Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007812

Physical Location & Seq

Genomic Coordinates Reverse (-)

61143832 .. 61146804

Gene Structure 2973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0439800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGGTGTCGCTCTTTTTTCATTTGCTAGGCTCTTTGTTCTCTCTTTCATCACATTGGGTCTCATTCCTCAGCTAGCTCCTGCAAGCATAACAAGGCACTACAAATTTGATGTACAACTGCAAAATGTGACAAGGCTGTGCCATACGAAAAGCGTTGTAACCATAAACGGTCAATTTCCTGGGCCTCGAATTGTTGCTAGGGAGGGTGATCACCTCCTCATTAAAGTTGTTAACCATGTCCGAAGCAACATTTCCATCCATTGGCATGGAATTCGACAGCTTCGAACTGGGTGGGCTGATGGTCCAGCATACATTACCCAATGCCCAATACAAACCGGCAACAGCTATGTGTACAACTTCACCATTGTAGGCCAGAGGGGCACTCTTTGGTGGCATGCTCACATTTCATGGCTAAGATCAACCATCTATGGCCCCCTTATCATTCTTCCGAAGCGTGGTGTTCCTTATCCATTCACCAAACCCTATAAGGAAGTTCCCATCATCTTTGGAGAATGGTGGAATGCAGATCCTGAAGCAGTCATAAACCAGGCCTTGCAAACTGGGGGAGGACCAAATGTTTCTGATGCTTACACCATCAATGGACTCCCAGGGCCATTGTATAACTGCTCTGCCAAAGATACTTTCAAGCTAAAGGTTCAAGCTGGGAAGACATACCTTCTACGCCTAATCAATGCAGCGCTGAACGACGAGCTCTTCTTCAGCATTGCAAACCACACCCTCAAAGTGGTGGAAACTGATGCAGTTTACGTCAAACCCTTCGAGACCAACACCATTCTCATTGCCCCGGGACAAACCACAAATGTTCTTCTCAAAACAAAACCTAACTACCCAAACGCCACATTTTTCATGACTGCAAGGCCATACGTGACTGGTCTAGGCACCTTTGATAACTCCACTCTTGCTGGAATTTTAGAATACGAAATGACTACACTTCATTCAACCCTCCCAATGAACAAACTTCCACTCCACAAACCAATTCTCCCAGTTCTAAATGACACATCATTTGCAACAAAATTCGCCAACAAACTCCGTAGCTTGAACACTCCCCAGTTCCCTGCTAATGTTCCACAGAAAGTTGACAAGCATTTGTTCTTCACCATAGGGCTTGGAACCAACCCATGTAGCCAGCAGCAACACAACAACCAGACCTGCCAGGGACCGAATGGAACCATGTTTGCTGCTTCAATCAACAACATTTCTTTCACTATGCCAAACACTGCCCTACTCCAATCCCACTTCTTTGGCCAATCCAATGGGGTTTATTCCCCTAATTTTCCAATCAGTCCTTTAATTCCATTTAATTACACTGGAGCCCAGCTGAACAATACTAATGTGGGCAATGGTACTAAGCTAATGGTGCTTCCCTTTAACACTAGTGTGGAGTTGGTGTTGCAGGACACCAGTATTCTTGGTGCTGAAAGTCATCCTCTTCATCTTCATGGCTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGCAACTTCGACCAAAATGAGGACCCTAAGAAGTTCAATCTGATCGACCCTGTTGAGAGAAACACCGTGGGTGTGCCCTCCGGTGGGTGGGTTGCTATTCGGTTTCTAGCAGATAACCCGGGTGTATGGTTCATGCATTGCCACCTTGAGATCCATACTAGCTGGGGCTTGAAGATGGCTTGGGTAGTCTTAGATGGAAAGCTTCCCAATCAAAAGTTGCTTCCTCCTTCACCGGATCTGCCCAAATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000138 GO:0000139 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0006810 GO:0008150 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0031090 GO:0031984 GO:0031985 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Got1

Protein Analysis

581

Amino Acids

64.47

Weight (kDa)

9.19

Isoelectric Point (pI)

31.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 151	1.7e-42	Multicopper oxidase
Cu-oxidase	PF00394	164 - 314	1.1e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	439 - 563	2.7e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26550 AT4G26550 AT5G56020 AT5G56020
fragaria_vesca	FvH4_3g42200 FvH4_3g42200
malus_domestica	MD03G1036800.v1.1 MD11G1038000.v1.1 MD17G1169900.v1.1
prunus_persica	Prupe.6G028800_v2.0.a1 Prupe.8G243900_v2.0.a1
pyrus_communis	pycom03g02820 pycom11g03200
rosa_chinensis	RchiOBHm_Chr5g0075471
rosa_laevigata	RLG00000036566
rosa_multiflora	Rmu_sc0000770.1_g000003 Rmu_sc0042482.1_g000001
rosa_roxburghii	Rroxscaffold_1G00006030
rosa_rugosa	Rorug05G0439800
rosa_samantha	Rh5AG496900 Rh5BG518200 Rh5CG541700 Rh5DG531100
rosa_wichuraiana	Rw5G046090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1178
AccB1I	GGYRCC	1 cut(s)	899
AccB7I	CCANNNNNTGG	1 cut(s)	261
AclWI	GGATC	3 cut(s)	521, 1639, 1737
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	4 cut(s)	104, 270, 927, 1034
AcuI	CTGAAG	2 cut(s)	552, 703
AfaI	GTAC	3 cut(s)	114, 353, 1366
AfeI	AGCGCT	1 cut(s)	699
AfiI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1513, 1577, 1578, 1581
AgsI	TTSAA	7 cut(s)	646, 659, 960, 1060, 1206, 1531, 1666
AhlI	ACTAGT	1 cut(s)	1394
AjnI	CCWGG	4 cut(s)	178, 546, 607, 1173
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AleI	CACNNNNGTG	1 cut(s)	1397
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	2 cut(s)	65, 776
AlwI	GGATC	3 cut(s)	521, 1639, 1737
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	2 cut(s)	805, 1612
Aor51HI	AGCGCT	1 cut(s)	699
AoxI	GGCC	7 cut(s)	182, 370, 430, 549, 611, 878, 1264
ApeKI	GCWGC	3 cut(s)	695, 1150, 1199
ApoI	RAATTY	4 cut(s)	104, 270, 927, 1034
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AspLEI	GCGC	1 cut(s)	700
AspS9I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
AsuC2I	CCSGG	4 cut(s)	806, 807, 1613, 1614
AsuHPI	GGTGA	6 cut(s)	203, 218, 352, 466, 1108, 1716
AsuII	TTCGAA	1 cut(s)	283
AsuNHI	GCTAGC	1 cut(s)	73
AvaI	CYCGRG	2 cut(s)	805, 1612
AvaII	GGWCC	4 cut(s)	302, 569, 1178, 1516
BaeGI	GKGCMC	2 cut(s)	383, 1572
BalI	TGGCCA	1 cut(s)	1266
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	2 cut(s)	714, 1336
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	1 cut(s)	714
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	3 cut(s)	707, 1162, 1186
BccI	CCATC	7 cut(s)	263, 293, 431, 506, 602, 1663, 1682
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	4 cut(s)	180, 548, 609, 1175
BclI	TGATCA	1 cut(s)	208
BcnI	CCSGG	4 cut(s)	806, 807, 1613, 1614
BcoDI	GTCTC	2 cut(s)	65, 776
BcuI	ACTAGT	1 cut(s)	1394
BfaI	CTAG	7 cut(s)	27, 74, 198, 896, 1395, 1601, 1653
BfoI	RGCGCY	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1178
BglI	GCCNNNNNGGC	1 cut(s)	378
BisI	GCNGC	3 cut(s)	696, 1151, 1200
BlsI	GCNGC	3 cut(s)	697, 1152, 1201
Bme1390I	CCNGG	8 cut(s)	180, 548, 609, 806, 807, 1175, 1613, 1614
Bme18I	GGWCC	4 cut(s)	302, 569, 1178, 1516
BmeT110I	CYCGRG	2 cut(s)	805, 1612
BmgT120I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
BmiI	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
BmrFI	CCNGG	8 cut(s)	180, 548, 609, 806, 807, 1175, 1613, 1614
BmrI	ACTGGG	4 cut(s)	297, 570, 998, 1063
BmsI	GCATC	2 cut(s)	574, 748
BmtI	GCTAGC	1 cut(s)	77
BmuI	ACTGGG	4 cut(s)	297, 570, 998, 1063
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	2 cut(s)	367, 399
BpmI	CTGGAG	1 cut(s)	1350
Bpu10I	CCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	283
BpuEI	CTTGAG	1 cut(s)	1661
BpuMI	CCSGG	4 cut(s)	806, 807, 1613, 1614
BsaAI	YACGTR	1 cut(s)	886
BsaI	GGTCTC	2 cut(s)	65, 776
BsaJI	CCNNGG	8 cut(s)	179, 607, 608, 804, 805, 1174, 1560, 1612
BsaWI	WCCGGW	2 cut(s)	1574, 1726
BsaXI	ACNNNNNCTCC	6 cut(s)	969, 984, 999, 1014, 1394, 1424
Bsc4I	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1513, 1577, 1578, 1581
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1333, 1422
Bse3DI	GCAATG	4 cut(s)	723, 798, 1366, 1630
BseBI	CCWGG	4 cut(s)	180, 548, 609, 1175
BseDI	CCNNGG	8 cut(s)	179, 607, 608, 804, 805, 1174, 1560, 1612
BseGI	GGATG	2 cut(s)	255, 1444
BseLI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1513, 1577, 1578, 1581
BseMI	GCAATG	4 cut(s)	723, 798, 1366, 1630
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1333, 1422
BseRI	GAGGAG	1 cut(s)	206
BseSI	GKGCMC	2 cut(s)	383, 1572
BseXI	GCAGC	3 cut(s)	707, 1162, 1186
BseYI	CCCAGC	3 cut(s)	662, 1335, 1656
BshFI	GGCC	7 cut(s)	184, 372, 432, 551, 613, 880, 1266
BshNI	GGYRCC	1 cut(s)	899
BsiHKAI	GWGCWC	1 cut(s)	714
BsiHKCI	CYCGRG	2 cut(s)	805, 1612
BsiSI	CCGG	5 cut(s)	336, 806, 1575, 1613, 1727
BslFI	GGGAC	2 cut(s)	822, 1191
BslI	CCNNNNNNNGG	7 cut(s)	261, 455, 745, 1513, 1577, 1578, 1581
BsmAI	GTCTC	2 cut(s)	65, 776
BsmFI	GGGAC	2 cut(s)	822, 1191
BsmI	GAATGC	1 cut(s)	526
BsnI	GGCC	7 cut(s)	184, 372, 432, 551, 613, 880, 1266
Bso31I	GGTCTC	2 cut(s)	65, 776
BsoBI	CYCGRG	2 cut(s)	805, 1612
Bsp119I	TTCGAA	1 cut(s)	283
Bsp1286I	GDGCHC	4 cut(s)	383, 714, 1336, 1572
Bsp1407I	TGTACA	2 cut(s)	112, 351
Bsp143I	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
BspANI	GGCC	7 cut(s)	184, 372, 432, 551, 613, 880, 1266
BspCNI	CTCAG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	867
BspLI	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
BspMI	ACCTGC	1 cut(s)	1178
BspOI	GCTAGC	1 cut(s)	77
BspPI	GGATC	3 cut(s)	521, 1639, 1737
BspQI	GCTCTTC	1 cut(s)	719
BspT104I	TTCGAA	1 cut(s)	283
BspT107I	GGYRCC	1 cut(s)	899
BspTNI	GGTCTC	2 cut(s)	65, 776
BsrDI	GCAATG	4 cut(s)	723, 798, 1366, 1630
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	2 cut(s)	112, 351
BsrI	ACTGG	7 cut(s)	292, 565, 895, 1004, 1069, 1333, 1422
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	8 cut(s)	179, 607, 608, 804, 805, 1174, 1560, 1612
BssMI	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
Bst2UI	CCWGG	4 cut(s)	180, 548, 609, 1175
Bst4CI	ACNGT	2 cut(s)	170, 1561
Bst6I	CTCTTC	2 cut(s)	719, 1455
BstAUI	TGTACA	2 cut(s)	112, 351
BstBAI	YACGTR	1 cut(s)	886
BstBI	TTCGAA	1 cut(s)	283
BstC8I	GCNNGC	4 cut(s)	75, 85, 396, 1148
BstDEI	CTNAG	5 cut(s)	69, 413, 1368, 1521, 1684
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	2 cut(s)	255, 1444
BstH2I	RGCGCY	1 cut(s)	701
BstHHI	GCGC	1 cut(s)	700
BstKTI	GATC	6 cut(s)	211, 419, 529, 1539, 1647, 1732
BstMAI	GTCTC	2 cut(s)	65, 776
BstMBI	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
BstMWI	GCNNNNNNNGC	2 cut(s)	378, 1378
BstNI	CCWGG	4 cut(s)	180, 548, 609, 1175
BstNSI	RCATGY	1 cut(s)	398
BstSCI	CCNGG	8 cut(s)	178, 546, 607, 804, 805, 1173, 1611, 1612
BstSLI	GKGCMC	2 cut(s)	383, 1572
BstV1I	GCAGC	3 cut(s)	707, 1162, 1186
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	3 cut(s)	526, 1644, 1729
BstXI	CCANNNNNNTGG	3 cut(s)	266, 1262, 1274
BstYI	RGATCY	3 cut(s)	526, 1644, 1729
BsuRI	GGCC	7 cut(s)	184, 372, 432, 551, 613, 880, 1266
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	2 cut(s)	255, 1444
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	2 cut(s)	1236, 1326
BveI	ACCTGC	1 cut(s)	1178
Cac8I	GCNNGC	4 cut(s)	75, 85, 396, 1148
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	867
CfoI	GCGC	1 cut(s)	700
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
Cfr9I	CCCGGG	2 cut(s)	805, 1612
Csp6I	GTAC	3 cut(s)	113, 352, 1365
CviAII	CATG	9 cut(s)	236, 266, 395, 408, 868, 1140, 1192, 1460, 1627
CviQI	GTAC	3 cut(s)	113, 352, 1365
DdeI	CTNAG	5 cut(s)	69, 413, 1368, 1521, 1684
DpnI	GATC	6 cut(s)	210, 418, 528, 1538, 1646, 1731
DpnII	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
EaeI	YGGCCR	1 cut(s)	1264
Eam1104I	CTCTTC	2 cut(s)	719, 1455
EarI	CTCTTC	2 cut(s)	719, 1455
Ecl136II	GAGCTC	1 cut(s)	712
Eco147I	AGGCCT	1 cut(s)	551
Eco24I	GRGCYC	2 cut(s)	714, 1336
Eco31I	GGTCTC	2 cut(s)	65, 776
Eco47I	GGWCC	4 cut(s)	302, 569, 1178, 1516
Eco47III	AGCGCT	1 cut(s)	699
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	552, 703
Eco88I	CYCGRG	2 cut(s)	805, 1612
EcoICRI	GAGCTC	1 cut(s)	712
EcoO109I	RGGNCCY	1 cut(s)	1516
EcoRI	GAATTC	1 cut(s)	270
EcoRII	CCWGG	4 cut(s)	178, 546, 607, 1173
EcoT22I	ATGCAT	1 cut(s)	1632
EcoT38I	GRGCYC	2 cut(s)	714, 1336
FaeI	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1463, 1630
FaqI	GGGAC	2 cut(s)	822, 1191
FatI	CATG	9 cut(s)	235, 265, 394, 407, 867, 1139, 1191, 1459, 1626
FbaI	TGATCA	1 cut(s)	208
Fnu4HI	GCNGC	3 cut(s)	696, 1151, 1200
FokI	GGATG	2 cut(s)	242, 1431
FriOI	GRGCYC	2 cut(s)	714, 1336
Fsp4HI	GCNGC	3 cut(s)	696, 1151, 1200
FspBI	CTAG	7 cut(s)	27, 74, 198, 896, 1395, 1601, 1653
GlaI	GCGC	1 cut(s)	699
GluI	GCNGC	3 cut(s)	696, 1151, 1200
GsaI	CCCAGC	3 cut(s)	666, 1339, 1660
GsuI	CTGGAG	1 cut(s)	1350
HaeII	RGCGCY	1 cut(s)	701
HaeIII	GGCC	7 cut(s)	184, 372, 432, 551, 613, 880, 1266
HapII	CCGG	5 cut(s)	336, 806, 1575, 1613, 1727
HhaI	GCGC	1 cut(s)	700
Hin1II	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1463, 1630
Hin6I	GCGC	1 cut(s)	698
HinP1I	GCGC	1 cut(s)	698
HincII	GTYRAC	2 cut(s)	232, 1099
HindII	GTYRAC	2 cut(s)	232, 1099
HindIII	AAGCTT	1 cut(s)	1694
HinfI	GANTC	1 cut(s)	603
HpaI	GTTAAC	1 cut(s)	232
HpaII	CCGG	5 cut(s)	336, 806, 1575, 1613, 1727
HphI	GGTGA	6 cut(s)	203, 218, 352, 466, 1108, 1716
Hpy166II	GTNNAC	4 cut(s)	232, 352, 766, 1099
Hpy188I	TCNGA	4 cut(s)	242, 450, 583, 1536
Hpy188III	TCNNGA	3 cut(s)	530, 781, 868
Hpy8I	GTNNAC	4 cut(s)	232, 352, 766, 1099
Hpy99I	CGWCG	1 cut(s)	710
HpyAV	CCTTC	3 cut(s)	686, 787, 1731
HpyCH4III	ACNGT	2 cut(s)	170, 1561
HpyCH4IV	ACGT	2 cut(s)	768, 885
HpyF10VI	GCNNNNNNNGC	2 cut(s)	378, 1378
HpyF3I	CTNAG	5 cut(s)	69, 413, 1368, 1521, 1684
HpySE526I	ACGT	2 cut(s)	768, 885
Hsp92II	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1463, 1630
HspAI	GCGC	1 cut(s)	698
Ksp22I	TGATCA	1 cut(s)	208
KspAI	GTTAAC	1 cut(s)	232
Kzo9I	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
LguI	GCTCTTC	1 cut(s)	719
LmnI	GCTCC	2 cut(s)	82, 1331
Lsp1109I	GCAGC	3 cut(s)	707, 1162, 1186
LweI	GCATC	2 cut(s)	574, 748
MaeI	CTAG	7 cut(s)	27, 74, 198, 896, 1395, 1601, 1653
MaeII	ACGT	2 cut(s)	768, 885
MaeIII	GTNAC	3 cut(s)	127, 157, 886
MalI	GATC	6 cut(s)	210, 418, 528, 1538, 1646, 1731
MboI	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
MboII	GAAGA	9 cut(s)	437, 679, 706, 709, 818, 1105, 1442, 1448, 1678
MflI	RGATCY	3 cut(s)	526, 1644, 1729
MhlI	GDGCHC	4 cut(s)	383, 714, 1336, 1572
MlsI	TGGCCA	1 cut(s)	1266
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	1 cut(s)	597
Mox20I	TGGCCA	1 cut(s)	1266
Mph1103I	ATGCAT	1 cut(s)	1632
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	6 cut(s)	222, 231, 1310, 1320, 1389, 1467
MslI	CAYNNNNRTG	3 cut(s)	264, 1397, 1458
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	1339
MspI	CCGG	5 cut(s)	336, 806, 1575, 1613, 1727
MspR9I	CCNGG	8 cut(s)	180, 548, 609, 806, 807, 1175, 1613, 1614
Mva1269I	GAATGC	1 cut(s)	526
MvaI	CCWGG	4 cut(s)	180, 548, 609, 1175
MwoI	GCNNNNNNNGC	2 cut(s)	378, 1378
NciI	CCSGG	4 cut(s)	806, 807, 1613, 1614
NdeII	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
NheI	GCTAGC	1 cut(s)	73
NlaIII	CATG	9 cut(s)	239, 269, 398, 411, 871, 1143, 1195, 1463, 1630
NlaIV	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
NmuCI	GTSAC	2 cut(s)	127, 886
NsiI	ATGCAT	1 cut(s)	1632
NspI	RCATGY	1 cut(s)	398
NspV	TTCGAA	1 cut(s)	283
OliI	CACNNNNGTG	1 cut(s)	1397
PaeI	GCATGC	1 cut(s)	398
PagI	TCATGA	1 cut(s)	867
PasI	CCCWGGG	1 cut(s)	608
PceI	AGGCCT	1 cut(s)	551
PciSI	GCTCTTC	1 cut(s)	719
PcsI	WCGNNNNNNNCGW	1 cut(s)	280
PctI	GAATGC	1 cut(s)	526
PflMI	CCANNNNNTGG	1 cut(s)	261
PkrI	GCNGC	3 cut(s)	697, 1152, 1201
PleI	GAGTC	1 cut(s)	597
PpsI	GAGTC	1 cut(s)	597
Ppu21I	YACGTR	1 cut(s)	886
PpuMI	RGGWCCY	1 cut(s)	1516
Psp124BI	GAGCTC	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	1516
Psp6I	CCWGG	4 cut(s)	178, 546, 607, 1173
PspFI	CCCAGC	3 cut(s)	662, 1335, 1656
PspGI	CCWGG	4 cut(s)	178, 546, 607, 1173
PspN4I	GGNNCC	7 cut(s)	433, 901, 1132, 1179, 1189, 1333, 1518
PspPI	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
PspPPI	RGGWCCY	1 cut(s)	1516
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	3 cut(s)	526, 1644, 1729
PvuII	CAGCTG	1 cut(s)	1339
RsaI	GTAC	3 cut(s)	114, 353, 1366
RsaNI	GTAC	3 cut(s)	113, 352, 1365
RseI	CAYNNNNRTG	3 cut(s)	264, 1397, 1458
SacI	GAGCTC	1 cut(s)	714
SapI	GCTCTTC	1 cut(s)	719
SaqAI	TTAA	6 cut(s)	222, 231, 1310, 1320, 1389, 1467
SatI	GCNGC	3 cut(s)	696, 1151, 1200
Sau3AI	GATC	6 cut(s)	208, 416, 526, 1536, 1644, 1729
Sau96I	GGNCC	7 cut(s)	182, 302, 431, 569, 611, 1178, 1516
SchI	GAGTC	1 cut(s)	597
ScrFI	CCNGG	8 cut(s)	180, 548, 609, 806, 807, 1175, 1613, 1614
SduI	GDGCHC	4 cut(s)	383, 714, 1336, 1572
SfaNI	GCATC	2 cut(s)	574, 748
SfuI	TTCGAA	1 cut(s)	283
SinI	GGWCC	4 cut(s)	302, 569, 1178, 1516
SmaI	CCCGGG	2 cut(s)	807, 1614
SmiMI	CAYNNNNRTG	3 cut(s)	264, 1397, 1458
SmlI	CTYRAG	1 cut(s)	1640
SmoI	CTYRAG	1 cut(s)	1640
SpeI	ACTAGT	1 cut(s)	1394
SphI	GCATGC	1 cut(s)	398
SseBI	AGGCCT	1 cut(s)	551
SspMI	CTAG	7 cut(s)	27, 74, 198, 896, 1395, 1601, 1653
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	551
StyD4I	CCNGG	8 cut(s)	178, 546, 607, 804, 805, 1173, 1611, 1612
TaaI	ACNGT	2 cut(s)	170, 1561
TaiI	ACGT	2 cut(s)	771, 888
TaqI	TCGA	6 cut(s)	187, 274, 283, 780, 1503, 1539
TaqII	GACCGA	1 cut(s)	1195
TatI	WGTACW	2 cut(s)	112, 351
Tru1I	TTAA	6 cut(s)	222, 231, 1310, 1320, 1389, 1467
Tru9I	TTAA	6 cut(s)	222, 231, 1310, 1320, 1389, 1467
TscAI	CASTG	2 cut(s)	1243, 1333
TseFI	GTSAC	2 cut(s)	127, 886
TseI	GCWGC	3 cut(s)	695, 1150, 1199
Tsp45I	GTSAC	2 cut(s)	127, 886
TspDTI	ATGAA	9 cut(s)	9, 37, 396, 856, 944, 986, 1442, 1448, 1615
TspGWI	ACGGA	1 cut(s)	1040
TspMI	CCCGGG	2 cut(s)	805, 1612
TspRI	CASTG	2 cut(s)	1243, 1333
Van91I	CCANNNNNTGG	1 cut(s)	261
VpaK11BI	GGWCC	4 cut(s)	302, 569, 1178, 1516
XapI	RAATTY	4 cut(s)	104, 270, 927, 1034
XceI	RCATGY	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1181
XmaI	CCCGGG	2 cut(s)	805, 1612
XspI	CTAG	7 cut(s)	27, 74, 198, 896, 1395, 1601, 1653
Zsp2I	ATGCAT	1 cut(s)	1632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.