Rorug06G0163000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0014531
Physical Location & Seq
Forward (+)
23242681 .. 23244296
1616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0163000.1

Sequence Viewer

Length: 1455 bp
ATGGAGAACAGCTACTCCTACAACTCCTATCCGGACTCCGGCGGCTCGTCGCCGCGGTCGCGTGAGATCGACTTCGAGAACCCGCCGCCGTGGGAGGACCAGCAGAACCCGAACTACAAGGTCAAGTTCATGTGCAGCTACGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCACCTACACCGGCGGCGAGACCAAGATCCTCGCCGTCGAACGCACCATCAAGTTCTCCGTCCTCGTCGCCAGGCTCTCCGCCCTCTCCGACAGCGACGTGTCGTTCAAGTACCAGCTCCCCGGGGAAGACCTCGACGCCTTGATCTCCGTCACCAACGACGACGACCTCGAGCACATGATGCACGAGTACGATCGCCTCTACCGTGCCTCCGCCAGGCCCGCCAGGATGAGGCTGTTTATCTTCCCGGTCAATCACAGCGACAGTTTCGGGTCTGACAGGTCCTCCGATAGGGATCGCTTCGTCGAGGCTTTGAATTCGGGTCCAATTCCCGCGCCCGACCCGATTTCCAAGCCTCCCGTCGTCGTCCAAAATAACGTTGACTTCATCCCCGGTTGGGGCAAGCCCGGCGTTGCGGTAACGCCGCCTCCTCCGCCGACGCAGCCTACGGTGCCCGAGCACGTTGCGCCTCCGCCGGAGTTTCAAGTCAGATCAGGCCTCGGCGGCGACCGGGTCATCGGGTCGGATCCGGTAATGAACCCGGTGGAGTTTCAGAGGCAACTGCAGGACTTGCAGAGGCTGCAAATTGGAGATCAACCTGATCAACAGTACCGAAGAAAGAGCGATGACAACCTCGTCGGAGCAGGAGGAGGAGGCTACGGTGCCGCCGCCGGTGATTACTACATGCAGAAGGTGCCGGAAAAGCTTCCTCCGGTGACGATGCCTCAGCAGATTTCGGCTCCGGCGGGTTACTGGCCGGAGAAGCATGTAGCGGGCGGCGGATTTCAGGGGACGGTGACGGGAGCACCTGAACAGCAACAGCCTATGTACATGATCAGCGCAGGCGGAGGCGGTATGTATCACGCGCCGCCGATGGTGCGACCGGTGACCGCCCCAAACAGTCAAGGGTACTACCACATGCAGCAGCCTCCGCAGCAGCAGCAGCAGCAGCAACAGAGAATGGCTTCGGACGTTTACCGGGATCAGCCGGTGTACAGTGCTATACCGCAGCCGCAGCAACAGACGAGTAATCTACCGCCACAGCCGCCGAAGTACATGGCGACGTACGCCGAAACGGCGCCGTATACTCAGGTGGCGTATGATAGCGTAACGGGGAGGCAGGTGTACTATACTGCGCAGGGTGGTGGGGTTGTGCAGCCGCAGCAGGCGTACTCAGCAGTGGGGCCCGCTGCGGTTAGTGGCGAAATGCGAGTGGCGGGCGGGTTGAGCCCGGAGGGTAAGGTGGTGGGTTCAAAACTTCCGCAAACTTCCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

484

Amino Acids

52.91

Weight (kDa)

5.45

Isoelectric Point (pI)

54.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 56 - 142 3.2e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014531)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07150
fragaria_vesca FvH4_2g18740 FvH4_2g18740
malus_domestica MD05G1173200.v1.1
prunus_persica Prupe.8G200700_v2.0.a1
pyrus_communis pycom05g16000
rosa_chinensis RchiOBHm_Chr6g0284361
rosa_laevigata RLG00000012747
rosa_multiflora Rmu_sc0002698.1_g000002 Rmu_sc0018899.1_g000004
rosa_roxburghii Rroxscaffold_7G00184720
rosa_rugosa Rorug06G0163000
rosa_samantha Rh6AG275500 Rh6BG276100 Rh6CG277900 Rh6DG270700
rosa_wichuraiana Rw6G023720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1288
AasI GACNNNNNNGTC 1 cut(s) 812
Acc16I TGCGCA 1 cut(s) 1314
Acc36I ACCTGC 1 cut(s) 1288
AccB1I GGYRCC 4 cut(s) 628, 839, 871, 1255
AccI GTMKAC 1 cut(s) 1262
AccII CGCG 4 cut(s) 55, 61, 512, 1043
AccIII TCCGGA 1 cut(s) 31
AclI AACGTT 1 cut(s) 555
AclWI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1167
AcoI YGGCCR 1 cut(s) 932
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 2 cut(s) 315, 1256
AfiI CCNNNNNNNGG 6 cut(s) 38, 393, 408, 468, 574, 575
AflIII ACRYGT 1 cut(s) 276
AgeI ACCGGT 1 cut(s) 1060
AgsI TTSAA 4 cut(s) 286, 493, 662, 1431
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 3 cut(s) 248, 392, 401
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 5 cut(s) 12, 138, 178, 295, 883
AluI AGCT 5 cut(s) 12, 138, 178, 295, 883
Alw21I GWGCWC 3 cut(s) 354, 639, 985
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1167
AlwNI CAGNNNCTG 1 cut(s) 757
Ama87I CYCGRG 3 cut(s) 299, 347, 632
Aor13HI TCCGGA 1 cut(s) 31
AoxI GGCC 4 cut(s) 395, 673, 932, 1361
ApaI GGGCCC 1 cut(s) 1365
ApoI RAATTY 1 cut(s) 493
AsiGI ACCGGT 1 cut(s) 1060
Asp700I GAANNNNTTC 2 cut(s) 882, 1141
AspLEI GCGC 6 cut(s) 514, 646, 1019, 1045, 1258, 1315
AspS9I GGNCC 6 cut(s) 97, 396, 459, 500, 1361, 1362
AsuC2I CCSGG 9 cut(s) 300, 301, 425, 570, 585, 689, 719, 1157, 1409
AsuHPI GGTGA 6 cut(s) 172, 322, 863, 904, 985, 1075
AvaI CYCGRG 3 cut(s) 299, 347, 632
AvaII GGWCC 3 cut(s) 97, 459, 500
BaeGI GKGCMC 2 cut(s) 633, 1365
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 4 cut(s) 628, 839, 871, 1255
BanII GRGCYC 2 cut(s) 1365, 1409
BauI CACGAG 1 cut(s) 362
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 3 cut(s) 354, 639, 985
BbvCI CCTCAGC 1 cut(s) 903
BccI CCATC 2 cut(s) 233, 1045
BceAI ACGGC 5 cut(s) 73, 157, 197, 1243, 1269
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 3 cut(s) 250, 394, 403
BclI TGATCA 2 cut(s) 778, 1011
BcnI CCSGG 9 cut(s) 300, 301, 425, 570, 585, 689, 719, 1157, 1409
BcoDI GTCTC 1 cut(s) 191
BfmI CTRYAG 1 cut(s) 740
BfoI RGCGCY 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 1288
BglI GCCNNNNNGGC 2 cut(s) 681, 1253
Bme18I GGWCC 3 cut(s) 97, 459, 500
BmeT110I CYCGRG 3 cut(s) 299, 347, 632
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 6 cut(s) 97, 396, 459, 500, 1361, 1362
BmiI GGNNCC 9 cut(s) 501, 630, 705, 841, 873, 918, 1257, 1362, 1363
BmsI GCATC 2 cut(s) 348, 888
BpiI GAAGAC 1 cut(s) 312
Bpu10I CCTNAGC 1 cut(s) 903
BpuMI CCSGG 9 cut(s) 300, 301, 425, 570, 585, 689, 719, 1157, 1409
BsaBI GATNNNNATC 1 cut(s) 471
BsaHI GRCGYC 2 cut(s) 315, 1256
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 676
BsaWI WCCGGW 4 cut(s) 31, 706, 889, 1060
BsaXI ACNNNNNCTCC 7 cut(s) 29, 371, 401, 446, 476, 589, 619
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 393, 408, 468, 574, 575
Bse118I RCCGGY 4 cut(s) 188, 848, 1060, 1165
Bse1I ACTGG 1 cut(s) 935
Bse8I GATNNNNATC 1 cut(s) 471
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 3 cut(s) 250, 394, 403
BseDI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 676
BseGI GGATG 2 cut(s) 411, 564
BseJI GATNNNNATC 1 cut(s) 471
BseLI CCNNNNNNNGG 6 cut(s) 38, 393, 408, 468, 574, 575
BseMII CTCAG 3 cut(s) 917, 1280, 1365
BseNI ACTGG 1 cut(s) 935
BseRI GAGGAG 3 cut(s) 597, 840, 843
BseSI GKGCMC 2 cut(s) 633, 1365
BsgI GTGCAG 2 cut(s) 154, 1352
Bsh1236I CGCG 4 cut(s) 55, 61, 512, 1043
Bsh1285I CGRYCG 4 cut(s) 59, 373, 688, 1061
BshFI GGCC 4 cut(s) 397, 675, 934, 1363
BshNI GGYRCC 4 cut(s) 628, 839, 871, 1255
BshTI ACCGGT 1 cut(s) 1060
BsiEI CGRYCG 4 cut(s) 59, 373, 688, 1061
BsiHKAI GWGCWC 3 cut(s) 354, 639, 985
BsiHKCI CYCGRG 3 cut(s) 299, 347, 632
BsiWI CGTACG 1 cut(s) 1242
BslFI GGGAC 1 cut(s) 982
BslI CCNNNNNNNGG 6 cut(s) 38, 393, 408, 468, 574, 575
BsmAI GTCTC 1 cut(s) 191
BsmFI GGGAC 1 cut(s) 982
BsnI GGCC 4 cut(s) 397, 675, 934, 1363
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 3 cut(s) 299, 347, 632
Bsp120I GGGCCC 1 cut(s) 1361
Bsp1286I GDGCHC 6 cut(s) 354, 633, 639, 985, 1365, 1409
Bsp13I TCCGGA 1 cut(s) 31
Bsp1407I TGTACA 2 cut(s) 1005, 1170
BspANI GGCC 4 cut(s) 397, 675, 934, 1363
BspCNI CTCAG 3 cut(s) 916, 1279, 1364
BspEI TCCGGA 1 cut(s) 31
BspFNI CGCG 4 cut(s) 55, 61, 512, 1043
BspLI GGNNCC 9 cut(s) 501, 630, 705, 841, 873, 918, 1257, 1362, 1363
BspMAI CTGCAG 1 cut(s) 744
BspMI ACCTGC 1 cut(s) 1288
BspPI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1167
BspT107I GGYRCC 4 cut(s) 628, 839, 871, 1255
BspTNI GGTCTC 1 cut(s) 191
BsrFI RCCGGY 4 cut(s) 188, 848, 1060, 1165
BsrGI TGTACA 2 cut(s) 1005, 1170
BsrI ACTGG 1 cut(s) 935
BssAI RCCGGY 4 cut(s) 188, 848, 1060, 1165
BssECI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 676
BssNAI GTATAC 1 cut(s) 1263
BssNI GRCGYC 2 cut(s) 315, 1256
BssSI CACGAG 1 cut(s) 362
Bst1107I GTATAC 1 cut(s) 1263
Bst2BI CACGAG 1 cut(s) 362
Bst2UI CCWGG 3 cut(s) 250, 394, 403
Bst4CI ACNGT 8 cut(s) 383, 443, 628, 786, 839, 973, 1079, 1175
BstACI GRCGYC 2 cut(s) 315, 1256
BstAPI GCANNNNNTGC 4 cut(s) 358, 748, 757, 871
BstAUI TGTACA 2 cut(s) 1005, 1170
BstC8I GCNNGC 7 cut(s) 399, 581, 952, 1021, 1344, 1365, 1396
BstDEI CTNAG 3 cut(s) 903, 1266, 1351
BstDSI CCRYGG 2 cut(s) 53, 89
BstEII GGTNACC 1 cut(s) 1063
BstENI CCTNNNNNAGG 2 cut(s) 391, 466
BstF5I GGATG 2 cut(s) 411, 564
BstFNI CGCG 4 cut(s) 55, 61, 512, 1043
BstH2I RGCGCY 1 cut(s) 1259
BstHHI GCGC 6 cut(s) 514, 646, 1019, 1045, 1258, 1315
BstMAI GTCTC 1 cut(s) 191
BstMCI CGRYCG 4 cut(s) 59, 373, 688, 1061
BstNI CCWGG 3 cut(s) 250, 394, 403
BstNSI RCATGY 3 cut(s) 865, 947, 1099
BstPI GGTNACC 1 cut(s) 1063
BstSFI CTRYAG 1 cut(s) 740
BstSLI GKGCMC 2 cut(s) 633, 1365
BstUI CGCG 4 cut(s) 55, 61, 512, 1043
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 3 cut(s) 150, 204, 703
BstYI RGATCY 3 cut(s) 150, 204, 703
BstZ17I GTATAC 1 cut(s) 1263
BsuRI GGCC 4 cut(s) 397, 675, 934, 1363
BtgI CCRYGG 2 cut(s) 53, 89
BtgZI GCGATG 1 cut(s) 816
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 2 cut(s) 411, 564
BtsI GCAGTG 1 cut(s) 1362
BtsIMutI CAGTG 2 cut(s) 1180, 1362
BveI ACCTGC 1 cut(s) 1288
Cac8I GCNNGC 7 cut(s) 399, 581, 952, 1021, 1344, 1365, 1396
CaiI CAGNNNCTG 1 cut(s) 757
CfoI GCGC 6 cut(s) 514, 646, 1019, 1045, 1258, 1315
Cfr10I RCCGGY 4 cut(s) 188, 848, 1060, 1165
Cfr13I GGNCC 6 cut(s) 97, 396, 459, 500, 1361, 1362
Cfr42I CCGCGG 1 cut(s) 56
Cfr9I CCCGGG 1 cut(s) 299
CseI GACGC 2 cut(s) 323, 625
CspAI ACCGGT 1 cut(s) 1060
CviAII CATG 7 cut(s) 130, 355, 862, 944, 1009, 1096, 1234
DdeI CTNAG 3 cut(s) 903, 1266, 1351
DinI GGCGCC 1 cut(s) 1257
DrdI GACNNNNNNGTC 1 cut(s) 812
DseDI GACNNNNNNGTC 1 cut(s) 812
EaeI YGGCCR 1 cut(s) 932
EciI GGCGGA 6 cut(s) 247, 379, 600, 639, 972, 1038
Eco147I AGGCCT 1 cut(s) 675
Eco24I GRGCYC 2 cut(s) 1365, 1409
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 3 cut(s) 97, 459, 500
Eco88I CYCGRG 3 cut(s) 299, 347, 632
Eco91I GGTNACC 1 cut(s) 1063
EcoNI CCTNNNNNAGG 2 cut(s) 391, 466
EcoO109I RGGNCCY 2 cut(s) 459, 1361
EcoO65I GGTNACC 1 cut(s) 1063
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 3 cut(s) 248, 392, 401
EcoT38I GRGCYC 2 cut(s) 1365, 1409
EgeI GGCGCC 1 cut(s) 1257
EheI GGCGCC 1 cut(s) 1257
FaeI CATG 7 cut(s) 133, 358, 865, 947, 1012, 1099, 1237
FaqI GGGAC 1 cut(s) 982
FatI CATG 7 cut(s) 129, 354, 861, 943, 1008, 1095, 1233
FauI CCCGC 9 cut(s) 90, 167, 406, 517, 916, 943, 1372, 1387, 1391
FbaI TGATCA 2 cut(s) 778, 1011
FblI GTMKAC 1 cut(s) 1262
FokI GGATG 2 cut(s) 418, 551
FriOI GRGCYC 2 cut(s) 1365, 1409
FspI TGCGCA 1 cut(s) 1314
GlaI GCGC 6 cut(s) 513, 645, 1018, 1044, 1257, 1314
HaeII RGCGCY 1 cut(s) 1259
HaeIII GGCC 4 cut(s) 397, 675, 934, 1363
HgaI GACGC 2 cut(s) 323, 625
HhaI GCGC 6 cut(s) 514, 646, 1019, 1045, 1258, 1315
Hin1I GRCGYC 2 cut(s) 315, 1256
Hin1II CATG 7 cut(s) 133, 358, 865, 947, 1012, 1099, 1237
Hin6I GCGC 6 cut(s) 512, 644, 1017, 1043, 1256, 1313
HinP1I GCGC 6 cut(s) 512, 644, 1017, 1043, 1256, 1313
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 1 cut(s) 35
HphI GGTGA 6 cut(s) 172, 322, 863, 904, 985, 1075
Hpy166II GTNNAC 5 cut(s) 559, 1153, 1171, 1263, 1303
Hpy188I TCNGA 8 cut(s) 268, 454, 466, 668, 703, 732, 818, 1147
Hpy188III TCNNGA 2 cut(s) 32, 76
Hpy8I GTNNAC 5 cut(s) 559, 1153, 1171, 1263, 1303
HpyAV CCTTC 1 cut(s) 862
HpyCH4III ACNGT 8 cut(s) 383, 443, 628, 786, 839, 973, 1079, 1175
HpyCH4IV ACGT 5 cut(s) 276, 555, 639, 1149, 1241
HpyCH4V TGCA 8 cut(s) 135, 361, 742, 751, 760, 865, 1099, 1333
HpyF3I CTNAG 3 cut(s) 903, 1266, 1351
HpySE526I ACGT 5 cut(s) 276, 555, 639, 1149, 1241
Hsp92I GRCGYC 2 cut(s) 315, 1256
Hsp92II CATG 7 cut(s) 133, 358, 865, 947, 1012, 1099, 1237
HspAI GCGC 6 cut(s) 512, 644, 1017, 1043, 1256, 1313
KasI GGCGCC 1 cut(s) 1255
Kpn2I TCCGGA 1 cut(s) 31
Ksp22I TGATCA 2 cut(s) 778, 1011
KspI CCGCGG 1 cut(s) 56
LmnI GCTCC 4 cut(s) 300, 818, 922, 980
LweI GCATC 2 cut(s) 348, 888
MaeII ACGT 5 cut(s) 276, 555, 639, 1149, 1241
MaeIII GTNAC 7 cut(s) 328, 595, 892, 926, 973, 1063, 1285
MboII GAAGA 3 cut(s) 317, 412, 804
MflI RGATCY 3 cut(s) 150, 204, 703
MhlI GDGCHC 6 cut(s) 354, 633, 639, 985, 1365, 1409
MluCI AATT 3 cut(s) 493, 504, 762
Mly113I GGCGCC 1 cut(s) 1256
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 3 cut(s) 291, 681, 796
MroI TCCGGA 1 cut(s) 31
MroXI GAANNNNTTC 2 cut(s) 882, 1141
MspA1I CMGCKG 2 cut(s) 55, 1367
MvaI CCWGG 3 cut(s) 250, 394, 403
MvnI CGCG 4 cut(s) 55, 61, 512, 1043
NarI GGCGCC 1 cut(s) 1256
NciI CCSGG 9 cut(s) 300, 301, 425, 570, 585, 689, 719, 1157, 1409
NlaIII CATG 7 cut(s) 133, 358, 865, 947, 1012, 1099, 1237
NlaIV GGNNCC 9 cut(s) 501, 630, 705, 841, 873, 918, 1257, 1362, 1363
NmeAIII GCCGAG 1 cut(s) 657
NmuCI GTSAC 4 cut(s) 328, 892, 973, 1063
NsbI TGCGCA 1 cut(s) 1314
NspI RCATGY 3 cut(s) 865, 947, 1099
PaeR7I CTCGAG 1 cut(s) 347
PaqCI CACCTGC 1 cut(s) 1288
PceI AGGCCT 1 cut(s) 675
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 379
PdmI GAANNNNTTC 2 cut(s) 882, 1141
Pfl23II CGTACG 1 cut(s) 1242
PflFI GACNNNGTC 1 cut(s) 689
PinAI ACCGGT 1 cut(s) 1060
Ple19I CGATCG 1 cut(s) 373
PleI GAGTC 1 cut(s) 29
PluTI GGCGCC 1 cut(s) 1259
PpsI GAGTC 1 cut(s) 29
PpuMI RGGWCCY 1 cut(s) 459
Psp1406I AACGTT 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 248, 392, 401
PspEI GGTNACC 1 cut(s) 1063
PspGI CCWGG 3 cut(s) 248, 392, 401
PspLI CGTACG 1 cut(s) 1242
PspN4I GGNNCC 9 cut(s) 501, 630, 705, 841, 873, 918, 1257, 1362, 1363
PspOMI GGGCCC 1 cut(s) 1361
PspPI GGNCC 6 cut(s) 97, 396, 459, 500, 1361, 1362
PspPPI RGGWCCY 1 cut(s) 459
PspXI VCTCGAGB 1 cut(s) 347
PsrI GAACNNNNNNTAC 2 cut(s) 98, 130
PstI CTGCAG 1 cut(s) 744
PstNI CAGNNNCTG 1 cut(s) 757
PsuI RGATCY 3 cut(s) 150, 204, 703
PsyI GACNNNGTC 1 cut(s) 689
PvuI CGATCG 1 cut(s) 373
SacII CCGCGG 1 cut(s) 56
Sau96I GGNCC 6 cut(s) 97, 396, 459, 500, 1361, 1362
SchI GAGTC 1 cut(s) 29
SduI GDGCHC 6 cut(s) 354, 633, 639, 985, 1365, 1409
SfaNI GCATC 2 cut(s) 348, 888
SfcI CTRYAG 1 cut(s) 740
SfoI GGCGCC 1 cut(s) 1257
Sfr274I CTCGAG 1 cut(s) 347
Sfr303I CCGCGG 1 cut(s) 56
SgrAI CRCCGGYG 2 cut(s) 188, 848
SgrBI CCGCGG 1 cut(s) 56
SinI GGWCC 3 cut(s) 97, 459, 500
SlaI CTCGAG 1 cut(s) 347
SmaI CCCGGG 1 cut(s) 301
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
Sse9I AATT 3 cut(s) 493, 504, 762
SseBI AGGCCT 1 cut(s) 675
SspDI GGCGCC 1 cut(s) 1255
StuI AGGCCT 1 cut(s) 675
TaaI ACNGT 8 cut(s) 383, 443, 628, 786, 839, 973, 1079, 1175
TaiI ACGT 5 cut(s) 279, 558, 642, 1152, 1244
TaqI TCGA 6 cut(s) 69, 75, 216, 312, 348, 483
TasI AATT 3 cut(s) 493, 504, 762
TatI WGTACW 4 cut(s) 1005, 1170, 1230, 1302
TscAI CASTG 2 cut(s) 1180, 1362
TseFI GTSAC 4 cut(s) 328, 892, 973, 1063
Tsp45I GTSAC 4 cut(s) 328, 892, 973, 1063
TspDTI ATGAA 3 cut(s) 118, 553, 728
TspGWI ACGGA 3 cut(s) 226, 316, 1438
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 2 cut(s) 1180, 1362
Tth111I GACNNNGTC 1 cut(s) 689
VpaK11BI GGWCC 3 cut(s) 97, 459, 500
XagI CCTNNNNNAGG 2 cut(s) 391, 466
XapI RAATTY 1 cut(s) 493
XceI RCATGY 3 cut(s) 865, 947, 1099
XhoI CTCGAG 1 cut(s) 347
XmaI CCCGGG 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 1262
XmnI GAANNNNTTC 2 cut(s) 882, 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.