Rorug06G0192600

Serine-threonine protein kinase 19

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
31004780 .. 31005025
246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0192600.1

Sequence Viewer

Length: 246 bp
ATGCGGGGCTTCCGGGAAGCCCTGAGTTATGCTGAGTTGGTGGATTTAGGTTTTCATGGTTGTCCGTATACTAGGAGCGATTCTGAAACTAAGGTTCGGCTGGATAGGGTGGTGGTCACGACGGCTTGGCTTGATTGCTTTTCGCATTCCAGAGTGATCGTAGATGCCAATCTCGCCTCCACCCCTTCGTTCCCACCAGTAAATCGGATCACATTCCAATTTTGCTCCGAGTTAGTGCGAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

9.18

Weight (kDa)

6.7

Isoelectric Point (pI)

29.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 68
AciI CCGC 1 cut(s) 4
AclWI GGATC 1 cut(s) 215
AlwI GGATC 1 cut(s) 215
AsuC2I CCSGG 1 cut(s) 14
BceAI ACGGC 1 cut(s) 138
BcnI CCSGG 1 cut(s) 14
BfaI CTAG 1 cut(s) 72
Bme1390I CCNGG 1 cut(s) 14
BmrFI CCNGG 1 cut(s) 14
BmsI GCATC 1 cut(s) 154
BpuMI CCSGG 1 cut(s) 14
BsaBI GATNNNNATC 1 cut(s) 168
Bse1I ACTGG 1 cut(s) 197
Bse8I GATNNNNATC 1 cut(s) 168
BseJI GATNNNNATC 1 cut(s) 168
BseMII CTCAG 2 cut(s) 14, 24
BseNI ACTGG 1 cut(s) 197
BsiSI CCGG 1 cut(s) 13
BsmI GAATGC 1 cut(s) 145
Bsp143I GATC 2 cut(s) 156, 207
BspACI CCGC 1 cut(s) 4
BspCNI CTCAG 2 cut(s) 15, 25
BspPI GGATC 1 cut(s) 215
BsrI ACTGG 1 cut(s) 197
BssMI GATC 2 cut(s) 156, 207
BssNAI GTATAC 1 cut(s) 69
Bst1107I GTATAC 1 cut(s) 69
BstDEI CTNAG 3 cut(s) 23, 33, 90
BstKTI GATC 2 cut(s) 159, 210
BstMBI GATC 2 cut(s) 156, 207
BstMWI GCNNNNNNNGC 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 12
BstZ17I GTATAC 1 cut(s) 69
CviAII CATG 1 cut(s) 56
CviJI RGCY 5 cut(s) 9, 20, 100, 125, 130
CviKI_1 RGCY 5 cut(s) 9, 20, 100, 125, 130
DdeI CTNAG 3 cut(s) 23, 33, 90
DpnI GATC 2 cut(s) 158, 209
DpnII GATC 2 cut(s) 156, 207
FaeI CATG 1 cut(s) 59
FaiI YATR 3 cut(s) 30, 57, 69
FatI CATG 1 cut(s) 55
FblI GTMKAC 1 cut(s) 68
FspBI CTAG 1 cut(s) 72
HapII CCGG 1 cut(s) 13
Hin1II CATG 1 cut(s) 59
HinfI GANTC 2 cut(s) 80, 240
HpaII CCGG 1 cut(s) 13
Hpy166II GTNNAC 1 cut(s) 69
Hpy188I TCNGA 4 cut(s) 85, 207, 229, 245
Hpy188III TCNNGA 2 cut(s) 118, 150
Hpy8I GTNNAC 1 cut(s) 69
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 1 cut(s) 173
HpyF3I CTNAG 3 cut(s) 23, 33, 90
Hsp92II CATG 1 cut(s) 59
Kzo9I GATC 2 cut(s) 156, 207
LmnI GCTCC 2 cut(s) 75, 230
LpnPI CCDG 5 cut(s) 26, 35, 86, 163, 210
LweI GCATC 1 cut(s) 154
MaeI CTAG 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 115
MalI GATC 2 cut(s) 158, 209
MboI GATC 2 cut(s) 156, 207
MluCI AATT 1 cut(s) 218
MnlI CCTC 1 cut(s) 187
MspI CCGG 1 cut(s) 13
MspR9I CCNGG 1 cut(s) 14
Mva1269I GAATGC 1 cut(s) 145
MwoI GCNNNNNNNGC 1 cut(s) 173
NciI CCSGG 1 cut(s) 14
NdeII GATC 2 cut(s) 156, 207
NlaIII CATG 1 cut(s) 59
NmuCI GTSAC 1 cut(s) 115
PctI GAATGC 1 cut(s) 145
PfeI GAWTC 1 cut(s) 80
PfoI TCCNGGA 1 cut(s) 12
Sau3AI GATC 2 cut(s) 156, 207
ScrFI CCNGG 1 cut(s) 14
SetI ASST 2 cut(s) 52, 96
SfaNI GCATC 1 cut(s) 154
Sse9I AATT 1 cut(s) 218
SsiI CCGC 1 cut(s) 4
SspMI CTAG 1 cut(s) 72
StyD4I CCNGG 1 cut(s) 12
TasI AATT 1 cut(s) 218
TfiI GAWTC 1 cut(s) 80
TseFI GTSAC 1 cut(s) 115
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 1 cut(s) 44
TspGWI ACGGA 1 cut(s) 54
XmiI GTMKAC 1 cut(s) 68
XspI CTAG 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.