA 2 cut(s) 261, 1993
AciI CCGC 5 cut(s) 190, 256, 278, 977, 1164
AclI AACGTT 1 cut(s) 899
AclWI GGATC 2 cut(s) 475, 1823
AcsI RAATTY 7 cut(s) 34, 1045, 1123, 1146, 1424, 2184, 2439
AcuI CTGAAG 4 cut(s) 78, 1359, 1485, 1650
AfaI GTAC 6 cut(s) 334, 662, 1445, 1529, 1777, 2386
AfeI AGCGCT 1 cut(s) 2684
AfiI CCNNNNNNNGG 3 cut(s) 1666, 2381, 2645
AflII CTTAAG 1 cut(s) 382
AflIII ACRYGT 2 cut(s) 62, 2451
AgeI ACCGGT 1 cut(s) 197
AhlI ACTAGT 1 cut(s) 557
AjuI GAANNNNNNNTTGG 8 cut(s) 297, 329, 1318, 1350, 1458, 1490, 1702, 1734
AloI GAACNNNNNNTCC 2 cut(s) 696, 728
Alw21I GWGCWC 6 cut(s) 1210, 1483, 1495, 1691, 2004, 2244
AlwI GGATC 2 cut(s) 475, 1823
AlwNI CAGNNNCTG 1 cut(s) 1868
Aor13HI TCCGGA 2 cut(s) 261, 1993
Aor51HI AGCGCT 1 cut(s) 2684
AoxI GGCC 2 cut(s) 947, 1234
ApoI RAATTY 7 cut(s) 34, 1045, 1123, 1146, 1424, 2184, 2439
AsiGI ACCGGT 1 cut(s) 197
Asp700I GAANNNNTTC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 2685
AspS9I GGNCC 4 cut(s) 301, 487, 620, 2298
AsuHPI GGTGA 6 cut(s) 179, 230, 1082, 1691, 2555, 2741
AvaII GGWCC 4 cut(s) 301, 487, 620, 2298
BaeGI GKGCMC 1 cut(s) 1283
BanI GGYRCC 2 cut(s) 572, 2743
BanII GRGCYC 4 cut(s) 1483, 1691, 2244, 2551
BauI CACGAG 1 cut(s) 1815
BbsI GAAGAC 3 cut(s) 305, 1298, 2183
Bbv12I GWGCWC 6 cut(s) 1210, 1483, 1495, 1691, 2004, 2244
BbvCI CCTCAGC 1 cut(s) 1861
BclI TGATCA 1 cut(s) 118
BcuI ACTAGT 1 cut(s) 557
BfaI CTAG 6 cut(s) 324, 422, 558, 1059, 1128, 1581
BfmI CTRYAG 5 cut(s) 208, 1540, 1722, 2195, 2598
BfoI RGCGCY 1 cut(s) 2686
BfrI CTTAAG 1 cut(s) 382
BfuAI ACCTGC 1 cut(s) 1166
Bme18I GGWCC 4 cut(s) 301, 487, 620, 2298
BmgT120I GGNCC 4 cut(s) 301, 487, 620, 2298
BmiI GGNNCC 3 cut(s) 574, 2299, 2745
BmsI GCATC 9 cut(s) 88, 942, 982, 1288, 1812, 2013, 2065, 2380, 2410
BpiI GAAGAC 3 cut(s) 305, 1298, 2183
BpmI CTGGAG 1 cut(s) 2347
Bpu10I CCTNAGC 1 cut(s) 1861
BpuEI CTTGAG 4 cut(s) 87, 521, 742, 1705
BsaJI CCNNGG 7 cut(s) 304, 483, 490, 1092, 1474, 2113, 2301
BsaWI WCCGGW 3 cut(s) 197, 261, 1993
BsaXI ACNNNNNCTCC 4 cut(s) 1470, 1500, 2441, 2471
Bsc4I CCNNNNNNNGG 3 cut(s) 1666, 2381, 2645
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 5 cut(s) 658, 927, 1695, 2282, 2330
Bse3DI GCAATG 1 cut(s) 635
BseAI TCCGGA 2 cut(s) 261, 1993
BseDI CCNNGG 7 cut(s) 304, 483, 490, 1092, 1474, 2113, 2301
BseLI CCNNNNNNNGG 3 cut(s) 1666, 2381, 2645
BseMI GCAATG 1 cut(s) 635
BseMII CTCAG 3 cut(s) 779, 1875, 2723
BseNI ACTGG 5 cut(s) 658, 927, 1695, 2282, 2330
BseRI GAGGAG 3 cut(s) 129, 819, 2344
BseSI GKGCMC 1 cut(s) 1283
Bsh1236I CGCG 2 cut(s) 855, 1166
BshFI GGCC 2 cut(s) 949, 1236
BshNI GGYRCC 2 cut(s) 572, 2743
BshTI ACCGGT 1 cut(s) 197
BsiHKAI GWGCWC 6 cut(s) 1210, 1483, 1495, 1691, 2004, 2244
BsiSI CCGG 4 cut(s) 168, 198, 262, 1994
BslFI GGGAC 3 cut(s) 390, 1388, 1576
BslI CCNNNNNNNGG 3 cut(s) 1666, 2381, 2645
BsmFI GGGAC 3 cut(s) 390, 1388, 1576
BsmI GAATGC 1 cut(s) 2700
BsnI GGCC 2 cut(s) 949, 1236
Bsp1286I GDGCHC 8 cut(s) 1210, 1283, 1483, 1495, 1691, 2004, 2244, 2551
Bsp13I TCCGGA 2 cut(s) 261, 1993
Bsp143I GATC 5 cut(s) 118, 467, 1828, 1917, 2536
Bsp19I CCATGG 1 cut(s) 1092
BspACI CCGC 5 cut(s) 190, 256, 278, 977, 1164
BspANI GGCC 2 cut(s) 949, 1236
BspCNI CTCAG 3 cut(s) 780, 1874, 2722
BspEI TCCGGA 2 cut(s) 261, 1993
BspFNI CGCG 2 cut(s) 855, 1166
BspHI TCATGA 1 cut(s) 27
BspLI GGNNCC 3 cut(s) 574, 2299, 2745
BspMAI CTGCAG 2 cut(s) 2199, 2602
BspMI ACCTGC 1 cut(s) 1166
BspPI GGATC 2 cut(s) 475, 1823
BspT107I GGYRCC 2 cut(s) 572, 2743
BspTI CTTAAG 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 635
BsrFI RCCGGY 1 cut(s) 197
BsrI ACTGG 5 cut(s) 658, 927, 1695, 2282, 2330
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 7 cut(s) 304, 483, 490, 1092, 1474, 2113, 2301
BssMI GATC 5 cut(s) 118, 467, 1828, 1917, 2536
BssNAI GTATAC 1 cut(s) 1251
BssSI CACGAG 1 cut(s) 1815
BssT1I CCWWGG 6 cut(s) 304, 490, 1092, 1474, 2113, 2301
Bst1107I GTATAC 1 cut(s) 1251
Bst2BI CACGAG 1 cut(s) 1815
Bst4CI ACNGT 8 cut(s) 212, 332, 1205, 1370, 1437, 1730, 1775, 2107
Bst6I CTCTTC 1 cut(s) 1839
BstAFI CTTAAG 1 cut(s) 382
BstAPI GCANNNNNTGC 1 cut(s) 2597
BstC8I GCNNGC 5 cut(s) 368, 1038, 1888, 2262, 2593
BstDEI CTNAG 6 cut(s) 233, 577, 597, 788, 1861, 2709
BstDSI CCRYGG 1 cut(s) 1092
BstEII GGTNACC 1 cut(s) 2561
BstENI CCTNNNNNAGG 1 cut(s) 2643
BstFNI CGCG 2 cut(s) 855, 1166
BstH2I RGCGCY 1 cut(s) 2686
BstHHI GCGC 1 cut(s) 2685
BstKTI GATC 5 cut(s) 121, 470, 1831, 1920, 2539
BstMBI GATC 5 cut(s) 118, 467, 1828, 1917, 2536
BstMWI GCNNNNNNNGC 5 cut(s) 134, 1172, 1809, 2219, 2597
BstNSI RCATGY 3 cut(s) 1040, 2455, 2531
BstPI GGTNACC 1 cut(s) 2561
BstSFI CTRYAG 5 cut(s) 208, 1540, 1722, 2195, 2598
BstSLI GKGCMC 1 cut(s) 1283
BstUI CGCG 2 cut(s) 855, 1166
BstV2I GAAGAC 3 cut(s) 305, 1298, 2183
BstZ17I GTATAC 1 cut(s) 1251
BsuRI GGCC 2 cut(s) 949, 1236
BtgI CCRYGG 1 cut(s) 1092
BtsI GCAGTG 1 cut(s) 2256
BtsIMutI CAGTG 4 cut(s) 217, 375, 1210, 2256
BveI ACCTGC 1 cut(s) 1166
Cac8I GCNNGC 5 cut(s) 368, 1038, 1888, 2262, 2593
CaiI CAGNNNCTG 1 cut(s) 1868
CciI TCATGA 1 cut(s) 27
CfoI GCGC 1 cut(s) 2685
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 4 cut(s) 301, 487, 620, 2298
CseI GACGC 3 cut(s) 392, 844, 2751
Csp6I GTAC 6 cut(s) 333, 661, 1444, 1528, 1776, 2385
CspAI ACCGGT 1 cut(s) 197
CviQI GTAC 6 cut(s) 333, 661, 1444, 1528, 1776, 2385
DdeI CTNAG 6 cut(s) 233, 577, 597, 788, 1861, 2709
DpnI GATC 5 cut(s) 120, 469, 1830, 1919, 2538
DpnII GATC 5 cut(s) 118, 467, 1828, 1917, 2536
DraI TTTAAA 1 cut(s) 729
Eam1104I CTCTTC 1 cut(s) 1839
EarI CTCTTC 1 cut(s) 1839
Ecl136II GAGCTC 3 cut(s) 1481, 1689, 2242
Eco130I CCWWGG 6 cut(s) 304, 490, 1092, 1474, 2113, 2301
Eco147I AGGCCT 1 cut(s) 949
Eco24I GRGCYC 4 cut(s) 1483, 1691, 2244, 2551
Eco47I GGWCC 4 cut(s) 301, 487, 620, 2298
Eco47III AGCGCT 1 cut(s) 2684
Eco53kI GAGCTC 3 cut(s) 1481, 1689, 2242
Eco57I CTGAAG 4 cut(s) 78, 1359, 1485, 1650
Eco91I GGTNACC 1 cut(s) 2561
EcoICRI GAGCTC 3 cut(s) 1481, 1689, 2242
EcoNI CCTNNNNNAGG 1 cut(s) 2643
EcoO109I RGGNCCY 1 cut(s) 2298
EcoO65I GGTNACC 1 cut(s) 2561
EcoT14I CCWWGG 6 cut(s) 304, 490, 1092, 1474, 2113, 2301
EcoT22I ATGCAT 2 cut(s) 2425, 2533
EcoT38I GRGCYC 4 cut(s) 1483, 1691, 2244, 2551
ErhI CCWWGG 6 cut(s) 304, 490, 1092, 1474, 2113, 2301
FalI AAGNNNNNCTT 6 cut(s) 297, 329, 1033, 1065, 1458, 1490
FaqI GGGAC 3 cut(s) 390, 1388, 1576
FauNDI CATATG 3 cut(s) 394, 1714, 2533
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 3 cut(s) 1250, 1725, 2650
FriOI GRGCYC 4 cut(s) 1483, 1691, 2244, 2551
FspBI CTAG 6 cut(s) 324, 422, 558, 1059, 1128, 1581
GlaI GCGC 1 cut(s) 2684
GsuI CTGGAG 1 cut(s) 2347
HaeII RGCGCY 1 cut(s) 2686
HaeIII GGCC 2 cut(s) 949, 1236
HapII CCGG 4 cut(s) 168, 198, 262, 1994
HgaI GACGC 3 cut(s) 392, 844, 2751
HhaI GCGC 1 cut(s) 2685
Hin6I GCGC 1 cut(s) 2683
HinP1I GCGC 1 cut(s) 2683
HincII GTYRAC 1 cut(s) 1873
HindII GTYRAC 1 cut(s) 1873
HindIII AAGCTT 1 cut(s) 412
HinfI GANTC 6 cut(s) 440, 1054, 1217, 1718, 1990, 2576
HpaI GTTAAC 1 cut(s) 1873
HpaII CCGG 4 cut(s) 168, 198, 262, 1994
HphI GGTGA 6 cut(s) 179, 230, 1082, 1691, 2555, 2741
Hpy166II GTNNAC 7 cut(s) 187, 663, 1251, 1726, 1873, 2085, 2651
Hpy188I TCNGA 9 cut(s) 97, 240, 439, 487, 700, 844, 1828, 2319, 2712
Hpy188III TCNNGA 8 cut(s) 28, 262, 538, 759, 1377, 1451, 1994, 2020
Hpy8I GTNNAC 7 cut(s) 187, 663, 1251, 1726, 1873, 2085, 2651
HpyAV CCTTC 5 cut(s) 654, 974, 1113, 1625, 2734
HpyCH4III ACNGT 8 cut(s) 212, 332, 1205, 1370, 1437, 1730, 1775, 2107
HpyCH4IV ACGT 3 cut(s) 64, 899, 1875
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 1172, 1809, 2219, 2597
HpyF3I CTNAG 6 cut(s) 233, 577, 597, 788, 1861, 2709
HpySE526I ACGT 3 cut(s) 64, 899, 1875
HspAI GCGC 1 cut(s) 2683
Kpn2I TCCGGA 2 cut(s) 261, 1993
Ksp22I TGATCA 1 cut(s) 118
KspAI GTTAAC 1 cut(s) 1873
Kzo9I GATC 5 cut(s) 118, 467, 1828, 1917, 2536
LweI GCATC 9 cut(s) 88, 942, 982, 1288, 1812, 2013, 2065, 2380, 2410
MaeI CTAG 6 cut(s) 324, 422, 558, 1059, 1128, 1581
MaeII ACGT 3 cut(s) 64, 899, 1875
MalI GATC 5 cut(s) 120, 469, 1830, 1919, 2538
MboI GATC 5 cut(s) 118, 467, 1828, 1917, 2536
MfeI CAATTG 4 cut(s) 132, 246, 1116, 2567
MhlI GDGCHC 8 cut(s) 1210, 1283, 1483, 1495, 1691, 2004, 2244, 2551
MlyI GAGTC 1 cut(s) 1063
MmeI TCCRAC 8 cut(s) 445, 983, 1366, 1456, 1784, 1962, 2272, 2479
Mph1103I ATGCAT 2 cut(s) 2425, 2533
MroI TCCGGA 2 cut(s) 261, 1993
MroXI GAANNNNTTC 1 cut(s) 35
MslI CAYNNNNRTG 3 cut(s) 26, 1068, 2532
MspA1I CMGCKG 2 cut(s) 278, 1865
MspCI CTTAAG 1 cut(s) 382
MspI CCGG 4 cut(s) 168, 198, 262, 1994
MunI CAATTG 4 cut(s) 132, 246, 1116, 2567
Mva1269I GAATGC 1 cut(s) 2700
MvnI CGCG 2 cut(s) 855, 1166
MwoI GCNNNNNNNGC 5 cut(s) 134, 1172, 1809, 2219, 2597
NcoI CCATGG 1 cut(s) 1092
NdeI CATATG 3 cut(s) 394, 1714, 2533
NdeII GATC 5 cut(s) 118, 467, 1828, 1917, 2536
NlaIV GGNNCC 3 cut(s) 574, 2299, 2745
NmuCI GTSAC 4 cut(s) 58, 326, 1697, 2561
NsiI ATGCAT 2 cut(s) 2425, 2533
NspI RCATGY 3 cut(s) 1040, 2455, 2531
PaeI GCATGC 1 cut(s) 1040
PagI TCATGA 1 cut(s) 27
PceI AGGCCT 1 cut(s) 949
PciI ACATGT 1 cut(s) 2451
PctI GAATGC 1 cut(s) 2700
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 5 cut(s) 440, 1217, 1718, 1990, 2576
PflFI GACNNNGTC 1 cut(s) 402
PinAI ACCGGT 1 cut(s) 197
PleI GAGTC 1 cut(s) 1062
PpsI GAGTC 1 cut(s) 1062
PpuMI RGGWCCY 1 cut(s) 2298
PscI ACATGT 1 cut(s) 2451
Psp124BI GAGCTC 3 cut(s) 1483, 1691, 2244
Psp1406I AACGTT 1 cut(s) 899
Psp5II RGGWCCY 1 cut(s) 2298
PspEI GGTNACC 1 cut(s) 2561
PspN4I GGNNCC 3 cut(s) 574, 2299, 2745
PspPI GGNCC 4 cut(s) 301, 487, 620, 2298
PspPPI RGGWCCY 1 cut(s) 2298
PsrI GAACNNNNNNTAC 2 cut(s) 644, 676
PstI CTGCAG 2 cut(s) 2199, 2602
PstNI CAGNNNCTG 1 cut(s) 1868
PsyI GACNNNGTC 1 cut(s) 402
PvuII CAGCTG 1 cut(s) 1865
RsaI GTAC 6 cut(s) 334, 662, 1445, 1529, 1777, 2386
RsaNI GTAC 6 cut(s) 333, 661, 1444, 1528, 1776, 2385
RseI CAYNNNNRTG 3 cut(s) 26, 1068, 2532
SacI GAGCTC 3 cut(s) 1483, 1691, 2244
Sau3AI GATC 5 cut(s) 118, 467, 1828, 1917, 2536
Sau96I GGNCC 4 cut(s) 301, 487, 620, 2298
SchI GAGTC 1 cut(s) 1063
SduI GDGCHC 8 cut(s) 1210, 1283, 1483, 1495, 1691, 2004, 2244, 2551
SfaNI GCATC 9 cut(s) 88, 942, 982, 1288, 1812, 2013, 2065, 2380, 2410
SfcI CTRYAG 5 cut(s) 208, 1540, 1722, 2195, 2598
SinI GGWCC 4 cut(s) 301, 487, 620, 2298
SmiMI CAYNNNNRTG 3 cut(s) 26, 1068, 2532
SmlI CTYRAG 5 cut(s) 102, 382, 536, 757, 1684
SmoI CTYRAG 5 cut(s) 102, 382, 536, 757, 1684
SpeI ACTAGT 1 cut(s) 557
SphI GCATGC 1 cut(s) 1040
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 5 cut(s) 190, 256, 278, 977, 1164
SspI AATATT 1 cut(s) 874
SspMI CTAG 6 cut(s) 324, 422, 558, 1059, 1128, 1581
SstI GAGCTC 3 cut(s) 1483, 1691, 2244
StuI AGGCCT 1 cut(s) 949
StyI CCWWGG 6 cut(s) 304, 490, 1092, 1474, 2113, 2301
TaaI ACNGT 8 cut(s) 212, 332, 1205, 1370, 1437, 1730, 1775, 2107
TaiI ACGT 3 cut(s) 67, 902, 1878
TaqI TCGA 4 cut(s) 316, 1806, 1881, 2357
TatI WGTACW 2 cut(s) 332, 660
TfiI GAWTC 5 cut(s) 440, 1217, 1718, 1990, 2576
TscAI CASTG 4 cut(s) 217, 382, 1210, 2256
TseFI GTSAC 4 cut(s) 58, 326, 1697, 2561
Tsp45I GTSAC 4 cut(s) 58, 326, 1697, 2561
TspGWI ACGGA 3 cut(s) 764, 2002, 2483
TspRI CASTG 4 cut(s) 217, 382, 1210, 2256
Tth111I GACNNNGTC 1 cut(s) 402
Vha464I CTTAAG 1 cut(s) 382
VpaK11BI GGWCC 4 cut(s) 301, 487, 620, 2298
XagI CCTNNNNNAGG 1 cut(s) 2643
XapI RAATTY 7 cut(s) 34, 1045, 1123, 1146, 1424, 2184, 2439
XceI RCATGY 3 cut(s) 1040, 2455, 2531
XcmI CCANNNNNNNNNTGG 1 cut(s) 1903
XmiI GTMKAC 3 cut(s) 1250, 1725, 2650
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 6 cut(s) 324, 422, 558, 1059, 1128, 1581
Zsp2I ATGCAT 2 cut(s) 2425, 2533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.