DNA repair protein RAD51 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28560 AT2G28560 AT2G28560 AT2G28560 AT2G28560 AT2G28560 |
| fragaria_vesca | FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 FvH4_3g33990 |
| malus_domestica | MD11G1120900.v1.1 |
| prunus_persica | Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 Prupe.6G090900_v2.0.a1 |
| pyrus_communis | pycom11g10220 |
| rosa_chinensis | RchiOBHm_Chr5g0061521 |
| rosa_laevigata | RLG00000035484 |
| rosa_multiflora | Rmu_co8481717.1_g000001 Rmu_sc0006720.1_g000001 Rmu_sc0010824.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00019150 |
| rosa_rugosa | Rorug05G0341400 Rorug05G0341500 Rorug05G0341600 Rorug05G0341700 |
| rosa_samantha | Rh5AG403500 Rh5BG415700 Rh5CG440400 Rh5DG430200 |
| rosa_wichuraiana | Rw5G037930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 181 |
| AccII | CGCG | 1 cut(s) | 218 |
| AciI | CCGC | 9 cut(s) | 82, 94, 110, 131, 428, 537, 747, 1003, 1101 |
| AclWI | GGATC | 3 cut(s) | 47, 985, 998 |
| AcoI | YGGCCR | 1 cut(s) | 1098 |
| AcsI | RAATTY | 2 cut(s) | 563, 1022 |
| AcuI | CTGAAG | 1 cut(s) | 839 |
| AcyI | GRCGYC | 1 cut(s) | 210 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 212, 763 |
| AflIII | ACRYGT | 1 cut(s) | 638 |
| AgsI | TTSAA | 3 cut(s) | 686, 909, 1064 |
| AjiI | CACGTC | 1 cut(s) | 609 |
| AjnI | CCWGG | 2 cut(s) | 205, 735 |
| AleI | CACNNNNGTG | 1 cut(s) | 699 |
| Alw21I | GWGCWC | 2 cut(s) | 107, 696 |
| AlwI | GGATC | 3 cut(s) | 47, 985, 998 |
| AoxI | GGCC | 6 cut(s) | 162, 487, 738, 785, 1004, 1098 |
| ApeKI | GCWGC | 3 cut(s) | 246, 518, 718 |
| ApoI | RAATTY | 2 cut(s) | 563, 1022 |
| AseI | ATTAAT | 1 cut(s) | 572 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 951 |
| AspLEI | GCGC | 3 cut(s) | 218, 661, 973 |
| AspS9I | GGNCC | 3 cut(s) | 162, 487, 785 |
| AsuHPI | GGTGA | 2 cut(s) | 523, 698 |
| AsuII | TTCGAA | 1 cut(s) | 567 |
| BaeGI | GKGCMC | 1 cut(s) | 186 |
| BamHI | GGATCC | 1 cut(s) | 990 |
| BanI | GGYRCC | 1 cut(s) | 181 |
| BbsI | GAAGAC | 1 cut(s) | 505 |
| Bbv12I | GWGCWC | 2 cut(s) | 107, 696 |
| BbvI | GCAGC | 3 cut(s) | 233, 530, 730 |
| BccI | CCATC | 4 cut(s) | 228, 478, 860, 973 |
| BceAI | ACGGC | 1 cut(s) | 123 |
| BciT130I | CCWGG | 2 cut(s) | 207, 737 |
| BciVI | GTATCC | 1 cut(s) | 764 |
| BclI | TGATCA | 1 cut(s) | 70 |
| BfaI | CTAG | 2 cut(s) | 584, 731 |
| BfmI | CTRYAG | 1 cut(s) | 333 |
| BfuI | GTATCC | 1 cut(s) | 764 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 170, 337, 486 |
| BglII | AGATCT | 1 cut(s) | 193 |
| BisI | GCNGC | 6 cut(s) | 111, 247, 519, 719, 1004, 1101 |
| BlsI | GCNGC | 6 cut(s) | 112, 248, 520, 720, 1005, 1102 |
| Bme1390I | CCNGG | 2 cut(s) | 207, 737 |
| BmgBI | CACGTC | 1 cut(s) | 609 |
| BmgT120I | GGNCC | 3 cut(s) | 162, 487, 785 |
| BmiI | GGNNCC | 2 cut(s) | 183, 992 |
| BmrFI | CCNGG | 2 cut(s) | 207, 737 |
| BmsI | GCATC | 3 cut(s) | 292, 633, 857 |
| BpiI | GAAGAC | 1 cut(s) | 505 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 403, 435 |
| Bpu14I | TTCGAA | 1 cut(s) | 567 |
| BpuEI | CTTGAG | 1 cut(s) | 469 |
| Bsa29I | ATCGAT | 1 cut(s) | 885 |
| BsaHI | GRCGYC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 2 cut(s) | 320, 540 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 212, 763 |
| Bse118I | RCCGGY | 1 cut(s) | 844 |
| Bse1I | ACTGG | 3 cut(s) | 359, 783, 972 |
| Bse3DI | GCAATG | 1 cut(s) | 839 |
| BseBI | CCWGG | 2 cut(s) | 207, 737 |
| BseCI | ATCGAT | 1 cut(s) | 885 |
| BseDI | CCNNGG | 2 cut(s) | 320, 540 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 212, 763 |
| BseMI | GCAATG | 1 cut(s) | 839 |
| BseMII | CTCAG | 2 cut(s) | 393, 1020 |
| BseNI | ACTGG | 3 cut(s) | 359, 783, 972 |
| BseRI | GAGGAG | 1 cut(s) | 160 |
| BseSI | GKGCMC | 1 cut(s) | 186 |
| BseXI | GCAGC | 3 cut(s) | 233, 530, 730 |
| BseYI | CCCAGC | 2 cut(s) | 377, 791 |
| Bsh1236I | CGCG | 1 cut(s) | 218 |
| BshFI | GGCC | 6 cut(s) | 164, 489, 740, 787, 1006, 1100 |
| BshNI | GGYRCC | 1 cut(s) | 181 |
| BshVI | ATCGAT | 1 cut(s) | 885 |
| BsiHKAI | GWGCWC | 2 cut(s) | 107, 696 |
| BsiSI | CCGG | 1 cut(s) | 845 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 212, 763 |
| BsnI | GGCC | 6 cut(s) | 164, 489, 740, 787, 1006, 1100 |
| Bsp119I | TTCGAA | 1 cut(s) | 567 |
| Bsp1286I | GDGCHC | 3 cut(s) | 107, 186, 696 |
| Bsp143I | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| BspACI | CCGC | 9 cut(s) | 82, 94, 110, 131, 428, 537, 747, 1003, 1101 |
| BspANI | GGCC | 6 cut(s) | 164, 489, 740, 787, 1006, 1100 |
| BspCNI | CTCAG | 2 cut(s) | 394, 1021 |
| BspDI | ATCGAT | 1 cut(s) | 885 |
| BspFNI | CGCG | 1 cut(s) | 218 |
| BspLI | GGNNCC | 2 cut(s) | 183, 992 |
| BspPI | GGATC | 3 cut(s) | 47, 985, 998 |
| BspQI | GCTCTTC | 1 cut(s) | 95 |
| BspT104I | TTCGAA | 1 cut(s) | 567 |
| BspT107I | GGYRCC | 1 cut(s) | 181 |
| BsrDI | GCAATG | 1 cut(s) | 839 |
| BsrFI | RCCGGY | 1 cut(s) | 844 |
| BsrI | ACTGG | 3 cut(s) | 359, 783, 972 |
| BssAI | RCCGGY | 1 cut(s) | 844 |
| BssECI | CCNNGG | 2 cut(s) | 320, 540 |
| BssMI | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| BssNI | GRCGYC | 1 cut(s) | 210 |
| BssT1I | CCWWGG | 2 cut(s) | 320, 540 |
| Bst2UI | CCWGG | 2 cut(s) | 207, 737 |
| Bst4CI | ACNGT | 2 cut(s) | 17, 810 |
| Bst6I | CTCTTC | 2 cut(s) | 95, 115 |
| BstACI | GRCGYC | 1 cut(s) | 210 |
| BstBI | TTCGAA | 1 cut(s) | 567 |
| BstC8I | GCNNGC | 4 cut(s) | 622, 789, 825, 846 |
| BstDEI | CTNAG | 2 cut(s) | 402, 1029 |
| BstEII | GGTNACC | 1 cut(s) | 704 |
| BstFNI | CGCG | 1 cut(s) | 218 |
| BstHHI | GCGC | 3 cut(s) | 218, 661, 973 |
| BstKTI | GATC | 5 cut(s) | 55, 73, 155, 196, 993 |
| BstMBI | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 170, 337, 383, 486, 545, 727, 833 |
| BstNI | CCWGG | 2 cut(s) | 207, 737 |
| BstNSI | RCATGY | 1 cut(s) | 642 |
| BstPI | GGTNACC | 1 cut(s) | 704 |
| BstSCI | CCNGG | 2 cut(s) | 205, 735 |
| BstSFI | CTRYAG | 1 cut(s) | 333 |
| BstSLI | GKGCMC | 1 cut(s) | 186 |
| BstUI | CGCG | 1 cut(s) | 218 |
| BstV1I | GCAGC | 3 cut(s) | 233, 530, 730 |
| BstV2I | GAAGAC | 1 cut(s) | 505 |
| BstX2I | RGATCY | 3 cut(s) | 52, 193, 990 |
| BstYI | RGATCY | 3 cut(s) | 52, 193, 990 |
| Bsu15I | ATCGAT | 1 cut(s) | 885 |
| BsuI | GTATCC | 1 cut(s) | 764 |
| BsuRI | GGCC | 6 cut(s) | 164, 489, 740, 787, 1006, 1100 |
| BsuTUI | ATCGAT | 1 cut(s) | 885 |
| BtrI | CACGTC | 1 cut(s) | 609 |
| BtsIMutI | CAGTG | 2 cut(s) | 634, 1026 |
| Cac8I | GCNNGC | 4 cut(s) | 622, 789, 825, 846 |
| CfoI | GCGC | 3 cut(s) | 218, 661, 973 |
| Cfr10I | RCCGGY | 1 cut(s) | 844 |
| Cfr13I | GGNCC | 3 cut(s) | 162, 487, 785 |
| ClaI | ATCGAT | 1 cut(s) | 885 |
| CseI | GACGC | 2 cut(s) | 199, 724 |
| CviAII | CATG | 4 cut(s) | 639, 697, 872, 1096 |
| DdeI | CTNAG | 2 cut(s) | 402, 1029 |
| DpnI | GATC | 5 cut(s) | 54, 72, 154, 195, 992 |
| DpnII | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| EaeI | YGGCCR | 1 cut(s) | 1098 |
| Eam1104I | CTCTTC | 2 cut(s) | 95, 115 |
| EarI | CTCTTC | 2 cut(s) | 95, 115 |
| EciI | GGCGGA | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 2 cut(s) | 320, 540 |
| Eco147I | AGGCCT | 1 cut(s) | 740 |
| Eco57I | CTGAAG | 1 cut(s) | 839 |
| Eco91I | GGTNACC | 1 cut(s) | 704 |
| EcoO65I | GGTNACC | 1 cut(s) | 704 |
| EcoRI | GAATTC | 2 cut(s) | 563, 1022 |
| EcoRII | CCWGG | 2 cut(s) | 205, 735 |
| EcoT14I | CCWWGG | 2 cut(s) | 320, 540 |
| ErhI | CCWWGG | 2 cut(s) | 320, 540 |
| FaeI | CATG | 4 cut(s) | 642, 700, 875, 1099 |
| FatI | CATG | 4 cut(s) | 638, 696, 871, 1095 |
| FauI | CCCGC | 1 cut(s) | 421 |
| FbaI | TGATCA | 1 cut(s) | 70 |
| Fnu4HI | GCNGC | 6 cut(s) | 111, 247, 519, 719, 1004, 1101 |
| Fsp4HI | GCNGC | 6 cut(s) | 111, 247, 519, 719, 1004, 1101 |
| FspBI | CTAG | 2 cut(s) | 584, 731 |
| GlaI | GCGC | 3 cut(s) | 217, 660, 972 |
| GluI | GCNGC | 6 cut(s) | 111, 247, 519, 719, 1004, 1101 |
| GsaI | CCCAGC | 2 cut(s) | 381, 795 |
| HaeIII | GGCC | 6 cut(s) | 164, 489, 740, 787, 1006, 1100 |
| HapII | CCGG | 1 cut(s) | 845 |
| HgaI | GACGC | 2 cut(s) | 199, 724 |
| HhaI | GCGC | 3 cut(s) | 218, 661, 973 |
| Hin1I | GRCGYC | 1 cut(s) | 210 |
| Hin1II | CATG | 4 cut(s) | 642, 700, 875, 1099 |
| Hin6I | GCGC | 3 cut(s) | 216, 659, 971 |
| HinP1I | GCGC | 3 cut(s) | 216, 659, 971 |
| HindIII | AAGCTT | 3 cut(s) | 437, 546, 821 |
| HinfI | GANTC | 2 cut(s) | 255, 893 |
| HpaII | CCGG | 1 cut(s) | 845 |
| HphI | GGTGA | 2 cut(s) | 523, 698 |
| Hpy166II | GTNNAC | 1 cut(s) | 644 |
| Hpy188I | TCNGA | 7 cut(s) | 193, 263, 270, 301, 403, 444, 1021 |
| Hpy188III | TCNNGA | 2 cut(s) | 371, 1048 |
| Hpy8I | GTNNAC | 1 cut(s) | 644 |
| Hpy99I | CGWCG | 4 cut(s) | 170, 215, 263, 718 |
| HpyAV | CCTTC | 3 cut(s) | 121, 500, 1070 |
| HpyCH4III | ACNGT | 2 cut(s) | 17, 810 |
| HpyCH4IV | ACGT | 2 cut(s) | 510, 608 |
| HpyCH4V | TGCA | 5 cut(s) | 59, 230, 348, 827, 1039 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 170, 337, 383, 486, 545, 727, 833 |
| HpyF3I | CTNAG | 2 cut(s) | 402, 1029 |
| HpySE526I | ACGT | 2 cut(s) | 510, 608 |
| Hsp92I | GRCGYC | 1 cut(s) | 210 |
| Hsp92II | CATG | 4 cut(s) | 642, 700, 875, 1099 |
| HspAI | GCGC | 3 cut(s) | 216, 659, 971 |
| KroI | GCCGGC | 1 cut(s) | 844 |
| KroNI | GCCGGC | 1 cut(s) | 846 |
| Ksp22I | TGATCA | 1 cut(s) | 70 |
| Kzo9I | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| LguI | GCTCTTC | 1 cut(s) | 95 |
| LmnI | GCTCC | 3 cut(s) | 444, 673, 691 |
| Lsp1109I | GCAGC | 3 cut(s) | 233, 530, 730 |
| LweI | GCATC | 3 cut(s) | 292, 633, 857 |
| MaeI | CTAG | 2 cut(s) | 584, 731 |
| MaeII | ACGT | 2 cut(s) | 510, 608 |
| MaeIII | GTNAC | 3 cut(s) | 524, 604, 704 |
| MalI | GATC | 5 cut(s) | 54, 72, 154, 195, 992 |
| MboI | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| MboII | GAAGA | 5 cut(s) | 112, 132, 337, 444, 505 |
| MflI | RGATCY | 3 cut(s) | 52, 193, 990 |
| MhlI | GDGCHC | 3 cut(s) | 107, 186, 696 |
| MluCI | AATT | 5 cut(s) | 314, 563, 569, 924, 1022 |
| MlyI | GAGTC | 1 cut(s) | 249 |
| MmeI | TCCRAC | 2 cut(s) | 232, 241 |
| MroNI | GCCGGC | 1 cut(s) | 844 |
| MroXI | GAANNNNTTC | 1 cut(s) | 951 |
| MseI | TTAA | 1 cut(s) | 572 |
| MslI | CAYNNNNRTG | 1 cut(s) | 699 |
| MspI | CCGG | 1 cut(s) | 845 |
| MspR9I | CCNGG | 2 cut(s) | 207, 737 |
| MvaI | CCWGG | 2 cut(s) | 207, 737 |
| MvnI | CGCG | 1 cut(s) | 218 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 170, 337, 383, 486, 545, 727, 833 |
| NaeI | GCCGGC | 1 cut(s) | 846 |
| NdeII | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| NgoMIV | GCCGGC | 1 cut(s) | 844 |
| NlaIII | CATG | 4 cut(s) | 642, 700, 875, 1099 |
| NlaIV | GGNNCC | 2 cut(s) | 183, 992 |
| NmuCI | GTSAC | 2 cut(s) | 604, 704 |
| NspI | RCATGY | 1 cut(s) | 642 |
| NspV | TTCGAA | 1 cut(s) | 567 |
| OliI | CACNNNNGTG | 1 cut(s) | 699 |
| PceI | AGGCCT | 1 cut(s) | 740 |
| PciI | ACATGT | 1 cut(s) | 638 |
| PciSI | GCTCTTC | 1 cut(s) | 95 |
| PdiI | GCCGGC | 1 cut(s) | 846 |
| PdmI | GAANNNNTTC | 1 cut(s) | 951 |
| PfeI | GAWTC | 1 cut(s) | 893 |
| PkrI | GCNGC | 6 cut(s) | 112, 248, 520, 720, 1005, 1102 |
| PleI | GAGTC | 1 cut(s) | 249 |
| PpsI | GAGTC | 1 cut(s) | 249 |
| PscI | ACATGT | 1 cut(s) | 638 |
| PshBI | ATTAAT | 1 cut(s) | 572 |
| Psp6I | CCWGG | 2 cut(s) | 205, 735 |
| PspEI | GGTNACC | 1 cut(s) | 704 |
| PspFI | CCCAGC | 2 cut(s) | 377, 791 |
| PspGI | CCWGG | 2 cut(s) | 205, 735 |
| PspN4I | GGNNCC | 2 cut(s) | 183, 992 |
| PspPI | GGNCC | 3 cut(s) | 162, 487, 785 |
| PsuI | RGATCY | 3 cut(s) | 52, 193, 990 |
| RseI | CAYNNNNRTG | 1 cut(s) | 699 |
| SapI | GCTCTTC | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 572 |
| SatI | GCNGC | 6 cut(s) | 111, 247, 519, 719, 1004, 1101 |
| Sau3AI | GATC | 5 cut(s) | 52, 70, 152, 193, 990 |
| Sau96I | GGNCC | 3 cut(s) | 162, 487, 785 |
| SchI | GAGTC | 1 cut(s) | 249 |
| ScrFI | CCNGG | 2 cut(s) | 207, 737 |
| SduI | GDGCHC | 3 cut(s) | 107, 186, 696 |
| SfaNI | GCATC | 3 cut(s) | 292, 633, 857 |
| SfcI | CTRYAG | 1 cut(s) | 333 |
| SfuI | TTCGAA | 1 cut(s) | 567 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 699 |
| SmlI | CTYRAG | 1 cut(s) | 448 |
| SmoI | CTYRAG | 1 cut(s) | 448 |
| Sse9I | AATT | 5 cut(s) | 314, 563, 569, 924, 1022 |
| SseBI | AGGCCT | 1 cut(s) | 740 |
| SsiI | CCGC | 9 cut(s) | 82, 94, 110, 131, 428, 537, 747, 1003, 1101 |
| SspI | AATATT | 1 cut(s) | 951 |
| SspMI | CTAG | 2 cut(s) | 584, 731 |
| StuI | AGGCCT | 1 cut(s) | 740 |
| StyD4I | CCNGG | 2 cut(s) | 205, 735 |
| StyI | CCWWGG | 2 cut(s) | 320, 540 |
| TaaI | ACNGT | 2 cut(s) | 17, 810 |
| TaiI | ACGT | 2 cut(s) | 513, 611 |
| TaqI | TCGA | 3 cut(s) | 567, 713, 885 |
| TaqII | GACCGA | 1 cut(s) | 575 |
| TasI | AATT | 5 cut(s) | 314, 563, 569, 924, 1022 |
| TauI | GCSGC | 3 cut(s) | 113, 1006, 1103 |
| TfiI | GAWTC | 1 cut(s) | 893 |
| Tru1I | TTAA | 1 cut(s) | 572 |
| Tru9I | TTAA | 1 cut(s) | 572 |
| TscAI | CASTG | 2 cut(s) | 634, 1033 |
| TseFI | GTSAC | 2 cut(s) | 604, 704 |
| TseI | GCWGC | 3 cut(s) | 246, 518, 718 |
| Tsp45I | GTSAC | 2 cut(s) | 604, 704 |
| TspDTI | ATGAA | 3 cut(s) | 17, 42, 828 |
| TspRI | CASTG | 2 cut(s) | 634, 1033 |
| VspI | ATTAAT | 1 cut(s) | 572 |
| XapI | RAATTY | 2 cut(s) | 563, 1022 |
| XceI | RCATGY | 1 cut(s) | 642 |
| XmnI | GAANNNNTTC | 1 cut(s) | 951 |
| XspI | CTAG | 2 cut(s) | 584, 731 |