Rorug05G0305500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0013631
Physical Location & Seq
Reverse (-)
35588028 .. 35596523
8496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0305500.1

Sequence Viewer

Length: 1860 bp
ATGGAGGAGGAGCCTCAGAACGGTAACACGATCGCGGCGGAGAGTGAGGAGGAGCCGATAGTCGGGCCTGGCCCAGCCCCTCGAGCTCGGCCCAAGCGCCCTCTTCAGTTCGAGCAGGCTTACCTCGACTCCCTTCCCTCCGCTCTCATGTATGAAAAGAGTTATATGCACCGAGATGTGGTTACTCATGTTGCTGTGTCGGCAGCTGAATTTGTCATCACTGGAAGTGTTGATGGACATTTGAAGTTTTGGAAGAAAAAGCCCATTGGCATTGAATTTGCGAAGCATTTTAGGTCCCACCTTGGTCCCATTGAAGGCCTAGCTGTTAGTGCTGATGGTTTGCTTTGCTGTACAATTTCAAATGATCCCTCTGTGAAGATATATGATGTTGTCAACTATGATATGATGGCCATGATTCACACATCCTTTGTTCCTGGTGCTGTTGAGTGGGTCTACAAACAAGGGGATGTCAAAGCCAGGCTTGCCATCAGTGATAGAAACTCATCATCTGTACACATTTTTGATGCACGGGCTGGTACAAATGAACCTTTAATCTCCAAAAAGATACACTTGGGGCCAGTGAAACTCATGAGATACAATCATGAATATGACACGGTCATATCAGCTGACGAGAAGGGAATGATTGAGTATTGGAATCCCGCTACACTTGAGTTCCCAGAGAGTGGGATGAAATTTAGATTCAAAAGTGACACGAATCTCTTCGATATTGTGAAATGCAAAACTTCAGTTTCTTCTATTGAGGTTAGCCCAGATGGCAAACAATTTTCGGTCACGTCACCTGACCGTAGGATACGTGTATTTTGGTTTCTAACGGGTAAAATACGACGAGTTTATGATGAATCTCTTGAGGTGGCCCAAGACCTTCAAAGAAGTGACATACCTTTGTACCAGCTGGAAGCTATTGACTTTGGTCGAAGAATGGCTGTTGAGAAAGAAATAGAGAAAACAGAAACTGCCCCACAGCCGAATGCAGTTTTTGATGAAAGCTCAAATTTTCTTATTTATCCAACTCTGCTTGGGATAAAAGTGGTAAACCTACACACTAATAAAGTTGCCCGGATTCTAGGAAAAGTGGAAAACAATGATAGGTTTTTGAGAATTGCCTTATACCAAGGTGACAGAAGCAGTAAAAAAGTTAGAAAAATTCCTGCAGCTGCAGCAAATGTCAATGAGAGCAAAGAGCCTCTGTCGGATCCCACTCTCATCTGTTGTGCCTTCAAGAAACACAGAATCTATCTATTCAGTCAGAGAGAGCCAGAAGAGCCTGAAGATGCAACCAAGGGAAGAGATGTGTTCAATGAGAAGCCTCCTGCTGATGAACTCTTAGCTGCATCTGATATAGGCAAATCAGTCACGACATCCCTTCCTGACAATGTGATTATGCATACTACAATGGGAGACATACACATGAAGTTGTATCCAGAGGAATGCCCTAAAACTGTGGAGAACTTCACAACGCACTGTCGGAATGGCTATTATGATAACCTCATATTTCATCGAGTCATCAAAGGTTTCATGATACAAACAGGAGATCCTTTAGGAGATGGTACTGGTGGGCAATCTATTTGGGGAAGGGAGTTTGAGGATGAATTTCACAAAAGTTTACGACATGATAGGCCTTTTACTGTATCAATGGCAAATGCTGGCCCAAACACAAATGGATCTCAGTTCTTTATCACCACAGTGGCTACTCCTTGGCTGGACAACAAGCACACAGTTTTTGGAAGAGTGATCAAGGGAATGGATGTGGTTCAGGCTATAGAAAAAGTAAAGACAAACAAGGATGACAAGCCCCACCAAGATGTGAAAATTCTAAATGTTACTGTCCCCAAGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

619

Amino Acids

69.66

Weight (kDa)

6.37

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 55 - 218 2.4e-07 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 56 - 222 2.2e-10 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 56 - 274 1.6e-06 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 57 - 283 3e-13 THOC3 beta-propeller domain
WDR55 PF24796 61 - 220 6.9e-06 WDR55
Pro_isomerase PF00160 466 - 616 3.2e-57 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 683
AccBSI CCGCTC 1 cut(s) 143
AccI GTMKAC 1 cut(s) 453
AccII CGCG 1 cut(s) 35
AciI CCGC 4 cut(s) 35, 38, 141, 660
AclWI GGATC 5 cut(s) 359, 1208, 1221, 1547, 1690
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1610, 1830
AcuI CTGAAG 3 cut(s) 89, 729, 1308
AfaI GTAC 5 cut(s) 352, 513, 538, 908, 1570
AfiI CCNNNNNNNGG 5 cut(s) 20, 62, 178, 314, 683
AflIII ACRYGT 1 cut(s) 814
AgsI TTSAA 8 cut(s) 244, 275, 314, 360, 703, 887, 1240, 1318
AjiI CACGTC 1 cut(s) 795
AjnI CCWGG 3 cut(s) 67, 433, 476
AleI CACNNNNGTG 1 cut(s) 1703
AluBI AGCT 9 cut(s) 86, 206, 323, 626, 913, 920, 1008, 1175, 1349
AluI AGCT 9 cut(s) 86, 206, 323, 626, 913, 920, 1008, 1175, 1349
Alw21I GWGCWC 1 cut(s) 88
Alw26I GTCTC 1 cut(s) 1413
AlwI GGATC 5 cut(s) 359, 1208, 1221, 1547, 1690
AlwNI CAGNNNCTG 1 cut(s) 974
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 9 cut(s) 65, 70, 89, 316, 408, 575, 873, 1637, 1666
ApeKI GCWGC 5 cut(s) 203, 1172, 1175, 1178, 1349
ApoI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1610, 1830
Asp700I GAANNNNTTC 1 cut(s) 719
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 8 cut(s) 65, 71, 90, 294, 305, 575, 874, 1667
AsuC2I CCSGG 1 cut(s) 1078
AsuHPI GGTGA 3 cut(s) 789, 1148, 1690
AvaI CYCGRG 1 cut(s) 81
AvaII GGWCC 2 cut(s) 294, 305
BaeI ACNNNNGTAYC 2 cut(s) 890, 923
BalI TGGCCA 1 cut(s) 410
BamHI GGATCC 1 cut(s) 1213
BanII GRGCYC 1 cut(s) 88
Bbv12I GWGCWC 1 cut(s) 88
BbvI GCAGC 5 cut(s) 215, 1162, 1184, 1190, 1336
BccI CCATC 6 cut(s) 227, 329, 400, 494, 767, 1559
BciT130I CCWGG 3 cut(s) 69, 435, 478
BciVI GTATCC 2 cut(s) 804, 1449
BclI TGATCA 1 cut(s) 1752
BcnI CCSGG 1 cut(s) 1078
BcoDI GTCTC 1 cut(s) 1413
BfaI CTAG 2 cut(s) 320, 1085
BfmI CTRYAG 3 cut(s) 1170, 1176, 1779
BfoI RGCGCY 1 cut(s) 100
BfuI GTATCC 2 cut(s) 804, 1449
BglI GCCNNNNNGGC 1 cut(s) 774
BisI GCNGC 6 cut(s) 36, 204, 1173, 1176, 1179, 1350
BlsI GCNGC 6 cut(s) 37, 205, 1174, 1177, 1180, 1351
Bme1390I CCNGG 4 cut(s) 69, 435, 478, 1078
Bme18I GGWCC 2 cut(s) 294, 305
BmeT110I CYCGRG 1 cut(s) 81
BmgBI CACGTC 1 cut(s) 795
BmgT120I GGNCC 8 cut(s) 65, 71, 90, 294, 305, 575, 874, 1667
BmiI GGNNCC 6 cut(s) 12, 54, 296, 307, 576, 1215
BmrFI CCNGG 4 cut(s) 69, 435, 478, 1078
BmsI GCATC 3 cut(s) 514, 1282, 1361
BoxI GACNNNNGTC 1 cut(s) 930
BpuEI CTTGAG 2 cut(s) 689, 887
BpuMI CCSGG 1 cut(s) 1078
BsaAI YACGTR 1 cut(s) 815
BsaJI CCNNGG 4 cut(s) 301, 1132, 1299, 1715
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 62, 178, 314, 683
Bse1I ACTGG 3 cut(s) 226, 578, 1576
BseBI CCWGG 3 cut(s) 69, 435, 478
BseDI CCNNGG 4 cut(s) 301, 1132, 1299, 1715
BseGI GGATG 7 cut(s) 422, 472, 693, 1379, 1612, 1771, 1810
BseLI CCNNNNNNNGG 5 cut(s) 20, 62, 178, 314, 683
BseMII CTCAG 2 cut(s) 29, 1700
BseNI ACTGG 3 cut(s) 226, 578, 1576
BseRI GAGGAG 4 cut(s) 20, 23, 62, 65
BseXI GCAGC 5 cut(s) 215, 1162, 1184, 1190, 1336
BseYI CCCAGC 1 cut(s) 73
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 9 cut(s) 67, 72, 91, 318, 410, 577, 875, 1639, 1668
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 1 cut(s) 1078
BslFI GGGAC 3 cut(s) 280, 291, 1832
BslI CCNNNNNNNGG 5 cut(s) 20, 62, 178, 314, 683
BsmAI GTCTC 1 cut(s) 1413
BsmFI GGGAC 3 cut(s) 280, 291, 1832
BsmI GAATGC 2 cut(s) 994, 1454
BsnI GGCC 9 cut(s) 67, 72, 91, 318, 410, 577, 875, 1639, 1668
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 1 cut(s) 88
Bsp1407I TGTACA 2 cut(s) 350, 511
Bsp143I GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
BspACI CCGC 4 cut(s) 35, 38, 141, 660
BspANI GGCC 9 cut(s) 67, 72, 91, 318, 410, 577, 875, 1639, 1668
BspCNI CTCAG 2 cut(s) 28, 1699
BspFNI CGCG 1 cut(s) 35
BspHI TCATGA 3 cut(s) 588, 601, 1536
BspLI GGNNCC 6 cut(s) 12, 54, 296, 307, 576, 1215
BspMAI CTGCAG 2 cut(s) 1174, 1180
BspPI GGATC 5 cut(s) 359, 1208, 1221, 1547, 1690
BspQI GCTCTTC 1 cut(s) 1275
BsrBI CCGCTC 1 cut(s) 143
BsrGI TGTACA 2 cut(s) 350, 511
BsrI ACTGG 3 cut(s) 226, 578, 1576
BssECI CCNNGG 4 cut(s) 301, 1132, 1299, 1715
BssMI GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
BssT1I CCWWGG 4 cut(s) 301, 1132, 1299, 1715
Bst2UI CCWGG 3 cut(s) 69, 435, 478
Bst4CI ACNGT 9 cut(s) 23, 616, 806, 1462, 1484, 1648, 1705, 1738, 1846
Bst6I CTCTTC 5 cut(s) 108, 725, 1275, 1300, 1741
BstAUI TGTACA 2 cut(s) 350, 511
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 3 cut(s) 117, 483, 1666
BstDEI CTNAG 3 cut(s) 15, 1345, 1686
BstF5I GGATG 7 cut(s) 422, 472, 693, 1379, 1612, 1771, 1810
BstFNI CGCG 1 cut(s) 35
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 6 cut(s) 33, 367, 1216, 1555, 1685, 1755
BstMAI GTCTC 1 cut(s) 1413
BstMBI GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 7 cut(s) 83, 200, 329, 482, 774, 1178, 1282
BstNI CCWGG 3 cut(s) 69, 435, 478
BstPAI GACNNNNGTC 1 cut(s) 930
BstSCI CCNGG 4 cut(s) 67, 433, 476, 1076
BstSFI CTRYAG 3 cut(s) 1170, 1176, 1779
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 5 cut(s) 215, 1162, 1184, 1190, 1336
BstX2I RGATCY 3 cut(s) 1213, 1552, 1682
BstYI RGATCY 3 cut(s) 1213, 1552, 1682
BsuI GTATCC 2 cut(s) 804, 1449
BsuRI GGCC 9 cut(s) 67, 72, 91, 318, 410, 577, 875, 1639, 1668
BtrI CACGTC 1 cut(s) 795
BtsCI GGATG 7 cut(s) 422, 472, 693, 1379, 1612, 1771, 1810
BtsIMutI CAGTG 5 cut(s) 219, 496, 585, 1480, 1710
Cac8I GCNNGC 3 cut(s) 117, 483, 1666
CaiI CAGNNNCTG 1 cut(s) 974
CciI TCATGA 3 cut(s) 588, 601, 1536
CfoI GCGC 1 cut(s) 99
Cfr13I GGNCC 8 cut(s) 65, 71, 90, 294, 305, 575, 874, 1667
Csp6I GTAC 5 cut(s) 351, 512, 537, 907, 1569
CviAII CATG 8 cut(s) 148, 188, 412, 589, 602, 1429, 1537, 1631
CviQI GTAC 5 cut(s) 351, 512, 537, 907, 1569
DdeI CTNAG 3 cut(s) 15, 1345, 1686
DpnI GATC 6 cut(s) 32, 366, 1215, 1554, 1684, 1754
DpnII GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
EaeI YGGCCR 1 cut(s) 408
Eam1104I CTCTTC 5 cut(s) 108, 725, 1275, 1300, 1741
EarI CTCTTC 5 cut(s) 108, 725, 1275, 1300, 1741
EciI GGCGGA 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 86
Eco130I CCWWGG 4 cut(s) 301, 1132, 1299, 1715
Eco147I AGGCCT 2 cut(s) 318, 1639
Eco24I GRGCYC 1 cut(s) 88
Eco47I GGWCC 2 cut(s) 294, 305
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 3 cut(s) 89, 729, 1308
Eco88I CYCGRG 1 cut(s) 81
EcoICRI GAGCTC 1 cut(s) 86
EcoO109I RGGNCCY 1 cut(s) 294
EcoRII CCWGG 3 cut(s) 67, 433, 476
EcoT14I CCWWGG 4 cut(s) 301, 1132, 1299, 1715
EcoT22I ATGCAT 1 cut(s) 1407
EcoT38I GRGCYC 1 cut(s) 88
ErhI CCWWGG 4 cut(s) 301, 1132, 1299, 1715
FaeI CATG 8 cut(s) 151, 191, 415, 592, 605, 1432, 1540, 1634
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 554, 586
FaqI GGGAC 3 cut(s) 280, 291, 1832
FatI CATG 8 cut(s) 147, 187, 411, 588, 601, 1428, 1536, 1630
FauI CCCGC 1 cut(s) 667
FbaI TGATCA 1 cut(s) 1752
FblI GTMKAC 1 cut(s) 453
Fnu4HI GCNGC 6 cut(s) 36, 204, 1173, 1176, 1179, 1350
FokI GGATG 7 cut(s) 409, 479, 700, 1366, 1619, 1778, 1817
FriOI GRGCYC 1 cut(s) 88
Fsp4HI GCNGC 6 cut(s) 36, 204, 1173, 1176, 1179, 1350
FspBI CTAG 2 cut(s) 320, 1085
GlaI GCGC 1 cut(s) 98
GluI GCNGC 6 cut(s) 36, 204, 1173, 1176, 1179, 1350
GsaI CCCAGC 1 cut(s) 77
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 9 cut(s) 67, 72, 91, 318, 410, 577, 875, 1639, 1668
HapII CCGG 1 cut(s) 1078
HhaI GCGC 1 cut(s) 99
Hin1II CATG 8 cut(s) 151, 191, 415, 592, 605, 1432, 1540, 1634
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 9 cut(s) 128, 415, 655, 699, 715, 860, 1081, 1251, 1521
HpaII CCGG 1 cut(s) 1078
HphI GGTGA 3 cut(s) 789, 1148, 1690
Hpy166II GTNNAC 5 cut(s) 394, 454, 514, 1054, 1625
Hpy188I TCNGA 5 cut(s) 18, 1213, 1269, 1357, 1488
Hpy188III TCNNGA 8 cut(s) 589, 602, 866, 1240, 1375, 1388, 1442, 1537
Hpy8I GTNNAC 5 cut(s) 394, 454, 514, 1054, 1625
Hpy99I CGWCG 1 cut(s) 849
HpyAV CCTTC 7 cut(s) 143, 308, 628, 893, 1246, 1394, 1587
HpyCH4III ACNGT 9 cut(s) 23, 616, 806, 1462, 1484, 1648, 1705, 1738, 1846
HpyCH4IV ACGT 2 cut(s) 794, 814
HpyCH4V TGCA 9 cut(s) 169, 527, 738, 992, 1172, 1178, 1295, 1352, 1405
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 200, 329, 482, 774, 1178, 1282
HpyF3I CTNAG 3 cut(s) 15, 1345, 1686
HpySE526I ACGT 2 cut(s) 794, 814
Hsp92II CATG 8 cut(s) 151, 191, 415, 592, 605, 1432, 1540, 1634
HspAI GCGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 1752
Kzo9I GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
LguI GCTCTTC 1 cut(s) 1275
LmnI GCTCC 2 cut(s) 10, 52
Lsp1109I GCAGC 5 cut(s) 215, 1162, 1184, 1190, 1336
LweI GCATC 3 cut(s) 514, 1282, 1361
MaeI CTAG 2 cut(s) 320, 1085
MaeII ACGT 2 cut(s) 794, 814
MaeIII GTNAC 9 cut(s) 23, 181, 707, 790, 795, 893, 1136, 1372, 1840
MalI GATC 6 cut(s) 32, 366, 1215, 1554, 1684, 1754
MbiI CCGCTC 1 cut(s) 143
MboI GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
MflI RGATCY 3 cut(s) 1213, 1552, 1682
MhlI GDGCHC 1 cut(s) 88
MlsI TGGCCA 1 cut(s) 410
MluNI TGGCCA 1 cut(s) 410
MlyI GAGTC 2 cut(s) 122, 1530
MmeI TCCRAC 3 cut(s) 1052, 1191, 1466
Mox20I TGGCCA 1 cut(s) 410
Mph1103I ATGCAT 1 cut(s) 1407
MroXI GAANNNNTTC 1 cut(s) 719
MscI TGGCCA 1 cut(s) 410
MseI TTAA 2 cut(s) 551, 1858
MslI CAYNNNNRTG 5 cut(s) 174, 606, 1427, 1703, 1821
Msp20I TGGCCA 1 cut(s) 410
MspA1I CMGCKG 4 cut(s) 206, 626, 913, 1175
MspI CCGG 1 cut(s) 1078
MspR9I CCNGG 4 cut(s) 69, 435, 478, 1078
Mva1269I GAATGC 2 cut(s) 994, 1454
MvaI CCWGG 3 cut(s) 69, 435, 478
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 7 cut(s) 83, 200, 329, 482, 774, 1178, 1282
NciI CCSGG 1 cut(s) 1078
NdeII GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
NlaIII CATG 8 cut(s) 151, 191, 415, 592, 605, 1432, 1540, 1634
NlaIV GGNNCC 6 cut(s) 12, 54, 296, 307, 576, 1215
NmeAIII GCCGAG 1 cut(s) 67
NmuCI GTSAC 6 cut(s) 707, 790, 795, 893, 1136, 1372
NsiI ATGCAT 1 cut(s) 1407
OliI CACNNNNGTG 1 cut(s) 1703
PaeR7I CTCGAG 1 cut(s) 81
PagI TCATGA 3 cut(s) 588, 601, 1536
PceI AGGCCT 2 cut(s) 318, 1639
PciSI GCTCTTC 1 cut(s) 1275
PctI GAATGC 2 cut(s) 994, 1454
PdmI GAANNNNTTC 1 cut(s) 719
PfeI GAWTC 7 cut(s) 415, 655, 699, 715, 860, 1081, 1251
PflFI GACNNNGTC 1 cut(s) 614
PflMI CCANNNNNTGG 1 cut(s) 683
PkrI GCNGC 6 cut(s) 37, 205, 1174, 1177, 1180, 1351
Ple19I CGATCG 1 cut(s) 33
PleI GAGTC 2 cut(s) 122, 1529
PpsI GAGTC 2 cut(s) 122, 1529
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 1 cut(s) 294
PshAI GACNNNNGTC 1 cut(s) 930
Psp124BI GAGCTC 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 294
Psp6I CCWGG 3 cut(s) 67, 433, 476
PspFI CCCAGC 1 cut(s) 73
PspGI CCWGG 3 cut(s) 67, 433, 476
PspN4I GGNNCC 6 cut(s) 12, 54, 296, 307, 576, 1215
PspPI GGNCC 8 cut(s) 65, 71, 90, 294, 305, 575, 874, 1667
PspPPI RGGWCCY 1 cut(s) 294
PspXI VCTCGAGB 1 cut(s) 81
PstI CTGCAG 2 cut(s) 1174, 1180
PstNI CAGNNNCTG 1 cut(s) 974
PsuI RGATCY 3 cut(s) 1213, 1552, 1682
PsyI GACNNNGTC 1 cut(s) 614
PvuI CGATCG 1 cut(s) 33
PvuII CAGCTG 4 cut(s) 206, 626, 913, 1175
RsaI GTAC 5 cut(s) 352, 513, 538, 908, 1570
RsaNI GTAC 5 cut(s) 351, 512, 537, 907, 1569
RseI CAYNNNNRTG 5 cut(s) 174, 606, 1427, 1703, 1821
SacI GAGCTC 1 cut(s) 88
SapI GCTCTTC 1 cut(s) 1275
SaqAI TTAA 2 cut(s) 551, 1858
SatI GCNGC 6 cut(s) 36, 204, 1173, 1176, 1179, 1350
Sau3AI GATC 6 cut(s) 30, 364, 1213, 1552, 1682, 1752
Sau96I GGNCC 8 cut(s) 65, 71, 90, 294, 305, 575, 874, 1667
SchI GAGTC 2 cut(s) 122, 1530
ScrFI CCNGG 4 cut(s) 69, 435, 478, 1078
SduI GDGCHC 1 cut(s) 88
SfaNI GCATC 3 cut(s) 514, 1282, 1361
SfcI CTRYAG 3 cut(s) 1170, 1176, 1779
Sfr274I CTCGAG 1 cut(s) 81
SinI GGWCC 2 cut(s) 294, 305
SlaI CTCGAG 1 cut(s) 81
SmiMI CAYNNNNRTG 5 cut(s) 174, 606, 1427, 1703, 1821
SmlI CTYRAG 3 cut(s) 81, 668, 866
SmoI CTYRAG 3 cut(s) 81, 668, 866
SseBI AGGCCT 2 cut(s) 318, 1639
SsiI CCGC 4 cut(s) 35, 38, 141, 660
SspMI CTAG 2 cut(s) 320, 1085
SstI GAGCTC 1 cut(s) 88
StuI AGGCCT 2 cut(s) 318, 1639
StyD4I CCNGG 4 cut(s) 67, 433, 476, 1076
StyI CCWWGG 4 cut(s) 301, 1132, 1299, 1715
TaaI ACNGT 9 cut(s) 23, 616, 806, 1462, 1484, 1648, 1705, 1738, 1846
TaiI ACGT 2 cut(s) 797, 817
TaqI TCGA 6 cut(s) 82, 111, 126, 723, 934, 1519
TaqII GACCGA 1 cut(s) 778
TatI WGTACW 2 cut(s) 350, 511
TauI GCSGC 1 cut(s) 38
TfiI GAWTC 7 cut(s) 415, 655, 699, 715, 860, 1081, 1251
Tru1I TTAA 2 cut(s) 551, 1858
Tru9I TTAA 2 cut(s) 551, 1858
TscAI CASTG 5 cut(s) 226, 496, 585, 1487, 1710
TseFI GTSAC 6 cut(s) 707, 790, 795, 893, 1136, 1372
TseI GCWGC 5 cut(s) 203, 1172, 1175, 1178, 1349
Tsp45I GTSAC 6 cut(s) 707, 790, 795, 893, 1136, 1372
TspRI CASTG 5 cut(s) 226, 496, 585, 1487, 1710
Tth111I GACNNNGTC 1 cut(s) 614
Van91I CCANNNNNTGG 1 cut(s) 683
VpaK11BI GGWCC 2 cut(s) 294, 305
XapI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1610, 1830
XhoI CTCGAG 1 cut(s) 81
XmiI GTMKAC 1 cut(s) 453
XmnI GAANNNNTTC 1 cut(s) 719
XspI CTAG 2 cut(s) 320, 1085
Zsp2I ATGCAT 1 cut(s) 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.