Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003541

Physical Location & Seq

Genomic Coordinates Forward (+)

41732151 .. 41735342

Gene Structure 3192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0341600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGTCGAAGGCTTCGAAGTCGGCGGCGTCCCCTTCAACCCCGATGGCTGGGGCCCACCGGATTCCGCCACCACCACAACCACCACCTCCAACCTCCCCCTCAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGAGAAGCTGGGCCGGATCGCCGACTGGACCCGCACCTTCAACAACCCGGCCCGGTCCAAAAACCCCTCCGACGCCGTCTTCGACTTCTCCAACGACGAGTCGTTCCCCGGTAACGCCGATGACGACTCCACCTTCCGCCTCGTCGACGGAAAACCGCCGCCGCGTCCGAAATTCGGCCCCAAGTGGAGGTTCCAGCAGCAGAGGCAGCTCCCTCACCGCCGCGACGAGGAGGTCGAGGCCAAGAAGCGCGAGGCTGAGAAGGAGAGGGCTCGCCGTGACCGGCTTTACAACATGAACAGATCCAATGTCAACATGCCCCGCCGTGAAGCCGCCGTGTTCAAATCGTCGGTGGATATCCAGCCGGAATGGAACATGCTGGATCAGATCCCGTTCTCGACCTTCTCCAAGCTCTCTTTCACTGTCCCTGAGCCGGAGGATCTCCTCTTCTGCGGCGCACTCGAGACATATGACCGAACCGTTGATCGAATCACGCCTAAGAATGAGCGCAGGCTGGAGCGGTTCAAGAACCGCAACTTCTTCAAGGTCACAACCACTGATGATCCAGTCATTCGCCGACTTGCAAATGAAGACAAGGCTACTGTTTTCGCCACTGATACGATCCTCTCAACCCTCATGTGTGCGCCGAGGTCAGTTTACTCTTGGGACATTGTGGTTCAGCGAGTTGGAAACAAGTTGTTCTTTGACAAGCGTGATGGCTCTCAGCTTGACTTGCTTTCGGTCCACGAGACCTCTCAGGAGCCCCTGCCCGAAGCCAAGGACGATATCAATTCAGCTTATTCATTGAGTGTTGAGGCTGCTTACATTAACCAGAATTTCTCTCAGCAGGTTTTGGTTAGAGATGGGAATAAGGTCACTTTCGAGGAGCCCAACCCATTTGCAAATGAAGGGGAGGAAGTTGCCTCTGTTGCTTATCGGTACAGAAGGTGGAAGCTGGACAGTGAGGTGTCCCTGGTTGCAAGGTGTGAGGTTCAGAGTGTTATGGAGGTTAACAACCAGAGGTCGTTTTTGACTCTGAATGCGCTCAATGAATTTGATCCTAAATATTCTGGTGTGGATTGGAGGCAGAAATTGGAGACTCAGAGGGGTGCTGTTTTGGCCAATGAGCTTAAGAACAATGCTAACAAGTTGGCTAAATGGACTGCACAAGCTCTATTGGCTGGTGCTGATATGATGAAGTTGGGTTATGTTTCAAGGGTTCATCCTCGTGATCACTTCAACCATGTGATTTTGGCTGTGAATGGATACAAGCCCAAGGAGTTTTCCTCGCAGATTAATCTGAACCAGGCCAGTATGTGGGGAATTGTAAAGTCTATTGTGGACTTGTGTATGAAACTGAAGGAGGGCAAGTATGTACTGGTGAAGGATCCATCTAAGCCACAAGTTAGAATATATGAGGTTCCACCAGATGCTTTTGAAAATGACTATGTGGAGGAACCACTACCAGAGGACGAGCAAGTTCAGCCCCCTACTGAGGATGGCCAAGGTGCAGAGCCAAATATTGCTGCAACTGATGTGGAGGATAAGGAGGTTGAAGCTCAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000150 GO:0000217 GO:0000280 GO:0000400 GO:0000707 GO:0000724 GO:0000725 GO:0000730 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0032991 GO:0033061 GO:0033063 GO:0033554 GO:0034622 GO:0034641 GO:0035825 GO:0042148 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045003 GO:0046483 GO:0048285 GO:0050896 GO:0051321 GO:0051716 GO:0061982 GO:0065003 GO:0065004 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

Rad51

Protein Analysis

565

Amino Acids

64.36

Weight (kDa)

5.25

Isoelectric Point (pI)

39.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF-3_zeta	PF05091	7 - 516	2.1e-196	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
NARG2_C	PF10505	354 - 517	9.3e-06	NMDA receptor-regulated gene protein 2 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003541)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28560 AT2G28560 AT2G28560 AT2G28560 AT2G28560 AT2G28560
fragaria_vesca	FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990
malus_domestica	MD11G1120900.v1.1
prunus_persica	Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1
pyrus_communis	pycom11g10220
rosa_chinensis	RchiOBHm_Chr5g0061521
rosa_laevigata	RLG00000035484
rosa_multiflora	Rmu_co8481717.1_g000001 Rmu_sc0006720.1_g000001 Rmu_sc0010824.1_g000011
rosa_roxburghii	Rroxscaffold_1G00019150
rosa_rugosa	Rorug05G0341400 Rorug05G0341500 Rorug05G0341600 Rorug05G0341700
rosa_samantha	Rh5AG403500 Rh5BG415700 Rh5CG440400 Rh5DG430200
rosa_wichuraiana	Rw5G037930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	362
Acc36I	ACCTGC	1 cut(s)	967
AccB7I	CCANNNNNTGG	1 cut(s)	1446
AccBSI	CCGCTC	2 cut(s)	129, 649
AccI	GTMKAC	1 cut(s)	276
AccII	CGCG	3 cut(s)	295, 354, 381
AcoI	YGGCCR	2 cut(s)	1248, 1630
AcsI	RAATTY	3 cut(s)	302, 964, 1181
AcuI	CTGAAG	1 cut(s)	1508
AcyI	GRCGYC	2 cut(s)	27, 204
AfaI	GTAC	2 cut(s)	1070, 1506
AfiI	CCNNNNNNNGG	7 cut(s)	48, 305, 318, 358, 562, 1446, 1624
AflII	CTTAAG	1 cut(s)	1259
AgsI	TTSAA	9 cut(s)	37, 172, 472, 655, 673, 1344, 1369, 1568, 1685
AjnI	CCWGG	2 cut(s)	1101, 1434
AjuI	GAANNNNNNNTTGG	4 cut(s)	305, 337, 530, 562
Alw26I	GTCTC	3 cut(s)	587, 872, 1220
Ama87I	CYCGRG	1 cut(s)	590
AoxI	GGCC	8 cut(s)	52, 142, 180, 307, 369, 1248, 1437, 1630
ApaI	GGGCCC	1 cut(s)	56
ApeKI	GCWGC	4 cut(s)	328, 337, 947, 1655
ApoI	RAATTY	3 cut(s)	302, 964, 1181
ArsI	GACNNNNNNTTYG	2 cut(s)	194, 226
AseI	ATTAAT	1 cut(s)	1425
AspLEI	GCGC	5 cut(s)	381, 587, 639, 775, 1174
AspS9I	GGNCC	8 cut(s)	52, 53, 142, 159, 181, 186, 308, 871
AsuC2I	CCSGG	3 cut(s)	179, 184, 240
AsuHPI	GGTGA	2 cut(s)	338, 1522
AsuII	TTCGAA	1 cut(s)	15
AvaI	CYCGRG	1 cut(s)	590
AvaII	GGWCC	3 cut(s)	159, 186, 871
BaeGI	GKGCMC	1 cut(s)	56
BalI	TGGCCA	2 cut(s)	1250, 1632
BamHI	GGATCC	1 cut(s)	1516
BanII	GRGCYC	4 cut(s)	56, 403, 894, 1020
BauI	CACGAG	2 cut(s)	875, 1356
BbsI	GAAGAC	2 cut(s)	202, 726
BbvI	GCAGC	4 cut(s)	340, 349, 934, 1642
BccI	CCATC	5 cut(s)	38, 839, 986, 1528, 1622
BceAI	ACGGC	4 cut(s)	191, 390, 438, 449
BciT130I	CCWGG	2 cut(s)	1103, 1436
BciVI	GTATCC	1 cut(s)	1388
BclI	TGATCA	1 cut(s)	1360
BcnI	CCSGG	3 cut(s)	179, 184, 240
BcoDI	GTCTC	3 cut(s)	587, 872, 1220
BfrI	CTTAAG	1 cut(s)	1259
BfuAI	ACCTGC	1 cut(s)	967
BfuI	GTATCC	1 cut(s)	1388
Bme1390I	CCNGG	5 cut(s)	179, 184, 240, 1103, 1436
Bme18I	GGWCC	3 cut(s)	159, 186, 871
BmeT110I	CYCGRG	1 cut(s)	590
BmgT120I	GGNCC	8 cut(s)	52, 53, 142, 159, 181, 186, 308, 871
BmrFI	CCNGG	5 cut(s)	179, 184, 240, 1103, 1436
BmsI	GCATC	1 cut(s)	1549
BpiI	GAAGAC	2 cut(s)	202, 726
BplI	GAGNNNNNCTC	2 cut(s)	1400, 1432
BpmI	CTGGAG	1 cut(s)	665
Bpu10I	CCTNAGC	1 cut(s)	558
Bpu14I	TTCGAA	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	1674
BpuMI	CCSGG	3 cut(s)	179, 184, 240
BsaHI	GRCGYC	2 cut(s)	27, 204
BsaI	GGTCTC	1 cut(s)	872
BsaJI	CCNNGG	6 cut(s)	238, 776, 906, 1101, 1404, 1633
BsaWI	WCCGGW	1 cut(s)	58
BsaXI	ACNNNNNCTCC	2 cut(s)	1484, 1514
Bsc4I	CCNNNNNNNGG	7 cut(s)	48, 305, 318, 358, 562, 1446, 1624
Bse118I	RCCGGY	1 cut(s)	411
Bse1I	ACTGG	4 cut(s)	161, 695, 1440, 1512
BseBI	CCWGG	2 cut(s)	1103, 1436
BseDI	CCNNGG	6 cut(s)	238, 776, 906, 1101, 1404, 1633
BseGI	GGATG	2 cut(s)	1351, 1633
BseLI	CCNNNNNNNGG	7 cut(s)	48, 305, 318, 358, 562, 1446, 1624
BseMII	CTCAG	7 cut(s)	378, 549, 866, 899, 986, 1244, 1614
BseNI	ACTGG	4 cut(s)	161, 695, 1440, 1512
BseRI	GAGGAG	3 cut(s)	374, 563, 1028
BseSI	GKGCMC	1 cut(s)	56
BseXI	GCAGC	4 cut(s)	340, 349, 934, 1642
BseYI	CCCAGC	2 cut(s)	48, 139
BsgI	GTGCAG	2 cut(s)	1278, 1659
Bsh1236I	CGCG	3 cut(s)	295, 354, 381
BshFI	GGCC	8 cut(s)	54, 144, 182, 309, 371, 1250, 1439, 1632
BsiHKCI	CYCGRG	1 cut(s)	590
BsiSI	CCGG	8 cut(s)	59, 145, 179, 184, 240, 412, 494, 563
BslFI	GGGAC	5 cut(s)	14, 92, 539, 809, 1084
BslI	CCNNNNNNNGG	7 cut(s)	48, 305, 318, 358, 562, 1446, 1624
BsmAI	GTCTC	3 cut(s)	587, 872, 1220
BsmFI	GGGAC	5 cut(s)	14, 92, 539, 809, 1084
BsmI	GAATGC	1 cut(s)	1174
BsnI	GGCC	8 cut(s)	54, 144, 182, 309, 371, 1250, 1439, 1632
Bso31I	GGTCTC	1 cut(s)	872
BsoBI	CYCGRG	1 cut(s)	590
Bsp119I	TTCGAA	1 cut(s)	15
Bsp120I	GGGCCC	1 cut(s)	52
Bsp1286I	GDGCHC	4 cut(s)	56, 403, 894, 1020
BspANI	GGCC	8 cut(s)	54, 144, 182, 309, 371, 1250, 1439, 1632
BspCNI	CTCAG	7 cut(s)	379, 550, 865, 898, 985, 1243, 1615
BspFNI	CGCG	3 cut(s)	295, 354, 381
BspMI	ACCTGC	1 cut(s)	967
BspT104I	TTCGAA	1 cut(s)	15
BspTI	CTTAAG	1 cut(s)	1259
BspTNI	GGTCTC	1 cut(s)	872
BsrBI	CCGCTC	2 cut(s)	129, 649
BsrFI	RCCGGY	1 cut(s)	411
BsrI	ACTGG	4 cut(s)	161, 695, 1440, 1512
BssAI	RCCGGY	1 cut(s)	411
BssECI	CCNNGG	6 cut(s)	238, 776, 906, 1101, 1404, 1633
BssNI	GRCGYC	2 cut(s)	27, 204
BssSI	CACGAG	2 cut(s)	875, 1356
BssT1I	CCWWGG	3 cut(s)	906, 1404, 1633
Bst2BI	CACGAG	2 cut(s)	875, 1356
Bst2UI	CCWGG	2 cut(s)	1103, 1436
Bst4CI	ACNGT	4 cut(s)	553, 610, 733, 1091
Bst6I	CTCTTC	1 cut(s)	581
BstACI	GRCGYC	2 cut(s)	27, 204
BstAFI	CTTAAG	1 cut(s)	1259
BstBI	TTCGAA	1 cut(s)	15
BstC8I	GCNNGC	2 cut(s)	403, 641
BstDEI	CTNAG	9 cut(s)	387, 558, 627, 852, 885, 972, 1230, 1524, 1623
BstF5I	GGATG	2 cut(s)	1351, 1633
BstFNI	CGCG	3 cut(s)	295, 354, 381
BstHHI	GCGC	5 cut(s)	381, 587, 639, 775, 1174
BstMAI	GTCTC	3 cut(s)	587, 872, 1220
BstMWI	GCNNNNNNNGC	7 cut(s)	334, 337, 862, 1058, 1247, 1307, 1612
BstNI	CCWGG	2 cut(s)	1103, 1436
BstNSI	RCATGY	2 cut(s)	448, 508
BstSCI	CCNGG	5 cut(s)	177, 182, 238, 1101, 1434
BstSLI	GKGCMC	1 cut(s)	56
BstUI	CGCG	3 cut(s)	295, 354, 381
BstV1I	GCAGC	4 cut(s)	340, 349, 934, 1642
BstV2I	GAAGAC	2 cut(s)	202, 726
BstX2I	RGATCY	4 cut(s)	431, 516, 568, 1516
BstYI	RGATCY	4 cut(s)	431, 516, 568, 1516
BsuI	GTATCC	1 cut(s)	1388
BsuRI	GGCC	8 cut(s)	54, 144, 182, 309, 371, 1250, 1439, 1632
BtsCI	GGATG	2 cut(s)	1351, 1633
BtsIMutI	CAGTG	4 cut(s)	549, 684, 741, 1096
BveI	ACCTGC	1 cut(s)	967
Cac8I	GCNNGC	2 cut(s)	403, 641
CfoI	GCGC	5 cut(s)	381, 587, 639, 775, 1174
Cfr10I	RCCGGY	1 cut(s)	411
Cfr13I	GGNCC	8 cut(s)	52, 53, 142, 159, 181, 186, 308, 871
CseI	GACGC	3 cut(s)	16, 212, 284
Csp6I	GTAC	2 cut(s)	1069, 1505
CspCI	CAANNNNNGTGG	2 cut(s)	1647, 1682
CviAII	CATG	5 cut(s)	424, 445, 505, 766, 1373
CviQI	GTAC	2 cut(s)	1069, 1505
DdeI	CTNAG	9 cut(s)	387, 558, 627, 852, 885, 972, 1230, 1524, 1623
DrdI	GACNNNNNNGTC	1 cut(s)	362
DseDI	GACNNNNNNGTC	1 cut(s)	362
EaeI	YGGCCR	2 cut(s)	1248, 1630
Eam1104I	CTCTTC	1 cut(s)	581
EarI	CTCTTC	1 cut(s)	581
EciI	GGCGGA	2 cut(s)	55, 257
Eco130I	CCWWGG	3 cut(s)	906, 1404, 1633
Eco24I	GRGCYC	4 cut(s)	56, 403, 894, 1020
Eco31I	GGTCTC	1 cut(s)	872
Eco32I	GATATC	2 cut(s)	487, 916
Eco47I	GGWCC	3 cut(s)	159, 186, 871
Eco57I	CTGAAG	1 cut(s)	1508
Eco88I	CYCGRG	1 cut(s)	590
EcoO109I	RGGNCCY	1 cut(s)	52
EcoRII	CCWGG	2 cut(s)	1101, 1434
EcoRV	GATATC	2 cut(s)	487, 916
EcoT14I	CCWWGG	3 cut(s)	906, 1404, 1633
EcoT38I	GRGCYC	4 cut(s)	56, 403, 894, 1020
ErhI	CCWWGG	3 cut(s)	906, 1404, 1633
FaeI	CATG	5 cut(s)	427, 448, 508, 769, 1376
FalI	AAGNNNNNCTT	2 cut(s)	815, 847
FaqI	GGGAC	5 cut(s)	14, 92, 539, 809, 1084
FatI	CATG	5 cut(s)	423, 444, 504, 765, 1372
FauI	CCCGC	3 cut(s)	134, 170, 458
FauNDI	CATATG	1 cut(s)	598
FbaI	TGATCA	1 cut(s)	1360
FblI	GTMKAC	1 cut(s)	276
FokI	GGATG	2 cut(s)	1338, 1640
FriOI	GRGCYC	4 cut(s)	56, 403, 894, 1020
GlaI	GCGC	5 cut(s)	380, 586, 638, 774, 1173
GsaI	CCCAGC	2 cut(s)	52, 143
GsuI	CTGGAG	1 cut(s)	665
HaeIII	GGCC	8 cut(s)	54, 144, 182, 309, 371, 1250, 1439, 1632
HapII	CCGG	8 cut(s)	59, 145, 179, 184, 240, 412, 494, 563
HgaI	GACGC	3 cut(s)	16, 212, 284
HhaI	GCGC	5 cut(s)	381, 587, 639, 775, 1174
Hin1I	GRCGYC	2 cut(s)	27, 204
Hin1II	CATG	5 cut(s)	427, 448, 508, 769, 1376
Hin6I	GCGC	5 cut(s)	379, 585, 637, 773, 1172
HinP1I	GCGC	5 cut(s)	379, 585, 637, 773, 1172
HincII	GTYRAC	3 cut(s)	277, 442, 1141
HindII	GTYRAC	3 cut(s)	277, 442, 1141
HindIII	AAGCTT	1 cut(s)	1692
HinfI	GANTC	6 cut(s)	62, 230, 257, 618, 1162, 1228
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	8 cut(s)	59, 145, 179, 184, 240, 412, 494, 563
HphI	GGTGA	2 cut(s)	338, 1522
Hpy166II	GTNNAC	6 cut(s)	277, 442, 787, 874, 1141, 1471
Hpy188I	TCNGA	8 cut(s)	133, 202, 300, 516, 1125, 1167, 1233, 1431
Hpy188III	TCNNGA	5 cut(s)	526, 592, 655, 887, 1358
Hpy8I	GTNNAC	6 cut(s)	277, 442, 787, 874, 1141, 1471
Hpy99I	CGWCG	6 cut(s)	206, 230, 278, 281, 359, 481
HpyCH4III	ACNGT	4 cut(s)	553, 610, 733, 1091
HpyCH4IV	ACGT	1 cut(s)	105
HpyCH4V	TGCA	6 cut(s)	713, 1031, 1109, 1295, 1640, 1658
HpyF10VI	GCNNNNNNNGC	7 cut(s)	334, 337, 862, 1058, 1247, 1307, 1612
HpyF3I	CTNAG	9 cut(s)	387, 558, 627, 852, 885, 972, 1230, 1524, 1623
HpySE526I	ACGT	1 cut(s)	105
Hsp92I	GRCGYC	2 cut(s)	27, 204
Hsp92II	CATG	5 cut(s)	427, 448, 508, 769, 1376
HspAI	GCGC	5 cut(s)	379, 585, 637, 773, 1172
Ksp22I	TGATCA	1 cut(s)	1360
KspAI	GTTAAC	1 cut(s)	1141
LmnI	GCTCC	5 cut(s)	134, 345, 646, 889, 1015
Lsp1109I	GCAGC	4 cut(s)	340, 349, 934, 1642
LweI	GCATC	1 cut(s)	1549
MaeII	ACGT	1 cut(s)	105
MaeIII	GTNAC	4 cut(s)	242, 407, 676, 1003
MbiI	CCGCTC	2 cut(s)	129, 649
MboII	GAAGA	4 cut(s)	202, 568, 661, 731
MflI	RGATCY	4 cut(s)	431, 516, 568, 1516
MhlI	GDGCHC	4 cut(s)	56, 403, 894, 1020
MlsI	TGGCCA	2 cut(s)	1250, 1632
MluCI	AATT	6 cut(s)	302, 919, 964, 1181, 1220, 1452
MluNI	TGGCCA	2 cut(s)	1250, 1632
MlyI	GAGTC	4 cut(s)	239, 251, 1156, 1222
MmeI	TCCRAC	4 cut(s)	114, 225, 246, 796
Mox20I	TGGCCA	2 cut(s)	1250, 1632
MscI	TGGCCA	2 cut(s)	1250, 1632
MseI	TTAA	5 cut(s)	957, 1140, 1260, 1425, 1696
MslI	CAYNNNNRTG	1 cut(s)	1356
Msp20I	TGGCCA	2 cut(s)	1250, 1632
MspCI	CTTAAG	1 cut(s)	1259
MspI	CCGG	8 cut(s)	59, 145, 179, 184, 240, 412, 494, 563
MspR9I	CCNGG	5 cut(s)	179, 184, 240, 1103, 1436
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	2 cut(s)	1103, 1436
MvnI	CGCG	3 cut(s)	295, 354, 381
MwoI	GCNNNNNNNGC	7 cut(s)	334, 337, 862, 1058, 1247, 1307, 1612
NciI	CCSGG	3 cut(s)	179, 184, 240
NdeI	CATATG	1 cut(s)	598
NlaIII	CATG	5 cut(s)	427, 448, 508, 769, 1376
NmeAIII	GCCGAG	1 cut(s)	801
NmuCI	GTSAC	3 cut(s)	407, 676, 1003
NspI	RCATGY	2 cut(s)	448, 508
NspV	TTCGAA	1 cut(s)	15
PaeR7I	CTCGAG	1 cut(s)	590
PcsI	WCGNNNNNNNCGW	4 cut(s)	12, 210, 252, 363
PctI	GAATGC	1 cut(s)	1174
PfeI	GAWTC	2 cut(s)	62, 618
PflFI	GACNNNGTC	1 cut(s)	206
PflMI	CCANNNNNTGG	1 cut(s)	1446
PleI	GAGTC	4 cut(s)	238, 251, 1156, 1222
PpsI	GAGTC	4 cut(s)	238, 251, 1156, 1222
PshBI	ATTAAT	1 cut(s)	1425
Psp6I	CCWGG	2 cut(s)	1101, 1434
PspFI	CCCAGC	2 cut(s)	48, 139
PspGI	CCWGG	2 cut(s)	1101, 1434
PspOMI	GGGCCC	1 cut(s)	52
PspPI	GGNCC	8 cut(s)	52, 53, 142, 159, 181, 186, 308, 871
PsuI	RGATCY	4 cut(s)	431, 516, 568, 1516
PsyI	GACNNNGTC	1 cut(s)	206
RsaI	GTAC	2 cut(s)	1070, 1506
RsaNI	GTAC	2 cut(s)	1069, 1505
RseI	CAYNNNNRTG	1 cut(s)	1356
SalI	GTCGAC	1 cut(s)	275
SaqAI	TTAA	5 cut(s)	957, 1140, 1260, 1425, 1696
Sau96I	GGNCC	8 cut(s)	52, 53, 142, 159, 181, 186, 308, 871
SchI	GAGTC	4 cut(s)	239, 251, 1156, 1222
ScrFI	CCNGG	5 cut(s)	179, 184, 240, 1103, 1436
SduI	GDGCHC	4 cut(s)	56, 403, 894, 1020
SfaNI	GCATC	1 cut(s)	1549
Sfr274I	CTCGAG	1 cut(s)	590
SfuI	TTCGAA	1 cut(s)	15
SgrDI	CGTCGACG	1 cut(s)	275
SinI	GGWCC	3 cut(s)	159, 186, 871
SlaI	CTCGAG	1 cut(s)	590
SmiMI	CAYNNNNRTG	1 cut(s)	1356
SmlI	CTYRAG	3 cut(s)	590, 1259, 1689
SmoI	CTYRAG	3 cut(s)	590, 1259, 1689
Sse9I	AATT	6 cut(s)	302, 919, 964, 1181, 1220, 1452
SspI	AATATT	2 cut(s)	1196, 1651
StyD4I	CCNGG	5 cut(s)	177, 182, 238, 1101, 1434
StyI	CCWWGG	3 cut(s)	906, 1404, 1633
TaaI	ACNGT	4 cut(s)	553, 610, 733, 1091
TaiI	ACGT	1 cut(s)	108
TaqI	TCGA	9 cut(s)	6, 15, 213, 276, 366, 527, 591, 616, 1011
TaqII	GACCGA	2 cut(s)	618, 859
TasI	AATT	6 cut(s)	302, 919, 964, 1181, 1220, 1452
TatI	WGTACW	1 cut(s)	1504
TauI	GCSGC	6 cut(s)	27, 292, 295, 354, 464, 585
TfiI	GAWTC	2 cut(s)	62, 618
Tru1I	TTAA	5 cut(s)	957, 1140, 1260, 1425, 1696
Tru9I	TTAA	5 cut(s)	957, 1140, 1260, 1425, 1696
TscAI	CASTG	4 cut(s)	556, 691, 748, 1096
TseFI	GTSAC	3 cut(s)	407, 676, 1003
TseI	GCWGC	4 cut(s)	328, 337, 947, 1655
Tsp45I	GTSAC	3 cut(s)	407, 676, 1003
TspDTI	ATGAA	8 cut(s)	440, 732, 921, 1050, 1194, 1340, 1340, 1496
TspGWI	ACGGA	1 cut(s)	294
TspRI	CASTG	4 cut(s)	556, 691, 748, 1096
Tth111I	GACNNNGTC	1 cut(s)	206
Van91I	CCANNNNNTGG	1 cut(s)	1446
Vha464I	CTTAAG	1 cut(s)	1259
VpaK11BI	GGWCC	3 cut(s)	159, 186, 871
VspI	ATTAAT	1 cut(s)	1425
XapI	RAATTY	3 cut(s)	302, 964, 1181
XceI	RCATGY	2 cut(s)	448, 508
XhoI	CTCGAG	1 cut(s)	590
XmiI	GTMKAC	1 cut(s)	276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.